View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4186_high_11 (Length: 332)
Name: NF4186_high_11
Description: NF4186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4186_high_11 |
 |  |
|
| [»] scaffold0160 (3 HSPs) |
 |  |  |
|
| [»] scaffold0121 (1 HSPs) |
 |  |  |
|
| [»] scaffold0119 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr1 (Bit Score: 110; Significance: 2e-55; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 51487677 - 51487809
Alignment:
| Q |
19 |
tatgttgcccttaaatttaatgcagcatgttttgcaaaatgtgggaattgcttttttgatgtcatgtcctgtgattgttattgtcatactaata--tata |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||| |
|
|
| T |
51487677 |
tatgttgcccttaaatttaatgcagcatgttttgcaaaatgtgggaattgcttttttgatgtcatgtcctgtgaatgtttttgtcatactaatactaata |
51487776 |
T |
 |
| Q |
117 |
aagtacagttgagcctttagtgaaagaaactat |
149 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
51487777 |
aagtacagttgagcctttagtgaaagaaactat |
51487809 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 215 - 303
Target Start/End: Complemental strand, 35597850 - 35597757
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaac-----catatttcctaatttccctcctcc |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
35597850 |
tgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaatcatatttcctaattcccctcctcc |
35597757 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 215 - 303
Target Start/End: Complemental strand, 35598285 - 35598192
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
35598285 |
tgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc |
35598192 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 212 - 303
Target Start/End: Complemental strand, 39514339 - 39514243
Alignment:
| Q |
212 |
caatgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc |
303 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
39514339 |
caatgttgccctagttccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc |
39514243 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 303
Target Start/End: Complemental strand, 2052194 - 2052101
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc |
303 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| |||| ||||||| ||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
2052194 |
tgttgccctaattccaactaatatttaacctaaaaaattatagccacttttctctccttcaaaacctaaccatatttcctaattcccctcctcc |
2052101 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 212 - 280
Target Start/End: Complemental strand, 38211879 - 38211811
Alignment:
| Q |
212 |
caatgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc |
280 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||| |
|
|
| T |
38211879 |
caatgttgcactaattccacctaatatttaacctaaaaaattgtagccatttttccctcctttaaaacc |
38211811 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 51488700 - 51488769
Alignment:
| Q |
146 |
ctatatcgacagaaactcgatacttccctat-----attctacacaaaagtataatgatattggaataca |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
51488700 |
ctatatcgacagaaactcgatacttccctatgttatattctacacaaaagtataatgatattggattaca |
51488769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 303
Target Start/End: Complemental strand, 45507356 - 45507290
Alignment:
| Q |
242 |
acctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc |
303 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
45507356 |
acctaaaaaattgtagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc |
45507290 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 303
Target Start/End: Complemental strand, 45507532 - 45507439
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaa-attgtagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc |
303 |
Q |
| |
|
||||| |||||||| ||||||||||||||||||||| |||||||| | |||||| | |||||||||| ||||||||||||| ||||||||| |
|
|
| T |
45507532 |
tgttgtcctaattc-acctaatatttaacctaaaaatattgtagccatttttcctttcttcaaaacctaactatatttcctaattcccctcctcc |
45507439 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0160 (Bit Score: 62; Significance: 9e-27; HSPs: 3)
Name: scaffold0160
Description:
Target: scaffold0160; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 215 - 303
Target Start/End: Original strand, 36039 - 36132
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc |
303 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| || |||||| |
|
|
| T |
36039 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagccacttttccctccttcaaaacctaaccatatttcctaattcccatcctcc |
36132 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0160; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 280
Target Start/End: Original strand, 36363 - 36401
Alignment:
| Q |
242 |
acctaaaaaattgtagctacttttccctccttcaaaacc |
280 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
36363 |
acctaaaaaattgtagccacttttccctccttcaaaacc |
36401 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0160; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 303
Target Start/End: Original strand, 36215 - 36281
Alignment:
| Q |
242 |
acctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc |
303 |
Q |
| |
|
||||||||||||||| | |||||||||||||| || ||||||||||||||||| ||||||||| |
|
|
| T |
36215 |
acctaaaaaattgtacccacttttccctcctttaaaacctaaccatatttcctaattcccctcctcc |
36281 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 62; Significance: 9e-27; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 215 - 303
Target Start/End: Original strand, 23179256 - 23179349
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
23179256 |
tgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc |
23179349 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 215 - 303
Target Start/End: Original strand, 23179447 - 23179540
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
23179447 |
tgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc |
23179540 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 280
Target Start/End: Original strand, 20844904 - 20844969
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc |
280 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
20844904 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagccactttttcctccttcaaaacc |
20844969 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 20842269 - 20842355
Alignment:
| Q |
222 |
ctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc |
303 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
20842269 |
ctaattccacctaatatttaacttaaaaaattgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctcc |
