View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4182_low_10 (Length: 248)

Name: NF4182_low_10
Description: NF4182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4182_low_10
NF4182_low_10
[»] chr1 (57 HSPs)
chr1 (97-179)||(30530286-30530368)
chr1 (97-179)||(41558095-41558177)
chr1 (99-179)||(34002209-34002289)
chr1 (97-179)||(33669710-33669792)
chr1 (95-179)||(4511662-4511746)
chr1 (96-179)||(52417633-52417716)
chr1 (97-179)||(33422106-33422188)
chr1 (97-179)||(44112556-44112638)
chr1 (98-175)||(8464401-8464478)
chr1 (96-179)||(5315313-5315396)
chr1 (98-179)||(50884658-50884739)
chr1 (107-179)||(40139215-40139287)
chr1 (95-175)||(44641788-44641868)
chr1 (95-179)||(50017308-50017392)
chr1 (88-179)||(8934412-8934503)
chr1 (93-178)||(10426835-10426921)
chr1 (97-179)||(24775077-24775159)
chr1 (100-179)||(52369001-52369080)
chr1 (97-179)||(45470726-45470808)
chr1 (99-148)||(21154356-21154405)
chr1 (103-179)||(15059726-15059802)
chr1 (99-179)||(51250180-51250260)
chr1 (100-175)||(29688876-29688951)
chr1 (96-179)||(49596343-49596426)
chr1 (94-168)||(51193016-51193091)
chr1 (97-179)||(42829195-42829277)
chr1 (97-179)||(49589859-49589941)
chr1 (98-179)||(7423116-7423197)
chr1 (99-179)||(6841893-6841973)
chr1 (87-179)||(48576382-48576474)
chr1 (96-143)||(39220333-39220380)
chr1 (93-147)||(24611978-24612032)
chr1 (99-175)||(33660151-33660227)
chr1 (102-163)||(52078539-52078600)
chr1 (99-179)||(4154684-4154764)
chr1 (127-179)||(19920864-19920916)
chr1 (96-147)||(34395805-34395857)
chr1 (96-179)||(1724120-1724203)
chr1 (104-179)||(5975639-5975714)
chr1 (98-129)||(9362917-9362948)
chr1 (105-148)||(44519173-44519216)
chr1 (102-179)||(7078391-7078469)
chr1 (99-144)||(26547371-26547417)
chr1 (105-179)||(38233375-38233449)
chr1 (98-179)||(42843231-42843313)
chr1 (134-179)||(5959490-5959535)
chr1 (126-179)||(26501397-26501450)
chr1 (126-179)||(29489275-29489328)
chr1 (94-175)||(38019387-38019467)
chr1 (98-179)||(44950309-44950390)
chr1 (98-130)||(9335989-9336021)
chr1 (103-179)||(10121863-10121939)
chr1 (103-135)||(11011888-11011920)
chr1 (99-131)||(12039615-12039647)
chr1 (127-179)||(18610872-18610924)
chr1 (103-147)||(44503547-44503591)
chr1 (100-179)||(52669669-52669749)
[»] chr6 (20 HSPs)
chr6 (89-179)||(7693417-7693507)
chr6 (98-179)||(30622126-30622207)
chr6 (98-175)||(19788964-19789041)
chr6 (97-179)||(30795982-30796064)
chr6 (99-175)||(27176063-27176139)
chr6 (96-179)||(2333477-2333560)
chr6 (97-179)||(3800696-3800784)
chr6 (96-179)||(1803971-1804055)
chr6 (105-179)||(9200212-9200286)
chr6 (97-179)||(14569269-14569351)
chr6 (98-175)||(28647323-28647400)
chr6 (96-179)||(23633211-23633294)
chr6 (99-179)||(6158669-6158749)
chr6 (95-135)||(28875239-28875279)
chr6 (104-179)||(26860509-26860584)
chr6 (98-176)||(33491843-33491922)
chr6 (94-179)||(1969728-1969814)
chr6 (98-179)||(3821506-3821587)
chr6 (99-179)||(12441629-12441710)
chr6 (127-179)||(17835714-17835766)
[»] chr7 (25 HSPs)
chr7 (98-179)||(17500799-17500880)
chr7 (98-179)||(17552334-17552415)
chr7 (99-175)||(49089053-49089129)
chr7 (98-179)||(27070557-27070638)
chr7 (98-179)||(27207675-27207756)
chr7 (99-179)||(30391248-30391328)
chr7 (95-175)||(31436523-31436602)
chr7 (99-179)||(47644811-47644891)
chr7 (100-179)||(5724140-5724219)
chr7 (86-179)||(12141986-12142079)
chr7 (87-179)||(37149351-37149444)
chr7 (94-180)||(37385116-37385203)
chr7 (105-179)||(40077357-40077432)
chr7 (98-179)||(10014842-10014924)
chr7 (97-147)||(36186781-36186831)
chr7 (98-175)||(21153158-21153235)
chr7 (96-167)||(8742497-8742569)
chr7 (99-179)||(31009529-31009609)
chr7 (96-179)||(24267533-24267616)
chr7 (105-179)||(26041412-26041487)
chr7 (97-147)||(45981304-45981354)
chr7 (130-179)||(10161850-10161899)
chr7 (97-178)||(23761170-23761251)
chr7 (99-175)||(18067814-18067890)
chr7 (127-179)||(44175647-44175699)
[»] chr3 (51 HSPs)
chr3 (11-98)||(1459128-1459216)
chr3 (98-179)||(622347-622428)
chr3 (98-179)||(2812383-2812464)
chr3 (95-179)||(11233916-11234000)
chr3 (99-179)||(44334690-44334770)
chr3 (97-179)||(4208115-4208197)
chr3 (98-175)||(18713709-18713786)
chr3 (107-180)||(37323768-37323841)
chr3 (96-176)||(42424336-42424416)
chr3 (95-179)||(47509032-47509116)
chr3 (96-175)||(22153970-22154049)
chr3 (100-179)||(26668942-26669021)
chr3 (98-179)||(23906874-23906956)
chr3 (97-179)||(35425559-35425641)
chr3 (100-179)||(12094280-12094359)
chr3 (97-179)||(23920399-23920481)
chr3 (98-135)||(3484891-3484928)
chr3 (99-179)||(12044642-12044723)
chr3 (99-179)||(53932279-53932360)
chr3 (99-179)||(54233389-54233470)
chr3 (128-179)||(1031345-1031396)
chr3 (97-135)||(46574287-46574325)
chr3 (103-145)||(53133841-53133883)
chr3 (126-179)||(28263647-28263700)
chr3 (98-175)||(40159714-40159791)
chr3 (99-172)||(43176304-43176377)
chr3 (126-179)||(50652490-50652543)
chr3 (107-175)||(2009760-2009828)
chr3 (99-179)||(39932245-39932325)
chr3 (96-175)||(43441776-43441856)
chr3 (96-179)||(43460490-43460574)
chr3 (98-177)||(47683894-47683974)
chr3 (96-135)||(24748733-24748772)
chr3 (97-179)||(27937066-27937149)
chr3 (96-146)||(31997937-31997988)
chr3 (96-135)||(38692224-38692263)
chr3 (96-175)||(51032512-51032591)
chr3 (91-169)||(51717553-51717632)
chr3 (138-180)||(3484858-3484900)
chr3 (121-179)||(12762854-12762912)
chr3 (137-179)||(38692253-38692295)
chr3 (97-147)||(42104550-42104600)
chr3 (97-179)||(46473230-46473312)
chr3 (114-179)||(31169464-31169529)
chr3 (126-179)||(34021379-34021432)
chr3 (126-179)||(35756082-35756135)
chr3 (138-179)||(44972835-44972876)
chr3 (128-180)||(11574655-11574707)
chr3 (99-179)||(37585533-37585612)
chr3 (96-179)||(44910806-44910890)
chr3 (98-175)||(55196405-55196486)
[»] scaffold0020 (1 HSPs)
scaffold0020 (97-179)||(156008-156090)
[»] chr5 (31 HSPs)
chr5 (99-179)||(3722965-3723045)
chr5 (97-175)||(18638728-18638806)
chr5 (87-179)||(30301312-30301404)
chr5 (98-179)||(34952293-34952374)
chr5 (100-179)||(39840593-39840672)
chr5 (98-179)||(27340971-27341052)
chr5 (98-179)||(42825216-42825297)
chr5 (98-178)||(20125493-20125573)
chr5 (99-173)||(8725307-8725379)
chr5 (96-179)||(33743219-33743302)
chr5 (99-175)||(3155108-3155184)
chr5 (97-179)||(16292137-16292219)
chr5 (105-179)||(21062884-21062958)
chr5 (98-179)||(31024893-31024974)
chr5 (102-153)||(19867499-19867550)
chr5 (97-179)||(14914472-14914554)
chr5 (103-179)||(2456128-2456204)
chr5 (96-179)||(17489450-17489534)
chr5 (93-179)||(33626521-33626607)
chr5 (98-179)||(4878162-4878243)
chr5 (96-179)||(8959262-8959346)
chr5 (95-179)||(33567124-33567208)
chr5 (99-175)||(36415951-36416027)
chr5 (96-179)||(26626705-26626788)
chr5 (100-175)||(32425058-32425133)
chr5 (97-175)||(39788606-39788685)
chr5 (133-180)||(42807409-42807456)
chr5 (102-148)||(31708465-31708511)
chr5 (97-135)||(32682044-32682082)
chr5 (98-178)||(22203810-22203891)
chr5 (115-179)||(41210418-41210483)
[»] chr4 (45 HSPs)
chr4 (98-179)||(11012227-11012308)
chr4 (93-179)||(42516736-42516822)
chr4 (99-179)||(34114006-34114086)
chr4 (98-179)||(4514153-4514234)
chr4 (102-179)||(10096634-10096711)
chr4 (96-179)||(42882556-42882640)
chr4 (97-179)||(11063976-11064058)
chr4 (99-175)||(45274369-45274445)
chr4 (98-165)||(8906352-8906419)
chr4 (97-179)||(18568701-18568784)
chr4 (99-179)||(40335879-40335956)
chr4 (98-170)||(31804218-31804291)
chr4 (97-179)||(1688315-1688397)
chr4 (99-180)||(20056483-20056565)
chr4 (98-148)||(41154161-41154211)
chr4 (99-179)||(2193697-2193778)
chr4 (94-179)||(13267362-13267447)
chr4 (102-179)||(17363332-17363409)
chr4 (98-179)||(35332806-35332887)
chr4 (107-179)||(40308535-40308605)
chr4 (98-145)||(4511948-4511995)
chr4 (96-179)||(22071600-22071683)
chr4 (128-179)||(31147333-31147384)
chr4 (98-176)||(34259931-34260010)
chr4 (102-179)||(25139848-25139926)
chr4 (98-179)||(33483993-33484075)
chr4 (99-179)||(15638232-15638313)
chr4 (138-179)||(19315008-19315049)
chr4 (98-135)||(19315040-19315077)
chr4 (96-160)||(4489685-4489749)
chr4 (99-179)||(5234360-5234440)
chr4 (99-179)||(29525960-29526040)
chr4 (139-179)||(46912728-46912768)
chr4 (96-179)||(44133633-44133716)
chr4 (99-144)||(19720529-19720575)
chr4 (98-179)||(20632535-20632617)
chr4 (133-179)||(29949596-29949642)
chr4 (105-179)||(39067850-39067924)
chr4 (126-179)||(8026680-8026733)
chr4 (99-179)||(32365555-32365636)
chr4 (126-179)||(36728538-36728591)
chr4 (98-147)||(38674005-38674054)
chr4 (107-147)||(27384310-27384350)
chr4 (95-143)||(29406922-29406970)
chr4 (99-147)||(50159068-50159116)
[»] chr8 (32 HSPs)
chr8 (99-179)||(8074614-8074694)
chr8 (96-179)||(27631049-27631132)
chr8 (98-179)||(41304870-41304951)
chr8 (96-147)||(11155768-11155819)
chr8 (96-179)||(29910098-29910181)
chr8 (110-179)||(5642290-5642359)
chr8 (110-179)||(5644231-5644300)
chr8 (96-171)||(34996246-34996321)
chr8 (105-179)||(323975-324049)
chr8 (98-179)||(2768266-2768347)
chr8 (99-175)||(5924916-5924993)
chr8 (98-178)||(7129636-7129716)
chr8 (101-179)||(37562031-37562110)
chr8 (97-179)||(42026474-42026556)
chr8 (90-179)||(154392-154481)
chr8 (99-175)||(5925161-5925238)
chr8 (103-175)||(30129515-30129588)
chr8 (96-172)||(35594653-35594723)
chr8 (97-179)||(2597046-2597129)
chr8 (92-147)||(10653665-10653720)
chr8 (97-179)||(43605555-43605638)
chr8 (98-175)||(10344434-10344512)
chr8 (98-148)||(11789904-11789954)
chr8 (96-179)||(28623008-28623094)
chr8 (98-175)||(11139002-11139080)
chr8 (125-179)||(20994973-20995027)
chr8 (91-145)||(34810520-34810574)
chr8 (99-160)||(9550312-9550373)
chr8 (115-179)||(6005046-6005110)
chr8 (95-179)||(23258134-23258218)
chr8 (99-175)||(40719533-40719609)
chr8 (99-175)||(41005870-41005946)
[»] scaffold0057 (1 HSPs)
scaffold0057 (105-178)||(21469-21542)
[»] chr2 (27 HSPs)
chr2 (98-179)||(546273-546354)
chr2 (97-179)||(7497878-7497960)
chr2 (99-177)||(10389323-10389401)
chr2 (99-168)||(2308213-2308282)
chr2 (98-179)||(42665700-42665781)
chr2 (99-179)||(36909732-36909812)
chr2 (99-179)||(35965684-35965764)
chr2 (100-178)||(6666123-6666201)
chr2 (98-155)||(42554900-42554957)
chr2 (99-179)||(11442774-11442854)
chr2 (98-134)||(34261912-34261948)
chr2 (105-179)||(40496452-40496526)
chr2 (103-179)||(12358415-12358492)
chr2 (99-179)||(10749568-10749648)
chr2 (99-179)||(15226946-15227026)
chr2 (99-135)||(25994235-25994271)
chr2 (127-179)||(33857319-33857371)
chr2 (96-179)||(43791676-43791760)
chr2 (138-177)||(25994205-25994244)
chr2 (98-144)||(31847669-31847716)
chr2 (100-175)||(36795836-36795911)
chr2 (98-179)||(10550346-10550428)
chr2 (133-179)||(29582303-29582349)
chr2 (97-179)||(38912488-38912570)
chr2 (99-179)||(30973879-30973960)
chr2 (126-179)||(44484572-44484625)
chr2 (99-135)||(44411038-44411074)
[»] scaffold0238 (1 HSPs)
scaffold0238 (96-179)||(16493-16576)
[»] scaffold0194 (1 HSPs)
scaffold0194 (102-179)||(29702-29779)
[»] scaffold0154 (1 HSPs)
scaffold0154 (102-179)||(4417-4493)
[»] scaffold0111 (1 HSPs)
scaffold0111 (99-179)||(36757-36837)
[»] scaffold0072 (1 HSPs)
scaffold0072 (97-179)||(14436-14518)
[»] scaffold0024 (2 HSPs)
scaffold0024 (96-155)||(59702-59761)
scaffold0024 (133-179)||(60569-60615)


Alignment Details
Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 30530286 - 30530368
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  30530286 aagagtagtgatatatgtacaaccatttgggacaactttgatgacaactttcattttctctcttcttattggtccaaaacaat 30530368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 41558177 - 41558095
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||| |||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||| ||||||||    
T  41558177 aagagtagtgatatttgtacaaccatttgtgacaactattgtgacaactttccttttctttcttcttattggtcaaaaacaat 41558095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 34002209 - 34002289
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||| |||||| |||||||||||||||||||||||    
T  34002209 gagtagtgatatatgtacaactatttgggacaactttgatcacaactttcattttctctcttcttattggtccaaaacaat 34002289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 33669710 - 33669792
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| || |||| | |||||| ||||||||||||||||    
T  33669710 aagagtagtgatatatgtacaaccatttgggacaactttgatgacaactctcattttttctcttctcattggtccaaaacaat 33669792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 95 - 179
Target Start/End: Original strand, 4511662 - 4511746
Alignment:
Q  95 taaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||||| |||| | |||||| ||||||||||||||||    
T  4511662 taaagagtaatgatatatgtacaaccatttgggacaacttagatgacaactttcattttttctcttctcattggtccaaaacaat 4511746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 52417716 - 52417633
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||| |||||| |||||  ||||||||||||| ||||||| |||||| |||||||||||||||||||||||    
T  52417716 aaagagtagtgatatatatacaactatttggaacaactttgatgataactttcattttctctcttcttattggtccaaaacaat 52417633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 33422106 - 33422188
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||  |||||||||||||||||||||| ||||||||||  |||||| |||||| ||||||||||||||||    
T  33422106 aagagtagtgatatattgacaaccatttgtgacaactttgttgacaacttttattttctctcttctcattggtccaaaacaat 33422188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 44112638 - 44112556
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||  |||||||||||||||||||||| ||||||||||  |||||| |||||| ||||||||||||||||    
