View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4186_high_5 (Length: 464)

Name: NF4186_high_5
Description: NF4186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4186_high_5
NF4186_high_5
[»] chr8 (56 HSPs)
chr8 (17-241)||(3050834-3051058)
chr8 (307-459)||(3051124-3051276)
chr8 (327-452)||(9054785-9054910)
chr8 (311-452)||(6813691-6813833)
chr8 (313-449)||(23799527-23799664)
chr8 (21-109)||(3063232-3063320)
chr8 (347-449)||(6127265-6127368)
chr8 (361-452)||(7493121-7493212)
chr8 (112-236)||(3303474-3303596)
chr8 (313-449)||(5702433-5702570)
chr8 (313-449)||(26403180-26403317)
chr8 (107-236)||(43036665-43036792)
chr8 (376-449)||(30291620-30291695)
chr8 (103-239)||(12702426-12702562)
chr8 (310-448)||(28307568-28307707)
chr8 (28-109)||(3037267-3037347)
chr8 (108-232)||(5689513-5689635)
chr8 (319-458)||(19752335-19752475)
chr8 (313-448)||(7412351-7412486)
chr8 (345-452)||(5990509-5990615)
chr8 (319-402)||(19175753-19175835)
chr8 (339-448)||(4456064-4456173)
chr8 (195-236)||(40321318-40321359)
chr8 (376-449)||(1292543-1292617)
chr8 (376-449)||(3303750-3303824)
chr8 (110-232)||(41366420-41366539)
chr8 (319-402)||(31071228-31071310)
chr8 (108-186)||(15213075-15213155)
chr8 (107-236)||(19491502-19491628)
chr8 (131-240)||(44304093-44304201)
chr8 (339-402)||(1261953-1262015)
chr8 (152-236)||(1345221-1345301)
chr8 (378-452)||(8863574-8863646)
chr8 (382-449)||(6598986-6599054)
chr8 (202-236)||(6599211-6599245)
chr8 (382-449)||(6674439-6674507)
chr8 (202-236)||(6674664-6674698)
chr8 (146-236)||(8154024-8154109)
chr8 (195-236)||(18142056-18142097)
chr8 (108-177)||(4743027-4743098)
chr8 (339-387)||(26287937-26287985)
chr8 (339-387)||(26301194-26301242)
chr8 (339-387)||(26313188-26313236)
chr8 (107-162)||(3231645-3231700)
chr8 (339-402)||(18853166-18853229)
chr8 (339-402)||(18870560-18870623)
chr8 (339-402)||(36979413-36979475)
chr8 (382-429)||(3772225-3772274)
chr8 (386-449)||(40328793-40328857)
chr8 (345-402)||(4760074-4760130)
chr8 (313-370)||(9765849-9765906)
chr8 (195-232)||(10015321-10015358)
chr8 (195-236)||(18105960-18106001)
chr8 (107-176)||(4731957-4732027)
chr8 (376-449)||(41364927-41365001)
chr8 (392-452)||(42093128-42093188)
[»] chr3 (69 HSPs)
chr3 (339-453)||(21353598-21353712)
chr3 (333-452)||(4386865-4386984)
chr3 (107-234)||(29196188-29196314)
chr3 (313-448)||(8370428-8370563)
chr3 (319-449)||(48438230-48438361)
chr3 (313-449)||(18552823-18552960)
chr3 (319-449)||(25795797-25795928)
chr3 (313-449)||(1736245-1736382)
chr3 (313-448)||(21711233-21711368)
chr3 (313-449)||(3715942-3716079)
chr3 (358-450)||(8126685-8126778)
chr3 (108-236)||(9666270-9666396)
chr3 (313-449)||(36029103-36029240)
chr3 (313-449)||(40592722-40592859)
chr3 (343-458)||(3328288-3328403)
chr3 (319-449)||(40844668-40844798)
chr3 (313-458)||(1417422-1417567)
chr3 (313-446)||(30709733-30709867)
chr3 (319-460)||(37466307-37466448)
chr3 (310-398)||(25929435-25929522)
chr3 (376-449)||(32891117-32891192)
chr3 (107-236)||(44700283-44700409)
chr3 (108-236)||(27305519-27305641)
chr3 (358-458)||(3323622-3323722)
chr3 (313-402)||(27974941-27975029)
chr3 (319-407)||(16264366-16264453)
chr3 (107-236)||(23391711-23391838)
chr3 (339-449)||(26299024-26299135)
chr3 (345-449)||(47923845-47923951)
chr3 (108-236)||(21350811-21350933)
chr3 (376-450)||(32744516-32744590)
chr3 (345-449)||(24695104-24695209)
chr3 (357-398)||(25929365-25929406)
chr3 (363-451)||(5366263-5366351)
chr3 (106-175)||(29813361-29813432)
chr3 (357-448)||(35925534-35925625)
chr3 (107-236)||(22834806-22834932)
chr3 (319-402)||(32143337-32143419)
chr3 (107-236)||(39153163-39153290)
chr3 (313-387)||(27986449-27986523)
chr3 (347-452)||(29100203-29100309)
chr3 (198-240)||(32744335-32744377)
chr3 (345-402)||(6794702-6794758)
chr3 (107-236)||(761087-761212)
chr3 (386-451)||(9666556-9666623)
chr3 (376-449)||(22835082-22835156)
chr3 (376-449)||(23391989-23392063)
chr3 (319-387)||(33386669-33386737)
chr3 (376-449)||(39153441-39153515)
chr3 (339-402)||(26928590-26928652)
chr3 (319-402)||(27452974-27453056)
chr3 (107-177)||(32891388-32891459)
chr3 (195-236)||(23410216-23410257)
chr3 (195-236)||(31314683-31314724)
chr3 (376-449)||(760861-760935)
chr3 (392-452)||(25517071-25517131)
chr3 (376-449)||(29196466-29196541)
chr3 (376-449)||(29682373-29682447)
chr3 (339-402)||(2671585-2671647)
chr3 (339-402)||(7167280-7167342)
chr3 (339-402)||(8477398-8477460)
chr3 (339-402)||(8739062-8739124)
chr3 (339-402)||(9091300-9091362)
chr3 (376-448)||(9581297-9581370)
chr3 (107-236)||(29811110-29811238)
chr3 (339-402)||(40372794-40372856)
chr3 (345-402)||(1305990-1306046)
chr3 (376-449)||(23410409-23410483)
chr3 (319-387)||(39039995-39040063)
[»] chr2 (64 HSPs)
chr2 (313-458)||(2837972-2838117)
chr2 (313-452)||(2869640-2869780)
chr2 (313-458)||(1345483-1345628)
chr2 (313-449)||(20522230-20522367)
chr2 (345-449)||(21629985-21630090)
chr2 (322-443)||(27149251-27149372)
chr2 (345-449)||(31056086-31056191)
chr2 (108-236)||(33162254-33162380)
chr2 (313-449)||(34682284-34682421)
chr2 (313-444)||(13569338-13569470)
chr2 (108-236)||(39285077-39285202)
chr2 (319-449)||(10445394-10445525)
chr2 (313-446)||(10707205-10707339)
chr2 (310-452)||(15903838-15903979)
chr2 (313-407)||(34388868-34388962)
chr2 (313-449)||(14698958-14699094)
chr2 (313-449)||(17865213-17865350)
chr2 (345-449)||(40014967-40015072)
chr2 (313-449)||(8040070-8040209)
chr2 (319-449)||(33118152-33118283)
chr2 (108-236)||(29868111-29868237)
chr2 (108-236)||(42362588-42362713)
chr2 (107-236)||(2838188-2838314)
chr2 (345-449)||(8390100-8390205)
chr2 (107-236)||(723546-723672)
chr2 (333-452)||(28770722-28770841)
chr2 (107-236)||(34139572-34139698)
chr2 (319-449)||(39482947-39483078)
chr2 (146-236)||(11067543-11067629)
chr2 (347-449)||(33528576-33528674)
chr2 (108-236)||(36773800-36773926)
chr2 (313-448)||(28259129-28259264)
chr2 (107-236)||(36317812-36317939)
chr2 (108-236)||(11151395-11151521)
chr2 (104-236)||(14633624-14633753)
chr2 (347-452)||(18674349-18674454)
chr2 (339-452)||(35397548-35397659)
chr2 (108-234)||(2334218-2334341)
chr2 (376-449)||(11151671-11151745)
chr2 (345-448)||(23078422-23078525)
chr2 (197-236)||(14202310-14202349)
chr2 (313-407)||(16940202-16940296)
chr2 (313-407)||(17010867-17010961)
chr2 (106-236)||(36987873-36988001)
chr2 (376-449)||(11690515-11690589)
chr2 (376-449)||(42362366-42362440)
chr2 (339-402)||(3491786-3491848)
chr2 (107-175)||(11690787-11690857)
chr2 (339-402)||(25398531-25398593)
chr2 (339-402)||(25403669-25403731)
chr2 (339-402)||(25407658-25407720)
chr2 (376-451)||(723824-723900)
chr2 (108-236)||(24885828-24885953)
chr2 (388-449)||(14202497-14202559)
chr2 (376-449)||(14633906-14633980)
chr2 (319-449)||(42039619-42039750)
chr2 (108-240)||(6594804-6594934)
chr2 (339-402)||(11098926-11098988)
chr2 (339-402)||(14291524-14291586)
chr2 (345-402)||(9296400-9296456)
chr2 (383-449)||(24885675-24885742)
chr2 (111-186)||(4561359-4561435)
chr2 (344-452)||(27139843-27139951)
chr2 (376-449)||(34139851-34139925)
[»] chr7 (55 HSPs)
chr7 (313-452)||(28617173-28617312)
chr7 (319-452)||(5817218-5817350)
chr7 (310-450)||(3047261-3047402)
chr7 (313-450)||(29159813-29159951)
chr7 (313-450)||(33332399-33332537)
chr7 (313-449)||(2647646-2647783)
chr7 (313-449)||(46516260-46516397)
chr7 (313-458)||(2580400-2580545)
chr7 (313-449)||(55958-56094)
chr7 (313-452)||(23402961-23403100)
chr7 (313-458)||(20284099-20284244)
chr7 (108-236)||(41317238-41317364)
chr7 (108-236)||(47675936-47676062)
chr7 (146-236)||(36146251-36146338)
chr7 (313-458)||(9189949-9190095)
chr7 (107-236)||(14069632-14069759)
chr7 (107-236)||(14379660-14379787)
chr7 (339-449)||(35960852-35960963)
chr7 (108-236)||(19502421-19502547)
chr7 (347-447)||(49091705-49091806)
chr7 (313-449)||(21983294-21983432)
chr7 (106-236)||(23555283-23555412)
chr7 (107-236)||(18126888-18127016)
chr7 (313-387)||(9185178-9185252)
chr7 (195-236)||(30024641-30024682)
chr7 (146-228)||(24525345-24525424)
chr7 (311-449)||(4796617-4796756)
chr7 (385-449)||(24525985-24526051)
chr7 (107-236)||(47673743-47673870)
chr7 (108-235)||(26417559-26417685)
chr7 (108-236)||(31105200-31105322)
chr7 (108-236)||(31519133-31519258)
chr7 (340-402)||(44848683-44848744)
chr7 (107-177)||(4586459-4586531)
chr7 (195-235)||(8153581-8153621)
chr7 (141-236)||(495822-495913)
chr7 (131-240)||(23564893-23564995)
chr7 (108-236)||(38671025-38671150)
chr7 (345-402)||(18413681-18413737)
chr7 (387-458)||(9235524-9235596)
chr7 (376-449)||(38671302-38671376)
chr7 (376-451)||(41649091-41649166)
chr7 (339-402)||(1533443-1533505)
chr7 (339-402)||(2058001-2058063)
chr7 (348-446)||(2479381-2479479)
chr7 (339-402)||(18408799-18408861)
chr7 (339-402)||(21639844-21639906)
chr7 (313-402)||(21988918-21989006)
chr7 (112-236)||(43864486-43864609)
chr7 (108-236)||(1113895-1114021)
chr7 (146-232)||(29991299-29991382)
chr7 (376-449)||(3259009-3259083)
chr7 (380-449)||(25615867-25615937)
chr7 (108-177)||(31732768-31732839)
chr7 (109-186)||(48489720-48489798)
[»] chr6 (30 HSPs)
chr6 (319-458)||(14521690-14521828)
chr6 (327-450)||(31076891-31077014)
chr6 (313-449)||(10077115-10077252)
chr6 (313-449)||(5572191-5572328)
chr6 (339-449)||(21801294-21801405)
chr6 (313-450)||(31979523-31979661)
chr6 (345-449)||(31086423-31086528)
chr6 (320-449)||(18232862-18232992)
chr6 (310-450)||(24435920-24436061)
chr6 (313-448)||(5757430-5757565)
chr6 (107-236)||(14521477-14521607)
chr6 (347-449)||(4629998-4630101)
chr6 (320-450)||(27165700-27165831)
chr6 (313-402)||(21356046-21356134)
chr6 (345-450)||(22963741-22963846)
chr6 (345-450)||(23824547-23824652)
chr6 (146-232)||(3038766-3038849)
chr6 (345-452)||(1115052-1115159)
chr6 (392-449)||(16569047-16569106)
chr6 (196-236)||(33160236-33160276)
chr6 (391-450)||(99244-99303)
chr6 (363-452)||(30518076-30518165)
chr6 (339-387)||(22709054-22709102)
chr6 (319-387)||(31936603-31936671)
chr6 (146-177)||(5406042-5406073)
chr6 (146-177)||(5410367-5410398)
chr6 (339-402)||(5674769-5674831)
chr6 (382-449)||(28137494-28137562)
chr6 (195-236)||(33211074-33211115)
chr6 (386-451)||(22424917-22424983)
[»] chr1 (62 HSPs)
chr1 (311-450)||(17345469-17345607)
chr1 (313-449)||(19072938-19073075)
chr1 (313-449)||(19120828-19120965)
chr1 (310-452)||(22819435-22819578)
chr1 (356-452)||(9023787-9023883)
chr1 (313-449)||(47703886-47704023)
chr1 (319-449)||(16124466-16124597)
chr1 (108-236)||(13137780-13137906)
chr1 (319-407)||(27104365-27104453)
chr1 (313-449)||(13598408-13598545)
chr1 (313-449)||(29651821-29651958)
chr1 (108-236)||(45644158-45644284)
chr1 (313-449)||(47098775-47098911)
chr1 (107-236)||(28223220-28223347)
chr1 (313-449)||(9476271-9476408)
chr1 (313-448)||(3281718-3281853)
chr1 (313-448)||(26644849-26644984)
chr1 (107-236)||(28220025-28220152)
chr1 (381-452)||(35109485-35109556)
chr1 (108-236)||(196710-196835)
chr1 (108-236)||(1833751-1833876)
chr1 (319-458)||(32889455-32889595)
chr1 (146-236)||(50167019-50167105)
chr1 (109-235)||(30476247-30476371)
chr1 (313-388)||(775682-775757)
chr1 (107-236)||(4552447-4552574)
chr1 (107-232)||(23555070-23555192)
chr1 (342-452)||(918428-918538)
chr1 (342-452)||(11032268-11032378)
chr1 (339-444)||(21536525-21536630)
chr1 (108-234)||(833970-834093)
chr1 (376-449)||(8550867-8550941)
chr1 (376-449)||(45644434-45644509)
chr1 (333-452)||(32736944-32737063)
chr1 (107-232)||(40122000-40122122)
chr1 (196-235)||(46065156-46065195)
chr1 (108-236)||(28265359-28265484)
chr1 (376-451)||(40122278-40122354)
chr1 (107-236)||(41361153-41361279)
chr1 (107-236)||(8550583-8550710)
chr1 (313-405)||(47102837-47102928)
chr1 (339-402)||(24202768-24202830)
chr1 (107-236)||(31659480-31659607)
chr1 (370-448)||(40816765-40816844)
chr1 (357-440)||(48382441-48382524)
chr1 (146-232)||(3846960-3847045)
chr1 (378-452)||(10997031-10997105)
chr1 (107-186)||(37559663-37559744)
chr1 (345-402)||(13604622-13604678)
chr1 (345-402)||(19358842-19358898)
chr1 (345-402)||(19361431-19361487)
chr1 (345-402)||(19380071-19380127)
chr1 (195-236)||(50169099-50169140)
chr1 (108-186)||(927785-927862)
chr1 (202-236)||(3189573-3189607)
chr1 (202-236)||(3198390-3198424)
chr1 (202-236)||(3207229-3207263)
chr1 (363-429)||(8281378-8281444)
chr1 (376-449)||(196988-197062)
chr1 (376-449)||(834247-834321)
chr1 (198-234)||(16455861-16455897)
chr1 (376-429)||(46064951-46065006)
[»] chr5 (45 HSPs)
chr5 (310-449)||(11181782-11181923)
chr5 (319-452)||(33030888-33031021)
chr5 (313-449)||(10281761-10281898)
chr5 (338-452)||(6741887-6742001)
chr5 (108-236)||(28750455-28750581)
chr5 (313-458)||(42127352-42127497)
chr5 (345-442)||(7160861-7160958)
chr5 (347-449)||(3880343-3880446)
chr5 (319-458)||(28832275-28832412)
chr5 (347-448)||(12084127-12084228)
chr5 (319-452)||(2630247-2630380)
chr5 (108-236)||(13488443-13488569)
chr5 (313-402)||(9353331-9353419)
chr5 (313-449)||(11916922-11917059)
chr5 (345-449)||(19588788-19588893)
chr5 (313-402)||(36932349-36932437)
chr5 (110-236)||(538263-538387)
chr5 (313-448)||(17003911-17004047)
chr5 (122-236)||(42428244-42428356)
chr5 (107-236)||(5887234-5887360)
chr5 (107-236)||(42426034-42426161)
chr5 (105-236)||(30682719-30682849)
chr5 (107-236)||(31183216-31183342)
chr5 (146-236)||(13239994-13240080)
chr5 (313-402)||(15464542-15464630)
chr5 (313-448)||(14520240-14520375)
chr5 (110-236)||(32637066-32637190)
chr5 (107-224)||(534013-534128)
chr5 (376-451)||(33831692-33831768)
chr5 (146-236)||(16649674-16649760)
chr5 (195-236)||(37439384-37439425)
chr5 (195-236)||(42927135-42927176)
chr5 (339-402)||(38192209-38192271)
chr5 (339-402)||(38219434-38219496)
chr5 (345-407)||(24553501-24553561)
chr5 (313-402)||(31300595-31300683)
chr5 (376-449)||(5887496-5887570)
chr5 (201-236)||(8565841-8565876)
chr5 (381-449)||(8566031-8566100)
chr5 (339-402)||(24135884-24135946)
chr5 (346-389)||(28537669-28537712)
chr5 (108-240)||(39468348-39468479)
chr5 (107-186)||(3075548-3075629)
chr5 (146-236)||(33831921-33832007)
chr5 (416-452)||(3651613-3651649)
[»] chr4 (50 HSPs)
chr4 (310-449)||(39774255-39774395)
chr4 (310-441)||(1983259-1983390)
chr4 (328-449)||(18377384-18377506)
chr4 (313-449)||(10047389-10047526)
chr4 (313-449)||(16623243-16623380)
chr4 (346-452)||(37781905-37782011)
chr4 (313-448)||(36315181-36315316)
chr4 (313-448)||(36329390-36329525)
chr4 (310-450)||(5112244-5112384)
chr4 (313-448)||(5396623-5396758)
chr4 (108-236)||(26175436-26175562)
chr4 (345-449)||(3796469-3796574)
chr4 (313-449)||(38152389-38152526)
chr4 (107-236)||(5872060-5872184)
chr4 (339-407)||(16630673-16630741)
chr4 (346-449)||(42599523-42599626)
chr4 (338-401)||(34495822-34495885)
chr4 (107-236)||(46147194-46147321)
chr4 (313-407)||(3777559-3777652)
chr4 (108-232)||(36463196-36463317)
chr4 (313-403)||(39246004-39246094)
chr4 (107-228)||(45686986-45687105)
chr4 (345-449)||(6743366-6743470)
chr4 (107-236)||(12743727-12743851)
chr4 (319-449)||(24333825-24333957)
chr4 (195-236)||(36994761-36994802)
chr4 (392-452)||(34670613-34670673)
chr4 (108-233)||(48893443-48893565)
chr4 (107-177)||(5350199-5350269)
chr4 (107-233)||(12739352-12739473)
chr4 (108-241)||(31474384-31474512)
chr4 (313-402)||(31985633-31985720)
chr4 (105-236)||(47038213-47038341)
chr4 (313-449)||(54867194-54867330)
chr4 (339-387)||(28468542-28468590)
chr4 (381-449)||(45687267-45687337)
chr4 (107-212)||(4588218-4588321)
chr4 (376-451)||(5871832-5871908)
chr4 (313-449)||(5147687-5147824)
chr4 (195-236)||(29254736-29254777)
chr4 (347-451)||(873467-873571)
chr4 (319-387)||(5269204-5269272)
chr4 (107-236)||(9927257-9927385)
chr4 (110-174)||(53345480-53345544)
chr4 (147-241)||(6542027-6542114)
chr4 (339-402)||(24741976-24742038)
chr4 (339-402)||(29760677-29760739)
chr4 (107-186)||(52082462-52082542)
chr4 (356-452)||(18912311-18912407)
chr4 (338-406)||(39593764-39593831)
[»] scaffold0148 (1 HSPs)
scaffold0148 (313-406)||(10739-10832)
[»] scaffold0006 (3 HSPs)
scaffold0006 (313-449)||(5693-5830)
scaffold0006 (313-449)||(2502-2639)
scaffold0006 (345-402)||(133279-133335)
[»] scaffold0036 (1 HSPs)
scaffold0036 (313-449)||(85693-85829)
[»] scaffold0140 (1 HSPs)
scaffold0140 (313-402)||(8418-8506)
[»] scaffold0087 (2 HSPs)
scaffold0087 (313-448)||(43913-44048)
scaffold0087 (313-448)||(36784-36919)
[»] scaffold0176 (1 HSPs)
scaffold0176 (347-449)||(17307-17410)
[»] scaffold0016 (1 HSPs)
scaffold0016 (341-452)||(102442-102553)
[»] scaffold0188 (2 HSPs)
scaffold0188 (339-402)||(17951-18013)
scaffold0188 (339-402)||(24044-24106)
[»] scaffold0076 (1 HSPs)
scaffold0076 (313-451)||(15937-16075)
[»] scaffold0184 (1 HSPs)
scaffold0184 (327-387)||(29506-29566)
[»] scaffold0078 (1 HSPs)
scaffold0078 (327-387)||(43278-43338)
[»] scaffold0236 (1 HSPs)
scaffold0236 (392-438)||(10515-10561)
[»] scaffold0219 (1 HSPs)
scaffold0219 (107-143)||(27249-27285)
[»] scaffold0098 (1 HSPs)
scaffold0098 (339-379)||(45289-45329)


Alignment Details
Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 17 - 241
Target Start/End: Original strand, 3050834 - 3051058
Alignment:
Q  17 acaattaatactaatttgagacagttatggtggaaccatgggaggcattatctcttctcacttttaagaaagccttagaaccattaacagttgttgtgaa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3050834 acaattaatactaatttgagacagttatggtggaaccatgggaggcattatctcttctcacttttaagaaagccttagaaccattaacagttgttgtgaa 3050933  T
Q  117 ttgggactcaaatctcacaccaataaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataac 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3050934 ttgggactcaaatctcacaccaataaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataac 3051033  T
Q  217 aacacctagatctaatctagaaatt 241  Q
    |||||||||||||||||||||||||    
T  3051034 aacacctagatctaatctagaaatt 3051058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 307 - 459
Target Start/End: Original strand, 3051124 - 3051276
Alignment:
Q  307 ttagtaacccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattag 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3051124 ttagtaacccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattag 3051223  T
Q  407 cataagagctcacaaagaacaaaacttaatttctacccatttttcatctcact 459  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3051224 cataagagctcacaaagaacaaaacttaatttctacccatttttcatgtcact 3051276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 327 - 452
Target Start/End: Complemental strand, 9054910 - 9054785
Alignment:
Q  327 aatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaac 426  Q
    ||||| |||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||   |||||||||||||||| ||| ||| ||||||||||    
T  9054910 aatatgacctactctggaggagagagcagctctctaatccactaagatgaaagtgatacaaagtggttacaagaaattagcttaaaagcgcacaaagaac 9054811  T
Q  427 aaaacttaatttctacccatttttca 452  Q
    ||||  ||||||||||||||||||||    
T  9054810 aaaatctaatttctacccatttttca 9054785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 311 - 452
Target Start/End: Original strand, 6813691 - 6813833
Alignment:
Q  311 taacccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcata 410  Q
    ||||||| ||||||| |||||||||| | || | |||||||||| |||||||||||| |||||||||||||| ||||| | |||||||||||||||| |     
T  6813691 taacccagttcggtccaatataacctacactaggggagagagcagctctccaatccaataagatgaaagtgacacaaaggggttacaagaaattagcttg 6813790  T
Q  411 agagctcacaaagaacaaaacttaa-tttctacccatttttca 452  Q
      ||||||||||||||||||| ||| |||||||||||||||||    
T  6813791 caagctcacaaagaacaaaacctaattttctacccatttttca 6813833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 313 - 449
Target Start/End: Complemental strand, 23799664 - 23799527
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  | |||||||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  23799664 acccagttcggtccaatatgacctaatttggaggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttaca 23799565  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  23799564 agcttacacaagaacaagacctaatttctacccatttt 23799527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 21 - 109
Target Start/End: Original strand, 3063232 - 3063320
Alignment:
Q  21 ttaatactaatttgagacagttatggtggaaccatgggaggcattatctcttctcacttttaagaaagccttagaaccattaacagttg 109  Q
    |||||||||||||| ||||| || ||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||| |||||    
T  3063232 ttaatactaatttgtgacaggtacggtggaaccatgggaggcattatcttttctcactttcaagaaagccttagcaccattaagagttg 3063320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 347 - 449
Target Start/End: Original strand, 6127265 - 6127368
Alignment:
Q  347 agagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac-aaagaacaaaacttaatttctaccca 445  Q
    |||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||| ||  |||| || ||||||||| || |||||||||||||    
T  6127265 agagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacaaaagaacaagacctaatttctaccca 6127364  T
Q  446 tttt 449  Q
    ||||    
T  6127365 tttt 6127368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 361 - 452
Target Start/End: Complemental strand, 7493212 - 7493121
Alignment:
Q  361 caatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccatttttca 452  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||| ||||| |||||||| |||||||||| |||||||||||  |||||||    
T  7493212 caatccactaagatgaaagtgatacaaagaagttataagaaattaacataaaagctcacacagaacaaaacctaatttctacctgtttttca 7493121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 112 - 236
Target Start/End: Original strand, 3303474 - 3303596
Alignment:
Q  112 gtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaa 209  Q
    ||||||| |||||||||||||||||||||  |||  ||||||||||||| |||| ||||| |||||||  ||||    || ||| |||||||||||||||    
T  3303474 gtgaattcggactcaaatctcacaccaatacaaactatgatgtgtggagcaaaggaaagtggtaaccaatatca----aaacaaacacaagcaacaacaa 3303569  T
Q  210 taataacaacacctagatctaatctag 236  Q
    ||||||| |||||||||||||||||||    
T  3303570 taataactacacctagatctaatctag 3303596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 313 - 449
Target Start/End: Complemental strand, 5702570 - 5702433
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  | ||| |||||||||| | ||||||||| ||| |||||||||| |||||| |||||||||||||||||| ||      
T  5702570 acccagttcggtccaatatgacctaatatgggggagagagcatccctccaatcccctatgatgaaagtgttacaaaagagttacaagaaattagcttata 5702471  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    |||| ||| |||| |||||| |||||||||||||||||    
T  5702470 agcttacacaagagcaaaacctaatttctacccatttt 5702433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 313 - 449
Target Start/End: Complemental strand, 26403317 - 26403180
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| |||||| | ||||||||| ||      
T  26403317 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttataggaaattagcttaca 26403218  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    ||||  || |||||||| || |||||||||||||||||    
T  26403217 agcttgcacaagaacaagacctaatttctacccatttt 26403180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 107 - 236
Target Start/End: Complemental strand, 43036792 - 43036665
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaata--aataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    ||||| |||||| ||||||||| ||||||||||||  || |||||||||||||| |||| |||||||||||||   |||    ||| || ||||||||||    
T  43036792 ttgttatgaatttggactcaaaactcacaccaatacaaaaaatgatgtgtggagcaaaggaaagtagtaaccaatttca----aagtaaacacaagcaac 43036697  T
Q  205 aacaataataacaacacctagatctaatctag 236  Q
    |||||||| |||| ||||||||||||||||||    
T  43036696 aacaataacaacaccacctagatctaatctag 43036665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 376 - 449
Target Start/End: Complemental strand, 30291695 - 30291620
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataag--agctcacaaagaacaaaacttaatttctacccatttt 449  Q
    |||||||||||||||||||||||||||||||| | |   ||||||||||||||||||| |||||||||||||||||    
T  30291695 aaagtgatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaacctaatttctacccatttt 30291620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 103 - 239
Target Start/End: Original strand, 12702426 - 12702562
Alignment:
Q  103 acagttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaag 200  Q
    |||||||||||||||| |||||||||  ||||| ||||| | |  ||||||||||||| |||| |||||||||||||  ||||    ||| || ||||||    
T  12702426 acagttgttgtgaattcggactcaaaa-tcacatcaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatca----aagtaaacacaag 12702520  T
Q  201 caacaacaataataaca---acacctagatctaatctagaaa 239  Q
    |||||||||||||||||   ||||||||||||||||||||||    
T  12702521 caacaacaataataacaacgacacctagatctaatctagaaa 12702562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 448
Target Start/End: Original strand, 28307568 - 28307707
Alignment:
Q  310 gtaacccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattag-ca 408  Q
    |||||||| ||||||| || || |||| |||||| |  ||||||| |||||||||||||||||||| |||| ||||| ||| |||||||||||||||       
T  28307568 gtaacccagttcggtccaaaatgacctactctggggatgagagcagctctccaatccactaagatggaagtaatacacatgggttacaagaaattagttt 28307667  T
Q  409 taagagctcacaaagaacaaaacttaatttctacccattt 448  Q
    ||| |||||| ||||||||| || || ||||||| |||||    
T  28307668 taaaagctcataaagaacaagacctactttctacacattt 28307707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 3037267 - 3037347
Alignment:
Q  28 taatttgagacagttatggtggaaccatgggaggcattatctcttctcacttttaagaaagccttagaaccattaacagttg 109  Q
    ||||||||||| |||||||||||||||||| ||| ||||||| |||||| ||| ||||||||||||| |||||||| |||||    
T  3037267 taatttgagacggttatggtggaaccatgg-aggtattatcttttctcattttcaagaaagccttagcaccattaagagttg 3037347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 108 - 232
Target Start/End: Complemental strand, 5689635 - 5689513
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    |||||||||||  ||||||||  ||||||||||| | |  ||||||||||||| |||| |||||||||||||  |||||||||| |||   |||||||||    
T  5689635 tgttgtgaattccgactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagcaaacaa---caagcaaca 5689540  T
Q  206 acaataataacaacacctagatctaat 232  Q
    ||||||||||||||| ||| |||||||    
T  5689539 acaataataacaacatctaaatctaat 5689513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 319 - 458
Target Start/End: Complemental strand, 19752475 - 19752335
Alignment:
Q  319 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaag-aaattagcataagagctc 417  Q
    ||||||| ||||| ||||  ||| | |||||||||| |||||||||||||||||||||||||| ||| ||||||||||||| ||| |||| |   ||||     
T  19752475 ttcggtccaatatgacctagtctaggggagagagcagctctccaatccactaagatgaaagtgttac-aatgagttacaagaaaaatagcttgcaagctt 19752377  T
Q  418 aca-aagaacaaaacttaatttctacccatttttcatctcac 458  Q
    ||| ||||||||  | ||||||||||||||||||||| ||||    
T  19752376 acacaagaacaagtcctaatttctacccatttttcatatcac 19752335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 448
Target Start/End: Original strand, 7412351 - 7412486
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  | ||| |||||||||| ||||||||||||||| |||||||||| |||||| ||||||||||||| || | |       
T  7412351 acccagttcggtccaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaataacttgca 7412449  T
