View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4186_low_13 (Length: 327)

Name: NF4186_low_13
Description: NF4186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4186_low_13
NF4186_low_13
[»] chr4 (39 HSPs)
chr4 (1-171)||(23707850-23708020)
chr4 (56-171)||(41861735-41861849)
chr4 (56-171)||(52680485-52680599)
chr4 (1-158)||(8119426-8119577)
chr4 (56-171)||(23009657-23009772)
chr4 (81-167)||(23707968-23708054)
chr4 (58-171)||(23009970-23010083)
chr4 (32-109)||(23708056-23708133)
chr4 (180-317)||(23707227-23707366)
chr4 (1-158)||(8119534-8119685)
chr4 (56-171)||(41946283-41946397)
chr4 (1-158)||(8119750-8119895)
chr4 (1-158)||(8119642-8119793)
chr4 (58-157)||(26603671-26603770)
chr4 (60-154)||(23009771-23009865)
chr4 (1-55)||(41861737-41861791)
chr4 (1-55)||(52680543-52680597)
chr4 (1-61)||(23707846-23707906)
chr4 (60-148)||(54242942-54243030)
chr4 (4-55)||(41946285-41946336)
chr4 (67-158)||(8119372-8119469)
chr4 (60-148)||(54242787-54242875)
chr4 (60-148)||(11659283-11659371)
chr4 (1-55)||(23009972-23010026)
chr4 (56-114)||(50234768-50234825)
chr4 (60-148)||(22453763-22453850)
chr4 (53-148)||(48808346-48808441)
chr4 (1-55)||(23009659-23009713)
chr4 (60-114)||(54243090-54243144)
chr4 (180-254)||(55466351-55466425)
chr4 (60-148)||(11654419-11654507)
chr4 (56-104)||(23009516-23009564)
chr4 (67-142)||(8120225-8120300)
chr4 (1-40)||(23009771-23009810)
chr4 (53-112)||(34336829-34336888)
chr4 (90-148)||(11654618-11654676)
chr4 (1-43)||(26603671-26603713)
chr4 (58-148)||(39405529-39405619)
chr4 (59-111)||(40910124-40910176)
[»] chr7 (27 HSPs)
chr7 (56-171)||(13604751-13604866)
chr7 (180-316)||(23096220-23096354)
chr7 (56-165)||(23096833-23096942)
chr7 (56-171)||(7891508-7891622)
chr7 (56-171)||(22004731-22004845)
chr7 (59-169)||(40239318-40239428)
chr7 (56-167)||(29953953-29954064)
chr7 (1-55)||(7891566-7891620)
chr7 (1-55)||(13604753-13604807)
chr7 (1-55)||(22004789-22004843)
chr7 (53-148)||(34406586-34406681)
chr7 (64-148)||(2734375-2734459)
chr7 (60-148)||(15236312-15236400)
chr7 (60-149)||(16717855-16717944)
chr7 (60-149)||(17692065-17692154)
chr7 (1-58)||(40239374-40239431)
chr7 (60-148)||(2733618-2733706)
chr7 (60-148)||(2734074-2734162)
chr7 (60-146)||(2733775-2733861)
chr7 (60-114)||(15236616-15236670)
chr7 (60-114)||(34406467-34406521)
chr7 (183-254)||(23096503-23096572)
chr7 (1-45)||(23096839-23096883)
chr7 (1-53)||(29954012-29954064)
chr7 (60-148)||(34406745-34406833)
chr7 (60-111)||(32200410-32200461)
chr7 (60-112)||(32661098-32661150)
[»] chr3 (30 HSPs)
chr3 (58-171)||(53522690-53522803)
chr3 (56-169)||(40817377-40817490)
chr3 (180-317)||(40817873-40818013)
chr3 (56-171)||(36093669-36093783)
chr3 (56-171)||(18199570-18199684)
chr3 (56-171)||(26949265-26949379)
chr3 (2-71)||(40817437-40817506)
chr3 (4-71)||(26949326-26949393)
chr3 (1-61)||(36093665-36093725)
chr3 (53-148)||(40822300-40822395)
chr3 (56-148)||(40822761-40822853)
chr3 (60-148)||(49067926-49068014)
chr3 (60-148)||(53927540-53927628)
chr3 (4-55)||(18199631-18199682)
chr3 (56-111)||(36006893-36006948)
chr3 (184-250)||(14602365-14602431)
chr3 (2-55)||(53522692-53522745)
chr3 (60-148)||(40822147-40822235)
chr3 (60-114)||(36946478-36946532)
chr3 (60-148)||(40822610-40822698)