T  44112638 aagagtagtgatatattgacaaccatttgtgacaactttgttgacaacttttattttctctcttctcattggtccaaaacaat 44112556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 8464401 - 8464478
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    |||||||||||||||||||||||| ||| | |||||||||||||||||||| |||||| |||| ||||||||||||||    
T  8464401 agagtagtgatatatgtacaaccacttgggccaactttgatgacaactttcattttctctctttttattggtccaaaa 8464478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 5315396 - 5315313
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||| |||||| |||||| | ||||||||||| |||||||||    
T  5315396 aaagagtagtgctatatgtacaaccattttagacaactttgatgacgactttcattttctcttttcttattggttcaaaacaat 5315313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 50884658 - 50884739
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||||||||||||||  ||||||||||||| ||||||| ||| || |||||| ||| ||||||||||||    
T  50884658 agagtagtgatatatgtacaaccatttggtacaactttgatgaaaactttcatttgctatcttctcattagtccaaaacaat 50884739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 40139287 - 40139215
Alignment:
Q  107 atatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||| ||||||||||| |||||||||||||||| |||||| |||||| ||| ||||||||||||    
T  40139287 atatatgtacaactatttgtgacaagtttgatgacaactttcattttctctcttctcatttgtccaaaacaat 40139215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 175
Target Start/End: Original strand, 44641788 - 44641868
Alignment:
Q  95 taaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    ||||||||||||||||||  |||||||||||||| ||||||| ||||||||||  |||||| |||||| ||||||||||||    
T  44641788 taaagagtagtgatatattgacaaccatttgtgataactttgttgacaacttttattttctctcttctcattggtccaaaa 44641868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 179
Target Start/End: Original strand, 50017308 - 50017392
Alignment:
Q  95 taaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||| ||||||||||||||||||||| |||||||||| ||| |||||||  ||||| |||| | ||||||||||||||||    
T  50017308 taaagagtactgatatatgtacaaccatttgagacaactttgttgataactttcaatttctctcttttcattggtccaaaacaat 50017392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 8934412 - 8934503
Alignment:
Q  88 attttaataaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||| || |||||||||||||| || ||||||||||||||||| ||  |||||||||||| |||||| | |||||||||||| ||||||||    
T  8934412 attttcatcaagagtagtgatatttgaacaaccatttgtgacaatttctatgacaactttctttttctcttttcttattggtcaaaaacaat 8934503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 178
Target Start/End: Complemental strand, 10426921 - 10426835
Alignment:
Q  93 aataaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttc-ttcttattggtccaaaacaa 178  Q
    |||||||||||||||||| ||||||||||| |||||||||||| |||||||| || ||||||| || || ||||||||| |||||||    
T  10426921 aataaagagtagtgatatttgtacaaccatgtgtgacaacttttatgacaaccttacttttctctcttttttattggtcgaaaacaa 10426835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 24775159 - 24775077
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||  |||||||||| ||||||||||| |||||| |||  |||||| |||||| ||||||||||||||||    
T  24775159 aagagtagtgatatattgacaaccatttttgacaactttgttgacaatttttattttctctcttctcattggtccaaaacaat 24775077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 179
Target Start/End: Original strand, 52369001 - 52369080
Alignment:
Q  100 agtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||||||| ||||   ||||||||||||||||||||| ||| || | |||| ||||||||||||||||    
T  52369001 agtagtgatatatgtacaactatttagtacaactttgatgacaactttcatttgctctattctcattggtccaaaacaat 52369080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 45470726 - 45470808
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||| |||| || |||||| |||||  | ||||||||| ||||||||| |||||| |||||||||||||||||||||||    
T  45470726 aagagtagcgataaatttacaactatttggaaaaactttgatcacaactttcattttctctcttcttattggtccaaaacaat 45470808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 21154405 - 21154356
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttc 148  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  21154405 gagtagtgatatatgtacaaccatttgatacaactttgatgacaactttc 21154356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 179
Target Start/End: Complemental strand, 15059802 - 15059726
Alignment:
Q  103 agtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||| |||||||| |||||| ||||| ||||||||||| |||| |||||| |||||| ||| ||||||||||||    
T  15059802 agtgatacatgtacaatcatttgggacaattttgatgacaattttcattttctctcttctcatttgtccaaaacaat 15059726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 51250180 - 51250260
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||| |||||||||||||| ||||||  | ||||||||||||||||||  |||||| ||||||||||| || ||||||||    
T  51250180 gagtactgatatatgtacaatcatttgaaataactttgatgacaacttttattttctctcttcttattgatctaaaacaat 51250260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 175
Target Start/End: Complemental strand, 29688951 - 29688876
Alignment:
Q  100 agtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    ||||||||| |||||||||||||||  ||| | |||||||||||||||| ||||  ||||||| ||||||||||||    
T  29688951 agtagtgatttatgtacaaccatttaggacgattttgatgacaactttcatttttcttcttctcattggtccaaaa 29688876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 49596426 - 49596343
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||| |||||||||||||||||||||  ||||||||||||| ||||||  ||| ||   |||| ||||||||||||||||    
T  49596426 aaagagtaatgatatatgtacaaccatttggtacaactttgatgataactttaatttgctccattctcattggtccaaaacaat 49596343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 168
Target Start/End: Original strand, 51193016 - 51193091
Alignment:
Q  94 ataaagagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattgg 168  Q
    |||| ||||||||||||||||||| ||||||| |||||||||| |||||||| ||  |||||| ||||||||||||    
T  51193016 ataatgagtagtgatatatgtacatccatttgatgacaactttcatgacaacattgtttttctctcttcttattgg 51193091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 42829195 - 42829277
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||| ||||||||||||| | |||| |||| |||||||  | ||||||| |||||||||||||  ||||||||    
T  42829195 aagagtagtgatatttgtacaaccatttataacaattttggtgacaacccttcttttctctcttcttattggtaaaaaacaat 42829277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 49589859 - 49589941
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||  | ||| |||||||||||||||| ||||||||||  |||||| |||||| ||||||| | ||||||    
T  49589859 aagagtagtgatatattgataactatttgtgacaactttgttgacaacttttattttctctcttctcattggtctataacaat 49589941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 7423197 - 7423116
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||| | |||||| |||| | ||||||||  ||||||| |||||||||| | |||||||||||| ||||||||    
T  7423197 agagtagtgatatttatacaactatttttaacaacttttgtgacaaccttccttttctcttttcttattggtcaaaaacaat 7423116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 6841973 - 6841893
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||| |||||| || ||||| |||| |||||||| | |||||||||||| |||||| |||| ||||||||| ||||||||    
T  6841973 gagtactgatatttgaacaactatttttgacaactatcatgacaactttctttttctctctttttattggtcaaaaacaat 6841893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 48576382 - 48576474
Alignment:
Q  87 tattttaataaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||| |||| ||||| |||||||| |||||||| || |||||||||||| ||||||||| || | | || ||||  |||||||||||||||||    
T  48576382 tattataattaagagaagtgatatttgtacaactatgtgtgacaacttttatgacaactatcatgtgctctctttctattggtccaaaacaat 48576474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 143
Target Start/End: Complemental strand, 39220380 - 39220333
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaa 143  Q
    |||||||||||||||||  |||||||||||||||||||||| ||||||    
T  39220380 aaagagtagtgatatattgacaaccatttgtgacaactttgttgacaa 39220333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 147
Target Start/End: Complemental strand, 24612032 - 24611978
Alignment:
Q  93 aataaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaacttt 147  Q
    |||||||||| ||||||| ||||||||||| | | ||||||||||||||||||||    
T  24612032 aataaagagttgtgatatttgtacaaccatatctaacaactttgatgacaacttt 24611978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 33660227 - 33660151
Alignment:
Q  99 gagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    ||||||||||||||||||| ||||||| |||||||||| |||||||| ||  |||| | |||||||||||||| ||||    
T  33660227 gagtagtgatatatgtacatccatttgatgacaactttcatgacaacctt-gttttttatcttcttattggtcaaaaa 33660151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 52078600 - 52078539
Alignment:
Q  102 tagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttctt 163  Q
    |||||||||||||||||| ||||   ||||||||||||| ||||||| |||||| |||||||    
T  52078600 tagtgatatatgtacaactattttgaacaactttgatgataactttcattttctctcttctt 52078539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 4154764 - 4154684
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||| ||||||| ||||||| ||| | | |||||||| |||| ||||||  ||| || |||||||||||||||||||||||    
T  4154764 gagttgtgatatttgtacaaacatatctaacaactttaatgataacttttatttactctcttcttattggtccaaaacaat 4154684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 19920916 - 19920864
Alignment:
Q  127 gacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||| ||||||||||  |||||| |||||||||||||| ||||||||    
T  19920916 gacaactttggtgacaactttgtttttctctcttcttattggtcaaaaacaat 19920864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 34395805 - 34395857
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttg-tgacaactttgatgacaacttt 147  Q
    |||||||||||||||||||| | |||||||  |||||||||||||||||||||    
T  34395805 aaagagtagtgatatatgtatatccatttgaagacaactttgatgacaacttt 34395857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 1724120 - 1724203
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||  |||||| ||||||||||| | | |||||||||||  |||||||  ||| || ||||| |||||||||||||||||    
T  1724120 aaagagttatgatatttgtacaaccatatctaacaactttgatcgcaacttttatttactctcttcctattggtccaaaacaat 1724203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 179
Target Start/End: Complemental strand, 5975714 - 5975639
Alignment:
Q  104 gtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||| ||||||||||| | | |||||||| |||||||||||  ||| || ||||  |||||||||||||||||    
T  5975714 gtgatatttgtacaaccatatctaacaactttaatgacaacttttatttactctctttctattggtccaaaacaat 5975639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 129
Target Start/End: Original strand, 9362917 - 9362948
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgac 129  Q
    ||||||||||||||||||||||||||||||||    
T  9362917 agagtagtgatatatgtacaaccatttgtgac 9362948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 148
Target Start/End: Complemental strand, 44519216 - 44519173
Alignment:
Q  105 tgatatatgtacaaccatttgtgacaactttgatgacaactttc 148  Q
    ||||||||| |||||||||| |||||||||| ||||||||||||    
T  44519216 tgatatatgaacaaccatttttgacaacttttatgacaactttc 44519173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 7078391 - 7078469
Alignment:
Q  102 tagtgatatatgtacaaccatttgt-gacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||| |||||||  |||||||||||||||||| ||  || ||| | |||| ||||||| ||||||||    
T  7078391 tagtgatatatgtacatccatttgaagacaactttgatgacaaccttgtttctctcttttctaattggtcaaaaacaat 7078469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 26547417 - 26547371
Alignment:
Q  99 gagtagtgatatatgtacaaccatttg-tgacaactttgatgacaac 144  Q
    ||||||||||||||||||| |||||||  ||||||||||||||||||    
T  26547417 gagtagtgatatatgtacatccatttgaagacaactttgatgacaac 26547371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 38233449 - 38233375
Alignment:
Q  105 tgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||| ||||||||||| | | |||| ||| |||||||||||  ||| || ||||| |||||||||||||||||    
T  38233449 tgatatttgtacaaccatatctaacaattttaatgacaacttttatttactctcttcctattggtccaaaacaat 38233375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 42843231 - 42843313
Alignment:
Q  98 agagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||| |||||| ||| ||| ||| || |||| ||||||| ||  |||||| |||||||||||||| ||||||||    
T  42843231 agagtagtgatatttgtacatccaattgatgataattttggtgacaaccttgtttttctctcttcttattggtcaaaaacaat 42843313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 5959535 - 5959490
Alignment:
Q  134 ttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||  |||||| |||||||||||||| ||||||||    
T  5959535 ttgatgacaactttgattttctctcttcttattggtcaaaaacaat 5959490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 26501450 - 26501397
Alignment:
Q  126 tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||| |||||||| ||  |||||| |||||||||||||| ||||||||    
T  26501450 tgacaactttaatgacaaccttgtttttctctcttcttattggtcaaaaacaat 26501397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 29489275 - 29489328
Alignment:
Q  126 tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||  ||||||| ||  ||||||||||||||||||||| ||||||||    
T  29489275 tgacaactttagtgacaaccttgtttttctttcttcttattggtcaaaaacaat 29489328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 38019387 - 38019467
Alignment:
Q  94 ataaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    |||||||| |||||||| || |||||||||||  |||| |||||||||||| ||| |||||| | || ||||||||| ||||    