Q  413 agctcaca-aagaacaaaacttaatttctacccattt 448  Q
    |||| ||| |||||||| || ||||||||||||||||    
T  7412450 agcttacacaagaacaagacctaatttctacccattt 7412486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 345 - 452
Target Start/End: Complemental strand, 5990615 - 5990509
Alignment:
Q  345 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctaccc 444  Q
    |||||||||  |||||||||  ||||||||||||||||||||||   |||||||||||||||| ||| |||||||||||||||  || | ||||  ||||    
T  5990615 ggagagagcggctctccaatt-actaagatgaaagtgatacaaagatgttacaagaaattagcttaaaagctcacaaagaacacgacctcattttcaccc 5990517  T
Q  445 atttttca 452  Q
    ||||||||    
T  5990516 atttttca 5990509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 319 - 402
Target Start/End: Complemental strand, 19175835 - 19175753
Alignment:
Q  319 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||    
T  19175835 ttcggtccaatatgacctaatctgggggagagagcaactctccaatccactatgatgaaagtgttacaaa-gagttacaagaaa 19175753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 448
Target Start/End: Original strand, 4456064 - 4456173
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatt 437  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||| ||||||||||||| ||||     |||| ||| |||||||| || |||||    
T  4456064 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaatagctggcaagcttacacaagaacaagacataatt 4456162  T
Q  438 tctacccattt 448  Q
    |||||||||||    
T  4456163 tctacccattt 4456173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 40321359 - 40321318
Alignment:
Q  195 cacaagcaacaacaataataacaacacctagatctaatctag 236  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  40321359 cacaagcaacaacaataataacaacacctagatctaatctag 40321318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 1292543 - 1292617
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataag--agctcacaaagaacaaaacttaatttctacccatttt 449  Q
    |||| ||||||||||||||||||||||||||| | |   ||||||||||||||||| |||||||||||||||||||    
T  1292543 aaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaa-cttaatttctacccatttt 1292617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 3303750 - 3303824
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    |||| ||||||||||||||||||||||||||  |||   |||||||||||||| ||||||||||||||||||||||    
T  3303750 aaagagatacaaatgagttacaagaaattaggttaaacaagctcacaaagaac-aaacttaatttctacccatttt 3303824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 110 - 232
Target Start/End: Original strand, 41366420 - 41366539
Alignment:
Q  110 ttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaac 207  Q
    ||||||||| |||||||||  ||||||||||| | |  ||||||||||||| |||| |||||||||||||  ||||    ||| || ||||||||| |||    
T  41366420 ttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatca----aagtaaacacaagcaataac 41366514  T
Q  208 aataataacaacacctagatctaat 232  Q
    || ||||||||||||||||||||||    
T  41366515 aacaataacaacacctagatctaat 41366539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 402
Target Start/End: Complemental strand, 31071310 - 31071228
Alignment:
Q  319 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  31071310 ttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 31071228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 15213155 - 15213075
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaag 186  Q
    ||||||||||| ||||||||| |||||||||||  |||  ||||||||||||| |||| |||||||||||||  |||||||    
T  15213155 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaag 15213075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 19491502 - 19491628
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaat-aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    |||||||||||| ||||||||| |||  |||||| |||  ||||||||||||| |||| |||||| ||| ||  ||||    ||| || |||||| ||||    
T  19491502 ttgttgtgaattcggactcaaaactctaaccaataaaactatgatgtgtggagcaaaggaaagtattaatcaatatca----aagtaaacacaagtaaca 19491597  T
Q  206 acaataataacaacacctagatctaatctag 236  Q
    |||| |||||||||||||| |||||||||||    
T  19491598 acaacaataacaacacctatatctaatctag 19491628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 240
Target Start/End: Complemental strand, 44304201 - 44304093
Alignment:
Q  131 tcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaa-caataataacaacacctagat 227  Q
    ||||||||||| |||  ||||||||||||| |||| |||||||||||||  || ||||  ||||    ||||||| || ||| |||||||||||||||||    
T  44304201 tcacaccaatacatactatgatgtgtggagcaaaggaaagtagtaaccaatattaaagtgagca----caagcaataatcaacaataacaacacctagat 44304106  T
Q  228 ctaatctagaaat 240  Q
    |||||||||||||    
T  44304105 ctaatctagaaat 44304093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 402
Target Start/End: Complemental strand, 1262015 - 1261953
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  1262015 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 1261953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 152 - 236
Target Start/End: Original strand, 1345221 - 1345301
Alignment:
Q  152 tgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatctaatctag 236  Q
    ||||||| |||| |||||||||||||  ||||    ||| || ||||| ||||||||||||||| ||||||||||||||||||||    
T  1345221 tgtggagcaaaggaaagtagtaaccaatatca----aagtaaacacaaacaacaacaataataataacacctagatctaatctag 1345301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 452
Target Start/End: Complemental strand, 8863646 - 8863574
Alignment:
Q  378 agtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccatttttca 452  Q
    |||||||||||   |||||||||||||| | ||| ||||||||  ||||||| ||||||||||||||||||||||    
T  8863646 agtgatacaaagaggttacaagaaattaacttaaaagctcaca--gaacaaaccttaatttctacccatttttca 8863574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 449
Target Start/End: Complemental strand, 6599054 - 6598986
Alignment:
Q  382 atacaaatgagttacaagaaattagcataag--agctcacaaagaacaaaacttaatttctacccatttt 449  Q
    ||||||||| |||||||||||||||| |||   ||||| ||||||||||| |||||||||||||||||||    
T  6599054 atacaaatgggttacaagaaattagcttaaacaagctcgcaaagaacaaa-cttaatttctacccatttt 6598986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Complemental strand, 6599245 - 6599211
Alignment:
Q  202 aacaacaataataacaacacctagatctaatctag 236  Q
    |||||||||||||||||||||||||||||||||||    
T  6599245 aacaacaataataacaacacctagatctaatctag 6599211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 449
Target Start/End: Complemental strand, 6674507 - 6674439
Alignment:
Q  382 atacaaatgagttacaagaaattagcataag--agctcacaaagaacaaaacttaatttctacccatttt 449  Q
    ||||||||| |||||||||||||||| |||   ||||| ||||||||||| |||||||||||||||||||    
T  6674507 atacaaatgggttacaagaaattagcttaaacaagctcgcaaagaacaaa-cttaatttctacccatttt 6674439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Complemental strand, 6674698 - 6674664
Alignment:
Q  202 aacaacaataataacaacacctagatctaatctag 236  Q
    |||||||||||||||||||||||||||||||||||    
T  6674698 aacaacaataataacaacacctagatctaatctag 6674664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 146 - 236
Target Start/End: Complemental strand, 8154109 - 8154024
Alignment:
Q  146 atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatctaatctag 236  Q
    |||||||||| ||||||| |||||||||| ||  ||||||| || ||    |||||||||||||||||||||| |||||||| ||||||||    
T  8154109 atgatgtgtgaagtaaaggaaagtagtaatcaatatcaaagtaacca----caagcaacaacaataataacaa-acctagatgtaatctag 8154024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 18142097 - 18142056
Alignment:
Q  195 cacaagcaacaacaataataacaacacctagatctaatctag 236  Q
    |||||||||||| ||||||||||||||||| |||||||||||    
T  18142097 cacaagcaacaataataataacaacacctacatctaatctag 18142056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 4743027 - 4743098
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaacca 177  Q
    ||||||||||| |||||||||||||||||||||  |||  || |||||||||| |||| ||||| |||||||    
T  4743027 tgttgtgaattcggactcaaatctcacaccaatacaaactataatgtgtggagcaaaggaaagtggtaacca 4743098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 387
Target Start/End: Original strand, 26287937 - 26287985
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaa 387  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  26287937 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 26287985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 387
Target Start/End: Original strand, 26301194 - 26301242
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaa 387  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  26301194 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 26301242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 387
Target Start/End: Original strand, 26313188 - 26313236
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaa 387  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  26313188 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 26313236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 3231645 - 3231700
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaataaataatgatgtgtggagtaaa 162  Q
    |||||||||||| |||||| |||||||||||||||||    |||||||||||||||    
T  3231645 ttgttgtgaattcggactctaatctcacaccaataaacttggatgtgtggagtaaa 3231700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 402
Target Start/End: Complemental strand, 18853229 - 18853166
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| |||||||||||| ||  ||||||||| |||||| | |||||||||||    
T  18853229 tctgggggagagagcagctctccaatccaatataatgaaagtgttacaaaagggttacaagaaa 18853166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 402
Target Start/End: Complemental strand, 18870623 - 18870560
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| |||||||||||| ||  ||||||||| |||||| | |||||||||||    
T  18870623 tctgggggagagagcagctctccaatccaatataatgaaagtgttacaaaagggttacaagaaa 18870560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 402
Target Start/End: Original strand, 36979413 - 36979475
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  36979413 tctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 36979475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 429
Target Start/End: Complemental strand, 3772274 - 3772225
Alignment:
Q  382 atacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaa 429  Q
    |||||||||||||||||||||||||| |||   |||||||||||||||||    
T  3772274 atacaaatgagttacaagaaattagcttaaataagctcacaaagaacaaa 3772225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 449
Target Start/End: Complemental strand, 40328857 - 40328793
Alignment:
Q  386 aaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    |||||||||||||||||||||  |||   |||||||||||||| |||| |||||||||||||||||    
T  40328857 aaatgagttacaagaaattagtttaaacaagctcacaaagaac-aaacctaatttctacccatttt 40328793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 402
Target Start/End: Complemental strand, 4760130 - 4760074
Alignment:
Q  345 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  4760130 ggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 4760074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 9765906 - 9765849
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccacta 370  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| |||||||||||||||    
T  9765906 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccacta 9765849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 10015358 - 10015321
Alignment:
Q  195 cacaagcaacaacaataataacaacacctagatctaat 232  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  10015358 cacaagcaaaaacaataataacaatacctagatctaat 10015321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 18105960 - 18106001
Alignment:
Q  195 cacaagcaacaacaataataacaacacctagatctaatctag 236  Q
    ||||||||| ||||| ||||||| ||||||||||||||||||    
T  18105960 cacaagcaataacaacaataacatcacctagatctaatctag 18106001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 4732027 - 4731957
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaata--aataatgatgtgtggagtaaagaaaagtagtaacc 176  Q
    |||||||||||| | |||||||  |||||||||||  || |||||||||||||| |||| ||||||||||||    
T  4732027 ttgttgtgaattcgaactcaaaa-tcacaccaatacaaacaatgatgtgtggagcaaaggaaagtagtaacc 4731957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 41364927 - 41365001
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    |||| |||||||||| |||||||||||||||| |||   | |||||||||||| |||| ||||||||||| |||||    
T  41364927 aaagggatacaaatgtgttacaagaaattagcttaaacaaactcacaaagaac-aaacctaatttctaccaatttt 41365001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 452
Target Start/End: Complemental strand, 42093188 - 42093128
Alignment:
Q  392 gttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccatttttca 452  Q
    |||||||||||||||| ||  | ||||||||||||| | | ||||||||||| ||||||||    
T  42093188 gttacaagaaattagcttacaaactcacaaagaacatatcataatttctacctatttttca 42093128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 1e-48; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 339 - 453
Target Start/End: Original strand, 21353598 - 21353712
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaattt 438  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||    
T  21353598 tctgaaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcacaagagctcacaaagaacacaacctaattt 21353697  T
Q  439 ctacccatttttcat 453  Q
    |||||||||||||||    
T  21353698 ctacccatttttcat 21353712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 333 - 452
Target Start/End: Complemental strand, 4386984 - 4386865
Alignment:
Q  333 acctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaact 432  Q
    |||| |||||| |||||||||| |||||||||||| |||||| ||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||     
T  4386984 acctactctgggggagagagcagctctccaatccaataagataaaagtgatacaaatgggttacaagaaattagcttaaaagctcacaaagaacaaaacc 4386885  T
Q  433 taatttctacccatttttca 452  Q
    |||||||||| |||||||||    
T  4386884 taatttctactcatttttca 4386865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 107 - 234
Target Start/End: Original strand, 29196188 - 29196314
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    |||||||||||| |||||||||||||||||||||| | |  ||||||||||||| |||| |||||||||||||  |||||||||| |||   ||||||||    
T  29196188 ttgttgtgaattcggactcaaatctcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagcaaacaa---caagcaac 29196284  T
Q  205 aacaataataacaacacctagatctaatct 234  Q
    ||||||||||||||||||||||||||||||    
T  29196285 aacaataataacaacacctagatctaatct 29196314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 448
Target Start/End: Complemental strand, 8370563 - 8370428
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||| |||     
T  8370563 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaattagcttaaa 8370465  T
Q  413 agctcaca-aagaacaaaacttaatttctacccattt 448  Q
    |||| ||| |||||||| || ||||||||||||||||    
T  8370464 agcttacacaagaacaagacataatttctacccattt 8370428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 319 - 449
Target Start/End: Original strand, 48438230 - 48438361
Alignment:
Q  319 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctca 418  Q
    ||||||| ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||||||||  |||| |    
T  48438230 ttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcatataagctta 48438329  T
Q  419 ca-aagaacaaaacttaatttctacccatttt 449  Q
    || |||||||| || |||||||||||||||||    
T  48438330 cacaagaacaagacctaatttctacccatttt 48438361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 313 - 449
Target Start/End: Complemental strand, 18552960 - 18552823
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  18552960 acccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttata 18552861  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  18552860 agcttacacaagaacaagacctaatttctacccatttt 18552823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 319 - 449
Target Start/End: Original strand, 25795797 - 25795928
Alignment:
Q  319 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctca 418  Q
    ||||||| ||||| ||||  ||||| |||||||||| |||||||||| ||||||||||||||| ||| || |||||||||||||||||| ||  |||| |    
T  25795797 ttcggtccaatatgacctaatctgggggagagagcagctctccaatctactaagatgaaagtgttacgaaagagttacaagaaattagcttataagctta 25795896  T
Q  419 c-aaagaacaaaacttaatttctacccatttt 449  Q
    | ||||||||| || |||||||||||||||||    
T  25795897 caaaagaacaagacctaatttctacccatttt 25795928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 313 - 449
Target Start/End: Complemental strand, 1736382 - 1736245
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||| | ||      
T  1736382 acccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattaacttata 1736283  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  1736282 agcttacacaagaacaagacctaatttctacccatttt 1736245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 313 - 448
Target Start/End: Original strand, 21711233 - 21711368
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||| ||||||||| |||||||||| |||||| |||||||||||||||||| |||     
T  21711233 acccagttcggtccaatatgacctaatctgggggagagagcagctctcaaatccactatgatgaaagtgttacaaa-gagttacaagaaattagcttaaa 21711331  T
Q  413 agctcaca-aagaacaaaacttaatttctacccattt 448  Q
    |||| ||| |||| ||| || ||||||||||||||||    
T  21711332 agcttacacaagagcaagacctaatttctacccattt 21711368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 313 - 449
Target Start/End: Complemental strand, 3716079 - 3715942
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||| |  ||||||||| |||||||||| |||| |||||||||| |||||| |||||||||||||||||| ||      
T  3716079 acccagttcggtccaatatgacctaatctaggagagagagcagctctccaatctactatgatgaaagtgttacaaaagagttacaagaaattagcttaca 3715980  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    | || ||| |||||||| ||||||||||||||||||||    
T  3715979 aacttacacaagaacaagacttaatttctacccatttt 3715942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 358 - 450
Target Start/End: Original strand, 8126685 - 8126778
Alignment:
Q  358 ctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac-aaagaacaaaacttaatttctacccattttt 450  Q
    ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||  |||| || ||||||||| |||||||||||||||||||||    
T  8126685 ctccaatccactacgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacaaaagaacaatacttaatttctacccattttt 8126778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 108 - 236
Target Start/End: Original strand, 9666270 - 9666396
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    ||||||||||| |||||||||  ||||||||||| | |  ||||| ||||||| |||| |||||||||||||  ||||||||||   || |||||||||     
T  9666270 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatctgtggagcaaaggaaagtagtaaccaatatcaaagcaa---ataacaagcaact 9666365  T
Q  206 acaataataacaacacctagatctaatctag 236  Q
    |||||||||||||||||||||||||||||||    
T  9666366 acaataataacaacacctagatctaatctag 9666396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 313 - 449
Target Start/End: Original strand, 36029103 - 36029240
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||| ||| ||||| ||||  ||||| ||||| |||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  36029103 acccagttctgtccaatatgacctaatctgggggagaaagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttaca 36029202  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    | || ||| |||||||| || |||||||||||||||||    
T  36029203 aacttacacaagaacaagacctaatttctacccatttt 36029240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 313 - 449
Target Start/End: Complemental strand, 40592859 - 40592722
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||  |||||||| | |||||||||| |||| |||||||||| |||||| |||||||||||||||||| ||      
T  40592859 acccagttcggtccaatatgacctaatctgtgggagagagaagctctccaatcgactatgatgaaagtgttacaaaagagttacaagaaattagcttaca 40592760  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    |||| ||| ||||||||||  |||||||||||||||||    
T  40592759 agcttacacaagaacaaaatctaatttctacccatttt 40592722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 343 - 458
Target Start/End: Complemental strand, 3328403 - 3328288
Alignment:
Q  343 gaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac-aaagaacaaaacttaatttcta 441  Q
    |||||||||||| | || ||||||||||||||||||||| ||| ||||||||||||||||||||| ||  |||| || |||||||||  | |||||||||    
T  3328403 gaggagagagcagcccttcaatccactaagatgaaagtgttac-aatgagttacaagaaattagcttataagcttacaaaagaacaagtcctaatttcta 3328305  T
Q  442 cccatttttcatctcac 458  Q
    |||||||||||| ||||    
T  3328304 cccatttttcatatcac 3328288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 319 - 449
Target Start/End: Original strand, 40844668 - 40844798
Alignment:
Q  319 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctca 418  Q
    ||||||| ||||| ||||  ||||| |||||||||| | ||| ||||||||| |||||||||| |||||| |||||||||||||||||| ||  |||| |    
T  40844668 ttcggtccaatatgacctaatctgg-ggagagagcagccctcaaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagctta 40844766  T
Q  419 ca-aagaacaaaacttaatttctacccatttt 449  Q
    || |||||||| || |||||||||||||||||    
T  40844767 cacaagaacaagacctaatttctacccatttt 40844798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 313 - 458
Target Start/End: Complemental strand, 1417567 - 1417422
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | |||||||||||||||| ||||||| ||| ||||||||| ||||||||||| ||      
T  1417567 acccagttcggtccaatatgacctaatctgggggagagagcatccctccaatccactaagaagaaagtgttac-aatgagttataagaaattagcttata 1417469  T
Q  413 agctcac-aaagaacaaaacttaatttctacccatttttcatctcac 458  Q
    | || || |||||||||  | ||||||||||||||||||||| ||||    
T  1417468 aacttacaaaagaacaagtcctaatttctacccatttttcatatcac 1417422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 313 - 446
Target Start/End: Complemental strand, 30709867 - 30709733
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | ||||||||||||| ||||||| || |||||| |||||||||||||||||| ||      
T  30709867 acccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaattgttacaaaagagttacaagaaattagcttata 30709768  T
Q  413 agctcaca-aagaacaaaacttaatttctacccat 446  Q
    |||| ||| |||| ||| || ||||||||||||||    
T  30709767 agcttacacaagagcaagacctaatttctacccat 30709733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 319 - 460
Target Start/End: Original strand, 37466307 - 37466448
Alignment:
Q  319 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctca 418  Q
    ||||||| ||||| ||||  ||||| |||||||| | | |||||||||||||||||||||||| ||| |||||||||||||||||||   ||  |||| |    
T  37466307 ttcggtccaatatgacctaatctgggggagagagtagccctccaatccactaagatgaaagtgttac-aatgagttacaagaaattaatttataagctta 37466405  T
Q  419 c-aaagaacaaaacttaatttctacccatttttcatctcactc 460  Q
    | |||||||||  | ||||||||||||||||||||| ||||||    
T  37466406 caaaagaacaagtcctaatttctacccatttttcatatcactc 37466448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 310 - 398
Target Start/End: Complemental strand, 25929522 - 25929435
Alignment:
Q  310 gtaacccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaa 398  Q
    |||||||| ||||||| ||||  |||| |||||| || ||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  25929522 gtaacccagttcggtccaatacgacctactctggggg-gagagcagccctccaatccactaagatgaaagtgatacaaatgagttacaa 25929435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 376 - 449
Target Start/End: Complemental strand, 32891192 - 32891117
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataag--agctcacaaagaacaaaacttaatttctacccatttt 449  Q
    |||| ||||||||||||||||||||||||||| | |   |||||||||||||||||||||||||||||||||||||    
T  32891192 aaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaacttaatttctacccatttt 32891117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 44700283 - 44700409
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    ||||| |||||| |||||||||  ||||||||||| | |  ||||||  ||||| ||||||||||||||||||  ||||    ||| || ||||||||||    
T  44700283 ttgttttgaattcggactcaaaa-tcacaccaatacaaactatgatgcatggagcaaagaaaagtagtaaccaatatca----aagtaaacacaagcaac 44700377  T
Q  205 aacaataataacaacacctagatctaatctag 236  Q
    ||||||||||||||||||||||||||||||||    
T  44700378 aacaataataacaacacctagatctaatctag 44700409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 108 - 236
Target Start/End: Original strand, 27305519 - 27305641
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaataaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaac 207  Q
    ||||||||||| |||||||||  |||||||||||||  ||||||||||||| |||| |||||||||||||  ||||||| || ||   ||||||||||||    
T  27305519 tgttgtgaattcggactcaaaa-tcacaccaataaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaa-ca---acaagcaacaac 27305613  T
Q  208 aataataacaacacctagatctaatctag 236  Q
    || |||||| | |||||||||||||||||    
T  27305614 aacaataacca-acctagatctaatctag 27305641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 358 - 458
Target Start/End: Complemental strand, 3323722 - 3323622
Alignment:
Q  358 ctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac-aaagaacaaaacttaatttctacccatttttcatctc 456  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||| ||  |||| || |||||||||  | ||||||||||||||| ||||| ||    
T  3323722 ctccaatccactaagatgaaagtgttac-aatgagttacaagaaattagcttataagcttacaaaagaacaagtcataatttctacccattgttcatatc 3323624  T
Q  457 ac 458  Q
    ||    
T  3323623 ac 3323622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 313 - 402
Target Start/End: Complemental strand, 27975029 - 27974941
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||    
T  27975029 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaa 27974941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 407
Target Start/End: Original strand, 16264366 - 16264453
Alignment:
Q  319 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagc 407  Q
    ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| ||||||||||||| ||||    
T  16264366 ttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaatagc 16264453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 23391711 - 23391838
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    |||||||||||| | || |||| |||||||||||| | |  ||||||||||||| |||| |||||| ||||||  |||||||  | ||    |||| |||    
T  23391711 ttgttgtgaattcgaacacaaaactcacaccaatacaaactatgatgtgtggagaaaaggaaagtaataaccaatatcaaagtgaaca----caagaaac 23391806  T
Q  205 aacaataataacaacacctagatctaatctag 236  Q
    ||||||||||||||||||||||||||||||||    
T  23391807 aacaataataacaacacctagatctaatctag 23391838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 339 - 449
Target Start/End: Original strand, 26299024 - 26299135
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatt 437  Q
    ||||| |||||||||| | |||||||| |||| |||||||||| |||||| |||||||||||||||||| ||  | || | | |||||||| || |||||    
T  26299024 tctgggggagagagcagccctccaatctactatgatgaaagtgttacaaaagagttacaagaaattagcttataaacttagacaagaacaagacctaatt 26299123  T
Q  438 tctacccatttt 449  Q
    ||||||||||||    
T  26299124 tctacccatttt 26299135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 345 - 449
Target Start/End: Complemental strand, 47923951 - 47923845
