View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4179_low_2 (Length: 355)
Name: NF4179_low_2
Description: NF4179
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4179_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 337; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 1 - 337
Target Start/End: Complemental strand, 40935831 - 40935495
Alignment:
| Q |
1 |
tgagtgaggtattttatgtggttgcttagacatggaagactcatgaaaaattatcgtaaaatgcagaatgaaccttggcgctcccctctagtgatgttac |
100 |
Q |
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| T |
40935831 |
tgagtgaggtattttatgtggttgcttagacatggaagactcatgaaaaattatcgtaaaatgcagaatgaaccttggcgctcccctctagtgatgttac |
40935732 |
T |
|
| Q |
101 |
cgagatagagctacatgtattatgggattgctctcaatgcatggttgttggatcccagttgagggagttattttttcaactcgaatttgcaatagtggat |
200 |
Q |
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| T |
40935731 |
cgagatagagctacatgtattatgggattgctctcaatgcatggttgttggatcccagttgagggagttattttttcaactcgaatttgcaatagtggat |
40935632 |
T |
|
| Q |
201 |
caatttgaacttaaaaggagaggttgaaaggattgatatttctaacccgcaagcattttaggttactgcttgtcattccctctggaagtggtgaaataag |
300 |
Q |
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| T |
40935631 |
caatttgaacttaaaaggagaggttgaaaggattgatatttctaacccgcaagcattttaggttactgcttgtcattccctctggaagtggtgaaataag |
40935532 |
T |
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| Q |
301 |
gaagttcatgaagaaaattagctgagacccatgcgac |
337 |
Q |
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| T |
40935531 |
gaagttcatgaagaaaattagctgagacccatgcgac |
40935495 |
T |
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