T  38019387 ataaagagcagtgatatttgaacaaccatttggtacaa-tttgatgacaaccttctttttctcttttgttattggtcaaaaa 38019467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 44950309 - 44950390
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||| ||||||| |||||||| || ||| |||| ||| |||||||||||  ||| || ||||| ||||| |||||||||||    
T  44950309 agagttgtgatatttgtacaactatatgtaacaattttaatgacaacttttatttactctcttcctattgatccaaaacaat 44950390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 130
Target Start/End: Original strand, 9335989 - 9336021
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgaca 130  Q
    |||||||||||| ||||||||||||||||||||    
T  9335989 agagtagtgatacatgtacaaccatttgtgaca 9336021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 179
Target Start/End: Complemental strand, 10121939 - 10121863
Alignment:
Q  103 agtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||| ||||||| |||| ||||||| ||  |||| || |||| |||||| ||||||||||| || ||||||||    
T  10121939 agtgatatttgtacaatcattagtgacaatttgcatgataattttctttttctctcttcttattgatcaaaaacaat 10121863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 135
Target Start/End: Original strand, 11011888 - 11011920
Alignment:
Q  103 agtgatatatgtacaaccatttgtgacaacttt 135  Q
    |||||||||||||||||||||||||| ||||||    
T  11011888 agtgatatatgtacaaccatttgtgataacttt 11011920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 12039615 - 12039647
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaa 131  Q
    |||||||||||| ||||||||||||||||||||    
T  12039615 gagtagtgatatttgtacaaccatttgtgacaa 12039647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 18610924 - 18610872
Alignment:
Q  127 gacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||  ||||||||||||||| || |||| ||||||||| ||||||||    
T  18610924 gacaacttttgtgacaactttcctttcctctctttttattggtcaaaaacaat 18610872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 147
Target Start/End: Original strand, 44503547 - 44503591
Alignment:
Q  103 agtgatatatgtacaaccatttgtgacaactttgatgacaacttt 147  Q
    ||||| |||||||||| ||||||  ||||||||||||||||||||    
T  44503547 agtgacatatgtacaatcatttgatacaactttgatgacaacttt 44503591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 179
Target Start/End: Original strand, 52669669 - 52669749
Alignment:
Q  100 agtagtgatatatgtacaaccattt-gtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||| |||||| ||||||||||||| ||||||| |||  || |||| |||| ||||| ||||| |||||||| ||||||||    
T  52669669 agtaatgatatttgtacaaccatttggtgacaaattttgtgtcaaccttccctttctctcttcatattggtcaaaaacaat 52669749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 7e-30; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 7693507 - 7693417
Alignment:
Q  89 ttttaataaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||  |||||| |||||||||||||||||||||||    
T  7693507 ttttattaaagagtagtgatatatgtacaaccatttgggacaactttgatgacaatttttattttctctcttcttattggtccaaaacaat 7693417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 30622207 - 30622126
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||| |||| | |||||||||||||||||||||||    
T  30622207 agagtagtgatatatgtacaactatttgggacaactttgatgacaactttcattttttctcttcttattggtccaaaacaat 30622126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 19788964 - 19789041
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |  |||||| |||||| ||||||||||||    
T  19788964 agagtagtgatatatgtacaaccatttgggacaactttgatgacaactctgattttctctcttctcattggtccaaaa 19789041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 30795982 - 30796064
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||| ||||| |||||||||||||||||  ||||||||||||  ||||||| |||||||||||| ||||||||    
T  30795982 aagagtagtgatatttgtactaccatttgtgacaacttgtatgacaactttctatttcttttttcttattggtcaaaaacaat 30796064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 27176139 - 27176063
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    |||||||||||| |||| ||  |||||||||| |||| |||||||||||| ||| ||||||||||||||||||||||    
T  27176139 gagtagtgatatttgtaaaataatttgtgacatctttaatgacaactttcatttgctttcttcttattggtccaaaa 27176063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 2333560 - 2333477
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||| |||||||||||||| ||||||  |||| ||||||||||| |||  |||||| |||||||||| ||||||||||||    
T  2333560 aaagagtactgatatatgtacaatcatttgaaacaattttgatgacaatttttattttctctcttcttattagtccaaaacaat 2333477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 3800784 - 3800696
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaac------tttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||| |||||||||||||||||||||||| ||||||      |||| ||||||||||| |||||| |||||| ||||||||||||||||    
T  3800784 aagaatagtgatatatgtacaaccatttgggacaacgacaactttgttgacaactttcattttctctcttctcattggtccaaaacaat 3800696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 1804055 - 1803971
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||| |||||| ||| ||| ||||||||||| ||||||| ||  |||||| |||||||||||||| ||||||||    
T  1804055 aaagagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattggtcaaaaacaat 1803971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 9200286 - 9200212
Alignment:
Q  105 tgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||| ||||||||||| | | ||||||||||||||||||||  ||| || ||||| |||||||||||||||||    
T  9200286 tgatatttgtacaaccatatctaacaactttgatgacaacttttatttactctcttcctattggtccaaaacaat 9200212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 14569351 - 14569269
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||| ||||||||||||| || ||||||||||| || |||  || ||| |||| | ||||||||||||||||    
T  14569351 aagagtagtgatatacgtacaaccatttgagataactttgatgataaattttattatctctcttttcattggtccaaaacaat 14569269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 28647323 - 28647400
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    |||||||||||||||||||| |||||||  ||||||||| ||||||||||  |||  | |||||| ||||||||||||    
T  28647323 agagtagtgatatatgtacatccatttggtacaactttgttgacaactttaatttgttctcttctcattggtccaaaa 28647400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 23633211 - 23633294
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||| |||||||||  |||||||||| |||||| |||| ||||||||||  |||||| | || | ||||||||||||||||    
T  23633211 aaagagtggtgatatattgacaaccatttctgacaattttgttgacaacttttattttctcttttttcattggtccaaaacaat 23633294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 6158669 - 6158749
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||| ||||||| ||||||||||| | | |||||||| |||||||||||  ||| || ||||  |||||||||||||||||    
T  6158669 gagttgtgatatgtgtacaaccatatctaacaactttaatgacaacttttatttactctctttctattggtccaaaacaat 6158749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 135
Target Start/End: Complemental strand, 28875279 - 28875239
Alignment:
Q  95 taaagagtagtgatatatgtacaaccatttgtgacaacttt 135  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  28875279 taaagagtaatgatatatgtacaaccatttgggacaacttt 28875239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 179
Target Start/End: Original strand, 26860509 - 26860584
Alignment:
Q  104 gtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||| ||||||||||| | | |||||||| |||||||||||  ||| || ||||  |||||||||||||||||    
T  26860509 gtgatatttgtacaaccatatctaacaactttaatgacaacttttatttactctctttctattggtccaaaacaat 26860584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 33491922 - 33491843
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgt-gacaactttgatgacaactttccttttctttcttcttattggtccaaaac 176  Q
    ||||| |||||||||||||| |||||||  |||||||||||| ||||| ||  || ||| |||||||||||||| |||||    
T  33491922 agagtggtgatatatgtacatccatttgaagacaactttgattacaaccttatttctctctcttcttattggtcaaaaac 33491843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 179
Target Start/End: Complemental strand, 1969814 - 1969728
Alignment:
Q  94 ataaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctt-tcttcttattggtccaaaacaat 179  Q
    |||||||||  | ||||||||||||||||||| || ||||||||| ||| ||||| |||| || | || |||||| |||||||||||    
T  1969814 ataaagagtgataatatatgtacaaccatttgggataactttgattacatctttcatttttttctatttttattgttccaaaacaat 1969728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 3821587 - 3821506
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||||||  ||||||  | |||||||||||||| |||  |||  | |||||| |||| |||||||||||    
T  3821587 agagtagtgatatatgtacattcatttggtataactttgatgacaatttttatttgttctcttctcattgatccaaaacaat 3821506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 12441710 - 12441629
Alignment:
Q  99 gagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||| |||||| | | ||| ||||||||||| ||||||| || ||||||| ||||||||| |||  ||||||||    
T  12441710 gagtagtgatatttgtacatctaattgatgacaactttggtgacaaccttgcttttctctcttcttatcggttaaaaacaat 12441629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 17835766 - 17835714
Alignment:
Q  127 gacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||| |||||||||||  |||||| |||||||||||||  ||||||||    
T  17835766 gacaactttaatgacaactttgtttttctctcttcttattggttaaaaacaat 17835714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 17500880 - 17500799
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||||||||||||||||||||    
T  17500880 agagtagtgatatatgtacaaccatttgggacaactttgatgataactttcattttctctcttcttattggtccaaaacaat 17500799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 17552334 - 17552415
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||||||||||||||||||||    
T  17552334 agagtagtgatatatgtacaaccatttgggacaactttgatgataactttcattttctctcttcttattggtccaaaacaat 17552415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 49089053 - 49089129
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||| |||||| ||||||||||||    
T  49089053 gagtagtgatatatgtacaacaatttctgacaactttgatgacaactttcattttctctcttctcattggtccaaaa 49089129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 27070557 - 27070638
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||| ||| |||||| ||||||||||||||||||| || |||||| |||||| ||||||||||||||||    
T  27070557 agagtagtgatatatgtgcaatcatttgggacaactttgatgacaactctcattttctctcttctcattggtccaaaacaat 27070638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 27207756 - 27207675
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||| ||| |||||| ||||||||||||||||||| || |||||| |||||| ||||||||||||||||    
T  27207756 agagtagtgatatatgtgcaatcatttgggacaactttgatgacaactctcattttctctcttctcattggtccaaaacaat 27207675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 30391328 - 30391248
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||||||| ||||||  ||||||||||||||||||||  ||| || |||||| ||||||||||||||||    
T  30391328 gagtagtgatatatgtacaatcatttggtacaactttgatgacaacttttatttactctcttctcattggtccaaaacaat 30391248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 175
Target Start/End: Complemental strand, 31436602 - 31436523
Alignment:
Q  95 taaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    |||||||||||||||||||||||||||||||  |||| |||||||||||||||| |||| | |||||| ||||||| ||||    
T  31436602 taaagagtagtgatatatgtacaaccatttgatacaa-tttgatgacaactttcattttatctcttctcattggtctaaaa 31436523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 47644891 - 47644811
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||||||  |||||  | ||||||||||||||||||| ||| || |||||| ||||||||||||||||    
T  47644891 gagtagtgatatatgtacaattatttggtataactttgatgacaactttcatttgctctcttctcattggtccaaaacaat 47644811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 179
Target Start/End: Complemental strand, 5724219 - 5724140
Alignment:
Q  100 agtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||||||||||||  ||||| || ||||||||||||  |||||| |||| | ||||||||||||||||    
T  5724219 agtagtgatatatgtacaaccatttaagacaaattggatgacaacttttattttctctcttttcattggtccaaaacaat 5724140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 12142079 - 12141986
Alignment:
Q  86 ctattttaataaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||| | || |||||||||||| || |||||||||||  ||||||||  ||||||||||  ||||||||||| | ||||||| ||||||||    
T  12142079 ctatttttacaatgagtagtgatatttgaacaaccatttgatacaacttttgtgacaactttttttttctttcttttcattggtcaaaaacaat 12141986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 37149351 - 37149444
Alignment:
Q  87 tattttaataaagagtagtgatatatgtacaaccatttgt-gacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||| | |||||||||||||||||||||| | ||||   ||||||||| |||||||| ||  ||||||||||||||||||||  ||||||||    
T  37149351 tatttttacaaagagtagtgatatatgtacatctatttcaagacaacttttatgacaaccttgtttttctttcttcttattggtaaaaaacaat 37149444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 180
Target Start/End: Original strand, 37385116 - 37385203
Alignment:
Q  94 ataaagagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaatt 180  Q
    ||||||||||||||||| |||||| ||| ||| ||||||||||| ||||||| ||  | |||| | |||||||||||| |||||||||    
T  37385116 ataaagagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgttcttctcttttcttattggtcaaaaacaatt 37385203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 40077432 - 40077357
Alignment:
Q  105 tgatatatgtacaaccatttgtga-caactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||| || |||||||||||| | ||||||| |||||||| | | ||||||||||||||||||||| ||||||||    