Alignment:
Q  345 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagct--cacaaagaacaaaacttaatttctac 442  Q
    |||||||||| | || ||||| |||| |||||||||| |||||| |||||||||||||||||| ||| || |  |||||||| |||||| |||||| |||    
T  47923951 ggagagagcagcccttcaatctactatgatgaaagtgctacaaaagagttacaagaaattagcttaaaagtttacacaaagagcaaaacctaatttatac 47923852  T
Q  443 ccatttt 449  Q
    |||||||    
T  47923851 ccatttt 47923845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 108 - 236
Target Start/End: Original strand, 21350811 - 21350933
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaat-aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaa 206  Q
    ||||||||||| ||||||||| ||||||||||| |||||| |||||||| || |||| |||||||||||||  ||||||| || ||  ||     |||||    
T  21350811 tgttgtgaattcggactcaaaactcacaccaatgaaataaagatgtgtgaagcaaaggaaagtagtaaccaatatcaaagtaaaca--ca-----aacaa 21350903  T
Q  207 caataataacaacacctagatctaatctag 236  Q
    ||| ||||||||||| ||||||||||||||    
T  21350904 caacaataacaacacttagatctaatctag 21350933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 376 - 450
Target Start/End: Original strand, 32744516 - 32744590
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccattttt 450  Q
    |||||||||||||||||||||||||||||||| |||   |||||||||||||||||   ||||||||||||||||||    
T  32744516 aaagtgatacaaatgagttacaagaaattagcttaaacaagctcacaaagaacaaa--ctaatttctacccattttt 32744590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 449
Target Start/End: Complemental strand, 24695209 - 24695104
Alignment:
Q  345 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac-aaagaacaaaacttaatttctacc 443  Q
    |||||||||| | ||| ||||| ||| |||||||||| |||||| |||||||||||||||||| ||  | || || ||||||||| || |||||||||||    
T  24695209 ggagagagcaaccctctaatccgctatgatgaaagtgttacaaaagagttacaagaaattagcttataaacttacaaaagaacaagacctaatttctacc 24695110  T
Q  444 catttt 449  Q
    ||||||    
T  24695109 catttt 24695104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 357 - 398
Target Start/End: Complemental strand, 25929406 - 25929365
Alignment:
Q  357 tctccaatccactaagatgaaagtgatacaaatgagttacaa 398  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  25929406 tctccaatccactaagatgaaagtgatacaaatgagttacaa 25929365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 363 - 451
Target Start/End: Complemental strand, 5366351 - 5366263
Alignment:
Q  363 atccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccatttttc 451  Q
    |||||||| |||||||||||||||||   |||||||||||||| | ||| | ||||||| ||| ||| |||||||||||||| ||||||    
T  5366351 atccactatgatgaaagtgatacaaagaggttacaagaaattatcttaaaatctcacaatgaaaaaatcttaatttctacccttttttc 5366263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 106 - 175
Target Start/End: Complemental strand, 29813432 - 29813361
Alignment:
Q  106 gttgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaac 175  Q
    ||||||||||||| ||||||||| |||||||||||  |||  ||||||||||||| ||||||||||||||||    
T  29813432 gttgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaagaaaagtagtaac 29813361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 357 - 448
Target Start/End: Original strand, 35925534 - 35925625
Alignment:
Q  357 tctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatttctacccattt 448  Q
    |||||||||||||| |||||||||| |||||| |||||||||||||||||  ||  |||| |||  |||||||||| ||||||||||||||||    
T  35925534 tctccaatccactatgatgaaagtgttacaaa-gagttacaagaaattagtttataagcttacactagaacaaaacctaatttctacccattt 35925625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 22834806 - 22834932
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    |||||||||||| |||||||||  ||||||||||| | |  ||||||||||||| |||| |||||||||||||  ||||    ||| || |||| | ||     
T  22834806 ttgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatca----aagtaaacacaggtaat 22834900  T
Q  205 aacaataataacaacacctagatctaatctag 236  Q
    ||||| ||||||||||||||||||||||||||    
T  22834901 aacaacaataacaacacctagatctaatctag 22834932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 402
Target Start/End: Original strand, 32143337 - 32143419
Alignment:
Q  319 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  32143337 ttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 32143419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 39153163 - 39153290
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    |||||| ||||| || |||||| |||||||||||| | |  ||||||||||||| |||| |||||||||||||   |||    ||| || |||||||  |    
T  39153163 ttgttgagaattcgggctcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatttca----aagtaaacacaagcggc 39153258  T
Q  205 aacaataataacaacacctagatctaatctag 236  Q
    | ||||||||||||||||||||||||||||||    
T  39153259 agcaataataacaacacctagatctaatctag 39153290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 313 - 387
Target Start/End: Complemental strand, 27986523 - 27986449
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaa 387  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  27986523 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 27986449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 347 - 452
Target Start/End: Original strand, 29100203 - 29100309
Alignment:
Q  347 agagagcacctctccaatccactaagatgaa-agtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctaccca 445  Q
    |||||||| ||||||| ||||||| ||| || |||||||||||   |||| ||||||||||| ||| | ||||||||||||||| | |||||||||| |     
T  29100203 agagagcagctctccattccactatgataaagagtgatacaaagaggttataagaaattagcttaaaaactcacaaagaacaaaccctaatttctactcg 29100302  T
Q  446 tttttca 452  Q
    |||||||    
T  29100303 tttttca 29100309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 198 - 240
Target Start/End: Original strand, 32744335 - 32744377
Alignment:
Q  198 aagcaacaacaataataacaacacctagatctaatctagaaat 240  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  32744335 aagcaacaacaatgataacaacacctagatctaatctagaaat 32744377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 402
Target Start/End: Complemental strand, 6794758 - 6794702
Alignment:
Q  345 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||    
T  6794758 ggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaa 6794702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 236
Target Start/End: Complemental strand, 761212 - 761087
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    |||||||||||| |||||||||||  ||||||||| | |  ||||||||||||| |||| ||||||||||||| |||||    |||  | | |||||||     
T  761212 ttgttgtgaattcggactcaaatc--acaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaaaatca----aagtgaactcaagcaat 761119  T
Q  205 aacaataataacaacacctagatctaatctag 236  Q
    ||||| |||| || ||||||||||||||||||    
T  761118 aacaacaatagcagcacctagatctaatctag 761087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 451
Target Start/End: Original strand, 9666556 - 9666623
Alignment:
Q  386 aaatgagttacaagaaattagcataag--agctcacaaagaacaaaacttaatttctacccatttttc 451  Q
    |||||||||||||||||||||| | |   ||||||||||||||||||  |||||||||||||||||||    
T  9666556 aaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaatctaatttctacccatttttc 9666623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 22835082 - 22835156
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    |||| |||||||||| |||||||||||||||| |||   |||||||||||||| |||| |||||||||||||||||    
T  22835082 aaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaacctaatttctacccatttt 22835156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 23391989 - 23392063
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    ||||||||||||||| |||||||||||||| | |||   |||||||||||||| ||||||||||||||| ||||||    
T  23391989 aaagtgatacaaatgggttacaagaaattatcttaaacaagctcacaaagaac-aaacttaatttctactcatttt 23392063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 387
Target Start/End: Complemental strand, 33386737 - 33386669
Alignment:
Q  319 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaa 387  Q
    ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  33386737 ttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 33386669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 39153441 - 39153515
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    |||| ||||||||||||||||||||||||||| |||   ||||||||| |||| |||| |||||||||||||||||    
T  39153441 aaagggatacaaatgagttacaagaaattagcttaaacaagctcacaatgaac-aaacctaatttctacccatttt 39153515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 402
Target Start/End: Complemental strand, 26928652 - 26928590
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  26928652 tctgggggagagagcaactctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 26928590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 319 - 402
Target Start/End: Original strand, 27452974 - 27453056
Alignment:
Q  319 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||||| ||||| ||||  || || |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  27452974 ttcggtccaatatgacctaatccgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 27453056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 32891459 - 32891388
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaat-aaataatgatgtgtggagtaaagaaaagtagtaacca 177  Q
    ||||||||| || ||||||||| ||||||||||| |||  ||||||||||||| |||| |||||||||||||    
T  32891459 ttgttgtgacttcggactcaaaactcacaccaatgaaactatgatgtgtggagcaaaggaaagtagtaacca 32891388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 23410216 - 23410257
Alignment:
Q  195 cacaagcaacaacaataataacaacacctagatctaatctag 236  Q
    |||||||||||| |||| ||||||||||||||||||||||||    
T  23410216 cacaagcaacaaaaatattaacaacacctagatctaatctag 23410257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 31314724 - 31314683
Alignment:
Q  195 cacaagcaacaacaataataacaacacctagatctaatctag 236  Q
    |||||||||||||||||||||||||||||| || ||||||||    
T  31314724 cacaagcaacaacaataataacaacacctaaatataatctag 31314683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 449
Target Start/End: Complemental strand, 760935 - 760861
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    |||| |||||||||| |||||||||||||||| |||   |||||||||||||| | || |||||||||||||||||    
T  760935 aaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-agacctaatttctacccatttt 760861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 452
Target Start/End: Original strand, 25517071 - 25517131
Alignment:
Q  392 gttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccatttttca 452  Q
    |||| ||||||||||| ||| ||||||||||||||||| | ||||||||||  ||||||||    
T  25517071 gttataagaaattagcttaaaagctcacaaagaacaaaccctaatttctacttatttttca 25517131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 29196466 - 29196541
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcat--aagagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    |||| |||||||||| ||| |||||||||||| |  |  ||||||||||||||||| | |||||||||||||||||    
T  29196466 aaagagatacaaatgggttccaagaaattagctttgacaagctcacaaagaacaaaccctaatttctacccatttt 29196541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 449
Target Start/End: Complemental strand, 29682447 - 29682373
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    |||| |||||||||| || ||||||||||||| |||   |||||||||||||| |||| |||||||||||||||||    
T  29682447 aaagggatacaaatgggtgacaagaaattagcttaaacaagctcacaaagaac-aaacataatttctacccatttt 29682373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 402
Target Start/End: Complemental strand, 2671647 - 2671585
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  2671647 tctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 2671585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 402
Target Start/End: Original strand, 7167280 - 7167342
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  7167280 tctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 7167342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 402
Target Start/End: Original strand, 8477398 - 8477460
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  8477398 tctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 8477460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 402
Target Start/End: Complemental strand, 8739124 - 8739062
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  8739124 tctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 8739062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 402
Target Start/End: Complemental strand, 9091362 - 9091300
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  9091362 tctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 9091300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 448
Target Start/End: Complemental strand, 9581370 - 9581297
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccattt 448  Q
    |||| |||||||||| |||| ||||||||||| |||   |||||||||||||| |||| ||||||||||||||||    
T  9581370 aaagggatacaaatgggttaaaagaaattagcttaaacaagctcacaaagaac-aaacctaatttctacccattt 9581297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 236
Target Start/End: Complemental strand, 29811238 - 29811110
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    |||||||||||| | ||||||| |||||||||||  |||  ||||| ||||||| |||| |||||||||||||   ||||||  ||  | |||||||||     
T  29811238 ttgttgtgaattcgaactcaaaactcacaccaatacaaaatatgatttgtggagcaaaggaaagtagtaaccaatttcaaag--ag--aacacaagcaat 29811143  T
Q  205 aa-caataataacaacacctagatctaatctag 236  Q
    || ||| ||||||| ||||||||||||||||||    
T  29811142 aatcaacaataacagcacctagatctaatctag 29811110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 402
Target Start/End: Complemental strand, 40372856 - 40372794
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  40372856 tctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 40372794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 1305990 - 1306046
Alignment:
Q  345 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  1305990 ggagatagcagctctccaatccactacgatgaaagtgttacaaa-gggttacaagaaa 1306046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 23410409 - 23410483
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    ||||||||||||||| |||| | ||||||||| |||   |||||||||||||  |||| |||||||||||||||||    
T  23410409 aaagtgatacaaatgggttatacgaaattagcttaaacaagctcacaaagaa-taaacataatttctacccatttt 23410483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 387
Target Start/End: Complemental strand, 39040063 - 39039995
Alignment:
Q  319 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaa 387  Q
    ||||||| ||||| ||||  ||||| | ||||| || ||||||||||||||| |||||||||| |||||    
T  39040063 ttcggtccaatatgacctaatctggggaagagaacaactctccaatccactatgatgaaagtgttacaa 39039995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 3e-43; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 313 - 458
Target Start/End: Complemental strand, 2838117 - 2837972
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| |||| |||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| | |||    
T  2838117 acccagttcggtccaatatgacctactctgggggagagagcacatctccaatccactaaaatgaaagtgatacaaatgagttacaagaaattagtacaag 2838018  T
Q  413 agctcacaaagaacaaaacttaatttctacccatttttcatctcac 458  Q
    ||||||||||||||| ||| |||||| | |||||||||||| ||||    
T  2838017 agctcacaaagaacacaacctaatttttgcccatttttcatgtcac 2837972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 313 - 452
Target Start/End: Complemental strand, 2869780 - 2869640
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| |||| |||| | |||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||     
T  2869780 acccagttcggtccaatatgacctactctaggggagagagtagctctccaatccactaagatgaaagtgatacaaaggagttacaagaaattagcttaaa 2869681  T
Q  413 agctcacaaagaac-aaaacttaatttctacccatttttca 452  Q
    |||||||||||||| ||||| ||||||||||||||||||||    
T  2869680 agctcacaaagaacaaaaacctaatttctacccatttttca 2869640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 313 - 458
Target Start/End: Complemental strand, 1345628 - 1345483
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccact-aagatgaaagtgatacaaatgagttacaagaaattagcataa 411  Q
    ||||| ||||||| ||||| |||| |||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| |     
T  1345628 acccagttcggtccaatatgacctactctgggggagagagcacctctccgatccacttaagatgaaagtgatacaaatgagttgcaagaaattagcacat 1345529  T
Q  412 gagctcacaaagaacaaaacttaatttctacccatttttcatctcac 458  Q
    ||||||||||| |||| ||| ||||||||||||||||||||| ||||    
T  1345528 gagctcacaaa-aacacaacctaatttctacccatttttcatgtcac 1345483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 313 - 449
Target Start/End: Original strand, 20522230 - 20522367
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||||| |||||| | |||||||||||||||  ||      
T  20522230 acccagttcggtccaatatgacctaatctgggggagagagcaaccctccaatccactatgatgaaagtgttacaaaagggttacaagaaattagattata 20522329  T
Q  413 agctcac-aaagaacaaaacttaatttctacccatttt 449  Q
    |||| || ||||||||| ||||||||||||||||||||    
T  20522330 agcttacaaaagaacaagacttaatttctacccatttt 20522367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 449
Target Start/End: Original strand, 21629985 - 21630090
Alignment:
Q  345 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatttctacc 443  Q
    |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||  ||  |||| ||| |||||||| ||||||||||||||    
T  21629985 ggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagtttataagcttacacaagaacaagacttaatttctacc 21630084  T
Q  444 catttt 449  Q
    ||||||    
T  21630085 catttt 21630090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 27149372 - 27149251
Alignment:
Q  322 ggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaa 421  Q
    |||| ||||| |||| || ||| |||||||||| |||||||||||||||  |||||||||||||||| | || ||||||||||| | ||| |||||||||    
T  27149372 ggtccaatatgacctactatgggggagagagcagctctccaatccactataatgaaagtgatacaaaggggtaacaagaaattaccttaaaagctcacaa 27149273  T
Q  422 agaacaaaacttaatttctacc 443  Q
    ||||||| |||||| |||||||    
T  27149272 agaacaagacttaacttctacc 27149251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 449
Target Start/End: Original strand, 31056086 - 31056191
Alignment:
Q  345 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac-aaagaacaaaacttaatttctacc 443  Q
    |||||||||| |||||||||||||||||||||||||| |||||| ||||||||| |||||||| ||  |||| || ||||||||| || |||||||||||    
T  31056086 ggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaataaattagcttataagcttacaaaagaacaagacctaatttctacc 31056185  T
Q  444 catttt 449  Q
    ||||||    
T  31056186 catttt 31056191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 108 - 236
Target Start/End: Original strand, 33162254 - 33162380
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    ||||||||||| |||||||||  ||||| ||||| | |  ||||||||||||| |||| |||||||||||||  |||||||||| |||   |||||||||    
T  33162254 tgttgtgaattcggactcaaaa-tcacatcaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagcaaacaa---caagcaaca 33162349  T
Q  206 acaataataacaacacctagatctaatctag 236  Q
    |||||||||||||||||||||||||||||||    
T  33162350 acaataataacaacacctagatctaatctag 33162380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 313 - 449
Target Start/End: Complemental strand, 34682421 - 34682284
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| || |  ||||| |||||||||| |||||||||||||||  ||||||||| |||||| |||||||||||||||||| ||      
T  34682421 acccagttcggtccaatatgacataatctgggggagagagcagctctccaatccactataatgaaagtgttacaaaagagttacaagaaattagcttaca 34682322  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
     ||| ||| |||||||| ||||||||||||||||||||    
T  34682321 ggcttacacaagaacaagacttaatttctacccatttt 34682284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 313 - 444
Target Start/End: Original strand, 13569338 - 13569470
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  13569338 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttata 13569437  T
Q  413 agctcaca-aagaacaaaacttaatttctaccc 444  Q
    || | ||| |||||||| || ||||||||||||    
T  13569438 agtttacacaagaacaagacctaatttctaccc 13569470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 108 - 236
Target Start/End: Complemental strand, 39285202 - 39285077
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaata-aataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaa 206  Q
    ||||||||||| ||||| ||| |||| ||||||| ||  ||||||||||||| ||||||||||||||||||   |||||| || ||    ||||||||||    
T  39285202 tgttgtgaattcggacttaaaactcataccaatacaactatgatgtgtggagcaaagaaaagtagtaaccaatttcaaagtaaaca----caagcaacaa 39285107  T
Q  207 caataataacaacacctagatctaatctag 236  Q
    ||||||||||||||||||||||||||||||    
T  39285106 caataataacaacacctagatctaatctag 39285077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 319 - 449
Target Start/End: Complemental strand, 10445525 - 10445394
Alignment:
Q  319 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctca 418  Q
    ||||||| ||||| ||||  ||||| |||||||||| |||||||||||||||  ||||||||| |||||| |||||||||||||||||| ||  | || |    
T  10445525 ttcggtccaatatgacctaatctgggggagagagcagctctccaatccactattatgaaagtgttacaaaagagttacaagaaattagcttacaatctta 10445426  T
Q  419 ca-aagaacaaaacttaatttctacccatttt 449  Q
    || |||||||| || |||||||||||||||||    
T  10445425 cacaagaacaagacctaatttctacccatttt 10445394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 313 - 446
Target Start/End: Complemental strand, 10707339 - 10707205
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  | ||| ||||||| || ||||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  10707339 acccagttcggtccaatatgacctaatatgggggagagaacaactctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttaca 10707240  T
Q  413 agctcaca-aagaacaaaacttaatttctacccat 446  Q
    |||| ||| |||||||| || ||||||||||||||    
T  10707239 agcttacacaagaacaagacctaatttctacccat 10707205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 310 - 452
Target Start/End: Complemental strand, 15903979 - 15903838
Alignment:
Q  310 gtaacccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcat 409  Q
    |||||| | |||| || ||||| |||| |||||  |||||||| |  |||||||||||||||||| ||||||||||||| | ||||||||||| |||| |    
T  15903979 gtaacctagttcgatccaatatgacctactctgacggagagagaaaatctccaatccactaagataaaagtgatacaaaggggttacaagaaa-tagctt 15903881  T
Q  410 aagagctcacaaagaacaaaacttaatttctacccatttttca 452  Q
    |  |||||||||||||||||   ||||||||||||||||||||    
T  15903880 acaagctcacaaagaacaaattctaatttctacccatttttca 15903838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 313 - 407
Target Start/End: Original strand, 34388868 - 34388962
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagc 407  Q
    ||||||||||||| ||||| ||||  ||||| |||||||| | ||||||||||||||| |||||||||| |||||| ||||||||||||||||||    
T  34388868 acccaattcggtccaatatgacctaatctgggggagagagtagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagc 34388962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 313 - 449
Target Start/End: Complemental strand, 14699094 - 14698958
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||| | |||||| |||||||||||||||||| ||      
T  14699094 acccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaag-gttacaaaagagttacaagaaattagcttata 14698996  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  14698995 agcttacacaagaacaagacctaatttctacccatttt 14698958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 313 - 449
Target Start/End: Original strand, 17865213 - 17865350
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||| ||| ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  17865213 acccagttcagtcgaatatgacctaatctgggggagagagcaaccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttata 17865312  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    |||| ||| |||||||| || ||||||||||| |||||    
T  17865313 agcttacacaagaacaagacataatttctacctatttt 17865350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 345 - 449
Target Start/End: Original strand, 40014967 - 40015072
Alignment:
Q  345 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac-aaagaacaaaacttaatttctacc 443  Q
    ||||||| || | ||||||||||||||||||||||||||||||||||||| | |||||||||| ||| | ||||| ||||||||| || ||||||||||     
T  40014967 ggagagaacatccctccaatccactaagatgaaagtgatacaaatgagttgcgagaaattagcttaaaaactcacaaaagaacaagacctaatttctact 40015066  T
Q  444 catttt 449  Q
    ||||||    
T  40015067 catttt 40015072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 313 - 449
Target Start/End: Original strand, 8040070 - 8040209
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaa--tgagttacaagaaattagcata 410  Q
    ||||| ||| ||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| ||||||   |||||||||||||||||| ||    
T  8040070 acccagttcagtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagagttacaagaaattagctta 8040169  T
Q  411 agagctcaca-aagaacaaaacttaatttctacccatttt 449  Q
      |||| ||| |||||||| || |||||||||||||||||    
T  8040170 caagcttacacaagaacaagacctaatttctacccatttt 8040209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 319 - 449
Target Start/End: Original strand, 33118152 - 33118283
Alignment:
Q  319 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctca 418  Q
    ||||||| ||||| ||||  | ||| |||||||||| | ||||||||||||| |||||||| | ||||||  ||||||||||||||||| ||  |||| |    
T  33118152 ttcggtccaatatgacctaatttgggggagagagcagccctccaatccactatgatgaaagagttacaaaatagttacaagaaattagcttataagctta 33118251  T
Q  419 ca-aagaacaaaacttaatttctacccatttt 449  Q
    || |||||||| ||||||||||||||||||||    
T  33118252 cacaagaacaagacttaatttctacccatttt 33118283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 108 - 236
Target Start/End: Complemental strand, 29868237 - 29868111
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    ||||||||||| |||||||||| ||||| ||||| | |  ||||||||||||| ||||||||||||||| ||   | |||| || ||    |||||||||    
T  29868237 tgttgtgaattcggactcaaatttcacagcaatacaaactatgatgtgtggagcaaagaaaagtagtaatcaattttaaagtaaaca----caagcaaca 29868142  T
Q  206 acaataataacaacacctagatctaatctag 236  Q
    |||||||||||||||||||||||||||||||    
T  29868141 acaataataacaacacctagatctaatctag 29868111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 108 - 236
Target Start/End: Complemental strand, 42362713 - 42362588
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    ||||||||||| |||||||||  ||||||||||| | |  ||||||||||||| |||| ||||||||||||| ||||||||  | |     |||||||||    
T  42362713 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaaaatcaaagtgaact----caagcaaca 42362619  T
Q  206 acaataataacaacacctagatctaatctag 236  Q
    |||||||||||||||||||||||||||||||    
T  42362618 acaataataacaacacctagatctaatctag 42362588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 107 - 236
Target Start/End: Complemental strand, 2838314 - 2838188
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaataa-ataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    ||||||||| || |||| |||| ||||||||||||| |   ||||||||||||||||| |||||||||||||| ||||    ||| || ||||| |||||    