20842355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 303
Target Start/End: Original strand, 20844660 - 20844753
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| | | ||||||||| ||||||||| ||||||||||||| ||||||||| |
|
|
| T |
20844660 |
tgttgccctaattccacctaatatttaacctaaaaaattgtggtcatttttccctcattcaaaacctaacgatatttcctaattcccctcctcc |
20844753 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 303
Target Start/End: Original strand, 20844440 - 20844506
Alignment:
| Q |
242 |
acctaaaaaattgtagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc |
303 |
Q |
| |
|
||||||||||||||||| | ||||||||||||||||||| ||||||| ||||| ||||||||| |
|
|
| T |
20844440 |
acctaaaaaattgtagccatttttccctccttcaaaacctaaccatatttcataattcccctcctcc |
20844506 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 280
Target Start/End: Original strand, 20845080 - 20845118
Alignment:
| Q |
242 |
acctaaaaaattgtagctacttttccctccttcaaaacc |
280 |
Q |
| |
|
|||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
20845080 |
acctaaaaaattgtggccacttttccctccttcaaaacc |
20845118 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 62; Significance: 9e-27; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 215 - 303
Target Start/End: Complemental strand, 41862341 - 41862248
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
41862341 |
tgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc |
41862248 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 303
Target Start/End: Original strand, 22673749 - 22673842
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc |
303 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
22673749 |
tgttgccctaattccaactaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc |
22673842 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 280
Target Start/End: Complemental strand, 41946860 - 41946795
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc |
280 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
41946860 |
tgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacc |
41946795 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 303
Target Start/End: Original strand, 52680175 - 52680268
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc |
303 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| |||| ||||||| ||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
52680175 |
tgttgccctaattccaactaatatttaacctaaaaaattatagccacttttctctccttcaaaacctaaccatatttcctaattcccctcctcc |
52680268 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 280
Target Start/End: Complemental strand, 41862516 - 41862467
Alignment:
| Q |
231 |
cctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc |
280 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||| ||||| ||||||||| |
|
|
| T |
41862516 |
cctaatatttaacctaaaaaattatagccactttaccctctttcaaaacc |
41862467 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 62; Significance: 9e-27; HSPs: 16)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 215 - 303
Target Start/End: Original strand, 18199259 - 18199352
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
18199259 |
tgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc |
18199352 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 215 - 303
Target Start/End: Complemental strand, 36094093 - 36094000
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
36094093 |
tgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc |
36094000 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 215 - 303
Target Start/End: Complemental strand, 36094284 - 36094191
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
36094284 |
tgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaacaatatttcctaattcccctcctcc |
36094191 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 216 - 280
Target Start/End: Original strand, 851130 - 851194
Alignment:
| Q |
216 |
gttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc |
280 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
851130 |
gttgccctaattccacctaatatttaacctaaaaaattgtagccacttttccctccttcaaaacc |
851194 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 280
Target Start/End: Original strand, 26943801 - 26943866
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc |
280 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
26943801 |
tgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacc |
26943866 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 217 - 303
Target Start/End: Complemental strand, 18256901 - 18256810
Alignment:
| Q |
217 |
ttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc |
303 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
18256901 |
ttgccgtaattccacctaatatttaagctaaaaaattgtagtcacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc |
18256810 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 280
Target Start/End: Original strand, 26943610 - 26943675
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc |
280 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
26943610 |
tgttgccataattccacctaatatttaacctaaaaaattatagtcacttttccctccttcaaaacc |
26943675 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 280
Target Start/End: Complemental strand, 52419649 - 52419585
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc |
280 |
Q |
| |
|
||||||| ||||| ||||||||||||||||||||| | ||||| ||||||||||||||||||||| |
|
|
| T |
52419649 |
tgttgccttaattatacctaatatttaacctaaaaa-tcgtagccacttttccctccttcaaaacc |
52419585 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 303
Target Start/End: Original strand, 855059 - 855125
Alignment:
| Q |
242 |
acctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc |
303 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
855059 |
acctaaaaaattgtagacacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc |
855125 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 303
Target Start/End: Complemental strand, 6953937 - 6953848
Alignment:
| Q |
217 |
ttgccctaattccacctaatattt-aacctaaaaaattgtagctacttttccctccttcaaaa-----ccatatttcctaatttccctcctcc |
303 |
Q |
| |
|
||||||||||| || |||||||| ||||||||| ||||||| ||||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
6953937 |
ttgccctaattatacttaatattttaacctaaaa--ttgtagc-acttttccctccttcaaaatctaaccatatttcctaattcccctcctcc |
6953848 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 303
Target Start/End: Complemental strand, 49566082 - 49566029
Alignment:
| Q |
255 |
tagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc |
303 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