chr3 (60-148)||(53927128-53927216)
chr3 (60-140)||(55369550-55369630)
chr3 (60-140)||(55369705-55369785)
chr3 (60-148)||(40822455-40822543)
chr3 (60-112)||(51654896-51654948)
chr3 (60-148)||(53927424-53927512)
chr3 (85-148)||(36946756-36946819)
chr3 (60-111)||(40793631-40793682)
chr3 (60-112)||(51654833-51654885)
chr3 (60-148)||(53927283-53927371)
[»] chr6 (22 HSPs)
chr6 (56-171)||(30142458-30142572)
chr6 (59-170)||(25000208-25000319)
chr6 (56-171)||(440309-440425)
chr6 (56-171)||(30142298-30142413)
chr6 (184-317)||(440862-440997)
chr6 (56-171)||(3589426-3589540)
chr6 (60-148)||(21855417-21855505)
chr6 (4-55)||(3589487-3589538)
chr6 (56-162)||(6399535-6399636)
chr6 (2-55)||(30142518-30142570)
chr6 (60-147)||(26899663-26899750)
chr6 (5-55)||(25000268-25000318)
chr6 (60-148)||(21854930-21855018)
chr6 (1-55)||(440368-440423)
chr6 (4-55)||(30142360-30142411)
chr6 (1-51)||(6399532-6399582)
chr6 (60-148)||(26899808-26899896)
chr6 (56-111)||(4621123-4621178)
chr6 (91-148)||(21855539-21855596)
chr6 (60-114)||(21854809-21854863)
chr6 (60-146)||(21855103-21855189)
chr6 (60-140)||(21855270-21855350)
[»] chr5 (27 HSPs)
chr5 (69-171)||(25756942-25757044)
chr5 (56-171)||(21267045-21267160)
chr5 (56-171)||(32673017-32673131)
chr5 (184-317)||(21267909-21268044)
chr5 (56-155)||(38096512-38096611)
chr5 (69-171)||(25790757-25790859)
chr5 (60-148)||(17414346-17414434)
chr5 (1-55)||(32673075-32673129)
chr5 (63-148)||(38096973-38097058)
chr5 (183-254)||(21267655-21267726)
chr5 (60-148)||(17547733-17547821)
chr5 (9-61)||(25756938-25756990)
chr5 (60-148)||(35393492-35393580)
chr5 (60-148)||(35393647-35393735)
chr5 (60-148)||(38096679-38096767)
chr5 (60-148)||(41041789-41041877)
chr5 (1-48)||(25790803-25790850)
chr5 (67-148)||(38096825-38096906)
chr5 (60-148)||(32719209-32719297)
chr5 (1-41)||(38096512-38096552)
chr5 (60-140)||(41041968-41042048)
chr5 (60-114)||(17547462-17547516)
chr5 (10-55)||(21267113-21267158)
chr5 (60-115)||(38097057-38097112)
chr5 (60-148)||(35394126-35394213)
chr5 (84-148)||(35394285-35394349)
chr5 (60-148)||(41042122-41042210)
[»] chr2 (13 HSPs)
chr2 (56-171)||(40603495-40603609)
chr2 (56-167)||(13906031-13906141)
chr2 (56-171)||(26453660-26453774)
chr2 (1-55)||(26453718-26453772)
chr2 (1-55)||(40603553-40603607)
chr2 (1-53)||(13906089-13906141)
chr2 (60-148)||(38328108-38328196)
chr2 (60-148)||(38328970-38329058)
chr2 (60-148)||(39087636-39087724)
chr2 (63-148)||(38328556-38328641)
chr2 (60-148)||(38327916-38328004)
chr2 (60-148)||(38328254-38328342)
chr2 (60-148)||(39087798-39087886)
[»] chr1 (9 HSPs)
chr1 (56-171)||(2047110-2047224)
chr1 (56-171)||(36461788-36461902)
chr1 (56-170)||(35596817-35596929)
chr1 (56-158)||(35597873-35597974)
chr1 (1-55)||(2047112-2047166)
chr1 (1-61)||(36461847-36461906)
chr1 (56-111)||(21055889-21055944)
chr1 (1-55)||(35596818-35596871)
chr1 (56-96)||(8256237-8256277)
[»] scaffold0121 (2 HSPs)
scaffold0121 (56-171)||(41548-41662)
scaffold0121 (1-61)||(41606-41666)
[»] chr8 (12 HSPs)
chr8 (56-171)||(14996340-14996454)
chr8 (63-160)||(35607023-35607119)
chr8 (58-171)||(23274383-23274496)
chr8 (60-148)||(41843994-41844082)
chr8 (1-55)||(14996342-14996396)
chr8 (56-148)||(41844193-41844285)