T  2838314 ttgttgtgagttcggacacaaaactcacaccaataatactttgatgtgtggagtaaaggaaagtagtaaccactatca----aagtaaacacaaacaaca 2838219  T
Q  206 acaataataacaacacctagatctaatctag 236  Q
    |||| ||||||||||||||||| ||||||||    
T  2838218 acaacaataacaacacctagatataatctag 2838188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 449
Target Start/End: Complemental strand, 8390205 - 8390100
Alignment:
Q  345 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatttctacc 443  Q
    |||||||||| ||||||||||||||| |||||||||| || ||| |||||||||||||||||| ||  ||||  || |||||||| || |||||||||||    
T  8390205 ggagagagcagctctccaatccactatgatgaaagtgttaaaaaagagttacaagaaattagcttacaagcttgcacaagaacaagacctaatttctacc 8390106  T
Q  444 catttt 449  Q
    ||||||    
T  8390105 catttt 8390100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 723546 - 723672
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    |||||||||||| |||||||||  ||||||||||| | |  ||||||||||||| |||| |||||||||||||  |||||||  | ||    ||| ||||    
T  723546 ttgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaaca----caatcaac 723640  T
Q  205 aacaataataacaacacctagatctaatctag 236  Q
    ||||||||||||||||||||||||||||||||    
T  723641 aacaataataacaacacctagatctaatctag 723672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 333 - 452
Target Start/End: Complemental strand, 28770841 - 28770722
Alignment:
Q  333 acctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaact 432  Q
    |||| |||||||||| |||||| |||||| |||| ||| ||| | | |||||||||    ||||||||||||||| ||| |||||||||||||||||       
T  28770841 acctactctggaggatagagcagctctccgatcctctacgataagaatgatacaaagatattacaagaaattagcttaaaagctcacaaagaacaaactc 28770742  T
Q  433 taatttctacccatttttca 452  Q
    ||||||||||||||||||||    
T  28770741 taatttctacccatttttca 28770722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 34139572 - 34139698
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    |||||||||||| |||||||||  ||||||||||| | |  ||||||||||||| |||| |||||||||||||  |||||||  | ||    ||||||||    
T  34139572 ttgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaaca----caagcaac 34139666  T
Q  205 aacaataataacaacacctagatctaatctag 236  Q
    |||||||||||||| |||||||||||||||||    
T  34139667 aacaataataacaagacctagatctaatctag 34139698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 319 - 449
Target Start/End: Original strand, 39482947 - 39483078
Alignment:
Q  319 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctca 418  Q
    ||||||| ||||| ||||  | ||| ||||||||||   ||||||||||||| ||||||| || |||||| |||||||||||||||||| ||  |||| |    
T  39482947 ttcggtccaatatgacctaatatgggggagagagcaggcctccaatccactatgatgaaaatgttacaaaagagttacaagaaattagcttataagctta 39483046  T
Q  419 ca-aagaacaaaacttaatttctacccatttt 449  Q
    || |||||||| || |||||||||||||||||    
T  39483047 cacaagaacaagacctaatttctacccatttt 39483078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 146 - 236
Target Start/End: Complemental strand, 11067629 - 11067543
Alignment:
Q  146 atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatctaatctag 236  Q
    ||||||||||||| |||| |||||||||||||  |||||||  | ||    ||||||||||||||||||||||||||||||||||||||||    
T  11067629 atgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaaca----caagcaacaacaataataacaacacctagatctaatctag 11067543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 347 - 449
Target Start/End: Complemental strand, 33528674 - 33528576
Alignment:
Q  347 agagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccat 446  Q
    |||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||  ||||    |||||||| || ||||||||||||||    
T  33528674 agagagcaaccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagct----aagaacaagacctaatttctacccat 33528579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 108 - 236
Target Start/End: Complemental strand, 36773926 - 36773800
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    ||||||||||| ||| |||||  ||||||||||| | |  ||||||||||||| |||  |||||||||||||  |||||||| | |||    ||||||||    
T  36773926 tgttgtgaattcggattcaaaa-tcacaccaatacaaactatgatgtgtggagcaaatgaaagtagtaaccaatatcaaagccaacaag---aagcaaca 36773831  T
Q  206 acaataataacaacacctagatctaatctag 236  Q
    |||||||||||||||||||||||||||||||    
T  36773830 acaataataacaacacctagatctaatctag 36773800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 448
Target Start/End: Complemental strand, 28259264 - 28259129
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  | ||| |||||||||| ||||||||||||||| |||||||||| |||||| ||||||||||||| |||| |       
T  28259264 acccagttcggtccaatatgacctaatttgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaatagcttgca 28259166  T
Q  413 agctcaca-aagaacaaaacttaatttctacccattt 448  Q
    |||| ||| |||||||| |  ||||||||||||||||    
T  28259165 agcttacacaagaacaagatctaatttctacccattt 28259129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 36317812 - 36317939
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaata--aataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    |||||||||||| ||||||||| ||||||||||||  || |||||||||| ||  |||  |||||||||||||   |||||| || ||    ||||||||    
T  36317812 ttgttgtgaatttggactcaaaactcacaccaatacaaacaatgatgtgtagaacaaatgaaagtagtaaccaatttcaaagtaaaca----caagcaac 36317907  T
Q  205 aacaataataacaacacctagatctaatctag 236  Q
    | ||||||||||||||||||||| ||||||||    
T  36317908 agcaataataacaacacctagatttaatctag 36317939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 108 - 236
Target Start/End: Original strand, 11151395 - 11151521
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    ||||||||||| | ||||||| |||| ||||||| | |  ||||||||||||| ||| ||||||||||| ||  |||||||  | ||    |||||||||    
T  11151395 tgttgtgaattcgaactcaaaactcataccaatacaaactatgatgtgtggagcaaataaaagtagtaatcaatatcaaagtgaaca----caagcaaca 11151490  T
Q  206 acaataataacaacacctagatctaatctag 236  Q
    ||||||||||||||| |||||||||||||||    
T  11151491 acaataataacaacagctagatctaatctag 11151521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 236
Target Start/End: Original strand, 14633624 - 14633753
Alignment:
Q  104 cagttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagc 201  Q
    |||||||||||| ||  ||||||||  ||||||||||| | |  |||||||||| || |||| |||||||||||||  |||||||  | ||    |||||    
T  14633624 cagttgttgtgatttcagactcaaaa-tcacaccaatacaaactatgatgtgtgaagcaaaggaaagtagtaaccaatatcaaagtgaaca----caagc 14633718  T
Q  202 aacaacaataataacaacacctagatctaatctag 236  Q
    |||||||||||||||||||||||||||||||||||    
T  14633719 aacaacaataataacaacacctagatctaatctag 14633753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 347 - 452
Target Start/End: Complemental strand, 18674454 - 18674349
Alignment:
Q  347 agagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccat 446  Q
    |||||||| |||||| ||| |||| ||  | |||||||| || | |||||||||||||||  ||| ||||||||||||||||| | ||||||||| ||||    
T  18674454 agagagcagctctccgatctactatgacaagagtgataccaaggggttacaagaaattagtttaaaagctcacaaagaacaaaccataatttctatccat 18674355  T
Q  447 ttttca 452  Q
    ||||||    
T  18674354 ttttca 18674349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 339 - 452
Target Start/End: Original strand, 35397548 - 35397659
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaattt 438  Q
    ||||||||||| |||| |||| |||||||||||||||||||||||| |||   ||||| | |||||||| ||| || ||| ||||||| |||| ||||||    
T  35397548 tctggaggagatagcagctcttcaatccactaagatgaaagtgatataaagaggttacga-aaattagcttaaaaggtcataaagaac-aaacctaattt 35397645  T
Q  439 ctacccatttttca 452  Q
    ||| ||||||||||    
T  35397646 ctatccatttttca 35397659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 234
Target Start/End: Original strand, 2334218 - 2334341
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    |||||||||||  ||||||||  ||||||||||| | |  |||||||||| || |||| |||||||||||||   |||||| || ||    |||||||||    
T  2334218 tgttgtgaattcagactcaaaa-tcacaccaatacaaactatgatgtgtgaagcaaaggaaagtagtaaccaatttcaaagtaaaca----caagcaaca 2334312  T
Q  206 acaataataacaacacctagatctaatct 234  Q
    |||||||||||||||||||||||||||||    
T  2334313 acaataataacaacacctagatctaatct 2334341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 11151671 - 11151745
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    ||||||||||||||| |||||||||||||||| |||   ||||||||||||||||| | |||||||||||||||||    
T  11151671 aaagtgatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaatc-taatttctacccatttt 11151745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 345 - 448
Target Start/End: Complemental strand, 23078525 - 23078422
Alignment:
Q  345 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatttctacc 443  Q
    ||||||| || ||||||||||||||| |||||||||| || ||| ||||||||||||| |||| |   |||| ||| |||||||| ||||||||||||||    
T  23078525 ggagagaacaactctccaatccactatgatgaaagtgttagaaa-gagttacaagaaaatagcttgcaagcttacacaagaacaagacttaatttctacc 23078427  T
Q  444 cattt 448  Q
    |||||    
T  23078426 cattt 23078422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 14202310 - 14202349
Alignment:
Q  197 caagcaacaacaataataacaacacctagatctaatctag 236  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14202310 caagcaacaacaataataacaacacctagatctaatctag 14202349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 313 - 407
Target Start/End: Complemental strand, 16940296 - 16940202
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagc 407  Q
    ||||||||||||| ||||| || |  ||||| ||| ||| || | ||||||||||||| |||||||||| |||||| || |||||||||||||||    
T  16940296 acccaattcggtccaatatgacataatctgggggaaagatcagccctccaatccactatgatgaaagtgttacaaaagaattacaagaaattagc 16940202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 313 - 407
Target Start/End: Complemental strand, 17010961 - 17010867
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagc 407  Q
    ||||||||||||| ||||| || |  ||||| ||| ||| || | ||||||||||||| |||||||||| |||||| || |||||||||||||||    
T  17010961 acccaattcggtccaatatgacataatctgggggaaagatcagccctccaatccactatgatgaaagtgttacaaaagaattacaagaaattagc 17010867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 106 - 236
Target Start/End: Original strand, 36987873 - 36988001
Alignment:
Q  106 gttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaa 203  Q
    ||||||||||||| |||||||||  ||||||||||| | |  ||||||||||||| |||| |||||||||||||   |||    ||| || |||||||||    
T  36987873 gttgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatttca----aagtaaacacaagcaa 36987967  T
Q  204 caa-caataataacaacacctagatctaatctag 236  Q
     || ||| ||||||||||||||||||||||||||    
T  36987968 taatcaacaataacaacacctagatctaatctag 36988001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 449
Target Start/End: Complemental strand, 11690589 - 11690515
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    |||| |||||||||| |||||||||||||||| |||   |||||||||||||| |||| |||||||||||||||||    
T  11690589 aaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaacctaatttctacccatttt 11690515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 449
Target Start/End: Complemental strand, 42362440 - 42362366
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    |||| |||||||||| |||||||||||||||| |||   |||||||||||||| |||| |||||||||||||||||    
T  42362440 aaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaacctaatttctacccatttt 42362366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 402
Target Start/End: Original strand, 3491786 - 3491848
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  3491786 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 3491848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 11690857 - 11690787
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaac 175  Q
    |||||||||||| ||||||||| |||||||||||  |||  ||||||||||||| |||| |||||||||||    
T  11690857 ttgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaac 11690787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 402
Target Start/End: Original strand, 25398531 - 25398593
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  25398531 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 25398593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 402
Target Start/End: Original strand, 25403669 - 25403731
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  25403669 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 25403731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 402
Target Start/End: Original strand, 25407658 - 25407720
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  25407658 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 25407720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 451
Target Start/End: Original strand, 723824 - 723900
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttttc 451  Q
    |||| |||||||||| |||||||||||||||| |||   |||||||||||||| |||| ||||||||||||| |||||    
T  723824 aaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaacctaatttctacccagttttc 723900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 236
Target Start/End: Complemental strand, 24885953 - 24885828
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    ||||||||||| |||||||||  ||||||||||| | |  |||||||||| || |||| ||| |||||||||  |||||||  | ||    |||| ||||    
T  24885953 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtgtagcaaaggaaaatagtaaccaatatcaaagtgaaca----caagaaaca 24885859  T
Q  206 acaataataacaacacctagatctaatctag 236  Q
    ||||| |||||||||||||||||||||||||    
T  24885858 acaatgataacaacacctagatctaatctag 24885828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 449
Target Start/End: Original strand, 14202497 - 14202559
Alignment:
Q  388 atgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    |||||||||||||||||||| |||   |||||||||||||| |||| |||||||||||||||||    
T  14202497 atgagttacaagaaattagcttaaacaagctcacaaagaac-aaacataatttctacccatttt 14202559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 14633906 - 14633980
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    |||| |||||||||| |||||||||||||||| |||   |||||||||||||| || | |||||||||||||||||    
T  14633906 aaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aatcctaatttctacccatttt 14633980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 449
Target Start/End: Complemental strand, 42039750 - 42039619
Alignment:
Q  319 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa-ttagcataagagctc 417  Q
    ||||||| ||||| ||||  ||||  |||||||||| ||||| ||||||||| |||||||||| ||| || ||||||||||||| ||||| |   ||||     
T  42039750 ttcggtccaatatgacctaatctgtgggagagagcagctctctaatccactatgatgaaagtgttacgaa-gagttacaagaaaattagcttgcaagctt 42039652  T
Q  418 aca-aagaacaaaacttaatttctacccatttt 449  Q
    ||| || ||||| || |||||||||||||||||    
T  42039651 acacaaaaacaagacctaatttctacccatttt 42039619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 240
Target Start/End: Original strand, 6594804 - 6594934
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    ||||||||||| |||||||||  ||||||||||| | |  ||||||||||||| |||| |||||||||||||  ||||    |||  | |||||| || |    
T  6594804 tgttgtgaatttggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaagtaaagtagtaaccaatatca----aagtgaacacaagtaata 6594898  T
Q  206 a-caataataacaacacctagatctaatctagaaat 240  Q
    | ||| ||||||| ||||||||||||||||||||||    
T  6594899 atcaacaataacagcacctagatctaatctagaaat 6594934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 402
Target Start/End: Complemental strand, 11098988 - 11098926
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  11098988 tctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 11098926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 402
Target Start/End: Original strand, 14291524 - 14291586
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  14291524 tctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 14291586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 402
Target Start/End: Complemental strand, 9296456 - 9296400
Alignment:
Q  345 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  9296456 ggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 9296400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 449
Target Start/End: Complemental strand, 24885742 - 24885675
Alignment:
Q  383 tacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    |||||||| |||||||||||||||| |||   |||||||||||||| |||| |||||||||| ||||||    
T  24885742 tacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaacctaatttctactcatttt 24885675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 4561435 - 4561359
Alignment:
Q  111 tgtgaattgggactcaaatctcacaccaataaataatgatgtgtgg-agtaaagaaaagtagtaaccacaatcaaag 186  Q
    |||||||  ||||||||||||||||||||||||    ||||||||| |  ||||||||||||||||||  |||||||    
T  4561435 tgtgaatatggactcaaatctcacaccaataaacttagatgtgtggaacaaaagaaaagtagtaaccaatatcaaag 4561359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 452
Target Start/End: Original strand, 27139843 - 27139951
Alignment:
Q  344 aggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacc 443  Q
    ||||||||||| ||||||||| ||||| ||  | |||||||||||   |||||| |||||||   | | ||||||||||| ||||| | ||||||||||     
T  27139843 aggagagagcagctctccaattcactatgaaaatagtgatacaaaaatgttacaggaaattaaatttaaagctcacaaagtacaaaccctaatttctaca 27139942  T
Q  444 catttttca 452  Q
    ||| |||||    
T  27139943 catatttca 27139951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 34139851 - 34139925
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    |||| |||||| ||| |||||||||||||||| |||   |||||||||||||| || | |||||||||||||||||    
T  34139851 aaagggatacatatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttctacccatttt 34139925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 4e-42; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 313 - 452
Target Start/End: Complemental strand, 28617312 - 28617173
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| |||| |||||| |||||||||| ||||||||||||||||||||||||||||||||  | |||||||||||||||| |||     
T  28617312 acccagttcggtccaatatgacctactctgggggagagagcagctctccaatccactaagatgaaagtgatacaatggggttacaagaaattagcttaaa 28617213  T
Q  413 agctcacaaagaacaaaacttaatttctacccatttttca 452  Q
    ||||||||||||||||||| ||||||||||| ||||||||    
T  28617212 agctcacaaagaacaaaacctaatttctacctatttttca 28617173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 5817350 - 5817218
Alignment:
Q  319 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctca 418  Q
    ||||||| ||||| |||| |||||| |||||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||| |||||||||||||    
T  5817350 ttcggtccaatatgacctactctgg-ggagagagcagctctccaatccactaatatgaaagtgatacaaaggggttacaagaaatttgcataagagctca 5817252  T
Q  419 caaagaacaaaacttaatttctacccatttttca 452  Q
    ||||||||||||| ||||||||| ||||||||||    
T  5817251 caaagaacaaaacctaatttctatccatttttca 5817218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 310 - 450
Target Start/End: Original strand, 3047261 - 3047402
Alignment:
Q  310 gtaacccaattcggtctaatataacctcctctggagg-agagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagca 408  Q
    |||||||| ||||||| ||||| |||| |||||| || |||||||   | ||||||||||||| ||||||||| ||||||||||||||||||||| | |     
T  3047261 gtaacccagttcggtccaatatgacctgctctggggggagagagccgttatccaatccactaatatgaaagtggtacaaatgagttacaagaaatcaact 3047360  T
Q  409 taagagctcacaaagaacaaaacttaatttctacccattttt 450  Q
    ||| |||||||||||||||| || ||||||||||||||||||    
T  3047361 taaaagctcacaaagaacaagacctaatttctacccattttt 3047402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 313 - 450
Target Start/End: Original strand, 29159813 - 29159951
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||| | |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  29159813 acccagttcggtccaatatgacctaatctaggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttaca 29159912  T
Q  413 agctcaca-aagaacaaaacttaatttctacccattttt 450  Q
    |||| ||| |||||||| || ||||||||||||||||||    
T  29159913 agcttacacaagaacaagacctaatttctacccattttt 29159951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 313 - 450
Target Start/End: Complemental strand, 33332537 - 33332399
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| |||| |||||||| ||||  ||||| |||||||||| | |||||||||||||||||||||||| |||||| |||||||||||||||||| ||      
T  33332537 acccagttcgatctaatatgacctaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaaaagagttacaagaaattagcttata 33332438  T
Q  413 agctcac-aaagaacaaaacttaatttctacccattttt 450  Q
    |||| || ||||||||| || |||||||||| |||||||    
T  33332437 agcttacaaaagaacaagacctaatttctactcattttt 33332399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 313 - 449
Target Start/End: Complemental strand, 2647783 - 2647646
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||||||||| | ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  2647783 acccaattcggcccaatatgacctattctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttata 2647684  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  2647683 agcttacacaagaacaagacctaatttctacccatttt 2647646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 313 - 449
Target Start/End: Complemental strand, 46516397 - 46516260
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||| | |||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||||| |||     
T  46516397 acccagttcggtccaatatgacctaatctaggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttaaa 46516298  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  46516297 agcttacacaagaacaagacataatttctacccatttt 46516260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 313 - 458
Target Start/End: Original strand, 2580400 - 2580545
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||||||||||| ||||| ||||  ||||| |||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||| |||| |       
T  2580400 acccaattcggtccaatatgacctagtctgggggagagagcagctctccaatccactaagatgaaagtgttac-aatgagttacaagaaaatagcttgca 2580498  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttttcatctcac 458  Q
    |||| ||| ||||||||  | || |||||||||||||||||| ||||    
T  2580499 agcttacacaagaacaagtcctagtttctacccatttttcatatcac 2580545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 313 - 449
Target Start/End: Original strand, 55958 - 56094
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  55958 acccagttcggtccaatatgacctaatctgg-ggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttata 56056  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  56057 agcttacacaagaacaagacctaatttctacccatttt 56094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 313 - 452
Target Start/End: Complemental strand, 23403100 - 23402961
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||||||||||||||||| ||||  ||||  |||| ||||| | |||||||| ||||||||||||||| ||| ||||||||||||||||||||| ||      
T  23403100 acccaattcggtctaatatgacctaatctgagggagtgagcagccctccaatctactaagatgaaagtgttac-aatgagttacaagaaattagcttata 23403002  T
Q  413 agctcac-aaagaacaaaacttaatttctacccatttttca 452  Q
    |||| || |||||||||  | ||||||||||||||||||||    
T  23403001 agcttacaaaagaacaagtcctaatttctacccatttttca 23402961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 313 - 458
Target Start/End: Original strand, 20284099 - 20284244
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | |||||||||||||||||||||||| ||| |||| |||||||||||||||| ||      
T  20284099 acccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactaagatgaaagtgttac-aatgcgttacaagaaattagcttata 20284197  T
Q  413 agctcac-aaagaacaaaacttaatttctacccatttttcatctcac 458  Q
    |||| || |||||||||  | |||||||||||| |||||||| ||||    
T  20284198 agcttacaaaagaacaagtcctaatttctacccttttttcatatcac 20284244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 108 - 236
Target Start/End: Original strand, 41317238 - 41317364
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    ||||||||||| | |||||||||||||||||||| | |  ||||||| ||||| |||| |||||||||||||  |||||||  | ||    |||||||||    
T  41317238 tgttgtgaattcgaactcaaatctcacaccaatacaaactatgatgtttggagcaaaggaaagtagtaaccaatatcaaagtgaaca----caagcaaca 41317333  T
Q  206 acaataataacaacacctagatctaatctag 236  Q
    |||||||||||||||||||||||||||||||    
T  41317334 acaataataacaacacctagatctaatctag 41317364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 108 - 236
Target Start/End: Original strand, 47675936 - 47676062
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    ||||||||||| |||| |||| |||||||||||| | |  ||||||||||||| |||| |||||||||||||  |||||||  | ||    |||||||||    
T  47675936 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaaca----caagcaaca 47676031  T
Q  206 acaataataacaacacctagatctaatctag 236  Q
    |||||||||||||||||||||||||||||||    
T  47676032 acaataataacaacacctagatctaatctag 47676062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 146 - 236
Target Start/End: Original strand, 36146251 - 36146338
Alignment:
Q  146 atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatctaatctag 236  Q
    ||||||||||||| |||| |||||||||||||  |||||||||| |||   |||||||||||||||||||||||| |||||||||||||||    
T  36146251 atgatgtgtggagcaaaggaaagtagtaaccaatatcaaagcaaacaa---caagcaacaacaataataacaacatctagatctaatctag 36146338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 313 - 458
Target Start/End: Complemental strand, 9190095 - 9189949
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaag-aaattagcataa 411  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| |||||||||||||||||||||||||| ||| ||||||||||||| ||| |||| |      
T  9190095 acccagttcggtccaatatgacctagtctgggggagagagcagctctccaatccactaagatgaaagtgttac-aatgagttacaagaaaaatagcttgc 9189997  T
Q  412 gagctcaca-aagaacaaaacttaatttctacccatttttcatctcac 458  Q
     |||| ||| ||||||||  | ||||||||||||||||||||| ||||    
T  9189996 aagcttacacaagaacaagtcctaatttctacccatttttcatatcac 9189949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 14069632 - 14069759
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    |||||||||||| ||||||||| |||||||||||| | |  ||||||||||||| |||| ||||||||||| |   |||||| || ||    ||||||||    
T  14069632 ttgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaactaatttcaaagtaaaca----caagcaac 14069727  T
Q  205 aacaataataacaacacctagatctaatctag 236  Q
    || |||||||||||||||||||||||||||||    
T  14069728 aataataataacaacacctagatctaatctag 14069759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 14379660 - 14379787
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    |||||||||||| ||||||||| |||||||||||| | |  ||||||||||||| |||| ||||||||||| |   |||||| || ||    ||||||||    
T  14379660 ttgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaactaatttcaaagtaaaca----caagcaac 14379755  T
Q  205 aacaataataacaacacctagatctaatctag 236  Q
    || |||||||||||||||||||||||||||||    
T  14379756 aataataataacaacacctagatctaatctag 14379787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 339 - 449
Target Start/End: Original strand, 35960852 - 35960963
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac-aaagaacaaaacttaatt 437  Q
    ||||| |||||||||| | |||||| |||||| |||||||||| ||||||||||||| ||||||||||| ||  |||| || ||||||||| || |||||    