49566082 |
tagcaacttttccctccttcaaaacctaaccatatttcctaatttccctcctcc |
49566029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 303
Target Start/End: Complemental strand, 6953387 - 6953327
Alignment:
| Q |
248 |
aaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc |
303 |
Q |
| |
|
||||||||| | ||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
6953387 |
aaaattgtaaccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc |
6953327 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 303
Target Start/End: Complemental strand, 6953769 - 6953709
Alignment:
| Q |
248 |
aaaattgtagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc |
303 |
Q |
| |
|
||||||||| | ||||||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
6953769 |
aaaattgtaaccacttttccctccttcaaaacctaactatatttcctaattcccctcctcc |
6953709 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 280
Target Start/End: Complemental strand, 36947682 - 36947650
Alignment:
| Q |
248 |
aaaattgtagctacttttccctccttcaaaacc |
280 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |
|
|
| T |
36947682 |
aaaattgtagccacttttccctccttcaaaacc |
36947650 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 280
Target Start/End: Complemental strand, 36947821 - 36947789
Alignment:
| Q |
248 |
aaaattgtagctacttttccctccttcaaaacc |
280 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |
|
|
| T |
36947821 |
aaaattgtagccacttttccctccttcaaaacc |
36947789 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 280
Target Start/End: Complemental strand, 36947960 - 36947928
Alignment:
| Q |
248 |
aaaattgtagctacttttccctccttcaaaacc |
280 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |
|
|
| T |
36947960 |
aaaattgtagccacttttccctccttcaaaacc |
36947928 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 62; Significance: 9e-27; HSPs: 18)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 215 - 280
Target Start/End: Complemental strand, 1925772 - 1925707
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc |
280 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
1925772 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagatacttttccctccttcaaaacc |
1925707 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 214 - 280
Target Start/End: Complemental strand, 35433269 - 35433203
Alignment:
| Q |
214 |
atgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc |
280 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
35433269 |
atgttgccctaattccacctaatatttaacctaaaaagttgtagccacttttccctccttcaaaacc |
35433203 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 303
Target Start/End: Original strand, 13899815 - 13899908
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc |
303 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
13899815 |
tgttgccctaattccaccgaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattaccctcctcc |
13899908 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 303
Target Start/End: Original strand, 13905713 - 13905806
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc |
303 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
13905713 |
tgttgccctaattccacctaatatttaacccaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc |
13905806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 216 - 280
Target Start/End: Complemental strand, 27999782 - 27999718
Alignment:
| Q |
216 |
gttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc |
280 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
27999782 |
gttgccctaattccacctaatatttaacctaaaaaattgtagccacttttccctccttcataacc |
27999718 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 216 - 280
Target Start/End: Complemental strand, 28090516 - 28090452
Alignment:
| Q |
216 |
gttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc |
280 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
28090516 |
gttgccctaattccacctaatatttaacctaaaaaattgtagccacttttccctccttcataacc |
28090452 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 216 - 280
Target Start/End: Complemental strand, 28096839 - 28096775
Alignment:
| Q |
216 |
gttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc |
280 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
28096839 |
gttgccctaattccacctaatatttaacctaaaaaattgtagccacttttccctccttcataacc |
28096775 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 303
Target Start/End: Original strand, 26453350 - 26453443
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc |
303 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| |||| ||||||| ||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
26453350 |
tgttgccctaattccaactaatatttaacctaaaaaattatagccacttttctctccttcaaaacctaaccatatttcctaattcccctcctcc |
26453443 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 303
Target Start/End: Original strand, 40603186 - 40603279
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc |
303 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| |||| ||||||| ||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
40603186 |
tgttgccctaattccaactaatatttaacctaaaaaattatagccacttttctctccttcaaaacctaaccatatttcctaattcccctcctcc |
40603279 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 215 - 265
Target Start/End: Original strand, 1271964 - 1272014
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctactttt |
265 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
1271964 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagccactttt |
1272014 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 280
Target Start/End: Complemental strand, 35433353 - 35433288
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc |
280 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| ||||||| ||||||| ||||||||||||| |
|
|
| T |
35433353 |
tgttgccctaattccacctaatatttaatttaaaaagttgtagccacttttctctccttcaaaacc |
35433288 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 266
Target Start/End: Complemental strand, 27999904 - 27999854
Alignment:
| Q |
216 |
gttgccctaattccacctaatatttaacctaaaaaattgtagctacttttc |
266 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| | ||||||| |
|
|
| T |
27999904 |
gttgccctaattccacctaatatttaacctaaaaaattgtaaccacttttc |
27999854 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 266
Target Start/End: Complemental strand, 28090638 - 28090588
Alignment:
| Q |
216 |
gttgccctaattccacctaatatttaacctaaaaaattgtagctacttttc |
266 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| | ||||||| |
|
|
| T |
28090638 |
gttgccctaattccacctaatatttaacctaaaaaattgtaaccacttttc |