T  40077432 tgatatttgaacaaccatttgttaacaacttttatgacaacctcctttttctttcttcttattggtcaaaaacaat 40077357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 10014842 - 10014924
Alignment:
Q  98 agagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||| |||||| ||| ||| ||||||||||| |||||| |||  |||||| |||| ||||||||| ||||||||    
T  10014842 agagtagtgatatttgtacatccaattgatgacaactttggtgacaattttgtttttctctctttttattggtcaaaaacaat 10014924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 36186781 - 36186831
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaacttt 147  Q
    ||||||| |||||||||||||||||||||  | ||||||||||||||||||    
T  36186781 aagagtaatgatatatgtacaaccatttggtataactttgatgacaacttt 36186831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 21153235 - 21153158
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    ||||||||||||||||||||||  ||||  |||||||| |||||||||||  |||||| |||| | ||||||| ||||    
T  21153235 agagtagtgatatatgtacaactttttggtacaactttcatgacaactttgattttctctcttttgattggtcaaaaa 21153158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 167
Target Start/End: Complemental strand, 8742569 - 8742497
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattg 167  Q
    ||||||||||||||| |||||| ||| ||| ||||||||||| ||||||| ||  |||||| |||||||||||    
T  8742569 aaagagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattg 8742497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 31009529 - 31009609
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||| ||||||| ||||||||||| | | ||||||||  ||||||||||  ||| || ||||| |||||||||||||||||    
T  31009529 gagttgtgatatttgtacaaccatatctaacaactttagtgacaacttttatttactctcttcctattggtccaaaacaat 31009609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 24267533 - 24267616
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||  |||||| ||||||||||| | | ||||||||||||||||||||  ||| || | ||  |||||||||||||||||    
T  24267533 aaagagttatgatatttgtacaaccatatctaacaactttgatgacaacttttatttactctttttctattggtccaaaacaat 24267616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 26041487 - 26041412
Alignment:
Q  105 tgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||| |||||| ||||||  ||||||||||  ||||||||||  |||||| |||||||||||||| ||||||||    
T  26041487 tgatatttgtacatccattttatgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaat 26041412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 45981304 - 45981354
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaacttt 147  Q
    ||||||| ||||||||||||||| |||  ||| ||||||||||||||||||    
T  45981304 aagagtaatgatatatgtacaactattaatgataactttgatgacaacttt 45981354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 179
Target Start/End: Original strand, 10161850 - 10161899
Alignment:
Q  130 aactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||| ||||||||||  ||||||||||| ||||||||| ||||||||    
T  10161850 aactttgttgacaactttgtttttctttctttttattggtcaaaaacaat 10161899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 178
Target Start/End: Complemental strand, 23761251 - 23761170
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaa 178  Q
    |||||| ||||||| |||| |||||| | | ||||||||||| ||||||||  ||| || ||||| |||| |||||||||||    
T  23761251 aagagttgtgatatttgtataaccatatctaacaactttgataacaacttttatttactctcttcctattagtccaaaacaa 23761170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 18067814 - 18067890
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    |||| ||||||| |||||||| || | | ||||||||||||||||||||  ||| || ||||| ||||||| |||||    
T  18067814 gagttgtgatatttgtacaactatatctaacaactttgatgacaacttttatttactctcttcctattggttcaaaa 18067890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 44175699 - 44175647
Alignment:
Q  127 gacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||  ||||||  ||| ||||||||||||||||||||| ||||||||    
T  44175699 gacaactttagtgacaatcttctttttctttcttcttattggtcaaaaacaat 44175647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 1459128 - 1459216
Alignment:
Q  11 gtgagatgaacataaatatagatataaaaggtgtt-gagttggtggtgaagacaactattgtgtacacatctgttcctattttaataaa 98  Q
    |||| |||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1459128 gtgatatgaacgtaactatagatataaaaggtgtttgagttggtggtgaagacaactattgtgtacacatatgttcctattttaataaa 1459216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 622347 - 622428
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||  |||||||||||||||||||||| ||||||||||  |||||| |||||| ||||||||||||||||    
T  622347 agagtagtgatatattgacaaccatttgtgacaactttgttgacaacttttattttctctcttctcattggtccaaaacaat 622428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 2812464 - 2812383
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||| ||||||||| ||| ||||| ||||||||| |||| || |||| ||||||||||||||||||||||||||||||    
T  2812464 agagtagtaatatatgtataactatttgagacaactttaatgataattttcattttctttcttcttattggtccaaaacaat 2812383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 179
Target Start/End: Original strand, 11233916 - 11234000
Alignment:
Q  95 taaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||| |||||||||||||||||||||  ||||||||||||||||||||  ||| || |||||| |||| |||||||||||    
T  11233916 taaagagtactgatatatgtacaaccatttggtacaactttgatgacaacttttatttactctcttctcattgatccaaaacaat 11234000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 44334690 - 44334770
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||  |||||||||||||||||||||| |||||| |||  |||||| |||||| ||||||||||||||||    
T  44334690 gagtagtgatatattgacaaccatttgtgacaactttgttgacaatttttattttctctcttctcattggtccaaaacaat 44334770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 4208115 - 4208197
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||||||||||||| |||||||| |||  ||||||||||| ||||||||||||| ||| || |||| ||||    
T  4208115 aagagtagtgatatatgtacaaccatctgtgacaattttattgacaactttcattttctttcttctcattagtgcaaatcaat 4208197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 18713786 - 18713709
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    ||||||||||||||||||||||||||||  |||| ||| |||||||||||| || ||| |||||| ||||||||||||    
T  18713786 agagtagtgatatatgtacaaccatttggaacaattttaatgacaactttcattctctctcttctcattggtccaaaa 18713709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 37323841 - 37323768
Alignment:
Q  107 atatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaatt 180  Q
    ||||||||||||| ||||| ||||||||||||||||| |||| ||||||  ||||||||||||||||| |||||    
T  37323841 atatatgtacaactatttgggacaactttgatgacaattttcattttctcccttcttattggtccaaaccaatt 37323768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 42424416 - 42424336
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaac 176  Q
    |||||||||||||||||||||| |||||||  ||||||||||||||||||||| |||  | |||||| |||| ||||||||    
T  42424416 aaagagtagtgatatatgtacatccatttggtacaactttgatgacaactttcatttattctcttctcattgctccaaaac 42424336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 179
Target Start/End: Original strand, 47509032 - 47509116
Alignment:
Q  95 taaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||||| |||  |||  | | |||||||||||||||||||||    
T  47509032 taaaaagtagtgatatatgtacaaccatttgatacaactttgatgacaatttttatttgttcttttcttattggtccaaaacaat 47509116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 175
Target Start/End: Complemental strand, 22154049 - 22153970
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    ||||||||||||||| ||||||||||||||  |||||||| |||||||||||| ||| || |||| | ||||||||||||    
T  22154049 aaagagtagtgatatttgtacaaccatttggtacaactttaatgacaactttcatttgctctcttttcattggtccaaaa 22153970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 179
Target Start/End: Complemental strand, 26669021 - 26668942
Alignment:
Q  100 agtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||||||||||||  ||||||| |||||||||||||| ||||||   || | ||||||||||||||||    
T  26669021 agtagtgatatatgtacaaccatttaggacaactatgatgacaactttcattttctcatttttcattggtccaaaacaat 26668942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 23906874 - 23906956
Alignment:
Q  98 agagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||| |||||| ||| ||| ||||||||||| ||||||| || ||||||| |||||||||||||| ||||||||    
T  23906874 agagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgcttttctctcttcttattggtcaaaaacaat 23906956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 35425559 - 35425641
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||||| || ||||||  ||| ||||||||||||||||| ||| || |||||| |||| |||||||||||    
T  35425559 aagagtagtgatatatgtataatcatttggtacatctttgatgacaactttcatttgctctcttctcattgatccaaaacaat 35425641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 179
Target Start/End: Original strand, 12094280 - 12094359
Alignment:
Q  100 agtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||| ||||||||| | | |||||||||||||||||  |||| ||| || |||||||||||||| ||||||||    
T  12094280 agtagtgatatttgtacaaccgtctatgacaactttgatgacacatttcatttgctctcttcttattggtctaaaacaat 12094359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 23920481 - 23920399
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||| ||||||| ||||||||||| ||| |||||||| ||||||| |||  ||| || ||||| |||||||||||||||||    
T  23920481 aagagttgtgatatttgtacaaccatatgtaacaactttaatgacaatttttatttactctcttcctattggtccaaaacaat 23920399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 3484928 - 3484891
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaacttt 135  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3484928 agagtagtgatatatgtacaaccatttgtgacaacttt 3484891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 12044642 - 12044723
Alignment:
Q  99 gagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||| |||||| ||| ||| ||||||||||||||||||| || ||||| | ||||||||||| || ||||||||    
T  12044642 gagtagtgatatttgtacatccaattgatgacaactttgatgacaaccttacttttttctcttcttattgatcaaaaacaat 12044723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 53932279 - 53932360
Alignment:
Q  99 gagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||| |||||| ||| ||| ||||||||||| ||||||| || ||||||| |||||||||| ||| ||||||||    
T  53932279 gagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgcttttctatcttcttattagtcaaaaacaat 53932360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 54233389 - 54233470
Alignment:
Q  99 gagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||| |||||| ||| ||| ||||||||||| ||||||| ||  |||||| |||||||||||||| ||||||||    
T  54233389 gagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattggtcaaaaacaat 54233470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 1031345 - 1031396
Alignment:
Q  128 acaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||| |||||||||||  ||||||||||||||||||||| ||||||||    
T  1031345 acaacttttatgacaactttatttttctttcttcttattggtcaaaaacaat 1031396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 46574325 - 46574287
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaacttt 135  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  46574325 aagagtagtgatatttgtacaaccatttgtgacaacttt 46574287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 145
Target Start/End: Original strand, 53133841 - 53133883
Alignment:
Q  103 agtgatatatgtacaaccatttgtgacaactttgatgacaact 145  Q
    |||||||| ||||||||||| ||||||||||||||||||||||    
T  53133841 agtgatatttgtacaaccatgtgtgacaactttgatgacaact 53133883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 28263700 - 28263647
Alignment:
Q  126 tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||  ||||||||||  ||||||||||||||||||||| ||||||||    
T  28263700 tgacaactttagtgacaactttatttttctttcttcttattggtcaaaaacaat 28263647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 40159714 - 40159791
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    ||||||||||||||||||||||  ||||  |||||||| |||||||||||  |||||| |||| | ||||||| ||||    
T  40159714 agagtagtgatatatgtacaactctttggtacaactttcatgacaactttggttttctctcttttgattggtcaaaaa 40159791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 43176377 - 43176304
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtcca 172  Q
    |||||||||||||| ||||||||||||  ||||||||||||| ||||||  ||| || |||| |||||| ||||    
T  43176377 gagtagtgatatatatacaaccatttgatacaactttgatgataacttttatttgctctctttttattgatcca 43176304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 50652543 - 50652490
Alignment:
Q  126 tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||| ||||||||||| ||| ||||||| |||||||||||||| ||||||||    
T  50652543 tgacaattttgatgacaattttgcttttctctcttcttattggtcaaaaacaat 50652490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 2009828 - 2009760
Alignment:
Q  107 atatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    |||| |||||| | |||| ||||||||||| ||||||| || ||||||| |||||||||||||| ||||    
T  2009828 atatttgtacatcaatttatgacaactttggtgacaaccttgcttttctctcttcttattggtcaaaaa 2009760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 39932325 - 39932245
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||   |||| ||||| ||||||||||| ||||||||||  |||||| | |||| |||||| |||||||||    
T  39932325 gagtagtgatatactgacaatcatttttgacaactttgttgacaacttttattttctcttttctcattggttcaaaacaat 39932245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 175