T  35960852 tctgggggagagagcagccctccaaaccactatgatgaaagtgttacaaatgagttagaagaaattagcttataagcttacaaaagaacaatacctaatt 35960951  T
Q  438 tctacccatttt 449  Q
    ||||||||||||    
T  35960952 tctacccatttt 35960963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 108 - 236
Target Start/End: Complemental strand, 19502547 - 19502421
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    |||||||||||  |||||||| ||||||| |||| | |  ||||||||||||| |||| |||||||||||||   |||||| ||   || ||||||||||    
T  19502547 tgttgtgaattcagactcaaaactcacactaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatttcaaagtaa---at-acaagcaaca 19502452  T
Q  206 acaataataacaacacctagatctaatctag 236  Q
    |||||||||||||||||||||||||||||||    
T  19502451 acaataataacaacacctagatctaatctag 19502421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 49091705 - 49091806
Alignment:
Q  347 agagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatttctaccca 445  Q
    |||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||| | ||  |||| ||| |||||||| || |||||||||||||    
T  49091705 agagagcaactctccaatccactatgatgaaagtgttacaaaagagttacaagaaattaccttataagcttacacaagaacaagacctaatttctaccca 49091804  T
Q  446 tt 447  Q
    ||    
T  49091805 tt 49091806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 449
Target Start/End: Original strand, 21983294 - 21983432
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatac-aaatgagttacaagaaattagcataa 411  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| ||| ||| ||||||||||||| |||| |      
T  21983294 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaaagagttacaagaaaatagcttgc 21983393  T
Q  412 gagctcaca-aagaacaaaacttaatttctacccatttt 449  Q
     |||| ||| |||||||| || || ||||||||||||||    
T  21983394 aagcttacacaagaacaagacctagtttctacccatttt 21983432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 106 - 236
Target Start/End: Complemental strand, 23555412 - 23555283
Alignment:
Q  106 gttgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaa 203  Q
    ||||||||||||| ||||||||| |||||||||||  |||  ||||||||||||| |||| |||||||||||||  ||||    |||  | |||||||||    
T  23555412 gttgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatca----aagtgaacacaagcaa 23555317  T
Q  204 caa-caataataacaacacctagatctaatctag 236  Q
     || ||| ||||||||||||||||||||||||||    
T  23555316 taatcaacaataacaacacctagatctaatctag 23555283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 107 - 236
Target Start/End: Complemental strand, 18127016 - 18126888
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    |||||||||||| ||||||||| |||||||||||  |||  |||||||||||||||||| |||||||||| ||  ||||    |||  | |||||||||     
T  18127016 ttgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagtaaaggaaagtagtaatcaatatca----aagtgaacacaagcaat 18126921  T
Q  205 aa-caataataacaacacctagatctaatctag 236  Q
    || ||| ||||||||||||||||||||||||||    
T  18126920 aatcaagaataacaacacctagatctaatctag 18126888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 387
Target Start/End: Complemental strand, 9185252 - 9185178
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaa 387  Q
    ||||| ||||||| ||||||||||  ||||| |||||||| | |||||||||||||||||||||||||| |||||    
T  9185252 acccagttcggtccaatataacctagtctgggggagagagaagctctccaatccactaagatgaaagtgttacaa 9185178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 30024641 - 30024682
Alignment:
Q  195 cacaagcaacaacaataataacaacacctagatctaatctag 236  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  30024641 cacaagcaacaacaataataacaacacctagatctaatctag 30024682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 228
Target Start/End: Original strand, 24525345 - 24525424
Alignment:
Q  146 atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatc 228  Q
    ||||| |||| || ||||||||||||||| ||  |||||||||| |||   ||||||||||||||||||||||||||||||||    
T  24525345 atgatatgtgtagcaaagaaaagtagtaatcaatatcaaagcaaacaa---caagcaacaacaataataacaacacctagatc 24525424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 449
Target Start/End: Complemental strand, 4796756 - 4796617
Alignment:
Q  311 taacccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcata 410  Q
    ||||||| ||||||| || || ||||  ||||| ||||| |||| | ||| ||||||||| ||||||| || |||||| |||||||||||||||||| ||    
T  4796756 taacccagttcggtccaaaatgacctaatctgggggagaaagcagccctcaaatccactatgatgaaattgttacaaaagagttacaagaaattagctta 4796657  T
Q  411 agagctcaca-aagaacaaaacttaatttctacccatttt 449  Q
      |||| ||| |||||||| || | |||| ||||||||||    
T  4796656 taagcttacacaagaacaagacctcatttatacccatttt 4796617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 449
Target Start/End: Original strand, 24525985 - 24526051
Alignment:
Q  385 caaatgagttacaagaaattagcat--aagagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    ||||||||||||||||||||||| |  |  ||||||||||||||||||| |||||||||||||||||    
T  24525985 caaatgagttacaagaaattagctttgacaagctcacaaagaacaaaacctaatttctacccatttt 24526051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 47673743 - 47673870
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    ||||| |||||| |||| |||| |||||||||||| | |  ||||||||||||  |||  |||||||||||||  |||||||  | ||    ||| ||||    
T  47673743 ttgttatgaattcggacacaaaactcacaccaatacaaactatgatgtgtggaacaaaagaaagtagtaaccaatatcaaagtgaaca----caaacaac 47673838  T
Q  205 aacaataataacaacacctagatctaatctag 236  Q
    ||||||||||||||||||||||||||||||||    
T  47673839 aacaataataacaacacctagatctaatctag 47673870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 26417685 - 26417559
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    ||||||||||| ||||||||| |||||||||||  |||  ||||| |||||||||||| |||||||||||||  ||||    ||| || ||||||||| |    
T  26417685 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatatgtggagtaaaggaaagtagtaaccaatatca----aagtaaccacaagcaata 26417590  T
Q  206 a-caataataacaacacctagatctaatcta 235  Q
    | ||| ||||||| ||||||||| |||||||    
T  26417589 atcaacaataacagcacctagatataatcta 26417559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 108 - 236
Target Start/End: Original strand, 31105200 - 31105322
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaataaata-atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaa 206  Q
    ||||||||||| | || |||| ||||||||||||||   |||||||||||||||||| |||||||||| ||  ||||    ||| || ||||||||||||    
T  31105200 tgttgtgaattcgaacacaaaactcacaccaataaaactatgatgtgtggagtaaaggaaagtagtaatcaatatca----aagtaaacacaagcaacaa 31105295  T
Q  207 caataataacaacacctagatctaatctag 236  Q
    |   |||||||||||| |||||||||||||    
T  31105296 c---aataacaacaccaagatctaatctag 31105322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 108 - 236
Target Start/End: Complemental strand, 31519258 - 31519133
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    ||||||||||| ||||||||| ||||| |||||  |||||| ||||||||||| ||| |||| ||||||  |  ||||| | ||    ||| ||||| ||    
T  31519258 tgttgtgaatttggactcaaaactcacgccaatgaaaataa-gatgtgtggagcaaataaaaatagtaattaatatcaatgtaa----tcataagcagca 31519164  T
Q  206 acaataataacaacacctagatctaatctag 236  Q
    |||||||||||||||||||||||||||||||    
T  31519163 acaataataacaacacctagatctaatctag 31519133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 340 - 402
Target Start/End: Complemental strand, 44848744 - 44848683
Alignment:
Q  340 ctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    |||| |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||    
T  44848744 ctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaa 44848683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 4586531 - 4586459
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaa--taaataatgatgtgtggagtaaagaaaagtagtaacca 177  Q
    |||||||||||| ||||||||||||||||||||  ||||  ||||||||||||| |||| ||||| |||||||    
T  4586531 ttgttgtgaattcggactcaaatctcacaccaatgtaaactatgatgtgtggagcaaaggaaagtggtaacca 4586459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 8153621 - 8153581
Alignment:
Q  195 cacaagcaacaacaataataacaacacctagatctaatcta 235  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  8153621 cacaagcaacaacaataataacaacacctagatctgatcta 8153581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 236
Target Start/End: Original strand, 495822 - 495913
Alignment:
Q  141 aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatctaatctag 236  Q
    |||| ||||| ||||||| |||| |||||||||||||  ||||    ||| || ||||| ||| ||||| ||||||||||||||||||||||||||    
T  495822 aaattatgatatgtggagcaaaggaaagtagtaaccaatatca----aagtaaacacaaacaataacaacaataacaacacctagatctaatctag 495913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 240
Target Start/End: Original strand, 23564893 - 23564995
Alignment:
Q  131 tcacaccaataaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatcta 230  Q
    |||||| |||||| |  |||||||||||| |||||||||||| ||||  ||||    ||| || |||||||||||||   |||||||| |||||||||||    
T  23564893 tcacactaataaacatagatgtgtggagtgaagaaaagtagtgaccaatatca----aagtaaccacaagcaacaac---aataacaaaacctagatcta 23564985  T
Q  231 atctagaaat 240  Q
    ||||||||||    
T  23564986 atctagaaat 23564995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 236
Target Start/End: Original strand, 38671025 - 38671150
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    ||||||||||| |||||||||  ||||||||||| | |  ||||||||||||| |||| ||| ||||||| | ||||||||  | ||    ||||||||     
T  38671025 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaaatagtaacaaaaatcaaagtgaaca----caagcaacg 38671119  T
Q  206 acaataataacaacacctagatctaatctag 236  Q
    |||||||| |||||||||||||| |||||||    
T  38671120 acaataatgacaacacctagatcaaatctag 38671150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 18413681 - 18413737
Alignment:
Q  345 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  18413681 ggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 18413737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 458
Target Start/End: Complemental strand, 9235596 - 9235524
Alignment:
Q  387 aatgagttacaagaaattagcataagagctcacaaa-gaacaaaacttaatttctacccatttttcatctcac 458  Q
    ||||||||||||||||||||| ||  |||| ||||| ||||||  | ||||||||||||||||||||| ||||    
T  9235596 aatgagttacaagaaattagcttataagcttacaaaagaacaagtcctaatttctacccatttttcatatcac 9235524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 38671302 - 38671376
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    ||||||||||||||| ||||||| |||||||| |||   |||||||||||||| || | |||||||||||||||||    
T  38671302 aaagtgatacaaatgtgttacaataaattagcttaaacaagctcacaaagaac-aaccctaatttctacccatttt 38671376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 451
Target Start/End: Original strand, 41649091 - 41649166
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagc-ataagagctcacaaagaacaaaacttaatttctacccatttttc 451  Q
    |||| |||||||||| |||||||||||||||| | |  |||||||||||||| |||| ||||||||||| |||||||    
T  41649091 aaagggatacaaatgggttacaagaaattagctaaacaagctcacaaagaac-aaacctaatttctaccaatttttc 41649166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 402
Target Start/End: Complemental strand, 1533505 - 1533443
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  1533505 tctgggggagagagcatctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 1533443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 402
Target Start/End: Original strand, 2058001 - 2058063
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  2058001 tctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 2058063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 446
Target Start/End: Original strand, 2479381 - 2479479
Alignment:
Q  348 gagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatttctacccat 446  Q
    ||||||| ||||| ||||||||| |||||||||| |||||| |||||| |||||| |||| |   |||| ||| |||||||| || ||||||||||||||    
T  2479381 gagagcagctctcaaatccactatgatgaaagtgttacaaa-gagttataagaaaatagcttgcaagcttacacaagaacaagacctaatttctacccat 2479479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 402
Target Start/End: Original strand, 18408799 - 18408861
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  18408799 tctgggggagagagcagctctccaatccagtatgatgaaagtgttacaaa-gggttacaagaaa 18408861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 402
Target Start/End: Original strand, 21639844 - 21639906
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| |||||||||||||||  ||||||||| |||||| | |||||||||||    
T  21639844 tctgggggagagagcagctctccaatccactataatgaaagtgttacaaa-gggttacaagaaa 21639906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 402
Target Start/End: Original strand, 21988918 - 21989006
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatac-aaatgagttacaagaaa 402  Q
    ||||| ||||||| ||||| ||||  ||||||||||||  || ||||||||||||||  |||||||||| ||| ||| |||||||||||||    
T  21988918 acccagttcggtccaatatgacctaatctggaggagag--caactctccaatccactttgatgaaagtgttacaaaaagagttacaagaaa 21989006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 236
Target Start/End: Complemental strand, 43864609 - 43864486
Alignment:
Q  112 gtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaa-ca 208  Q
    ||||||| ||||||||| |||||||||||  |||  |||||||||||||||||| ||||| |||| ||  ||||    |||  | ||||||||| || ||    
T  43864609 gtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagtaaaggaaagtggtaatcaatatca----aagtgaacacaagcaataatca 43864514  T
Q  209 ataataacaacacctagatctaatctag 236  Q
    | ||||||| ||||||||||||||||||    
T  43864513 acaataacagcacctagatctaatctag 43864486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 236
Target Start/End: Complemental strand, 1114021 - 1113895
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    |||||||||||  || ||||| |||||| ||||| | |  ||||||||||||| |||| ||||| ||||| |  ||||||| || ||    ||||||| |    
T  1114021 tgttgtgaattccgaatcaaaactcacatcaatacaaactatgatgtgtggagcaaaggaaagtggtaactaatatcaaagtaaaca----caagcaata 1113926  T
Q  206 acaataataacaacacctagatctaatctag 236  Q
    |||| ||||| ||||||||||||||||||||    
T  1113925 acaacaataataacacctagatctaatctag 1113895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 232
Target Start/End: Complemental strand, 29991382 - 29991299
Alignment:
Q  146 atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaa-caataataacaacacctagatctaat 232  Q
    ||||||||||||| ||||||||||||||||||  |||||||  ||    |||||| || || ||| ||||||||||||||||||||||    
T  29991382 atgatgtgtggagcaaagaaaagtagtaaccaatatcaaagtgag----cacaagtaataatcaacaataacaacacctagatctaat 29991299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 449
Target Start/End: Complemental strand, 3259083 - 3259009
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    |||| |||||||||||||||||| |||||||| |||   |||||||||||||| || | || ||||||||||||||    
T  3259083 aaagagatacaaatgagttacaataaattagcttaaacaagctcacaaagaac-aaccctagtttctacccatttt 3259009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 449
Target Start/End: Complemental strand, 25615937 - 25615867
Alignment:
Q  380 tgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    ||||||||||| |||||||||||||||| |||   ||| |||| ||||| |||| |||||||||||||||||    
T  25615937 tgatacaaatgggttacaagaaattagcttaaacaagcgcacatagaac-aaacctaatttctacccatttt 25615867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 31732768 - 31732839
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacacca--ataaataatgatgtgtggagtaaagaaaagtagtaacca 177  Q
    ||||||||||| ||||||||| |||||||||  | |||  ||||||||||||| |||  |||||||||||||    
T  31732768 tgttgtgaattcggactcaaaactcacaccagtacaaactatgatgtgtggagcaaatgaaagtagtaacca 31732839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 109 - 186
Target Start/End: Complemental strand, 48489798 - 48489720
Alignment:
Q  109 gttgtgaattgggactcaaatctcacaccaata--aataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaag 186  Q
    |||||||||| |||||||||  |||||||||||  ||  ||||||||||||| |||| |||||||||||||  |||||||    
T  48489798 gttgtgaattcggactcaaaa-tcacaccaataccaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaag 48489720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 4e-42; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 319 - 458
Target Start/End: Original strand, 14521690 - 14521828
Alignment:
Q  319 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctca 418  Q
    ||||||| ||||| |||| |||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  14521690 ttcggtccaatatgacctactctcgaggagagagcacctctccaattcaataagatgaaagtgatacaaatgagttacaa-aaattagcacaagagctca 14521788  T
Q  419 caaagaacaaaacttaatttctacccatttttcatctcac 458  Q
    ||||||||| ||| |||||||||| |||||||||| ||||    
T  14521789 caaagaacacaacctaatttctacacatttttcatgtcac 14521828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 327 - 450
Target Start/End: Complemental strand, 31077014 - 31076891
Alignment:
Q  327 aatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaac 426  Q
    ||||| |||| ||||  |||||| |||| ||||||||||||||||||| ||||||||||||||| ||||||| |||||||| |||||| |||||||||||    
T  31077014 aatatgacctactctctaggagatagcagctctccaatccactaagataaaagtgatacaaatgggttacaataaattagcttaagagttcacaaagaac 31076915  T
Q  427 aaaacttaatttctacccattttt 450  Q
    || || |||||| || ||||||||    
T  31076914 aagacctaatttttatccattttt 31076891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 313 - 449
Target Start/End: Complemental strand, 10077252 - 10077115
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||||||||||| ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||||| ||||||  ||||||||||||||||| ||      
T  10077252 acccaattcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaaaagttacaagaaattagcttata 10077153  T
Q  413 agctcac-aaagaacaaaacttaatttctacccatttt 449  Q
    |||| || ||||||||| || |||||||||||||||||    
T  10077152 agcttacaaaagaacaagacctaatttctacccatttt 10077115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 313 - 449
Target Start/End: Complemental strand, 5572328 - 5572191
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||||||||||| ||||| ||||  ||| | |||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  5572328 acccaattcggtccaatatgacctaatctaggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttata 5572229  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    |||| ||| |||||||| || |||||||||| ||||||    
T  5572228 agcttacacaagaacaagacctaatttctacgcatttt 5572191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 339 - 449
Target Start/End: Complemental strand, 21801405 - 21801294
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac-aaagaacaaaacttaatt 437  Q
    ||||| |||| ||||| ||||||||||||||||||| |||||| |||||| |||||||||||||||| | ||  |||| || ||||||||| ||||||||    
T  21801405 tctgggggagcgagcagctctccaatccactaagataaaagtgttacaaaagagttacaagaaattatcttataagcttacaaaagaacaagacttaatt 21801306  T
Q  438 tctacccatttt 449  Q
    ||||||||||||    
T  21801305 tctacccatttt 21801294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 313 - 450
Target Start/End: Original strand, 31979523 - 31979661
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| || |  ||||| |||||||||| | |||||||||||||||||||||||| | |||| |||||||||||||||| | ||      
T  31979523 acccagttcggtccaatatgacataatctgggggagagagcagccctccaatccactaagatgaaagtgttgcaaaagagttacaagaaattaacttata 31979622  T
Q  413 agctcac-aaagaacaaaacttaatttctacccattttt 450  Q
    |||| || ||||||||| || ||||||||||||||||||    
T  31979623 agcttacaaaagaacaagacctaatttctacccattttt 31979661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 345 - 449
Target Start/End: Complemental strand, 31086528 - 31086423
Alignment:
Q  345 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatttctacc 443  Q
    |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||| ||  |||| ||| |||| ||| || |||||||||||    
T  31086528 ggagagagcaactctccaatccactatgatgaaagtgttacaaaggagttacaagaaattagcttataagcttacacaagagcaagacctaatttctacc 31086429  T
Q  444 catttt 449  Q
    ||||||    
T  31086428 catttt 31086423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 320 - 449
Target Start/End: Original strand, 18232862 - 18232992
Alignment:
Q  320 tcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac 419  Q
    |||||| ||||| ||||  ||||| |||||||||| | ||||||| ||||| |||||||||| |||||| |||||||||||||| ||| ||  |||| ||    
T  18232862 tcggtccaatatgacctaatctgggggagagagcaaccctccaattcactatgatgaaagtgttacaaaagagttacaagaaatcagcttataagcttac 18232961  T
Q  420 a-aagaacaaaacttaatttctacccatttt 449  Q
    | |||||||| || |||||||||||||||||    
T  18232962 acaagaacaagacctaatttctacccatttt 18232992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 450
Target Start/End: Complemental strand, 24436061 - 24435920
Alignment:
Q  310 gtaacccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcat 409  Q
    |||||||| |||| || ||||| |||| |||| | |||||||||| | |||| |||||||| ||||||| || ||||||||| ||||||||||||||| |    
T  24436061 gtaacccagttcgatccaatatgacctactctaggggagagagcagccctccgatccactaggatgaaaatgttacaaatgaattacaagaaattagctt 24435962  T
Q  410 aagagctcac-aaagaacaaaacttaatttctacccattttt 450  Q
    |  |||| || ||| ||||| || ||||||||||||||||||    
T  24435961 ataagcttacaaaaaaacaagacctaatttctacccattttt 24435920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 313 - 448
Target Start/End: Complemental strand, 5757565 - 5757430
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| ||||||||||||| |||| |       
T  5757565 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaatagcttgca 5757467  T
Q  413 agctcaca-aagaacaaaacttaatttctacccattt 448  Q
    |||| | | |||||||| || ||||||||||||||||    
T  5757466 agcttatacaagaacaagacctaatttctacccattt 5757430  T

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Target: chr6; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 14521477 - 14521607
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaat-aaataatgatgtgtggagtaaagaaaagta----gtaaccacaatcaaagcaagcaatcacaagc 201  Q
    |||||||||||| ||||||||| ||||||||||| |||  ||||||||||||| |||||||||||    |||||||   |||||| || ||    |||||    
T  14521477 ttgttgtgaattcggactcaaaactcacaccaatgaaactatgatgtgtggagcaaagaaaagtacgtagtaaccaatttcaaagtaaaca----caagc 14521572  T
Q  202 aacaacaataataacaacacctagatctaatctag 236  Q
    ||||||||||| |||||||||||||||||||||||    
T  14521573 aacaacaataacaacaacacctagatctaatctag 14521607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 347 - 449
Target Start/End: Original strand, 4629998 - 4630101
Alignment:
Q  347 agagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac-aaagaacaaaacttaatttctaccca 445  Q
    |||||||| |||||||||||||||||||||||||| ||||||  ||||||||||||||| | ||  |||| || ||||||||| || ||||||||||| |    
T  4629998 agagagcagctctccaatccactaagatgaaagtgttacaaaatagttacaagaaattaacttataagcttacaaaagaacaagacctaatttctaccta 4630097  T
Q  446 tttt 449  Q
    ||||    
T  4630098 tttt 4630101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 320 - 450
Target Start/End: Original strand, 27165700 - 27165831
Alignment:
Q  320 tcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa-ttagcataagagctca 418  Q
    |||||| ||||| |||| || ||| ||| |||| | | |||||||| |||||||||||||||||||||  | ||||||| ||| |||||||||||||| |    
T  27165700 tcggtccaatatgacctactatgggggacagagtagccctccaatcaactaagatgaaagtgatacaacggggttacaaaaaaattagcataagagctta 27165799  T
Q  419 caaagaacaaaacttaatttctacccattttt 450  Q
     | ||||||||||| |||||||| ||||||||    
T  27165800 tagagaacaaaactgaatttctatccattttt 27165831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 313 - 402
Target Start/End: Original strand, 21356046 - 21356134
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| ||||||| ||||| ||||  |||||||||||||||| ||||||||||||||| |||||||||| ||| || |||||||||||||    
T  21356046 acccagttcggtccaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttactaa-gagttacaagaaa 21356134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 345 - 450
Target Start/End: Original strand, 22963741 - 22963846
Alignment:
Q  345 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctaccc 444  Q
    |||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||  | || ||| | |||||  | ||||||||||||    
T  22963741 ggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataaccttacacaaaacaagccgtaatttctaccc 22963840  T
Q  445 attttt 450  Q
    ||||||    
T  22963841 attttt 22963846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 345 - 450
Target Start/End: Complemental strand, 23824652 - 23824547
Alignment:
Q  345 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctaccc 444  Q
    |||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||  | || ||| | |||||  | ||||||||||||    
T  23824652 ggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataaccttacacaaaacaagccgtaatttctaccc 23824553  T
Q  445 attttt 450  Q
    ||||||    
T  23824552 attttt 23824547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 232
Target Start/End: Original strand, 3038766 - 3038849
Alignment:
Q  146 atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatctaat 232  Q
    ||||||||| ||| |||| |||||| ||||||  |||||||||| |||   |||| |||||||||||||||||||||||||||||||    
T  3038766 atgatgtgtcgagcaaaggaaagtaataaccaatatcaaagcaaacaa---caagtaacaacaataataacaacacctagatctaat 3038849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 452
Target Start/End: Complemental strand, 1115159 - 1115052
Alignment:
Q  345 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctaccc 444  Q
    ||||||||||  |||||||||||||| ||| | | ||||||||||  |||||||||||| | | ||| |||||| ||| |||||| | ||||||||| ||    
T  1115159 ggagagagcagatctccaatccactatgataagaatgatacaaataggttacaagaaatcaacttaaaagctcaaaaataacaaaccctaatttctatcc 1115060  T
Q  445 atttttca 452  Q
    ||||||||    
T  1115059 atttttca 1115052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 449
Target Start/End: Complemental strand, 16569106 - 16569047
Alignment:
Q  392 gttacaagaaattagcataag--agctcacaaagaacaaaacttaatttctacccatttt 449  Q
    |||||||||||||||| |||   ||||||||||||||||||| |||||||||||||||||    
T  16569106 gttacaagaaattagcttaaacaagctcacaaagaacaaaacctaatttctacccatttt 16569047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 33160236 - 33160276
Alignment:
Q  196 acaagcaacaacaataataacaacacctagatctaatctag 236  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  33160236 acaagcaacaacaatattaacaacacctagatctaatctag 33160276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 391 - 450
Target Start/End: Original strand, 99244 - 99303
Alignment:
Q  391 agttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccattttt 450  Q
    ||||||||||||||||| ||  |||||||| ||||||||  |||||||||||||||||||    
T  99244 agttacaagaaattagcttagaagctcacagagaacaaactttaatttctacccattttt 99303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 452
Target Start/End: Complemental strand, 30518165 - 30518076
Alignment:
Q  363 atccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccatttttca 452  Q
    |||||||| ||| | |||||||||||   |||||| |||| || | ||| || |||||||||||||| ||||||||||||| ||||||||    