28090588 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 266
Target Start/End: Complemental strand, 28096961 - 28096911
Alignment:
| Q |
216 |
gttgccctaattccacctaatatttaacctaaaaaattgtagctacttttc |
266 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| | ||||||| |
|
|
| T |
28096961 |
gttgccctaattccacctaatatttaacctaaaaaattgtaaccacttttc |
28096911 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 303
Target Start/End: Complemental strand, 35433092 - 35433026
Alignment:
| Q |
242 |
acctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc |
303 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
35433092 |
acctaaaatattgtagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc |
35433026 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 280
Target Start/End: Complemental strand, 1925596 - 1925558
Alignment:
| Q |
242 |
acctaaaaaattgtagctacttttccctccttcaaaacc |
280 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
1925596 |
acctaaaaaattgtagccacttttctctccttcaaaacc |
1925558 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 303
Target Start/End: Original strand, 26452895 - 26452948
Alignment:
| Q |
255 |
tagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc |
303 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
26452895 |
tagcaacttttccctccttcaaaacctaaccatatttcctaatttccctcctcc |
26452948 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 303
Target Start/End: Original strand, 32287404 - 32287464
Alignment:
| Q |
248 |
aaaattgtagctacttttccctccttcaaaac-----catatttcctaatttccctcctcc |
303 |
Q |
| |
|
||||||||| | |||||||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
32287404 |
aaaattgtaaccacttttccctccttcaaaacctaatcatatttcctaattcccctcctcc |
32287464 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 303
Target Start/End: Original strand, 13927081 - 13927173
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc |
303 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
13927081 |
tgttgccctaatttcacctaatatttaacctaaaaaattgtagccac-tttccctccttcaaaacctaactatatttcctaatttccctcctcc |
13927173 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 303
Target Start/End: Original strand, 22004230 - 22004323
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc |
303 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
22004230 |
tgttgccctaattccaccgaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattaccctcctcc |
22004323 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 303
Target Start/End: Original strand, 22004421 - 22004514
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc |
303 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
22004421 |
tgttgccctaattccacctaatatttaacccaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc |
22004514 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 303
Target Start/End: Original strand, 7891198 - 7891291
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc |
303 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| |||||| ||||| ||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
7891198 |
tgttgccctaattccaactaatatttaacctaaaaaattatagctatttttctctccttcaaaacctaaccatatttcctaattcccctcctcc |
7891291 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 303
Target Start/End: Complemental strand, 3600132 - 3600056
Alignment:
| Q |
230 |
acctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc |
303 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||||||| |||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
3600132 |
acctaatatttaacctaaaa--ttgtagccacttttccttccttcaaaacctaaccatatttcctaattcccctcctcc |
3600056 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 303
Target Start/End: Original strand, 7890743 - 7890796
Alignment:
| Q |
255 |
tagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc |
303 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
7890743 |
tagcaacttttccctccttcaaaacctaaccatatttcctaatttccctcctcc |
7890796 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 280
Target Start/End: Original strand, 29954217 - 29954275
Alignment:
| Q |
221 |
cctaattccacctaatattt-aacctaaaaaattgtagctacttttccctccttcaaaacc |
280 |
Q |
| |
|
||||||| ||||||||||| ||||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
29954217 |
cctaattatacctaatattttaacctaaaa--ttgtagccacttttccctccttcaaaacc |
29954275 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 280
Target Start/End: Original strand, 3589206 - 3589271
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc |
280 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||| |
|
|
| T |
3589206 |
tgttgccctaattccacctaatatttaacctaaaaaattatagccatttttccctccttcaaaacc |
3589271 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0121 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0121
Description:
Target: scaffold0121; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 303
Target Start/End: Original strand, 41147 - 41240
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc |
303 |
Q |
| |
|
|||||||||||||||| | ||||||||||| |||||||| |||| ||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
41147 |
tgttgccctaattccaacaaatatttaaccaaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc |
41240 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0119 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0119
Description:
Target: scaffold0119; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 215 - 265
Target Start/End: Complemental strand, 29273 - 29223
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctactttt |
265 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
29273 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagccactttt |
29223 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0119; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 215 - 265
Target Start/End: Complemental strand, 35526 - 35476
Alignment:
| Q |
215 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagctactttt |
265 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
35526 |
tgttgccctaattccacctaatatttaacctaaaaaattgtagccactttt |
35476 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 303
Target Start/End: Complemental strand, 18489864 - 18489804
Alignment:
| Q |
248 |
aaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc |
303 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
18489864 |
aaaattgtagtcacttttccctccttcaaaacataaccatatttcctaattcccctcctcc |
18489804 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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