Target Start/End: Complemental strand, 43441856 - 43441776
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    ||||||||||||||| |||||| ||| ||| |||||||||||| |||||| || ||||||| | || ||||||||| ||||    
T  43441856 aaagagtagtgatatttgtacatccaattgatgacaactttgacgacaaccttacttttctctttttttattggtcaaaaa 43441776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 43460574 - 43460490
Alignment:
Q  96 aaagagtagtgatatatgtacaaccattt-gtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||| ||||||||| ||||||||| ||| |||||||||||   |||| | ||| |||||| |||||||||||||| ||||||||    
T  43460574 aaagaatagtgatatttgtacaacctttttgtgacaacttttgggacagccttcattttctctcttcttattggtcaaaaacaat 43460490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 177
Target Start/End: Complemental strand, 47683974 - 47683894
Alignment:
Q  98 agagtagtgatatatgtacaaccattt-gtgacaactttgatgacaactttccttttctttcttcttattggtccaaaaca 177  Q
    |||||| |||||| ||||||||||||| |||||||||||   |||||| |||  ||||| |||||||||||||| ||||||    
T  47683974 agagtaatgatatttgtacaaccattttgtgacaacttttgagacaaccttctctttctctcttcttattggtcaaaaaca 47683894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 135
Target Start/End: Complemental strand, 24748772 - 24748733
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttgtgacaacttt 135  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  24748772 aaagagtagtgatatatgtacaactatttgagacaacttt 24748733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 27937149 - 27937066
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||| |||||| |||||| | | ||| ||||||||||||||||||| || ||||| | |||| ||||||||| ||||||||    
T  27937149 aagagtaatgatatttgtacatctaattgatgacaactttgatgacaaccttgcttttttatctttttattggtcaaaaacaat 27937066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 146
Target Start/End: Complemental strand, 31997988 - 31997937
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttgtgacaac-tttgatgacaactt 146  Q
    ||||||||||||||| || ||||||||||| |||||| ||||||||||||||    
T  31997988 aaagagtagtgatatttgaacaaccatttgagacaacttttgatgacaactt 31997937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 135
Target Start/End: Original strand, 38692224 - 38692263
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttgtgacaacttt 135  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  38692224 aaagagtagtgatatttgtacaaccatttatgacaacttt 38692263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 175
Target Start/End: Original strand, 51032512 - 51032591
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    ||||||||||||||||||||||||  |||   |||||||| |||||||||||  |||||| |||| | ||||||| ||||    
T  51032512 aaagagtagtgatatatgtacaacttttttatacaactttcatgacaactttaattttctatcttttgattggtcaaaaa 51032591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 51717632 - 51717553
Alignment:
Q  91 ttaataaagagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggt 169  Q
    |||| ||| ||||||||||| |||||| ||| ||| ||||||||||| ||||||| || ||||||| ||||||| |||||    
T  51717632 ttaaaaaaaagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgcttttctctcttcttgttggt 51717553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 180
Target Start/End: Complemental strand, 3484900 - 3484858
Alignment:
Q  138 tgacaactttccttttctttcttcttattggtccaaaacaatt 180  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  3484900 tgacaactttcattttctctcttctcattggtccaaaacaatt 3484858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 179
Target Start/End: Original strand, 12762854 - 12762912
Alignment:
Q  121 atttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||| ||| |||||||||||| |||||| |||| ||||||||  ||||||||    
T  12762854 atttgtgacaatttttatgacaactttctttttctctctttttattggtaaaaaacaat 12762912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 38692253 - 38692295
Alignment:
Q  137 atgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||| |||||| |||||||||||||| ||||||||    
T  38692253 atgacaactttctttttctatcttcttattggtcaaaaacaat 38692295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 42104600 - 42104550
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaacttt 147  Q
    |||||| ||||||| ||||||||||| ||| |||||||| |||||||||||    
T  42104600 aagagttgtgatatttgtacaaccatatgtaacaactttaatgacaacttt 42104550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 46473312 - 46473230
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||| |||||| || |||||||||||  |||||||| ||||||||||   |||||| |||| | ||||||| ||||||||    
T  46473312 aagagtaatgatatttgaacaaccatttgatacaacttttatgacaacttcttttttctctcttttcattggtcaaaaacaat 46473230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 179
Target Start/End: Original strand, 31169464 - 31169529
Alignment:
Q  114 tacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||| || |||||||| |||||||||||||||| |||||| | |||| ||||  ||||||||||    
T  31169464 tacaactatatgtgacaattttgatgacaactttcattttctctattctcattgacccaaaacaat 31169529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 34021379 - 34021432
Alignment:
Q  126 tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||  ||||||||||  |||||| |||||||||||||| ||||||||    
T  34021379 tgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaat 34021432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 35756135 - 35756082
Alignment:
Q  126 tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||| ||||||||||  |||||| |||||||||||||  ||||||||    
T  35756135 tgacaactttggtgacaactttgtttttctctcttcttattggttaaaaacaat 35756082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 179
Target Start/End: Complemental strand, 44972876 - 44972835
Alignment:
Q  138 tgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||| |||||| | |||||||||||||||||||||    
T  44972876 tgacaactttcattttctcttttcttattggtccaaaacaat 44972835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 11574707 - 11574655
Alignment:
Q  128 acaactttgatgacaactttccttttctttcttcttattggtccaaaacaatt 180  Q
    ||||||||| ||||||| ||  |||||| |||||||||||||| |||||||||    
T  11574707 acaactttggtgacaaccttaattttctctcttcttattggtcaaaaacaatt 11574655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 37585612 - 37585533
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||| |||||| || ||||| |||| ||| ||||||  ||||||| | |||||||| |||||||||||||| ||||||||    
T  37585612 gagtaatgatatttgaacaac-atttttgataacttttgtgacaacctaccttttctctcttcttattggtcaaaaacaat 37585533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 44910890 - 44910806
Alignment:
Q  96 aaagagtagtgatatatgtacaaccattt-gtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||| |||||| || |||| | ||| ||||||| |||  ||||||||| | |||||| |||||||||||||| ||||||||    
T  44910890 aaagagtaatgatatttgaacaatcttttagtgacaatttttgtgacaacttacattttctctcttcttattggtcaaaaacaat 44910806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 55196405 - 55196486
Alignment:
Q  98 agagtagtgatatatgtacaac----catttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    ||||| ||||||||||||||||    ||| || || ||||||||||| ||||||| |||||| |||| ||||| ||||||||    
T  55196405 agagttgtgatatatgtacaactgtccatatgggataactttgatgataactttcattttctctctttttattagtccaaaa 55196486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 156090 - 156008
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||| |||||| ||||||||||||||||    
T  156090 aagagtagtgatatatgtacaaccatttgggacaactttgatgacaactctcattttctctcttctcattggtccaaaacaat 156008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 3722965 - 3723045
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||| |||| ||||||||||||||||||    
T  3722965 gagtaatgatatatgtacaaccatttgggacaactttgatgacaactttcattttctctctttttattggtccaaaacaat 3723045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 18638728 - 18638806
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||| | |||||||||||||||||    
T  18638728 aagagtagtgatatatgtacaaccatttgggacaactttgatgacaacttttattttctcttttcttattggtccaaaa 18638806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 87 - 179
Target Start/End: Complemental strand, 30301404 - 30301312
Alignment:
Q  87 tattttaataaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||| || |||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||| || |||||| ||| ||||||||||||    
T  30301404 tattttgattaagagtagtgatatatgtacaaccatatgtaacaactttgatgacaactttcatttcctctcttctcatttgtccaaaacaat 30301312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 34952293 - 34952374
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||||||||  ||||| || ||||||||||||||||||  |||||| |||||||||||||||||||||||    
T  34952293 agagtagtgatatatgtacaattatttgggataactttgatgacaacttttattttctctcttcttattggtccaaaacaat 34952374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 100 - 179
Target Start/End: Original strand, 39840593 - 39840672
Alignment:
Q  100 agtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||  |||||  |||||| ||||||||||||||||    
T  39840593 agtagtgatatatgtacaactatttgtgataactttgatgacaacttttattttccctcttctcattggtccaaaacaat 39840672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 27341052 - 27340971
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||||||| ||||||  |||| |||||||||||||||| ||| || |||| ||||||||||||||||||    
T  27341052 agagtagtgatatatgtacaatcatttggtacaattttgatgacaactttcatttgctctctttttattggtccaaaacaat 27340971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 42825297 - 42825216
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||  ||||||||||||||||| |||| ||||||||||  |||||| |||||| ||||||||||||||||    
T  42825297 agagtagtgatatattgacaaccatttgtgacaattttgttgacaacttttattttctctcttctcattggtccaaaacaat 42825216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 178
Target Start/End: Complemental strand, 20125573 - 20125493
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaa 178  Q
    ||||| ||||||||| |||||| ||||| |||||||||||||||||||||| |||||| |||||| ||||||| |||||||    
T  20125573 agagtggtgatatatatacaactatttgggacaactttgatgacaactttcattttctctcttctcattggtcaaaaacaa 20125493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 8725307 - 8725379
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaa 173  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||||| |||||| | |||||||||||||||    
T  8725307 gagtagtgatatat--acaaccatttgggacaactttgatgacaactttcattttctcttttcttattggtccaa 8725379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 33743219 - 33743302
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||||||||| ||||||  ||||||||||||||||||||  ||| || |||||| |||| |||||||||||    
T  33743219 aaagagtagtgatatatgtacaatcatttggtacaactttgatgacaacttttatttgctctcttctcattgatccaaaacaat 33743302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 3155184 - 3155108
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    |||||||||||| ||||||| ||| | |||||||||| |||||||||||| |||||| | |||||||||||||||||    
T  3155184 gagtagtgatatttgtacaatcatatatgacaactttaatgacaactttcattttctctattcttattggtccaaaa 3155108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 16292137 - 16292219
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||| |  ||||||  ||| ||||||||| ||||||||    
T  16292137 aagagtagtgatatatgtacaaccattgatgacaactttgaagacaactattattttctcgctttttattggtcaaaaacaat 16292219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 21062958 - 21062884
Alignment:
Q  105 tgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||||||||  |||| |||||||||||||||| ||| || | |||||||||| ||||||||||    
T  21062958 tgatatatgtacaaccatttggtacaattttgatgacaactttcatttgctcttttcttattggcccaaaacaat 21062884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 31024893 - 31024974
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||||||| | ||| |||| |||||||| |||||||||| |||| | |||||| |||||| |||||||||    
T  31024893 agagtagtgatatatgtacatcaattggtgataactttgacgacaactttcattttttctcttctcattggttcaaaacaat 31024974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 153
Target Start/End: Original strand, 19867499 - 19867550
Alignment:
Q  102 tagtgatatatgtacaaccatttgtgacaactttgatgacaactttcctttt 153  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||| ||||    
T  19867499 tagtgatatatgtacatccattggtgacaactttgatgacaactttcatttt 19867550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 14914554 - 14914472
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||| |||||| ||||||   | ||||||||||||||||||  |||| | |||||||||||||| ||||||||    
T  14914554 aagagtagtgatatttgtacatccatttcatataactttgatgacaactttgtttttatctcttcttattggtcaaaaacaat 14914472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 179
Target Start/End: Complemental strand, 2456204 - 2456128
Alignment:
Q  103 agtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||| ||| ||||||||||| |||||||| ||||||||||||| ||  || |||||||  |||||||||||||||||    
T  2456204 agtgctatttgtacaaccatgtgtgacaattttgatgacaactatcagttgctttctttctattggtccaaaacaat 2456128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 17489534 - 17489450
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||| |||||| ||| ||| ||||||||||| ||||||  ||  |||||| |||||||||||||| ||||||||    
T  17489534 aaagagtagtgatatttgtacatccaattgatgacaactttggtgacaatcttgtttttctctcttcttattggtcaaaaacaat 17489450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 33626521 - 33626607
Alignment:
Q  93 aataaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||| ||||||| ||||||||||| | | |||||||| |||||||||||  ||| || ||||| |||| ||| ||||||||    
T  33626521 aataaagagttgtgatatttgtacaaccatatctaacaactttaatgacaacttttatttactctcttcctattagtctaaaacaat 33626607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 4878162 - 4878243
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||| ||||||| ||||||||||| | | ||||||||||||||||||||  ||| || | ||  |||||||||||||||||    
T  4878162 agagttgtgatatttgtacaaccatatctaacaactttgatgacaacttttatttactctatttctattggtccaaaacaat 4878243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 8959346 - 8959262
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||| |||||| ||| ||| |||||||||||  |||||| ||  |||||| |||| ||||||||| ||||||||    
T  8959346 aaagagtagtgatatttgtacatccaattgatgacaactttggcgacaaccttgtttttctctctttttattggtcaaaaacaat 8959262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 179
Target Start/End: Original strand, 33567124 - 33567208
Alignment:
Q  95 taaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||||| |||||||||||  ||||||||  |||||| ||   |||||| |||| | ||||||| ||||||||    
T  33567124 taaagagtagtgatatatgaacaaccatttgatacaacttttgtgacaatttcttttttctctcttttcattggtcaaaaacaat 33567208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 36415951 - 36416027
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    |||||||||||||||||||||  ||||  |||||||| |||||||||||  |||||| |||| | ||||||| ||||    
T  36415951 gagtagtgatatatgtacaactctttggtacaactttcatgacaactttggttttctctcttttgattggtcaaaaa 36416027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 26626705 - 26626788
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||| | |||||| || |||||||||||| |||||||| |||||||| ||  |||||| | || ||||||||| ||||||||    
T  26626705 aaagagcaatgatatttgaacaaccatttgttacaactttcatgacaaccttttttttctcttttgttattggtcaaaaacaat 26626788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 175
Target Start/End: Complemental strand, 32425133 - 32425058
Alignment:
Q  100 agtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    |||||||| ||||||||||| |||||  |||||||| |||||||||||  |||||| |||| | ||||||| ||||    
T  32425133 agtagtgacatatgtacaactatttggtacaactttcatgacaactttaattttctatcttttgattggtcaaaaa 32425058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 39788606 - 39788685
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    |||||||||||||| |||||||||| ||| ||| ||||||| ||||||  || ||||||| |||||||||| ||| ||||    
T  39788606 aagagtagtgatatttgtacaaccaattgatgataactttggtgacaatcttgcttttctctcttcttattcgtcaaaaa 39788685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 42807456 - 42807409
Alignment:
Q  133 tttgatgacaactttccttttctttcttcttattggtccaaaacaatt 180  Q
    |||||||||||||||  |||||| |||| |||||||||||||||||||    
T  42807456 tttgatgacaacttttattttctctctttttattggtccaaaacaatt 42807409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 31708511 - 31708465
Alignment:
Q  102 tagtgatatatgtacaaccatttgtgacaactttgatgacaactttc 148  Q
    ||||||||| ||||||||||||||| ||| ||||||| |||||||||    
T  31708511 tagtgatatttgtacaaccatttgtaacatctttgattacaactttc 31708465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 32682044 - 32682082
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaacttt 135  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  32682044 aagagtagtgatatatgtataactatttgtgacaacttt 32682082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 178
Target Start/End: Complemental strand, 22203891 - 22203810
Alignment:
Q  98 agagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaa 178  Q
    |||||| | |||| |||||||||||||| ||  || |||  ||||||| |||||||||| |||||||||||||| |||||||    
T  22203891 agagtaataatatttgtacaaccatttgatggtaatttttgtgacaaccttccttttctctcttcttattggtcaaaaacaa 22203810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 41210418 - 41210483
Alignment:
Q  115 acaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||| | |||||||| |||||||| | | |||||| |||||||||||||| ||||||||    
T  41210418 acaaccatttgctaacaacttttatgacaacctcctttttctctcttcttattggtcaaaaacaat 41210483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 11012308 - 11012227
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||| | ||||||||||||| |||||||    
T  11012308 agagtagtgatatatgtacaatcatatgtgacaactttgatgacaactttcattttctcttttcttattggtccgaaacaat 11012227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 179
Target Start/End: Complemental strand, 42516822 - 42516736
Alignment:
Q  93 aataaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||| |||| | |||||| |||||||||| |||||    
T  42516822 aataatgagcagtgatatatgtacaaccatttgtgacaattttgatgacaactttcattttttctcttctcattggtccaagacaat 42516736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 34114006 - 34114086
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||||||| ||||||  ||||||||||||  ||||||| |||||| |||||||||||||||||||||||    
T  34114006 gagtagtgatatatgtacaatcatttggaacaactttgatggtaactttcattttctctcttcttattggtccaaaacaat 34114086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 4514153 - 4514234
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||| |||||||||||||||| |||  |||||||||||||||||| |||| |||||| |||||| ||||||||||||||||    
T  4514153 agagtggtgatatatgtacaactattcatgacaactttgatgacaattttcattttctctcttctcattggtccaaaacaat 4514234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 10096634 - 10096711
Alignment:
Q  102 tagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||| |||||||  ||||||||||||||||||||| ||| || |||||| ||||||||||||||||    
T  10096634 tagtgatatatgtacagccatttggtacaactttgatgacaactttcatttgctctcttctcattggtccaaaacaat 10096711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 42882640 - 42882556
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttc-ttcttattggtccaaaacaat 179  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||| | || |||| ||| ||||||||||||    
T  42882640 aaagagtagtgatatatgtacaaccatgtgtgacaactttgatgacaattttcattttttctctttctcattagtccaaaacaat 42882556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 11063976 - 11064058
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||| || ||||||||||  |||||||||| ||||||||||| ||||||||||| |||| |||| ||||||||    
T  11063976 aagagtagtgatatttgaacaaccatttaagacaactttggtgacaactttcattttctttctttttatcggtcaaaaacaat 11064058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 45274445 - 45274369
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    |||| |||||||||||||||| ||||| ||||||||||||||||||| || |||||| |||| | ||||||||||||    
T  45274445 gagtggtgatatatgtacaactatttgggacaactttgatgacaactctcattttctctcttttcattggtccaaaa 45274369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 8906352 - 8906419
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttat 165  Q
    |||||| |||||||||||||||||| |||||||| ||||||||||| |||| |||||| |||||||||    
T  8906352 agagtaatgatatatgtacaaccatatgtgacaattttgatgacaattttcattttctctcttcttat 8906419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 18568701 - 18568784
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||| |||||| ||| ||| ||||||||||| ||||||| || ||||||| |||||||||||||| ||||||||    
T  18568701 aagagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgcttttctatcttcttattggtcaaaaacaat 18568784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 40335956 - 40335879
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||||||   |||| |||||||||||||||||||||| |||||| ||| || ||||||| ||||||||    
T  40335956 gagtagtgatatatgtacaa---tttgagacaactttgatgacaactttcattttctctctcctcattggtctaaaacaat 40335879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 31804218 - 31804291
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtga-caactttgatgacaactttccttttctttcttcttattggtc 170  Q
    ||||||||| ||| | ||||| ||||||||| |||||||||||||||||||| |||||||||||| ||||||||    
T  31804218 agagtagtgttatttatacaatcatttgtgaacaactttgatgacaactttcattttctttcttcctattggtc 31804291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 1688315 - 1688397
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||  ||||||||||||||||| |||  | ||||||||  |||||| |||||| ||||||||||| ||||    
T  1688315 aagagtagtgatatattgacaaccatttgtgacaattttattcacaacttttattttctctcttctcattggtccaaaccaat 1688397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 20056565 - 20056483
Alignment:
Q  99 gagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaatt 180  Q
    |||||||||||| |||||| ||| ||| ||||||||||| ||||||  || ||||||| |||||||||||||| |||||||||    
T  20056565 gagtagtgatatttgtacatccaattgatgacaactttggtgacaatcttgcttttctctcttcttattggtcaaaaacaatt 20056483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 41154211 - 41154161
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttc 148  Q
    ||||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  41154211 agagtagtgatatatgtacaaccatttgatacaactttgatgacaattttc 41154161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 2193697 - 2193778
Alignment:
Q  99 gagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||| |||||| ||| ||| ||||||||||||||||||  ||  |||||| |||||||||||||| ||||||||    
T  2193697 gagtagtgatatttgtacatccaattgatgacaactttgatgacaatcttgtttttctctcttcttattggtcaaaaacaat 2193778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 179
Target Start/End: Original strand, 13267362 - 13267447
Alignment:
Q  94 ataaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||| |||| | | ||||   ||||||||||||| ||||||  |||||| |||||||||||||| ||||||||    
T  13267362 ataaagagtagtgatatttgtaaatcgatttcatacaactttgatgaaaactttgtttttctctcttcttattggtcaaaaacaat 13267447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 179
Target Start/End: Complemental strand, 17363409 - 17363332
Alignment:
Q  102 tagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||| |||| ||||||||   ||||||||||||||||||||| ||| || |||| | ||||||||||||||||    
T  17363409 tagtgatatttgtaaaaccattttatacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 17363332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 35332887 - 35332806
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||||| |||||| |||||||||||||||| |||| |  |||||| |||| | | ||||| ||||||||    
T  35332887 agagtagtgatatatgtaccaccattggtgacaactttgatgataactattattttctctcttttcactggtcaaaaacaat 35332806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 40308605 - 40308535
Alignment:
Q  107 atatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||| |  ||||||||| |||||||||||||||| | |||| |||| ||||||||||||||||||    
T  40308605 atatatgtacaatc--ttgtgacaattttgatgacaactttcatgttctctctttttattggtccaaaacaat 40308535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 4511995 - 4511948
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaact 145  Q
    |||||||| ||||||||||||||||| |||||||||| ||||||||||    
T  4511995 agagtagtaatatatgtacaaccattggtgacaacttagatgacaact 4511948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 22071683 - 22071600
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||| ||||||||  |||||||||||||  |||||||   ||||||||||| |||||| |||||||||||||  ||||||||    
T  22071683 aaagaggagtgatattagtacaaccatttggtacaacttgtttgacaactttctttttctctcttcttattggttaaaaacaat 22071600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 31147384 - 31147333
Alignment:
Q  128 acaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||| ||||||||||||  |||||| |||||||||||||||||||||||    
T  31147384 acaacttcgatgacaacttttattttctctcttcttattggtccaaaacaat 31147333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 34260010 - 34259931
Alignment:
Q  98 agagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaac 176  Q
    |||||| |||||| |||||||||||||| ||||||||||  ||||||  ||| |||||| |||||||||||||| |||||    
T  34260010 agagtaatgatatttgtacaaccatttggtgacaacttttgtgacaaacttctttttctctcttcttattggtcaaaaac 34259931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 25139848 - 25139926
Alignment:
Q  102 tagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttct-ttcttcttattggtccaaaacaat 179  Q
    |||||||||||| ||||||||||| |||||||||||| | ||||||  |||||| || || ||||||||| ||||||||    
T  25139848 tagtgatatatgaacaaccatttgggacaactttgatcataacttttattttctcttttttttattggtctaaaacaat 25139926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 33483993 - 33484075
Alignment:
Q  98 agagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||| |||||| |||||| ||| ||| ||||||||||| ||||||| || ||||||| ||||||||||| || ||||||||    
T  33483993 agagtaatgatatttgtacatccaattgatgacaactttggtgacaaccttacttttctctcttcttattgatcaaaaacaat 33484075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 15638313 - 15638232
Alignment:
Q  99 gagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||| |||||| ||| ||| ||||||||||| ||||||| ||  |||||| |||||||||||| | ||||||||    
T  15638313 gagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattggacaaaaacaat 15638232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 179
Target Start/End: Complemental strand, 19315049 - 19315008
Alignment:
Q  138 tgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||| ||||||||||||||||||||| ||||||||    
T  19315049 tgacaactttctttttctttcttcttattggtcaaaaacaat 19315008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 19315077 - 19315040
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaacttt 135  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  19315077 agagtagtgatatttgtacaaccatttgtgacaacttt 19315040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 4489685 - 4489749