T  30518165 atccactatgataagagtgatacaaagaggttacatgaaactaacttaaaagttcacaaagaacaaaccttaatttctacctatttttca 30518076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 387
Target Start/End: Original strand, 22709054 - 22709102
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaa 387  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  22709054 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 22709102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 387
Target Start/End: Original strand, 31936603 - 31936671
Alignment:
Q  319 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaa 387  Q
    ||||||| ||||| ||||  |||||  ||||||||| |||||||||||||||| ||||||||| |||||    
T  31936603 ttcggtccaatatgacctagtctgggagagagagcagctctccaatccactaatatgaaagtgttacaa 31936671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 177
Target Start/End: Original strand, 5406042 - 5406073
Alignment:
Q  146 atgatgtgtggagtaaagaaaagtagtaacca 177  Q
    ||||||||||||||||||||||||||||||||    
T  5406042 atgatgtgtggagtaaagaaaagtagtaacca 5406073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 177
Target Start/End: Original strand, 5410367 - 5410398
Alignment:
Q  146 atgatgtgtggagtaaagaaaagtagtaacca 177  Q
    ||||||||||||||||||||||||||||||||    
T  5410367 atgatgtgtggagtaaagaaaagtagtaacca 5410398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 402
Target Start/End: Complemental strand, 5674831 - 5674769
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  5674831 tctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 5674769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 449
Target Start/End: Original strand, 28137494 - 28137562
Alignment:
Q  382 atacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    ||||||||| |||||||||||||||| |||   |||||||||||||| || | |||||||||||||||||    
T  28137494 atacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttctacccatttt 28137562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 33211074 - 33211115
Alignment:
Q  195 cacaagcaacaacaataataacaacacctagatctaatctag 236  Q
    ||||||||| ||||| ||||| ||||||||||||||||||||    
T  33211074 cacaagcaataacaacaataataacacctagatctaatctag 33211115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 451
Target Start/End: Original strand, 22424917 - 22424983
Alignment:
Q  386 aaatgagttacaagaaattagcataag--agctcacaaagaacaaaacttaatttctacccatttttc 451  Q
    ||||| |||||||||||||||| |||   ||||||||||||||||  || ||||||||||||||||||    
T  22424917 aaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccct-aatttctacccatttttc 22424983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 1e-39; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 311 - 450
Target Start/End: Complemental strand, 17345607 - 17345469
Alignment:
Q  311 taacccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcata 410  Q
    ||||||| ||||||||||||| |||| |||||| ||| |||| | |||||||||||||||||||||| ||| |||||||| | |||||||||||||||||    
T  17345607 taacccagttcggtctaatatgacctactctgg-ggaaagaggagctctccaatccactaagatgaacgtggtacaaatgtgctacaagaaattagcata 17345509  T
Q  411 agagctcacaaagaacaaaacttaatttctacccattttt 450  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  17345508 agagcccacaaagaacaaaacctaatttctacccattttt 17345469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 313 - 449
Target Start/End: Original strand, 19072938 - 19073075
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||| ||      
T  19072938 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaagaaattagcttata 19073037  T
Q  413 agctcac-aaagaacaaaacttaatttctacccatttt 449  Q
    |||| || ||||||||| || |||||||||||||||||    
T  19073038 agcttacaaaagaacaatacctaatttctacccatttt 19073075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 313 - 449
Target Start/End: Original strand, 19120828 - 19120965
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||| ||      
T  19120828 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaagaaattagcttata 19120927  T
Q  413 agctcac-aaagaacaaaacttaatttctacccatttt 449  Q
    |||| || ||||||||| || |||||||||||||||||    
T  19120928 agcttacaaaagaacaatacctaatttctacccatttt 19120965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 310 - 452
Target Start/End: Original strand, 22819435 - 22819578
Alignment:
Q  310 gtaacccaattcggtctaatataacctcctctggagg-agagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagca 408  Q
    ||||||||||| |||| ||||| |||| |||||| || |||||| | | ||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  22819435 gtaacccaatttggtccaatatgacctactctggggggagagagtagccctccaatccaccaagatgaaagtgatacaaatgagttacaagaaattagct 22819534  T
Q  409 taagagctcacaaagaacaaaacttaatttctacccatttttca 452  Q
    |   ||||||||||||| || || ||||||||| ||||||||||    
T  22819535 ttttagctcacaaagaataagacataatttctaaccatttttca 22819578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 356 - 452
Target Start/End: Complemental strand, 9023883 - 9023787
Alignment:
Q  356 ctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccatttttca 452  Q
    ||||||||||||||||||||||||||||||||||| | ||||| |||||||||||| ||||||||||||| || || ||||||||||||| ||||||    
T  9023883 ctctccaatccactaagatgaaagtgatacaaatgggatacaataaattagcataaaagctcacaaagaataagacctaatttctacccacttttca 9023787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 313 - 449
Target Start/End: Complemental strand, 47704023 - 47703886
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| || ||||||||||||||| ||      
T  47704023 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagaattacaagaaattagcttaca 47703924  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  47703923 agcttacacaagaacaagacctaatttctacccatttt 47703886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 319 - 449
Target Start/End: Complemental strand, 16124597 - 16124466
Alignment:
Q  319 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctca 418  Q
    ||||||| ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||  |||| |    
T  16124597 ttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagctta 16124498  T
Q  419 ca-aagaacaaaacttaatttctacccatttt 449  Q
    || |||||||| || |||||||||||||||||    
T  16124497 cataagaacaagacctaatttctacccatttt 16124466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 108 - 236
Target Start/End: Original strand, 13137780 - 13137906
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaata--aataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    |||||| |||| ||||||||| ||||||||||||  ||| ||||||||||||| |||| |||||||||||||   |||||| || ||    |||||||||    
T  13137780 tgttgtaaattcggactcaaaactcacaccaatacaaattatgatgtgtggagcaaaggaaagtagtaaccaatttcaaagtaaaca----caagcaaca 13137875  T
Q  206 acaataataacaacacctagatctaatctag 236  Q
    |||||||||||||||||||||||||||||||    
T  13137876 acaataataacaacacctagatctaatctag 13137906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 319 - 407
Target Start/End: Complemental strand, 27104453 - 27104365
Alignment:
Q  319 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagc 407  Q
    ||||||| ||||||||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| ||||||||||||||||||    
T  27104453 ttcggtccaatataacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagc 27104365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 313 - 449
Target Start/End: Original strand, 13598408 - 13598545
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | || |||||||||| |||||||||| |||||| ||| |||||||||||||| ||      
T  13598408 acccagttcggtccaatatgacctaatctgggggagagagcagcccttcaatccactatgatgaaagtgttacaaaagagatacaagaaattagcttata 13598507  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    |||| ||| |||||||| ||||||||||||| ||||||    
T  13598508 agcttacacaagaacaagacttaatttctactcatttt 13598545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 313 - 449
Target Start/End: Original strand, 29651821 - 29651958
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||||| |||||| || ||||||||||||| | ||      
T  29651821 acccagttcggtccaatatgacctaatctgggggagagagcagcactccaatccactatgatgaaagtgttacaaaagaattacaagaaattaacttata 29651920  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  29651921 agcttacacaagaacaagacctaatttctacccatttt 29651958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 108 - 236
Target Start/End: Original strand, 45644158 - 45644284
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    ||||||||||| |||||||||  |||||| |||| | |  ||||||||||||| |||| |||||||||||||  |||||||||| |||   |||||||||    
T  45644158 tgttgtgaattcggactcaaaa-tcacacaaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagcaaacaa---caagcaaca 45644253  T
Q  206 acaataataacaacacctagatctaatctag 236  Q
    ||||||||||||||| |||||||||||||||    
T  45644254 acaataataacaacatctagatctaatctag 45644284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 313 - 449
Target Start/End: Complemental strand, 47098911 - 47098775
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| |||   ||||| |||||||||| | |||||||||||||||||||||||| ||| ||||||||||||||||||||| ||      
T  47098911 acccagttcggtccaatatgaccgaatctgggggagagagcagccctccaatccactaagatgaaagtgttac-aatgagttacaagaaattagcttata 47098813  T
Q  413 agctcac-aaagaacaaaacttaatttctacccatttt 449  Q
    |||| || |||||||||  | |||||||||||||||||    
T  47098812 agcttacaaaagaacaagtcctaatttctacccatttt 47098775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 28223220 - 28223347
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    |||||||||||| ||||||||| |||| ||||||| | |  ||||||||||||| |||  |||||||||||||  |||||||  | ||    ||||||||    
T  28223220 ttgttgtgaattcggactcaaaactcagaccaatacaaactatgatgtgtggagcaaacgaaagtagtaaccaatatcaaagtgaaca----caagcaac 28223315  T
Q  205 aacaataataacaacacctagatctaatctag 236  Q
    ||||||||||||||||||||||||||||||||    
T  28223316 aacaataataacaacacctagatctaatctag 28223347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 313 - 449
Target Start/End: Original strand, 9476271 - 9476408
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||| | |||||||||| ||||||||||||||| |||||||||  |||||| |||||| ||||||||||| ||      
T  9476271 acccagttcggtccaatatgacctaatctaggggagagagcagctctccaatccactatgatgaaagtattacaaaagagttataagaaattagcttaca 9476370  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    |||| ||| |||||||| || ||||||||| |||||||    
T  9476371 agcttacacaagaacaagacctaatttctatccatttt 9476408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 313 - 448
Target Start/End: Original strand, 3281718 - 3281853
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||| | |||||||||| |||||| ||||||||||||| |||| |       
T  3281718 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccacgatgatgaaagtgttacaaa-gagttacaagaaaatagcttgca 3281816  T
Q  413 agctcaca-aagaacaaaacttaatttctacccattt 448  Q
    |||| ||| |||||||| || ||||||||||||||||    
T  3281817 agcttacacaagaacaagacctaatttctacccattt 3281853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 313 - 448
Target Start/End: Complemental strand, 26644984 - 26644849
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| |||||||||||| || |||||||||| |||||| ||||||||||||| |||| |       
T  26644984 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccattatgatgaaagtgttacaaa-gagttacaagaaaatagcttgca 26644886  T
Q  413 agctcaca-aagaacaaaacttaatttctacccattt 448  Q
    |||| ||| |||||||| || ||||||||||||||||    
T  26644885 agcttacacaagaacaagacctaatttctacccattt 26644849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 28220025 - 28220152
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    |||||||||||| ||||||||| |||||||||||| | |  ||||||||||||  |||||||| |||||||||  || ||||  | ||    ||| ||||    
T  28220025 ttgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggaacaaagaaaattagtaaccaatattaaagtgaaca----caaacaac 28220120  T
Q  205 aacaataataacaacacctagatctaatctag 236  Q
    ||||||||||||||||||||||||||||||||    
T  28220121 aacaataataacaacacctagatctaatctag 28220152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 381 - 452
Target Start/End: Complemental strand, 35109556 - 35109485
Alignment:
Q  381 gatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccatttttca 452  Q
    |||||||||  |||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||    
T  35109556 gatacaaataggttacaagaaattagcttaaaagctcacaaagaacaaaccttaatttctacccaattttca 35109485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 108 - 236
Target Start/End: Original strand, 196710 - 196835
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaata--aataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    ||||||||||| | |||||||| |||||||||||  ||| ||||||||||||| |||| ||| |||||||||  |||||||  | ||    |||||||||    
T  196710 tgttgtgaattcgtactcaaat-tcacaccaatacaaattatgatgtgtggagcaaaggaaaatagtaaccaatatcaaagtgaaca----caagcaaca 196804  T
Q  206 acaataataacaacacctagatctaatctag 236  Q
    ||||||||||||||||||| |||||||||||    
T  196805 acaataataacaacacctacatctaatctag 196835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 108 - 236
Target Start/End: Complemental strand, 1833876 - 1833751
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    ||||||||||| |||||||| | ||||||||||| | |  ||||| |||||||||||| ||||| |||||||   |||||| || ||    |||||||||    
T  1833876 tgttgtgaattcggactcaa-tatcacaccaatacaaactatgatctgtggagtaaaggaaagtcgtaaccaatttcaaagtaaaca----caagcaaca 1833782  T
Q  206 acaataataacaacacctagatctaatctag 236  Q
    |||||||||||||||||||||||||||||||    
T  1833781 acaataataacaacacctagatctaatctag 1833751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 319 - 458
Target Start/End: Original strand, 32889455 - 32889595
Alignment:
Q  319 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaag-aaattagcataagagctc 417  Q
    ||||||| ||||| ||||  ||||| ||| |||||| |||||||||||||||||||||||||| ||| ||||||||||||| ||| |||| |   ||||     
T  32889455 ttcggtccaatatgacctagtctgggggatagagcagctctccaatccactaagatgaaagtgttac-aatgagttacaagaaaaatagcttgcaagctt 32889553  T
Q  418 aca-aagaacaaaacttaatttctacccatttttcatctcac 458  Q
    ||| ||||||||  | ||||||||||||||||||||| ||||    
T  32889554 acacaagaacaagtcctaatttctacccatttttcatatcac 32889595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 146 - 236
Target Start/End: Original strand, 50167019 - 50167105
Alignment:
Q  146 atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatctaatctag 236  Q
    ||||||||||||| |||| |||||||||||||  ||||    ||| || |||||| |||||||||||||||||||||||||||||||||||    
T  50167019 atgatgtgtggagcaaaggaaagtagtaaccaatatca----aagtaaacacaagaaacaacaataataacaacacctagatctaatctag 50167105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 30476247 - 30476371
Alignment:
Q  109 gttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaa 206  Q
    |||||||||| | ||||||| |||||||||||| | |  || ||||||||||||||| |||||||||||||   |||||| || ||    ||||||||||    
T  30476247 gttgtgaattcgaactcaaaactcacaccaatacaaactataatgtgtggagtaaaggaaagtagtaaccaatttcaaagtaaaca----caagcaacaa 30476342  T
Q  207 caataataacaacacctagatctaatcta 235  Q
    ||||||||||||||| |||| ||||||||    
T  30476343 caataataacaacacttagacctaatcta 30476371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 313 - 388
Target Start/End: Original strand, 775682 - 775757
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaa 388  Q
    ||||||||||||| ||||| ||||  ||||| |||||||| | |||||||||||||||||||||||||| ||||||    
T  775682 acccaattcggtccaatatgacctaatctgggggagagagtagctctccaatccactaagatgaaagtgttacaaa 775757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 4552447 - 4552574
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    |||||| ||||| |||||||||| ||||||||||| | |  |||||| ||| ||||||| |||||||||||||   |||||| || ||    |||| |||    
T  4552447 ttgttgcgaattcggactcaaatttcacaccaatacaaactatgatgcgtgaagtaaaggaaagtagtaaccaatttcaaagtaaaca----caagtaac 4552542  T
Q  205 aacaataataacaacacctagatctaatctag 236  Q
    ||||||||||||||||| ||||||||||||||    
T  4552543 aacaataataacaacacatagatctaatctag 4552574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 107 - 232
Target Start/End: Original strand, 23555070 - 23555192
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaata--aataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    |||||||||||| |||||||||  || ||||||||  || |||||||||||||| ||||||||||||||| ||   |||||| || ||    ||||||||    
T  23555070 ttgttgtgaattcggactcaaaa-tcgcaccaatagaaacaatgatgtgtggagcaaagaaaagtagtaatcaatgtcaaagtaaaca----caagcaac 23555164  T
Q  205 aacaataataacaacacctagatctaat 232  Q
    ||||| ||||||||||||||||||||||    
T  23555165 aacaacaataacaacacctagatctaat 23555192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 452
Target Start/End: Complemental strand, 918538 - 918428
Alignment:
Q  342 ggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttcta 441  Q
    ||||||||||| | |||||||| |||||| ||| | |||||||||||    ||||||||||||| | ||  | ||||||||||||||| | |||||||||    
T  918538 ggaggagagagaaactctccaaaccactatgataagagtgatacaaagatattacaagaaattatcttacaaactcacaaagaacaaaccataatttcta 918439  T
Q  442 cccatttttca 452  Q
    |||||||||||    
T  918438 cccatttttca 918428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 452
Target Start/End: Complemental strand, 11032378 - 11032268
Alignment:
Q  342 ggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttcta 441  Q
    |||||| |||||| || ||  |||||||| ||| | ||||||| |||   |||||||||||||||  ||| | ||||||||||||||||| |||||||||    
T  11032378 ggaggatagagcaactatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacataatttcta 11032279  T
Q  442 cccatttttca 452  Q
    |||||||||||    
T  11032278 cccatttttca 11032268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 444
Target Start/End: Complemental strand, 21536630 - 21536525
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatt 437  Q
    ||||| |||||||||| |||||||||||||||  ||||||||| |||||| ||||||||||||| |||| |   |||| ||| |||||||| ||||||||    
T  21536630 tctgggggagagagcagctctccaatccactataatgaaagtgttacaaa-gagttacaagaaaatagcttgcaagcttacacaagaacaatacttaatt 21536532  T
Q  438 tctaccc 444  Q
    |||||||    
T  21536531 tctaccc 21536525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 234
Target Start/End: Original strand, 833970 - 834093
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    ||||||||||| |||||||||  ||||||||||| | |  ||||||||||||| |||| |||||||||||||  ||||    ||| || ||||||||| |    
T  833970 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatca----aagtaaacacaagcaata 834064  T
Q  206 acaataataacaacacctagatctaatct 234  Q
    |||| |||||||||||| |||||||||||    
T  834065 acaacaataacaacaccaagatctaatct 834093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 8550867 - 8550941
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    |||| ||||||||||||||||||||||||||| |||   |||||||||||||| |||| |||||||||||||||||    
T  8550867 aaagggatacaaatgagttacaagaaattagcttaaacaagctcacaaagaac-aaacctaatttctacccatttt 8550941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 45644434 - 45644509
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcat--aagagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    |||| |||||||||||||| |||||||||||| |  |  ||||||||||||||||||||||||||||| |||||||    
T  45644434 aaagagatacaaatgagttgcaagaaattagctttgacaagctcacaaagaacaaaacttaatttctatccatttt 45644509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 452
Target Start/End: Complemental strand, 32737063 - 32736944
Alignment:
Q  333 acctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaact 432  Q
    |||| ||||||  ||||||| | |||||  ||| |||| |||||| ||||||||||   ||||||| |||||||| ||| || ||| |||||||||| |     
T  32737063 acctactctgggagagagagaaactctctgatcaactatgatgaaggtgatacaaagaggttacaaaaaattagcttaaaagttcataaagaacaaaccc 32736964  T
Q  433 taatttctacccatttttca 452  Q
    ||||||||||||||||||||    
T  32736963 taatttctacccatttttca 32736944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 232
Target Start/End: Original strand, 40122000 - 40122122
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    |||||||||||| |||||||||  ||||||||||| | |  |||||| |||||| |||| |||||||||||||  ||| |||  | ||    ||||||||    
T  40122000 ttgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgcgtggagcaaaggaaagtagtaaccaatatctaagtgaaca----caagcaac 40122094  T
Q  205 aacaataataacaacacctagatctaat 232  Q
    ||||||||||||||||||||||||||||    
T  40122095 aacaataataacaacacctagatctaat 40122122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 46065195 - 46065156
Alignment:
Q  196 acaagcaacaacaataataacaacacctagatctaatcta 235  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  46065195 acaagcaacaacaataataacaacacctagatctaatcta 46065156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 108 - 236
Target Start/End: Original strand, 28265359 - 28265484
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    ||||| ||||| |||||||||  ||||||||||| | |  |||||||||||||||||| ||| ||||| |||  |||||||  | ||    |||||||||    
T  28265359 tgttgggaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagtaaaggaaaatagtagccaatatcaaagtgaaca----caagcaaca 28265453  T
Q  206 acaataataacaacacctagatctaatctag 236  Q
    ||||||||||||||| |||||||||||||||    
T  28265454 acaataataacaacatctagatctaatctag 28265484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 376 - 451
Target Start/End: Original strand, 40122278 - 40122354
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttttc 451  Q
    |||||||||||||||||||| ||||||||||| |||   ||||||||||||||||| | ||||||| |||||||||||    
T  40122278 aaagtgatacaaatgagttataagaaattagcttaaacaagctcacaaagaacaaatc-taatttcgacccatttttc 40122354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 107 - 236
Target Start/End: Complemental strand, 41361279 - 41361153
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaat-aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    |||||||||||| ||||||||| |||  |||||| |||  ||||||||||||| |||| |||||| ||| ||  ||||    ||| || |||||| ||||    
T  41361279 ttgttgtgaattcggactcaaaactctaaccaataaaactatgatgtgtggagcaaaggaaagtattaatcaatatca----aagtaaacacaagtaaca 41361184  T
Q  206 acaataataacaacacctagatctaatctag 236  Q
    |||| |||||||||||||| |||||||||||    
T  41361183 acaacaataacaacacctatatctaatctag 41361153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 8550583 - 8550710
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    |||||||||||| |||||||||  ||||||||||| | |  ||||||||||||| |||| |||||||||||||  ||||    |||  | |||||||||     
T  8550583 ttgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatca----aagtgaacacaagcaat 8550677  T
Q  205 aa-caataataacaacacctagatctaatctag 236  Q
    || ||| ||||||||||||||||||||||||||    
T  8550678 aatcaacaataacaacacctagatctaatctag 8550710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 405
Target Start/End: Complemental strand, 47102928 - 47102837
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaatta 405  Q
    ||||| ||||||| ||||| ||||  ||| | |||||||||| |  |||||||||||||||||||| || ||| |||||||||||||||||||    
T  47102928 acccagttcggtccaatatgacctaatctaggggagagagcagccatccaatccactaagatgaaaatgttac-aatgagttacaagaaatta 47102837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 402
Target Start/End: Complemental strand, 24202830 - 24202768
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  24202830 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 24202768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 236
Target Start/End: Complemental strand, 31659607 - 31659480
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaataaataat--gatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    |||||||||||| |||||||||  ||||||||||| | |||  ||||||||||| ||||||||||||||||||  ||||||  | |  | |||||||||     
T  31659607 ttgttgtgaattcggactcaaaa-tcacaccaatataaaatatgatgtgtggagaaaagaaaagtagtaaccaatatcaaa--atg--aacacaagcaat 31659513  T
Q  205 aa-caataataacaacacctagatctaatctag 236  Q
    || ||| ||||||||||||| ||||||||||||    
T  31659512 aatcaacaataacaacaccttgatctaatctag 31659480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 370 - 448
Target Start/End: Complemental strand, 40816844 - 40816765
Alignment:
Q  370 aagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac-aaagaacaaaacttaatttctacccattt 448  Q
    |||||||||||| |||||| |||||||||||||||||| ||  |||| || ||||||||| || |||||||||| |||||    
T  40816844 aagatgaaagtgttacaaaagagttacaagaaattagcttataagcttacaaaagaacaagacctaatttctactcattt 40816765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 357 - 440
Target Start/End: Complemental strand, 48382524 - 48382441
Alignment:
Q  357 tctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttct 440  Q
    ||||||||||| || ||||||||||||||||||  |||||||||||||| | ||  || ||||||||| |||| | ||||||||    
T  48382524 tctccaatccaatatgatgaaagtgatacaaataggttacaagaaattaacttacaagttcacaaagatcaaaccctaatttct 48382441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 232
Target Start/End: Original strand, 3846960 - 3847045
Alignment:
Q  146 atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatctaat 232  Q
    |||||||||||||||||| |||||||||||||  |||||||  | ||    ||| |||||| |||||||||||||||||||||||||    
T  3846960 atgatgtgtggagtaaaggaaagtagtaaccaatatcaaagtgaacacaagcaa-caacaataataataacaacacctagatctaat 3847045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 452
Target Start/End: Original strand, 10997031 - 10997105
Alignment:
Q  378 agtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccatttttca 452  Q
    ||||||||||||  |||||||||||||| | ||| || | ||||| |||||| | ||||||||||||||||||||    
T  10997031 agtgatacaaatatgttacaagaaattaacttaaaagataacaaataacaaaccctaatttctacccatttttca 10997105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 186
Target Start/End: Original strand, 37559663 - 37559744
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacacca--ataaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaag 186  Q
    |||||||||||| ||||||||| |||||||||  |||||  ||||||| ||||| |||| |||||||||||||  |||||||    
T  37559663 ttgttgtgaattcggactcaaaactcacaccaatataaactatgatgtctggagcaaaggaaagtagtaaccaatatcaaag 37559744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 402
Target Start/End: Complemental strand, 13604678 - 13604622
Alignment:
Q  345 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    |||||||||| ||||||||||||||| ||||||| || |||||| |||||||||||||    
T  13604678 ggagagagcagctctccaatccactatgatgaaaatgttacaaa-gagttacaagaaa 13604622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 402
Target Start/End: Complemental strand, 19358898 - 19358842
Alignment:
Q  345 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  19358898 ggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 19358842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 402
Target Start/End: Complemental strand, 19361487 - 19361431
Alignment:
Q  345 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  19361487 ggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 19361431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 402
Target Start/End: Complemental strand, 19380127 - 19380071
Alignment:
Q  345 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  19380127 ggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 19380071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 50169099 - 50169140
