View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4185_high_9 (Length: 328)
Name: NF4185_high_9
Description: NF4185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4185_high_9 |
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Alignment Details
Target: chr6 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 1431161 - 1431484
Alignment:
| Q |
1 |
ttagctagtgcatgatcttgaccgtcctctaacacaggaacttcgatcgaacgctcgagaatcggtatagcctcgttgtactgtcctaaattacagtata |
100 |
Q |
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| T |
1431161 |
ttagctagtgcatgatcttgaccatcctctaacacaggaacttcgatcgaacgctcgagaatcggtatagcctcgttgtactgtcctaaattacagtata |
1431260 |
T |
|
| Q |
101 |
ttgtggccaatacatgaagacacatcaccaattccaaacttggtttaccatcttcattacatatctcaaatgatttcaaagctctaagaccaaaattgag |
200 |
Q |
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| T |
1431261 |
ttgtggccaatacatgaagacacatcaccaattccaaacttggtttaccatcttcattacatatctcaaatgatttcaaagctctaagaccaaaattgag |
1431360 |
T |
|
| Q |
201 |
agccttgttcggattctcacccgaagatatcatatctctcgttatcttcaacaagaacggtccaagatcaggattatctaactcgtcaacaataccgtcc |
300 |
Q |
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| T |
1431361 |
agccttgttcggattctcacccgaagatatcatatctctcgttatcttcaacaagaacggtccaagatcaggattatctaactcgtcaacaataccgtcc |
1431460 |
T |
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| Q |
301 |
ttcaaaccaagcctcctatgcttc |
324 |
Q |
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||||||||||||||| |||||||| |
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| T |
1431461 |
ttcaaaccaagcctcttatgcttc |
1431484 |
T |
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