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttctt 160  Q
    ||||||||||||||||||||||||  ||||  |||||||| |||||||||||  |||||| ||||    
T  4489685 aaagagtagtgatatatgtacaactctttggtacaactttcatgacaactttaattttctatctt 4489749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 5234360 - 5234440
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||| || |||||||||||  ||||||||  |||||| |||  |||||| |||| ||||||||| ||||||||    
T  5234360 gagtagtgatatttgaacaaccatttgatacaacttttgtgacaattttttttttctctctttttattggtcaaaaacaat 5234440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 29526040 - 29525960
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||||| |||||||  | || |||| ||||||||||  |||  | |||||| ||||||||||||||||    
T  29526040 gagtagtgatatatgtacatccatttggtataattttgttgacaactttaatttgttctcttctcattggtccaaaacaat 29525960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 46912728 - 46912768
Alignment:
Q  139 gacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  46912728 gacaactttcattttctctcttcttattggtccaaaacaat 46912768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 44133716 - 44133633
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||| ||||||| |||||||| || | | |||||||| |||| ||||||  ||| || ||||| |||||||||||||||||    
T  44133716 aaagagttgtgatatttgtacaactatatctaacaactttaatgataacttttatttactctcttcctattggtccaaaacaat 44133633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 19720529 - 19720575
Alignment:
Q  99 gagtagtgatatatgtacaaccatttg-tgacaactttgatgacaac 144  Q
    ||||||||||||||||||| |||||||  ||||||||||||||||||    
T  19720529 gagtagtgatatatgtacatccatttgaagacaactttgatgacaac 19720575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 20632535 - 20632617
Alignment:
Q  98 agagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||| |||||| ||| ||| |||||| |||| ||||||||||  |||| | ||||| |||||||| ||||||||    
T  20632535 agagtagtgatatttgtacatccaattgatgacaattttggtgacaactttatttttttctcttcctattggtcaaaaacaat 20632617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 29949596 - 29949642
Alignment:
Q  133 tttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||| |||||| |||||||||||||  ||||||||    
T  29949596 tttgatgacaactttctttttctctcttcttattggtaaaaaacaat 29949642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 39067850 - 39067924
Alignment:
Q  105 tgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||| ||| ||||||| | | ||||||||||||||||||||  ||| || ||||  |||||||||||||||||    
T  39067850 tgatatttgttcaaccatatctaacaactttgatgacaacttttatttactctctttctattggtccaaaacaat 39067924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 8026680 - 8026733
Alignment:
Q  126 tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||  ||||||||||  |||||| |||||||||||||| ||||||||    
T  8026680 tgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaat 8026733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 32365555 - 32365636
Alignment:
Q  99 gagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||||| | ||||  ||| ||||||||||| ||| ||  |||||| |||| ||||||||| ||||||||    
T  32365555 gagtagtgatatatgtacatctattttatgataactttgatgataacattatttttctctctttttattggtcaaaaacaat 32365636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 36728538 - 36728591
Alignment:
Q  126 tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||| ||||||||||  |||||| |||||||||||||  ||||||||    
T  36728538 tgacaactttggtgacaactttgtttttctctcttcttattggtaaaaaacaat 36728591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 38674054 - 38674005
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaacttt 147  Q
    ||||||||||||||||||||||||| ||| |||| ||| |||| ||||||    
T  38674054 agagtagtgatatatgtacaaccatatgtaacaattttaatgagaacttt 38674005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 27384350 - 27384310
Alignment:
Q  107 atatatgtacaaccatttgtgacaactttgatgacaacttt 147  Q
    |||| ||||||| |||||||||||| |||||||||||||||    
T  27384350 atatgtgtacaatcatttgtgacaattttgatgacaacttt 27384310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 143
Target Start/End: Original strand, 29406922 - 29406970
Alignment:
Q  95 taaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaa 143  Q
    |||||||||||||||||||||||||  ||||  |||||||| |||||||    
T  29406922 taaagagtagtgatatatgtacaactctttggtacaactttcatgacaa 29406970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 50159116 - 50159068
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaacttt 147  Q
    |||| ||||||| ||||||||||| ||| |||||||| |||||||||||    
T  50159116 gagttgtgatatttgtacaaccatatgtaacaactttaatgacaacttt 50159068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 6e-24; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 8074614 - 8074694
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||||||| ||| | ||||||||||||||||||||||| |||||| ||||||||||||| |||||||||    
T  8074614 gagtagtgatatatgtacaatcatatttgacaactttgatgacaactttcattttctctcttcttattggttcaaaacaat 8074694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 27631132 - 27631049
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |  |||||| |||| | ||||||| ||||||||    
T  27631132 aaagagtagtgatatatgtacaaccattggtgacaactttgatgacaactattattttctctcttttcattggtcaaaaacaat 27631049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 41304870 - 41304951
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||  ||||| |||||||||||||||| ||||||||||  |||||| |||||| ||||||||||||||||    
T  41304870 agagtagtgatatattgacaacaatttgtgacaactttgttgacaacttttattttctctcttctcattggtccaaaacaat 41304951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 11155768 - 11155819
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaacttt 147  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11155768 aaagagtagtgatatatgtagaaccatttgtgacaactttgatgacaacttt 11155819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 29910098 - 29910181
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||||  |||||||||| ||||||||||| ||||||||||  |||||| |||||| |||||| |||||||||    
T  29910098 aaagagtagtgatatattgacaaccatttttgacaactttgttgacaacttttattttctctcttctcattggttcaaaacaat 29910181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 5642290 - 5642359
Alignment:
Q  110 tatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||| ||||| || ||||||||||||||||||  |||||| |||||||||||||||||||||||    
T  5642290 tatgtacaactatttgagataactttgatgacaacttttattttctctcttcttattggtccaaaacaat 5642359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 5644231 - 5644300
Alignment:
Q  110 tatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||| ||||| || ||||||||||||||||||  |||||| |||||||||||||||||||||||    
T  5644231 tatgtacaactatttgagataactttgatgacaacttttattttctctcttcttattggtccaaaacaat 5644300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 34996246 - 34996321
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtcc 171  Q
    |||||||||||||||||||||||| |||||  ||||||||||||||||||||| ||| || |||| | ||||||||    
T  34996246 aaagagtagtgatatatgtacaactatttggtacaactttgatgacaactttcatttgctctcttttcattggtcc 34996321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 323975 - 324049
Alignment:
Q  105 tgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||| ||||||||||| | | ||||||||||||||||||||  ||| || |||||||||||||||||||||||    
T  323975 tgatatctgtacaaccatatctaacaactttgatgacaacttttatttactctcttcttattggtccaaaacaat 324049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 2768347 - 2768266
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||| |||| ||||||||| ||||||| |  |||||||||||  ||| |||||||||||||||| ||||||||    
T  2768347 agagtagtgatatttgtagaaccatttgcgacaactattgtgacaactttctctttgtttcttcttattggtcaaaaacaat 2768266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 5924993 - 5924916
Alignment:
Q  99 gagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    ||||||||||||||||||| ||||||| |||||||||| |||||||| ||  |||||| |||||||||||||| ||||    
T  5924993 gagtagtgatatatgtacatccatttgatgacaactttcatgacaaccttatttttctctcttcttattggtcaaaaa 5924916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 178
Target Start/End: Complemental strand, 7129716 - 7129636
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaa 178  Q
    ||||||||||||| ||||||  |||||   ||||||||||||||||||||  |||||| |||||||||||||| |||||||    
T  7129716 agagtagtgatatttgtacattcatttcatacaactttgatgacaactttgtttttctctcttcttattggtcaaaaacaa 7129636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 179
Target Start/End: Original strand, 37562031 - 37562110
Alignment:
Q  101 gtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||| |||||| ||| ||| ||||||||||||||||||| ||  |||||| |||||||||||||| ||||||||    
T  37562031 gtagtgatatttgtacatccaattgatgacaactttgatgacaaccttgtttttctctcttcttattggtcaaaaacaat 37562110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 42026556 - 42026474
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||| ||||||||| || |||| ||||||| ||||||||||||| |  |||||| |||| ||||||||| ||||||||    
T  42026556 aagagtagtaatatatgtataatcattggtgacaattttgatgacaactattattttctctctttttattggtcaaaaacaat 42026474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 154481 - 154392
Alignment:
Q  90 tttaataaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||| ||||||||||||||| || ||||||| ||  ||||||| |  ||||||||||| |||||| |||| ||||||||| ||||||||    
T  154481 tttaacaaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtcaaaaacaat 154392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 5925238 - 5925161
Alignment:
Q  99 gagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    ||||||||||||||||||| ||||||| |||||||||| |||||||| ||  |||||| | |||||||||||| ||||    
T  5925238 gagtagtgatatatgtacatccatttgatgacaacttttatgacaaccttatttttctctattcttattggtcaaaaa 5925161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 175
Target Start/End: Complemental strand, 30129588 - 30129515
Alignment:
Q  103 agtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    |||||||| |||||| ||| ||| ||||||||||| |||||||||| ||||||| |||||||||||||| ||||    
T  30129588 agtgatatttgtacatccaattgatgacaactttggtgacaactttgcttttctctcttcttattggtcaaaaa 30129515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 172
Target Start/End: Complemental strand, 35594723 - 35594653
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtcca 172  Q
    ||||||||||||||||||||||||||       |||||||||||||||||||| |||||| |||| |||||||||||    
T  35594723 aaagagtagtgatatatgtacaaccac------caactttgatgacaactttcattttctctctttttattggtcca 35594653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 2597046 - 2597129
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||| ||||||  || ||| ||||||||||| ||||||| ||  |||||| |||||||||||||| ||||||||    
T  2597046 aagagtagtgatatttgtacattcaattgatgacaactttggtgacaaccttgtttttctctcttcttattggtcaaaaacaat 2597129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 10653665 - 10653720
Alignment:
Q  92 taataaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaacttt 147  Q
    ||||||||||| ||||||| ||||||||||| | | ||||||||||||||||||||    
T  10653665 taataaagagttgtgatatttgtacaaccatatctaacaactttgatgacaacttt 10653720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 43605555 - 43605638
Alignment:
Q  97 aagagtagtgatatatgtacaaccattt-gtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||| |||||| || |||||| ||| |||||||||||  ||||||| | |||||||| |||||||||||||| ||||||||    
T  43605555 aagagtaatgatatttgaacaaccttttagtgacaacttttgtgacaacctaccttttctctcttcttattggtcaaaaacaat 43605638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 10344512 - 10344434
Alignment:
Q  98 agagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    |||||||||||||||||||| | ||||| | |||||||| |||||||| ||  ||||||||||| ||||||||| ||||    
T  10344512 agagtagtgatatatgtacatctatttgataacaacttttatgacaaccttgtttttctttctttttattggtcaaaaa 10344434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 11789954 - 11789904
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttc 148  Q
    ||||||||||||| |||||||| |||||||| | |||||||||||||||||    
T  11789954 agagtagtgatatttgtacaactatttgtgatatctttgatgacaactttc 11789904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 28623008 - 28623094
Alignment:
Q  96 aaagagtagtgatatatgtacaacca---tttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||| |||||| |||   ||  ||||||||||| ||||||| || ||||||| | |||||||||||| ||||||||    
T  28623008 aaagagtagtgatatttgtacatccaatattgatgacaactttggtgacaaccttgcttttctcttttcttattggtcaaaaacaat 28623094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 11139080 - 11139002
Alignment:
Q  98 agagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    ||||||||||||| |||||| | | ||| ||||||||||| ||||||||||  |||||| |||| ||||||||| ||||    
T  11139080 agagtagtgatatttgtacatcaaattgatgacaactttggtgacaactttgtttttctatctttttattggtcaaaaa 11139002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 20994973 - 20995027
Alignment:
Q  125 gtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||  ||||||| | |||||||| |||||||||||||| ||||||||    
T  20994973 gtgacaacttttgtgacaacctaccttttctctcttcttattggtcaaaaacaat 20995027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 34810520 - 34810574
Alignment:
Q  91 ttaataaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaact 145  Q