Alignment:
Q  195 cacaagcaacaacaataataacaacacctagatctaatctag 236  Q
    ||||| |||||||||||||||||||||||| |||||||||||    
T  50169099 cacaaacaacaacaataataacaacacctatatctaatctag 50169140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 927785 - 927862
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaataaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaag 186  Q
    ||||||||||| |||||||||  ||||| |||||||  ||||||||||||||||||  |||| |||||||  |||||||    
T  927785 tgttgtgaattcggactcaaaa-tcacatcaataaactatgatgtgtggagtaaagggaagtggtaaccaatatcaaag 927862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 202 - 236
Target Start/End: Complemental strand, 3189607 - 3189573
Alignment:
Q  202 aacaacaataataacaacacctagatctaatctag 236  Q
    |||||||||||||| ||||||||||||||||||||    
T  3189607 aacaacaataataataacacctagatctaatctag 3189573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 202 - 236
Target Start/End: Complemental strand, 3198424 - 3198390
Alignment:
Q  202 aacaacaataataacaacacctagatctaatctag 236  Q
    |||||||||||||| ||||||||||||||||||||    
T  3198424 aacaacaataataataacacctagatctaatctag 3198390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 202 - 236
Target Start/End: Complemental strand, 3207263 - 3207229
Alignment:
Q  202 aacaacaataataacaacacctagatctaatctag 236  Q
    |||||||||||||| ||||||||||||||||||||    
T  3207263 aacaacaataataataacacctagatctaatctag 3207229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 429
Target Start/End: Original strand, 8281378 - 8281444
Alignment:
Q  363 atccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaa 429  Q
    |||||||| ||| | | ||||||||||  |||||||||||||| |||||  ||||||||||||||||    
T  8281378 atccactatgataagaatgatacaaatatgttacaagaaattaacataatcgctcacaaagaacaaa 8281444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 196988 - 197062
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    |||| ||||||||||||||||||||||||| | |||   |||||||||||||| || | ||||||||||| |||||    
T  196988 aaagggatacaaatgagttacaagaaattaacttaaacaagctcacaaagaac-aaccctaatttctaccaatttt 197062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 834247 - 834321
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    |||| |||||||||| |||||||||||||||| |||   |||||||||||||| || | ||||||||| |||||||    
T  834247 aaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttctatccatttt 834321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 234
Target Start/End: Complemental strand, 16455897 - 16455861
Alignment:
Q  198 aagcaacaacaataataacaacacctagatctaatct 234  Q
    |||||||||||||||||||||||  ||||||||||||    
T  16455897 aagcaacaacaataataacaacatatagatctaatct 16455861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 429
Target Start/End: Complemental strand, 46065006 - 46064951
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcat--aagagctcacaaagaacaaa 429  Q
    |||| |||||| |||||||||||||||||||| |  | ||||||||||||||||||    
T  46065006 aaagagatacacatgagttacaagaaattagcttcaacgagctcacaaagaacaaa 46064951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 4e-36; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 310 - 449
Target Start/End: Complemental strand, 11181923 - 11181782
Alignment:
Q  310 gtaacccaattcggtctaatataacctcctct-ggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagca 408  Q
    |||||| | ||||||||||||| |||| |||| || |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  11181923 gtaacctagttcggtctaatatgacctactctagggggagagagcaaccctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcc 11181824  T
Q  409 taagagctcacaaa-gaacaaaacttaatttctacccatttt 449  Q
    ||| ||||| |||| |||||| || |||||||||||||||||    
T  11181823 taaaagctctcaaatgaacaagacctaatttctacccatttt 11181782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 33031021 - 33030888
Alignment:
Q  319 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctca 418  Q
    ||||||| ||||| || | |||||| |||||||||| ||||||||| |||||||||||||||||| |||  | |||||||||||||||| ||| ||||||    
T  33031021 ttcggtcaaatatgacatactctgggggagagagcagctctccaattcactaagatgaaagtgatgcaatggggttacaagaaattagcttaaaagctca 33030922  T
Q  419 caaagaacaaaacttaatttctacccatttttca 452  Q
    ||||||||||||| ||||||||||||||||||||    
T  33030921 caaagaacaaaacataatttctacccatttttca 33030888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 313 - 449
Target Start/End: Original strand, 10281761 - 10281898
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  10281761 acccagttcggtccaatatgacctgatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttaca 10281860  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  10281861 agcttacacaagaacaagacctaatttctacccatttt 10281898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 338 - 452
Target Start/End: Original strand, 6741887 - 6742001
Alignment:
Q  338 ctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatt 437  Q
    |||||| ||| |||||| |||||||||||| ||||||| ||||||||||||  ||||||||||||||||| |   | ||||||||||||||||| |||||    
T  6741887 ctctgggggatagagcagctctccaatccattaagatggaagtgatacaaagaagttacaagaaattagcttgcaaactcacaaagaacaaaacctaatt 6741986  T
Q  438 tctacccatttttca 452  Q
    ||||| |||||||||    
T  6741987 tctactcatttttca 6742001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 108 - 236
Target Start/End: Original strand, 28750455 - 28750581
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaata--aataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    ||||||||||| ||||||||| ||||||||||||  ||| ||||||||||||| |||| |||||||||||||   | |||| || ||    |||||||||    
T  28750455 tgttgtgaatttggactcaaaactcacaccaatacaaattatgatgtgtggagcaaaggaaagtagtaaccaattttaaagtaaaca----caagcaaca 28750550  T
Q  206 acaataataacaacacctagatctaatctag 236  Q
    |||||||||||||||||||||||||||||||    
T  28750551 acaataataacaacacctagatctaatctag 28750581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 313 - 458
Target Start/End: Complemental strand, 42127497 - 42127352
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| |||| |||||||| ||||  ||||| |||||||||| | | |||||||||||||||||||||| ||| ||||||||||||||||||||| ||      
T  42127497 acccagttcgatctaatatgacctaatctgggggagagagcagccccccaatccactaagatgaaagtgttac-aatgagttacaagaaattagcttata 42127399  T
Q  413 agctcac-aaagaacaaaacttaatttctacccatttttcatctcac 458  Q
    |||| || |||||||||  | || |||||||||||||||||| ||||    
T  42127398 agcttacaaaagaacaagtcctactttctacccatttttcatatcac 42127352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 345 - 442
Target Start/End: Complemental strand, 7160958 - 7160861
Alignment:
Q  345 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctac 442  Q
    ||||||| || |||||||||||||| |||||||||||||||||| | ||||||| |||||||  | | |||||||||||||||| |||||||||||||    
T  7160958 ggagagatcagctctccaatccactcagatgaaagtgatacaaaggggttacaaaaaattagatttaaagctcacaaagaacaagacttaatttctac 7160861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 347 - 449
Target Start/End: Original strand, 3880343 - 3880446
Alignment:
Q  347 agagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatttctaccca 445  Q
    |||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||  ||  |||| ||| |||||||| || |||||||||||||    
T  3880343 agagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagtttacaagcttacacaagaacaagacctaatttctaccca 3880442  T
Q  446 tttt 449  Q
    ||||    
T  3880443 tttt 3880446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 319 - 458
Target Start/End: Original strand, 28832275 - 28832412
Alignment:
Q  319 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctca 418  Q
    ||||||| ||||| ||||  ||||| |||||||||| | |||||||||||||||||||||||| ||| ||||||||||||||||||||| ||  ||  ||    
T  28832275 ttcggtccaatatgacctaatctgggggagagagcagccctccaatccactaagatgaaagtgttac-aatgagttacaagaaattagcttataagtaca 28832373  T
Q  419 caaagaacaaaacttaatttctacccatttttcatctcac 458  Q
     |||||||||    ||||||||||||||||||||| ||||    
T  28832374 -aaagaacaagttctaatttctacccatttttcatatcac 28832412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 347 - 448
Target Start/End: Complemental strand, 12084228 - 12084127
Alignment:
Q  347 agagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatttctaccca 445  Q
    |||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||| | ||| |||| ||| |||||||| || |||||||||||||    
T  12084228 agagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaattaacttaaaagcttacacaagaacaagacctaatttctaccca 12084130  T
Q  446 ttt 448  Q
    |||    
T  12084129 ttt 12084127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 2630247 - 2630380
Alignment:
Q  319 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctca 418  Q
    ||||||| ||||| |||| || ||  ||||| |||| |||| |||||||||| ||||||||||||||||| | ||||||| |||||||| ||| | | ||    
T  2630247 ttcggtccaatatgacctgctttgagggagatagcagctcttcaatccactatgatgaaagtgatacaaaagggttacaataaattagcttaaaaacaca 2630346  T
Q  419 caaagaacaaaacttaatttctacccatttttca 452  Q
    ||||||||||||| |||||| ||  |||||||||    
T  2630347 caaagaacaaaacctaatttttatacatttttca 2630380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 108 - 236
Target Start/End: Complemental strand, 13488569 - 13488443
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    ||||||||||| |||||||||||||||||||||  |||  |||||||||||||||||| |||||| ||||||   |||    |||  | ||||| ||| |    
T  13488569 tgttgtgaattcggactcaaatctcacaccaatacaaaatatgatgtgtggagtaaaggaaagtaataaccaatttca----aagtgaacacaatcaata 13488474  T
Q  206 acaataataacaacacctagatctaatctag 236  Q
     ||||||||||||||||||||||||||||||    
T  13488473 gcaataataacaacacctagatctaatctag 13488443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 313 - 402
Target Start/End: Complemental strand, 9353419 - 9353331
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||    
T  9353419 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaa 9353331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 313 - 449
Target Start/End: Complemental strand, 11917059 - 11916922
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  | ||| |||||||||| |||||||||||||||  ||||||||| |||||| ||||||||||||| |||  |       
T  11917059 acccagttcggtccaatatgacctaatatgggggagagagcagctctccaatccactataatgaaagtgttacaaaagagttacaagaaaatagtttgca 11916960  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  11916959 agcttacacaagaacaagacctaatttctacccatttt 11916922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 345 - 449
Target Start/End: Original strand, 19588788 - 19588893
Alignment:
Q  345 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatttctacc 443  Q
    |||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||| | ||  |||| ||| |||||||| || |||||||||||    
T  19588788 ggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattaccttataagcttacacaagaacaagacctaatttctacc 19588887  T
Q  444 catttt 449  Q
    | ||||    
T  19588888 cttttt 19588893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 313 - 402
Target Start/End: Complemental strand, 36932437 - 36932349
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||    
T  36932437 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaa 36932349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 236
Target Start/End: Complemental strand, 538387 - 538263
Alignment:
Q  110 ttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaac 207  Q
    |||||||||  |||||||| |||||||||||| | |  ||||||||||||| |||| |||||| ||||||   |||||| || ||    |||||||||||    
T  538387 ttgtgaattcagactcaaaactcacaccaatataaactatgatgtgtggagcaaaggaaagtaataaccaatttcaaagtaaaca----caagcaacaac 538292  T
Q  208 aataataacaacacctagatctaatctag 236  Q
    ||||||||||||| |||||||||||||||    
T  538291 aataataacaacatctagatctaatctag 538263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 448
Target Start/End: Complemental strand, 17004047 - 17003911
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| |||| |||||||||| |||||||||  | |||| ||||||||| |||||| | ||      
T  17004047 acccagttcggtccaatatgacctaatctgggggagagagcagctcttcaatccactatgatgaaagtatttcaaaagagttacaaaaaattaacttaca 17003948  T
Q  413 agctcaca-aagaacaaaacttaatttctacccattt 448  Q
    |||| ||| |||||||| || ||||||||||||||||    
T  17003947 agcttacacaagaacaagacctaatttctacccattt 17003911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 236
Target Start/End: Original strand, 42428244 - 42428356
Alignment:
Q  122 actcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaac 219  Q
    ||||||| |||||||||||| | |  ||||||||||||| |||| |||||||||||||  |||||||  | ||    |||||||||| ||||||||||||    
T  42428244 actcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaaca----caagcaacaataataataacaac 42428339  T
Q  220 acctagatctaatctag 236  Q
    |||||||||||||||||    
T  42428340 acctagatctaatctag 42428356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 5887234 - 5887360
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    |||||||||||| |||||||||  ||||||||||| | |  ||||| ||||||| |||| |||||||||||||  |||||||  | ||    ||||||||    
T  5887234 ttgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatatgtggagcaaaggaaagtagtaaccaatatcaaagtgaaca----caagcaac 5887328  T
Q  205 aacaataataacaacacctagatctaatctag 236  Q
    |||||||||||||||||||| |||||||||||    
T  5887329 aacaataataacaacacctaaatctaatctag 5887360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 42426034 - 42426161
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    |||||||||||| | ||||||| ||||||| |||| | |  ||||||||||||| |||  |||||||||||||  |||||||  | ||    ||||||||    
T  42426034 ttgttgtgaattcgaactcaaaactcacacaaatacaaactatgatgtgtggagcaaaagaaagtagtaaccaatatcaaagtgaaca----caagcaac 42426129  T
Q  205 aacaataataacaacacctagatctaatctag 236  Q
    | ||||||||||||||||||||||||||||||    
T  42426130 atcaataataacaacacctagatctaatctag 42426161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 105 - 236
Target Start/End: Original strand, 30682719 - 30682849
Alignment:
Q  105 agttgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagca 202  Q
    |||||||||||||  ||||||||| |||||||||||  |||  ||||||||||||| |||| |||||||||||||  ||||    |||  | ||||||||    
T  30682719 agttgttgtgaatacggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatca----aagtgaacacaagca 30682814  T
Q  203 acaa-caataataacaacacctagatctaatctag 236  Q
    | || ||| ||||||||||||||||||||||||||    
T  30682815 ataatcaacaataacaacacctagatctaatctag 30682849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 236
Target Start/End: Complemental strand, 31183342 - 31183216
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    |||||||||||| |||||||||  ||||||||||| | |  ||||||||||||| |||| ||||||||||| |  |||||||   | || ||||||||||    
T  31183342 ttgttgtgaattcggactcaaaa-tcacaccaatacaaaccatgatgtgtggagcaaaggaaagtagtaactaatatcaaag---ggaa-cacaagcaac 31183248  T
Q  205 aacaataataacaacacctagatctaatctag 236  Q
    || ||||||||||||||||| |||||||||||    
T  31183247 aaaaataataacaacacctatatctaatctag 31183216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 146 - 236
Target Start/End: Complemental strand, 13240080 - 13239994
Alignment:
Q  146 atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatctaatctag 236  Q
    |||||||||||||||||| |||||||||||||   | |||| || ||    ||||||||||||| ||||||||||||||||||||||||||    
T  13240080 atgatgtgtggagtaaaggaaagtagtaaccaattttaaagtaaaca----caagcaacaacaacaataacaacacctagatctaatctag 13239994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 402
Target Start/End: Original strand, 15464542 - 15464630
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| ||||||| ||||| | ||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||    
T  15464542 acccagttcggtccaatatgatctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaa 15464630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 448
Target Start/End: Original strand, 14520240 - 14520375
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||| | || ||||||| |||| |||||||||| |||||||||| |||||| ||||||||||||| |||| |       
T  14520240 acccagttcggtccaatatgacctaatctaggggggagagcagctcttcaatccactatgatgaaagtgttacaaa-gagttacaagaaaatagcttgca 14520338  T
Q  413 agctcaca-aagaacaaaacttaatttctacccattt 448  Q
    |||| ||| |||||||| || ||||||||||||||||    
T  14520339 agcttacacaagaacaagacctaatttctacccattt 14520375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 110 - 236
Target Start/End: Complemental strand, 32637190 - 32637066
Alignment:
Q  110 ttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaac 207  Q
    ||||||||| ||| ||||| |||||||||||| | |  |||||||||||||||||| ||||||||||| |   ||| |  || ||    ||||||||| |    
T  32637190 ttgtgaattcggattcaaaactcacaccaatacaaactatgatgtgtggagtaaaggaaagtagtaacaaatttcacactaaaca----caagcaacatc 32637095  T
Q  208 aataataacaacacctagatctaatctag 236  Q
    |||||||||||||||||||||||||||||    
T  32637094 aataataacaacacctagatctaatctag 32637066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 224
Target Start/End: Complemental strand, 534128 - 534013
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    |||||||||||| ||||||||| |||||||||||  |||  ||||||||||||| |||| |||||||||||||   |||    ||| |  ||||||||||    
T  534128 ttgttgtgaattcggactcaaaactcacaccaatagaaactatgatgtgtggagcaaaggaaagtagtaaccaatttca----aagtagacacaagcaac 534033  T
Q  205 aacaataataacaacaccta 224  Q
    || |||||||||||||||||    
T  534032 aataataataacaacaccta 534013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 376 - 451
Target Start/End: Complemental strand, 33831768 - 33831692
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttttc 451  Q
    |||| |||||||||| |||||||||||||||| |||   |||||||||||||| |||| |||||||||||||||||||    
T  33831768 aaagagatacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaacctaatttctacccatttttc 33831692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 146 - 236
Target Start/End: Original strand, 16649674 - 16649760
Alignment:
Q  146 atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatctaatctag 236  Q
    ||||||||||||| |||| |||||||||||||||||||    |||  | |||||| |  | ||||||||||||||||||||||||||||||    
T  16649674 atgatgtgtggagcaaaggaaagtagtaaccacaatca----aagtgaacacaagtagtagcaataataacaacacctagatctaatctag 16649760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 37439425 - 37439384
Alignment:
Q  195 cacaagcaacaacaataataacaacacctagatctaatctag 236  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  37439425 cacaagcaacaacaataataacaacacctaggtctaatctag 37439384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 42927176 - 42927135
Alignment:
Q  195 cacaagcaacaacaataataacaacacctagatctaatctag 236  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  42927176 cacaagcaacaacaacaataacaacacctagatctaatctag 42927135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 402
Target Start/End: Original strand, 38192209 - 38192271
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  38192209 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 38192271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 402
Target Start/End: Original strand, 38219434 - 38219496
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  38219434 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 38219496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 407
Target Start/End: Complemental strand, 24553561 - 24553501
Alignment:
Q  345 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagc 407  Q
    |||||||||| | ||||| |||||||||||||||||| ||| |||||||||||||||||||||    
T  24553561 ggagagagcagc-ctccactccactaagatgaaagtgttac-aatgagttacaagaaattagc 24553501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 402
Target Start/End: Complemental strand, 31300683 - 31300595
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| ||||||| ||||| ||||  ||||  |||||||| | |||||||||||||||||||||||||| ||  |||||||| |||||||    
T  31300683 acccagttcggtccaatatgacctagtctgagggagagagaaactctccaatccactaagatgaaagtgtta-taatgagttgcaagaaa 31300595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 5887496 - 5887570
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    ||||||||||||||| ||| |||||||||||| |||   ||||||||||||||||| | ||||||||| |||||||    
T  5887496 aaagtgatacaaatgggttgcaagaaattagcttaaacaagctcacaaagaacaaatc-taatttctatccatttt 5887570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 236
Target Start/End: Original strand, 8565841 - 8565876
Alignment:
Q  201 caacaacaataataacaacacctagatctaatctag 236  Q
    |||||| |||||||||||||||||||||||||||||    
T  8565841 caacaataataataacaacacctagatctaatctag 8565876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 449
Target Start/End: Original strand, 8566031 - 8566100
Alignment:
Q  381 gatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    |||||||||| |||||||||||||||| |||   |||||||||||||| |||| ||| |||||||||||||    
T  8566031 gatacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaacctaagttctacccatttt 8566100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 402
Target Start/End: Original strand, 24135884 - 24135946
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| || |||||| |||||||||||||||| |||||| | |||||||||||    
T  24135884 tctgggggagagagcagctatccaatgcactaagatgaaagtgttacaaa-gggttacaagaaa 24135946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 389
Target Start/End: Original strand, 28537669 - 28537712
Alignment:
Q  346 gagagagcacctctccaatccactaagatgaaagtgatacaaat 389  Q
    ||||||||| ||||||||||||||||||| ||||||||| ||||    
T  28537669 gagagagcagctctccaatccactaagataaaagtgatataaat 28537712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 240
Target Start/End: Original strand, 39468348 - 39468479
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    ||||||||||| | ||||||| || ||||||||| | |  ||||||||||||| |||| |||||||||||||  ||||    |||  | ||||| ||| |    
T  39468348 tgttgtgaattcgaactcaaaacttacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatca----aagtgaacacaaacaata 39468443  T
Q  206 a-caataataacaacacctagatctaatctagaaat 240  Q
    | ||| ||||||| ||||||||||||||||||||||    
T  39468444 atcaacaataacagcacctagatctaatctagaaat 39468479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 186
Target Start/End: Original strand, 3075548 - 3075629
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaag 186  Q
    |||||||||||| ||||| ||| |||||||||||  |||  ||||||||||||| |||| |||||| ||||||  |||||||    
T  3075548 ttgttgtgaattcggactaaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtaataaccaatatcaaag 3075629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 236
Target Start/End: Complemental strand, 33832007 - 33831921
Alignment:
Q  146 atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatctaatctag 236  Q
    ||||||||||||| |||| ||||||||||||| |||||    |||  | ||||||||| ||||| |||| || |||||| |||||||||||    
T  33832007 atgatgtgtggagcaaaggaaagtagtaaccaaaatca----aagtgaacacaagcaataacaacaatagcagcacctaaatctaatctag 33831921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 416 - 452
Target Start/End: Original strand, 3651613 - 3651649
Alignment:
Q  416 tcacaaagaacaaaacttaatttctacccatttttca 452  Q
    |||||||||||||| | ||||||||||||||||||||    
T  3651613 tcacaaagaacaaaccctaatttctacccatttttca 3651649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 9e-31; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 310 - 449
Target Start/End: Complemental strand, 39774395 - 39774255
Alignment:
Q  310 gtaacccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcat 409  Q
    ||||| || ||||||| ||||| |||| |||||| ||| |||||| |||||||||||||||| |||||||||||||||||  |||||||||||||||| |    
T  39774395 gtaactcagttcggtccaatatgacctactctgggggatagagcagctctccaatccactaaaatgaaagtgatacaaataggttacaagaaattagctt 39774296  T
Q  410 aagagctcacaaag-aacaaaacttaatttctacccatttt 449  Q
    || ||||||||||| ||||| || ||||||||||| |||||    
T  39774295 aaaagctcacaaagaaacaagacctaatttctaccaatttt 39774255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 310 - 441
Target Start/End: Complemental strand, 1983390 - 1983259
Alignment:
Q  310 gtaacccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcat 409  Q
    |||||||| ||||||| ||||| |||| || ||| ||||| |||| ||||||||||||||| ||| ||||||||||||| | |||||||||||||||| |    
T  1983390 gtaacccagttcggtccaatatgacctactatgggggagatagcagctctccaatccactaggatcaaagtgatacaaaggggttacaagaaattagctt 1983291  T
Q  410 aagagctcacaaagaacaaaacttaatttcta 441  Q
       ||||||||||||||||||| |||||||||    
T  1983290 gcaagctcacaaagaacaaaacataatttcta 1983259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 328 - 449
Target Start/End: Original strand, 18377384 - 18377506
Alignment:
Q  328 atataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaag-aac 426  Q
    |||| |||| ||||||||||||||||| | ||||| ||||||||||||||||||||||||||| |||| ||||||| ||| ||| ||||||||||| |||    
T  18377384 atatgacctactctggaggagagagcagccctccattccactaagatgaaagtgatacaaatgggttataagaaatcagcttaaaagctcacaaagaaac 18377483  T
Q  427 aaaacttaatttctacccatttt 449  Q
    ||  | |||||||||||||||||    
T  18377484 aagccctaatttctacccatttt 18377506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 313 - 449
Target Start/End: Original strand, 10047389 - 10047526
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  10047389 acccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttata 10047488  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  10047489 agcttacacaagaacaagacctaatttctacccatttt 10047526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 313 - 449
Target Start/End: Complemental strand, 16623380 - 16623243
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||  ||||| ||||  |||||||||||||||| ||||||||||||||| |||||||||| |||||| ||||||||||||||||||  |      
T  16623380 acccagttcggttcaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagctaata 16623281  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  16623280 agcttacagaagaacaagacctaatttctacccatttt 16623243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 346 - 452
Target Start/End: Original strand, 37781905 - 37782011
Alignment:
Q  346 gagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctaccca 445  Q
    ||||||| | |||||||||||||||  || |||||||||||||   |||||||||||||||| ||| | ||||||||||||||| |||||||||||||||    
T  37781905 gagagagtaactctccaatccactataataaaagtgatacaaagaggttacaagaaattagcttaaaaactcacaaagaacaaatcttaatttctaccca 37782004  T
Q  446 tttttca 452  Q
    |||||||    
T  37782005 tttttca 37782011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 313 - 448
Target Start/End: Complemental strand, 36315316 - 36315181
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  36315316 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaattagcttaga 36315218  T
Q  413 agctcaca-aagaacaaaacttaatttctacccattt 448  Q
    |||| ||| |||| ||| || ||||||||||||||||    
T  36315217 agcttacacaagagcaagacctaatttctacccattt 36315181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 313 - 448
Target Start/End: Complemental strand, 36329525 - 36329390
