View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4177_low_7 (Length: 356)
Name: NF4177_low_7
Description: NF4177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4177_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 18 - 346
Target Start/End: Original strand, 7053984 - 7054319
Alignment:
| Q |
18 |
attttaatcgtacattttgttgtcctagtcacaagaccaaacaagcacttagtagaattaatattttgtttaacttaa-------atgaatgaatctaaa |
110 |
Q |
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| T |
7053984 |
attttaatcgtacattttgttgtcctagtcacaagaccaaacaagcacttagtagaattaatattttgtttaactttacttttagatgaatgaatctaaa |
7054083 |
T |
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| Q |
111 |
tatattttctgacttatgtatataaacataaacagttcttcattcaactaaattttaattaaaatcgatttaacataatttattcatttaaagtttaaga |
210 |
Q |
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| T |
7054084 |
tatattttctgacttatgtatataaacataaacagttcttcattcaactaaattttaattaaaatcaatttgacataatttattcatttaaagtttaaga |
7054183 |
T |
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| Q |
211 |
atatctctctatatgtgtgagaatttatcctattaataatatggagaaatgtagaaaaatatacataatctaacacaaaatgactttttacagccgagga |
310 |
Q |
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| T |
7054184 |
atatctctctatatgtgtgaaaatttatcctattaataatatggagaaatgtagaaaaatatacatattctaacacaaaatgactttttacagccgagga |
7054283 |
T |
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| Q |
311 |
cttaaaggcctagtggtcctgaagtgagtgatgatg |
346 |
Q |
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| T |
7054284 |
cttaaaggcctagtggtcctgaattgagtgatgatg |
7054319 |
T |
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