View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4183_high_17 (Length: 241)
Name: NF4183_high_17
Description: NF4183
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4183_high_17 |
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Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 32828725 - 32828499
Alignment:
| Q |
1 |
aattggaggctgtggagggtgatgggaaagaggaattagaggttgtggatgttgataataaagaggggtttaaatattttacccgaaggaagtttaagtc |
100 |
Q |
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| T |
32828725 |
aattggaggctgtggagggtgatgggaaagaggaaatagaggttgtggaggttgataataaagaggggtttaaatattttacccgaaggaagtttaagtc |
32828626 |
T |
|
| Q |
101 |
gaagaagagaacgaggagagttgaagcgacgaagggtgatcaaaggcttgaggaaaatgagtgtccactggggttggatgagagtaagagtcaagaactg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |
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| T |
32828625 |
gaagaagagaacgaggagagttgaagcgacgaagggtgatcaaaggcttgaggaaaatgagtgtccagtggggttggatgagagtaagagtcaagaagtg |
32828526 |
T |
|
| Q |
201 |
gagcttgtagttgtattggacacaggt |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
32828525 |
gagcttgtagttgtattggacacaggt |
32828499 |
T |
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