    ||||| ||||| |||||||| ||||||| ||| |||||||| |||||||||||||    
T  34810520 ttaattaagaggagtgatatttgtacaatcatgtgtgacaattttgatgacaact 34810574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 9550312 - 9550373
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttctt 160  Q
    |||||||||||||||||||||  ||||  |||||||| |||||||||||  |||||| ||||    
T  9550312 gagtagtgatatatgtacaactctttgatacaactttcatgacaactttaattttctatctt 9550373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 6005110 - 6005046
Alignment:
Q  115 acaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||  |||||||   |||||||||||||||||| |||| | ||||||| ||||||||    
T  6005110 acaaccatttggtacaacttatttgacaactttccttttctctcttttcattggtcaaaaacaat 6005046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 179
Target Start/End: Complemental strand, 23258218 - 23258134
Alignment:
Q  95 taaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||| || |||||||||||  |||| |||  |||||||||   |||||| |||| | ||||||| ||||||||    
T  23258218 taaagagtagtgatatttgaacaaccatttgaaacaatttttgtgacaacttcttttttctctcttttcattggtcaaaaacaat 23258134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 40719533 - 40719609
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    |||||||||||||||||||||  |||   |||||||| |||||||||||  |||||| |||| | ||||||| ||||    
T  40719533 gagtagtgatatatgtacaactctttcgtacaacttttatgacaactttggttttctctcttttgattggtcaaaaa 40719609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 41005946 - 41005870
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    ||||||||||||||| ||||  ||||| || || || ||||| ||||||  |||||| |||||| ||||||||||||    
T  41005946 gagtagtgatatatgcacaattatttgggataatttagatgataacttttattttctctcttctcattggtccaaaa 41005870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 21469 - 21542
Alignment:
Q  105 tgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaa 178  Q
    |||||||||||||| ||||||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  21469 tgatatatgtacaatcatttgtgacaactttgataacaactttcattttctctcttctcattggtccaaaacaa 21542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 546273 - 546354
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||  |||||||||||||||||||||| ||||||||||  |||||| |||||| ||||||||||||||||    
T  546273 agagtagtgatatattgacaaccatttgtgacaactttgttgacaacttttattttctctcttctcattggtccaaaacaat 546354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 7497878 - 7497960
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||  |||||||||||||||||||||| ||||||||||  |||||| |||||| |||||| |||||||||    
T  7497878 aagagtagtgatatattgacaaccatttgtgacaactttgttgacaacttttattttctctcttctcattggttcaaaacaat 7497960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 10389401 - 10389323
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaaca 177  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||||||  ||||| |||||| ||||||||||||||    
T  10389401 gagtagtgatatatgtacaaccatttgggacaactttggtgacgactttcactttctctcttctcattggtccaaaaca 10389323  T

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Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 2308213 - 2308282
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattgg 168  Q
    |||||||||||| ||||||||||| | ||||||||||||||||||||||| |||||| |||||| |||||    
T  2308213 gagtagtgatatttgtacaaccatatatgacaactttgatgacaactttcattttctctcttctcattgg 2308282  T

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Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 42665700 - 42665781
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||| ||||||||||||||  ||||||||||||||||||||| ||| || | || | ||||||||||||||||    
T  42665700 agagtagtgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctcttttttcattggtccaaaacaat 42665781  T

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Target: chr2; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 36909732 - 36909812
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||| |||||| ||||||   ||||||||||||||||||||  |||||| |||||||||||||| ||||||||    
T  36909732 gagtagtgatatttgtacatccatttcatacaactttgatgacaactttgtttttctctcttcttattggtcaaaaacaat 36909812  T

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Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 35965764 - 35965684
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||||||||||||| ||| ||||||||||| ||||||   ||||| | |||| |||||| |||||||||    
T  35965764 gagtagtgatatatgtacaaccatttatgagaactttgatgataacttttactttctctattctcattggttcaaaacaat 35965684  T

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Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 178
Target Start/End: Complemental strand, 6666201 - 6666123
Alignment:
Q  100 agtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaa 178  Q
    |||||||||||||  | || |||||||||||| |||| ||||||||||  |||||| |||||| |||||||||||||||    
T  6666201 agtagtgatatattgataatcatttgtgacaattttgttgacaacttttattttctctcttctcattggtccaaaacaa 6666123  T

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Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 42554957 - 42554900
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttct 155  Q
    |||||||||||||| |||||||||||||  ||||||||||| ||||||||| ||||||    
T  42554957 agagtagtgatataagtacaaccatttggtacaactttgataacaactttcattttct 42554900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 11442854 - 11442774
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||||| |||||||  ||||||||| ||||||||||  |||  | |||| | ||||||||||||||||    
T  11442854 gagtagtgatatatgtacatccatttggtacaactttgttgacaactttaatttgttctcttttcattggtccaaaacaat 11442774  T

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Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 34261912 - 34261948
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgtgacaactt 134  Q
    |||||||||||||||||||||||||||||||||||||    
T  34261912 agagtagtgatatatgtacaaccatttgtgacaactt 34261948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 40496526 - 40496452
Alignment:
Q  105 tgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||| ||||||||||| | | | ||||||||||||||||||  ||| || ||||| |||||||||||||||||    
T  40496526 tgatatttgtacaaccatatctaataactttgatgacaacttttatttactctcttcctattggtccaaaacaat 40496452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 179
Target Start/End: Complemental strand, 12358492 - 12358415
Alignment:
Q  103 agtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||| |||||| ||| ||| ||||||||||| ||||||| || ||||||| |||| ||||||||| ||||||||    
T  12358492 agtgatatttgtacatccaattgatgacaactttggtgacaaccttgcttttctatctttttattggtcaaaaacaat 12358415  T

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Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 10749568 - 10749648
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||| || |||||||||| |||||||| | |||||||||| | ||| || ||||  |||||||| ||||||||    
T  10749568 gagtagtgatatttgaacaaccatttttgacaactatcatgacaacttccttttcctctctttctattggtcaaaaacaat 10749648  T

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Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 15226946 - 15227026
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||||| | || |   |||||||| |||| ||||||  |||| |||||||||||||||| ||||||||    
T  15226946 gagtagtgatatatgtacatctatgttgaacaactttcatgataactttgtttttatttcttcttattggtcaaaaacaat 15227026  T

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Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 25994271 - 25994235
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaacttt 135  Q
    ||||||||||||||||||||| |||||||||||||||    
T  25994271 gagtagtgatatatgtacaactatttgtgacaacttt 25994235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 33857371 - 33857319
Alignment:
Q  127 gacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||| ||||||||||  |||||| |||||||||||||| ||||||||    
T  33857371 gacaactttggtgacaactttatttttctgtcttcttattggtcaaaaacaat 33857319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 43791676 - 43791760
Alignment:
Q  96 aaagagtagtgatatatgtacaaccattt-gtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||| |||||| || |||||| ||| |||||||||||  ||||||| | |||||||| |||| ||||||||| ||||||||    
T  43791676 aaagagtaatgatatttgaacaaccttttagtgacaacttttgtgacaacctaccttttctctctttttattggtcaaaaacaat 43791760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 25994244 - 25994205
Alignment:
Q  138 tgacaactttccttttctttcttcttattggtccaaaaca 177  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  25994244 tgacaactttcattttctctcttcttattggtccaaaaca 25994205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 31847716 - 31847669
Alignment:
Q  98 agagtagtgatatatgtacaaccatttgt-gacaactttgatgacaac 144  Q
    |||||||||||||||||||| |||||||| ||||||||| ||||||||    
T  31847716 agagtagtgatatatgtacatccatttgtagacaactttcatgacaac 31847669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 175
Target Start/End: Complemental strand, 36795911 - 36795836
Alignment:
Q  100 agtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaa 175  Q
    |||| ||||||||||||||| ||||  |||||||||||||| | ||||| |||||| | || ||||||||| ||||    
T  36795911 agtaatgatatatgtacaactatttaggacaactttgatgatagctttcattttctctttttttattggtcaaaaa 36795836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 10550346 - 10550428
Alignment:
Q  98 agagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||| |||||| || ||| ||||||| ||||||||||| ||||||||||  |||||| | || ||||||||| ||||||||    
T  10550346 agagtaatgatatttggacatccatttgatgacaactttgttgacaactttgtttttctctatttttattggtcaaaaacaat 10550428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 29582303 - 29582349
Alignment:
Q  133 tttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||| |||||| |||||||||||||  ||||||||    
T  29582303 tttgatgacaactttctttttctctcttcttattggtaaaaaacaat 29582349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 38912488 - 38912570
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||| |||||||||||||||||||||  |||||||| || | ||||||| |||  |||||| | |||| || ||||||||    
T  38912488 aagagtaatgatatatgtacaaccatttggtacaactttaataataactttcatttgttttcttttcattgatctaaaacaat 38912570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 30973879 - 30973960
Alignment:
Q  99 gagtagtgatatatgtacaaccatttg-tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||| ||| |||||||  ||||| |||||||| ||||||  ||||||  ||| ||||||||| ||||||||    
T  30973879 gagtagtgatatatgaacatccatttgaagacaattttgatgataactttgtttttctcactttttattggtcaaaaacaat 30973960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 44484572 - 44484625
Alignment:
Q  126 tgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||  ||||||||||  |||||| |||||||||||||| ||||||||    
T  44484572 tgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaat 44484625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 44411038 - 44411074
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaacttt 135  Q
    |||||||||||||||||||| |||||| |||||||||    
T  44411038 gagtagtgatatatgtacaatcatttgggacaacttt 44411074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 16576 - 16493
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||||  |||||||||| ||||||||||| ||||||||||  |||||| | |||| ||||||||| ||||||    
T  16576 aaagagtagtgatatattgacaaccatttatgacaactttgttgacaacttttattttctctattctcattggtccataacaat 16493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 29702 - 29779
Alignment:
Q  102 tagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||| ||| || || |||||| |||||||||||||||||||||| |||||| |||| | ||||||||||||||||    
T  29702 tagtgatgtatatataatcatttgggacaactttgatgacaactttcattttctctcttttcattggtccaaaacaat 29779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 179
Target Start/End: Complemental strand, 4493 - 4417
Alignment:
Q  102 tagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |  |||||| |||| | |||||| |||||||||    
T  4493 tagtgatatatgtacaaccattggtgacaactttgatgacaactattattttctctcttttcattggt-caaaacaat 4417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 36757 - 36837
Alignment:
Q  99 gagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||| ||||||||  |||| ||||| ||||||||||| ||||||||||  |||||| |||||| ||||||||||||||||    
T  36757 gagtattgatatattgacaatcatttttgacaactttgttgacaacttttattttctctcttctcattggtccaaaacaat 36837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 14436 - 14518
Alignment:
Q  97 aagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    ||||||||||||||||||||| |||||||  ||||||||| |||||| |||  |||  | |||||| ||||||||||||||||    
T  14436 aagagtagtgatatatgtacatccatttggtacaactttgttgacaattttaatttgttctcttctcattggtccaaaacaat 14518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 59702 - 59761
Alignment:
Q  96 aaagagtagtgatatatgtacaaccatttgtgacaactttgatgacaactttccttttct 155  Q
    |||||||| ||||||||||||||  ||||||||||||||| || ||||| ||| ||||||    
T  59702 aaagagtaatgatatatgtacaataatttgtgacaactttaataacaacattcattttct 59761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 60615 - 60569
Alignment:
Q  133 tttgatgacaactttccttttctttcttcttattggtccaaaacaat 179  Q
    |||||||||||||||| |||||| |||| | ||||||||||||||||    
T  60615 tttgatgacaactttcattttctctcttttcattggtccaaaacaat 60569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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