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  36329525 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaattagcttaga 36329427  T
Q  413 agctcaca-aagaacaaaacttaatttctacccattt 448  Q
    |||| ||| |||| ||| || ||||||||||||||||    
T  36329426 agcttacacaagagcaagacctaatttctacccattt 36329390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 310 - 450
Target Start/End: Original strand, 5112244 - 5112384
Alignment:
Q  310 gtaacccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcat 409  Q
    |||||||| ||||||| ||||| | || || ||| || ||||||| |||||||||||||||| ||||||||| |||||||| |||||||||||||||| |    
T  5112244 gtaacccagttcggtccaatatgatctactttgggggtgagagcagctctccaatccactaatatgaaagtgttacaaatgggttacaagaaattagctt 5112343  T
Q  410 aagagctcacaaagaacaaaacttaatttctacccattttt 450  Q
    || | |||| ||| ||| | || |||||| |||| ||||||    
T  5112344 aaaaactcataaaaaacgagacctaatttgtacctattttt 5112384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 313 - 448
Target Start/End: Complemental strand, 5396758 - 5396623
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  |||||||||||||||| ||||||||||||||| |||||||||| | |||| ||||||||||||| |||| |       
T  5396758 acccagttcggtccaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttgcaaa-gagttacaagaaaatagcttgca 5396660  T
Q  413 agctcaca-aagaacaaaacttaatttctacccattt 448  Q
    |||| ||| |||||||| || ||||||||||||||||    
T  5396659 agcttacacaagaacaagacctaatttctacccattt 5396623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 108 - 236
Target Start/End: Original strand, 26175436 - 26175562
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    ||||||||||| ||||||||| |||||||||||  |||  ||||||||||||| |||| |||||||||||||   |||    ||| || ||||||||| |    
T  26175436 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatttca----aagtaaacacaagcaata 26175531  T
Q  206 acaataataacaacacctagatctaatctag 236  Q
     ||||||||||||||||||||||||||||||    
T  26175532 gcaataataacaacacctagatctaatctag 26175562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 449
Target Start/End: Complemental strand, 3796574 - 3796469
Alignment:
Q  345 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatttctacc 443  Q
    |||||||||| ||||| ||||||||| |||||||||| |||||| |||||||||||||||||| ||  ||||  || |||||||| || |||||||||||    
T  3796574 ggagagagcaactctctaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagcttgcacaagaacaagacctaatttctacc 3796475  T
Q  444 catttt 449  Q
    ||||||    
T  3796474 catttt 3796469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 313 - 449
Target Start/End: Complemental strand, 38152526 - 38152389
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| || |  ||||| |||||||||| ||||||||||||||| | |||||||| |||||| |||||| ||||||||||| ||      
T  38152526 acccagttcggtccaatatgacataatctgggggagagagcagctctccaatccactatggtgaaagtgttacaaaagagttataagaaattagcttata 38152427  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    |||| ||| |||||||| || ||||||||||| |||||    
T  38152426 agcttacacaagaacaagacctaatttctaccaatttt 38152389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 107 - 236
Target Start/End: Complemental strand, 5872184 - 5872060
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaataaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaa 206  Q
    |||||||||||  |||||||||  ||||||||||| | | |||||||||||| |||| |||||||||||||  |||||||  | ||    ||| ||||||    
T  5872184 ttgttgtgaatccggactcaaaa-tcacaccaatacaaactgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaaca----caaacaacaa 5872090  T
Q  207 caataataacaacacctagatctaatctag 236  Q
    ||||||||||||||||||||||||||||||    
T  5872089 caataataacaacacctagatctaatctag 5872060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 339 - 407
Target Start/End: Complemental strand, 16630741 - 16630673
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagc 407  Q
    ||||||||||||| || ||||||||||||||| |||||||||| |||||| ||||||||||||||||||    
T  16630741 tctggaggagagaacagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagc 16630673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 346 - 449
Target Start/End: Complemental strand, 42599626 - 42599523
Alignment:
Q  346 gagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac-aaagaacaaaacttaatttctaccc 444  Q
    ||||||||| | ||||||||||||||||||||| || ||| ||||||||||||||||||||| ||  |||| || ||||||||| || ||||||||||||    
T  42599626 gagagagcaaccctccaatccactaagatgaaaatgttac-aatgagttacaagaaattagcttataagcttacaaaagaacaagacctaatttctaccc 42599528  T
Q  445 atttt 449  Q
    |||||    
T  42599527 atttt 42599523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 401
Target Start/End: Complemental strand, 34495885 - 34495822
Alignment:
Q  338 ctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaa 401  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||    
T  34495885 ctctgggggagagagcagccctccaatccactaagatgaaagtgatacaaatgggttacaagaa 34495822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 46147194 - 46147321
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    ||||||||||||  | |||||| |||||||||||  |||  ||||||||||||| |||| |||||||||||||  |||||||  | ||    ||||||||    
T  46147194 ttgttgtgaattccgcctcaaaactcacaccaatgcaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaaca----caagcaac 46147289  T
Q  205 aacaataataacaacacctagatctaatctag 236  Q
    |||||||||||||| |||||||||||||||||    
T  46147290 aacaataataacaatacctagatctaatctag 46147321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 407
Target Start/End: Original strand, 3777559 - 3777652
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagc 407  Q
    ||||| ||||||| ||||||||||  ||| |||||||||| | ||||||||||||||| |||||||||| |||||| ||||||||||||| ||||    
T  3777559 acccagttcggtccaatataacctaatctagaggagagagtagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaatagc 3777652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 108 - 232
Target Start/End: Original strand, 36463196 - 36463317
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    ||||||||||| |||||||||  |||||| |||| | |  |||||||||||||||||| |||||| ||||||  ||||    ||| || |||||||||||    
T  36463196 tgttgtgaattcggactcaaaa-tcacactaatacaaactatgatgtgtggagtaaaggaaagtaataaccaatatca----aagtaaacacaagcaaca 36463290  T
Q  206 acaataataacaacacctagatctaat 232  Q
    |||||||||||||||||||||||||||    
T  36463291 acaataataacaacacctagatctaat 36463317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 403
Target Start/End: Original strand, 39246004 - 39246094
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaat 403  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||||| |||||| ||||||||||||||    
T  39246004 acccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaat 39246094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 107 - 228
Target Start/End: Original strand, 45686986 - 45687105
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    ||||||||||||  ||||||||  ||||||||||| | |  ||||||| ||||| |||| |||||||||||||  |||||||||| |||   ||||||||    
T  45686986 ttgttgtgaattcagactcaaaa-tcacaccaatacaaactatgatgtatggagcaaaggaaagtagtaaccaatatcaaagcaaacaa---caagcaac 45687081  T
Q  205 aacaataataacaacacctagatc 228  Q
    ||||||||||||||||||||||||    
T  45687082 aacaataataacaacacctagatc 45687105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 449
Target Start/End: Complemental strand, 6743470 - 6743366
Alignment:
Q  345 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac-aaagaacaaaacttaatttctacc 443  Q
    |||||||||| | ||||||||||||| |||||||||| |||||| ||| ||||| |||||||| | | |||| || ||||||||| || |||||||||||    
T  6743470 ggagagagcagccctccaatccactatgatgaaagtgttacaaaagagctacaaaaaattagc-ttatagcttacaaaagaacaagacctaatttctacc 6743372  T
Q  444 catttt 449  Q
    ||||||    
T  6743371 catttt 6743366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 12743727 - 12743851
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    |||||||||||| ||||||||| |||||||||||  |||  ||| ||||||||| |||| |||||||||||||   |||    ||| || ||||||   |    
T  12743727 ttgttgtgaattcggactcaaaactcacaccaatacaaactatgttgtgtggagcaaaggaaagtagtaaccaatttca----aagtaaacacaag---c 12743819  T
Q  205 aacaataataacaacacctagatctaatctag 236  Q
    ||||||||||||||||||||||||||||||||    
T  12743820 aacaataataacaacacctagatctaatctag 12743851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 319 - 449
Target Start/End: Original strand, 24333825 - 24333957
Alignment:
Q  319 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagct-- 416  Q
    ||||||| ||||| ||||  | ||| |||||||||| ||||||||||||||| |||||| ||| |||||| |||||| || |||||||| ||  ||||      
T  24333825 ttcggtccaatatgacctaatttgggggagagagcagctctccaatccactatgatgaacgtgttacaaaagagttataaaaaattagcttacaagctta 24333924  T
Q  417 cacaaagaacaaaacttaatttctacccatttt 449  Q
    |||||  || ||||| |||||||||||||||||    
T  24333925 cacaagaaaaaaaacctaatttctacccatttt 24333957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 36994802 - 36994761
Alignment:
Q  195 cacaagcaacaacaataataacaacacctagatctaatctag 236  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  36994802 cacaagcaacaacaataataacaacacctagatctaatctag 36994761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 392 - 452
Target Start/End: Complemental strand, 34670673 - 34670613
Alignment:
Q  392 gttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccatttttca 452  Q
    |||||||||||||||| ||| ||||||||||||||||| | ||||||||| ||||||||||    
T  34670673 gttacaagaaattagcttaatagctcacaaagaacaaatcataatttctatccatttttca 34670613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 108 - 233
Target Start/End: Original strand, 48893443 - 48893565
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    ||||||||||| |||||||||  ||||||||||| | |  ||||||||||||| |||| |||||||||||||  ||||    ||| || ||||||||| |    
T  48893443 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatca----aagtaaacacaagcaata 48893537  T
Q  206 acaataataacaacacctagatctaatc 233  Q
    |||| ||||||| |||||||||||||||    
T  48893538 acaacaataacagcacctagatctaatc 48893565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 5350269 - 5350199
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaataaataatgatgtgtggagtaaagaaaagtagtaacca 177  Q
    |||||||||||| ||||||||||||||||||||||||    | |||||| ||||||| |||||||||||||    
T  5350269 ttgttgtgaattcggactcaaatctcacaccaataaacttaggtgtgtgaagtaaaggaaagtagtaacca 5350199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 107 - 233
Target Start/End: Original strand, 12739352 - 12739473
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    |||||||||||| ||||||||| |||||||||||  |||  |||||||||||||||||  |||||||||||||   |||    ||| || ||||||   |    
T  12739352 ttgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagtaaaagaaagtagtaaccaatttca----aagtaaacacaag---c 12739444  T
Q  205 aacaataataacaacacctagatctaatc 233  Q
    || ||||||||||||||||||||||||||    
T  12739445 aataataataacaacacctagatctaatc 12739473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 108 - 241
Target Start/End: Complemental strand, 31474512 - 31474384
Alignment:
Q  108 tgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 205  Q
    ||||||||||| ||||||||   ||||||||||  ||| ||||||||||| || |||  |||||||||| ||  ||||    ||| || ||||| |||||    
T  31474512 tgttgtgaattcggactcaa---tcacaccaatacaaacaatgatgtgtgtagcaaatgaaagtagtaatcaatatca----aagtaaacacaaacaaca 31474420  T
Q  206 acaataataacaacacctagatctaatctagaaatt 241  Q
    |||| |||||||||||||||||||||||||| ||||    
T  31474419 acaacaataacaacacctagatctaatctaggaatt 31474384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 402
Target Start/End: Complemental strand, 31985720 - 31985633
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  31985720 acccagttcggtccaatatgacctaatctgg-ggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 31985633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 105 - 236
Target Start/End: Original strand, 47038213 - 47038341
Alignment:
Q  105 agttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagca 202  Q
    ||||| |||||||| |||||||||  ||||||||||| | |  ||||||||||||  |||| |||||||||||||  ||||    ||| || ||||| ||    
T  47038213 agttgctgtgaatttggactcaaaa-tcacaccaatacaaactatgatgtgtggaacaaaggaaagtagtaaccaatatca----aagtaaacacaaaca 47038307  T
Q  203 acaacaataataacaacacctagatctaatctag 236  Q
    | ||||| ||||||||||||||||||||||||||    
T  47038308 ataacaacaataacaacacctagatctaatctag 47038341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 449
Target Start/End: Original strand, 54867194 - 54867330
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | || ||||| |||| ||||||| || ||||||  ||||| ||||||||||| ||      
T  54867194 acccagttcggtccaatatgacctagtctgg-ggagagagcagcccttcaatcaactatgatgaaaatgttacaaaatagttataagaaattagcttata 54867292  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  54867293 agcttacacaagaacaatacctaatttctacccatttt 54867330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 387
Target Start/End: Complemental strand, 28468590 - 28468542
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaa 387  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||    
T  28468590 tctggaggagagagcagctctccaatccactatgatgaaagtgttacaa 28468542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 381 - 449
Target Start/End: Original strand, 45687267 - 45687337
Alignment:
Q  381 gatacaaatgagttacaagaaattagcat--aagagctcacaaagaacaaaacttaatttctacccatttt 449  Q
    ||||||||||||||| ||||||||||| |  |  ||||||||||||||||||| |||||||| ||||||||    
T  45687267 gatacaaatgagttataagaaattagctttgacaagctcacaaagaacaaaacctaatttcttcccatttt 45687337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 212
Target Start/End: Complemental strand, 4588321 - 4588218
Alignment:
Q  107 ttgttgtgaattgggactcaaat-ctcacaccaataa-ataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    |||||||||||| |||||||||  ||||||||||||| |   |||||||||||| |||| ||| |||||||||| ||||    |||||||||||| ||||    
T  4588321 ttgttgtgaattcggactcaaaaactcacaccaataatactttgatgtgtggagcaaaggaaaatagtaaccactatca----aagcaatcacaaacaac 4588226  T
Q  205 aacaataa 212  Q
    ||||||||    
T  4588225 aacaataa 4588218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 451
Target Start/End: Complemental strand, 5871908 - 5871832
Alignment:
Q  376 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttttc 451  Q
    ||||||||| ||||| ||||||||||||| || |||   |||||||||||||| |||| |||||||||||||||||||    
T  5871908 aaagtgataaaaatgggttacaagaaatttgcttaaacaagctcacaaagaac-aaacctaatttctacccatttttc 5871832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 449
Target Start/End: Original strand, 5147687 - 5147824
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  | ||| |||| ||||| ||||||| |||| || |||||||||| ||||||  |||||||||||| |||| |       
T  5147687 acccagttcggtccaatatgacctaatttgggggagggagcagctctccagtccattatgatgaaagtgttacaaaatagttacaagaaaatagcttgca 5147786  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    |||| ||| ||||||||  | |||||||||||||||||    
T  5147787 agcttacacaagaacaaggcctaatttctacccatttt 5147824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 29254777 - 29254736
Alignment:
Q  195 cacaagcaacaacaataataacaacacctagatctaatctag 236  Q
    ||||| |||| |||||||||||||||||||||||||||||||    
T  29254777 cacaaacaacgacaataataacaacacctagatctaatctag 29254736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 451
Target Start/End: Complemental strand, 873571 - 873467
Alignment:
Q  347 agagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccat 446  Q
    |||||||| |||||| |||||||| ||| | | |||||| |||  |||||||||||||| | ||| ||||| |||| |||||| | |||||||||| |||    
T  873571 agagagcaactctccgatccactatgattagaatgataccaataggttacaagaaattaacttaaaagctcgcaaataacaaatcctaatttctactcat 873472  T
Q  447 ttttc 451  Q
     ||||    
T  873471 atttc 873467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 387
Target Start/End: Complemental strand, 5269272 - 5269204
Alignment:
Q  319 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaa 387  Q
    ||||||| ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||||| |||||    
T  5269272 ttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaa 5269204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 9927257 - 9927385
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacacca--ataaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 204  Q
    |||||||||||| ||||||||| ||| |||||  |||||  ||||||||||||| |||| |||||||| ||||  ||||    ||| || |||||||||     
T  9927257 ttgttgtgaattcggactcaaaactcgcaccaatataaactatgatgtgtggagcaaaggaaagtagttaccaatatca----aagtaaacacaagcaat 9927352  T
Q  205 aa-caataataacaacacctagatctaatctag 236  Q
    || ||| ||||||| ||||||||| ||||||||    
T  9927353 aatcaacaataacagcacctagatttaatctag 9927385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 53345544 - 53345480
Alignment:
Q  110 ttgtgaattgggactcaaatctcacaccaataaataatgatgtgtggagtaaagaaaagtagtaa 174  Q
    |||||||||  || ||||||||||||||||||||    |||||||||||||||||||| ||||||    
T  53345544 ttgtgaattcagattcaaatctcacaccaataaacttagatgtgtggagtaaagaaaaatagtaa 53345480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 241
Target Start/End: Original strand, 6542027 - 6542114
Alignment:
Q  147 tgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatctaatctagaaatt 241  Q
    |||||||||||| |||| |||||| ||||||  ||||||| ||    |||||||||||||||||||   ||| ||||||||||||||||| ||||    
T  6542027 tgatgtgtggagcaaaggaaagtaataaccaatatcaaagtaa----tcacaagcaacaacaataa---caaaacctagatctaatctaggaatt 6542114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 402
Target Start/End: Original strand, 24741976 - 24742038
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  24741976 tctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 24742038  T

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Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 402
Target Start/End: Original strand, 29760677 - 29760739
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  29760677 tctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 29760739  T

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Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 186
Target Start/End: Original strand, 52082462 - 52082542
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaata--aataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaag 186  Q
    |||||||||||| |||||||||  |||||||||||  ||| ||||||||||||  |||| |||||||||||||  |||||||    
T  52082462 ttgttgtgaattcggactcaaaa-tcacaccaatacaaattatgatgtgtggaacaaaggaaagtagtaaccaatatcaaag 52082542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 452
Target Start/End: Complemental strand, 18912407 - 18912311
Alignment:
Q  356 ctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccatttttca 452  Q
    ||||||||||||||| ||| | |||||||||||   | |||||||||||||  ||  | ||||||||||||||| | ||| || || ||||||||||    
T  18912407 ctctccaatccactatgataagagtgatacaaaaaggatacaagaaattagtttacaaactcacaaagaacaaaccctaaattatatccatttttca 18912311  T

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Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 406
Target Start/End: Original strand, 39593764 - 39593831
Alignment:
Q  338 ctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattag 406  Q
    |||||| |||||||| | ||||||| | ||||| ||| | |||||||||||| ||||||||||||||||    
T  39593764 ctctgggggagagag-atctctccacttcactatgataagagtgatacaaataagttacaagaaattag 39593831  T

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Target: scaffold0148 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 313 - 406
Target Start/End: Original strand, 10739 - 10832
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattag 406  Q
    ||||| ||||||| ||||| ||||  | ||| |||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  10739 acccagttcggtccaatatgacctaatttgggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaagaaattag 10832  T

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Target: scaffold0006 (Bit Score: 54; Significance: 8e-22; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 313 - 449
Target Start/End: Original strand, 5693 - 5830
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | || |||||||||| |||||||||| |||||| ||| |||||||||||||| ||      
T  5693 acccagttcggtccaatatgacctaatctgggggagagagcagcccttcaatccactatgatgaaagtgttacaaaagagatacaagaaattagcttata 5792  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    |||| ||| |||||||| ||||||||||||| ||||||    
T  5793 agcttacacaagaacaagacttaatttctactcatttt 5830  T

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Target: scaffold0006; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 449
Target Start/End: Original strand, 2502 - 2639
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| |||| || ||||| ||||  ||||| ||||| |||| | ||||||||||||| |||||||||| |||||| || ||| ||||||||||| ||      
T  2502 acccagttcgctccaatatgacctaatctgggggagacagcagccctccaatccactatgatgaaagtgttacaaaagaattataagaaattagcttata 2601  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    |||| ||| |||||||| |  |||||||||||||||||    
T  2602 agcttacacaagaacaagaactaatttctacccatttt 2639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 402
Target Start/End: Complemental strand, 133335 - 133279
Alignment:
Q  345 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    |||||||||| ||||||||||||||| ||||||| || |||||| |||||||||||||    
T  133335 ggagagagcagctctccaatccactatgatgaaaatgttacaaa-gagttacaagaaa 133279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 313 - 449
Target Start/End: Original strand, 85693 - 85829
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||| ||| ||||| ||||  ||||| |||||||||  ||||||||||||| | |||||||||| |||||| |||||||||||||||||| |||     
T  85693 acccagttcagtccaatatgacctaatctgggggagagagcggctctccaatccaccatgatgaaagtgttacaaa-gagttacaagaaattagcttaaa 85791  T
Q  413 agctcaca-aagaacaaaacttaatttctacccatttt 449  Q
    |||| ||| |||| ||| || |||||||||||||||||    
T  85792 agcttacacaagagcaagacctaatttctacccatttt 85829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 313 - 402
Target Start/End: Complemental strand, 8506 - 8418
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||    
T  8506 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaa 8418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 448
Target Start/End: Complemental strand, 44048 - 43913
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| | ||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| ||||||||||||| |||| |       
T  44048 acccagttcggtccaatatgatctattctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaatagcttgca 43950  T
Q  413 agctcaca-aagaacaaaacttaatttctacccattt 448  Q
    |||| | | |||||||| || ||||||||||||||||    
T  43949 agcttatacaagaacaagacctaatttctacccattt 43913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 448
Target Start/End: Complemental strand, 36919 - 36784
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| ||||| ||||  ||| | | |||||||| ||| |||| |||||| |||||||||| |||||| ||||||||||||| |||| |       
T  36919 acccagttcggtccaatatgacctaatctagggaagagagcagctcgccaacccactatgatgaaagtgttacaaa-gagttacaagaaaatagcttgca 36821  T
Q  413 agctcaca-aagaacaaaacttaatttctacccattt 448  Q
    |||| ||| |||||||| || | ||||||||||||||    
T  36820 agcttacacaagaacaagacatgatttctacccattt 36784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 347 - 449
Target Start/End: Original strand, 17307 - 17410
Alignment:
Q  347 agagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatttctaccca 445  Q
    |||||||| | |||||||||| || |||||||||| |||||| |||||||||||||||||| ||  |||| ||| |||||||| || ||||||||||| |    
T  17307 agagagcaaccctccaatccattatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagacctaatttctaccta 17406  T
Q  446 tttt 449  Q
    ||||    
T  17407 tttt 17410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 452
Target Start/End: Complemental strand, 102553 - 102442
Alignment:
Q  341 tggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttct 440  Q
    |||| |||||| || |||||  |||||| | ||| | |||||||||||   |||||||||||||| | ||| |||||||||| |||||| | ||||||||    
T  102553 tggaagagagaacaactctctgatccacaatgataagagtgatacaaagaggttacaagaaattatcttaaaagctcacaaaaaacaaaccctaatttct 102454  T
Q  441 acccatttttca 452  Q
    ||||||||||||    
T  102453 acccatttttca 102442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 402
Target Start/End: Complemental strand, 18013 - 17951
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  18013 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 17951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 402
Target Start/End: Complemental strand, 24106 - 24044
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 402  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  24106 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 24044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 451
Target Start/End: Complemental strand, 16075 - 15937
Alignment:
Q  313 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 412  Q
    ||||| ||||||| || |||| || || ||||| ||||| || | ||| ||||||||| ||| | ||| |||||||   |||||||||||||||| |||     
T  16075 acccagttcggtccaaaataatctactatggagaagagaacaacactctaatccactatgataagagttatacaaagatgttacaagaaattagcttaaa 15976  T
Q  413 agctcacaaagaacaaaacttaatttctacccatttttc 451  Q
    | | ||||||||||||||| ||||||   ||||||||||    
T  15975 aacccacaaagaacaaaacctaattttcccccatttttc 15937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 387
Target Start/End: Complemental strand, 29566 - 29506
Alignment:
Q  327 aatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaa 387  Q
    ||||| |||| |||| ||||||||| ||  |||| ||||||||||||||||||||||||||    
T  29566 aatatgacctactctagaggagagaacaattctctaatccactaagatgaaagtgatacaa 29506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 387
Target Start/End: Original strand, 43278 - 43338
Alignment:
Q  327 aatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaa 387  Q
    ||||| |||| |||| ||||||||| ||  |||| ||||||||||||||||||||||||||    
T  43278 aatatgacctactctagaggagagaacaattctctaatccactaagatgaaagtgatacaa 43338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 438
Target Start/End: Complemental strand, 10561 - 10515
Alignment:
Q  392 gttacaagaaattagcataagagctcacaaagaacaaaacttaattt 438  Q
    ||||||| ||||||||| |||||||||||||||||||| | ||||||    
T  10561 gttacaataaattagcacaagagctcacaaagaacaaaccctaattt 10515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 107 - 143
Target Start/End: Original strand, 27249 - 27285
Alignment:
Q  107 ttgttgtgaattgggactcaaatctcacaccaataaa 143  Q
    |||||||||||| |||||||||||||||| |||||||    
T  27249 ttgttgtgaattcggactcaaatctcacatcaataaa 27285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 339 - 379
Target Start/End: Original strand, 45289 - 45329
Alignment:
Q  339 tctggaggagagagcacctctccaatccactaagatgaaag 379  Q
    ||||| |||||||||| ||||||||||||||| ||||||||    
T  45289 tctgggggagagagcagctctccaatccactatgatgaaag 45329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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