chr8 (60-148)||(16913986-16914073)
chr8 (60-148)||(41843839-41843927)
chr8 (7-55)||(23274446-23274494)
chr8 (56-122)||(35606956-35607019)
chr8 (62-148)||(14994037-14994123)
chr8 (1-51)||(35607074-35607124)
[»] scaffold0090 (4 HSPs)
scaffold0090 (60-145)||(13892-13977)
scaffold0090 (60-148)||(13425-13513)
scaffold0090 (60-148)||(13587-13675)
scaffold0090 (60-148)||(13735-13823)
[»] scaffold0246 (2 HSPs)
scaffold0246 (56-148)||(9799-9891)
scaffold0246 (60-148)||(9644-9732)
[»] scaffold0891 (1 HSPs)
scaffold0891 (60-148)||(2077-2166)


Alignment Details
Target: chr4 (Bit Score: 123; Significance: 4e-63; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 23708020 - 23707850
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatcttcttttatttattaaagttaacccaaatgctaattgttgccctaa 100  Q
    ||||||||  |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  23708020 cagtgcttttttttactgtattacccctgtttaaaatatcaaattgcagaaattttcttttatttattaaagttaacccgaatgctaattgttgccctaa 23707921  T
Q  101 ttttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatcaaattgcataaatctcc 171  Q
    |||||| ||||||| |||| ||  |||||||||||||||||| ||||||||||||||||||| ||||||||    
T  23707920 ttttaagctaaattcagtgcttgcttttactgtattacccctatttaaaatatcaaattgcagaaatctcc 23707850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 41861849 - 41861735
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||| |||| ||  |||||||||||||||| ||||||||||||||    
T  41861849 tcttttatttattaaagttaacccgaatgctaattgttgccctaa-tttaacttaaattcagtgcttgcttttactgtattacccatgtttaaaatatca 41861751  T
Q  156 aattgcataaatctcc 171  Q
    ||||||| ||||||||    
T  41861750 aattgcagaaatctcc 41861735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 52680485 - 52680599
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||| |||| ||  |||||||||||||||| ||||||||||||||    
T  52680485 tcttttatttattaaagttaacccgaatgctaattgttgccctaa-tttaacttaaattcagtgcttgcttttactgtattacccatgtttaaaatatca 52680583  T
Q  156 aattgcataaatctcc 171  Q
    ||||||| ||||||||    
T  52680584 aattgcagaaatctcc 52680599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 8119426 - 8119577
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatcttcttttatttattaaagttaacccaaatgctaattgttgccctaa 100  Q
    ||||||||||||||||||||| |||| |||||||||||||||||            ||||||||||||||||||||||| ||||||||||||||||||||    
T  8119426 cagtgcttgcttttactgtatcacccctgtttaaaatatcaaat------------cttttatttattaaagttaacccgaatgctaattgttgccctaa 8119513  T
Q  101 tttt------aacctaaatttagtgttttgttttactgtattacccctgtttaaaatatcaaat 158  Q
    ||||      |||||||||| |||| ||  ||||||||||||||||||||||||||||||||||    
T  8119514 ttttaacctaaacctaaattcagtgcttgcttttactgtattacccctgtttaaaatatcaaat 8119577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 23009772 - 23009657
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    |||||||||||||||||||||| |  ||||||||  ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||| |||||||    
T  23009772 tcttttatttattaaagttaacacggatgctaatgtttgccctaattttaacctaaattcagtgtttacttttactgtattacccctgtttagaatatca 23009673  T
Q  156 aattgcataaatctcc 171  Q
    |||||||  |||||||    
T  23009672 aattgcagtaatctcc 23009657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 81 - 167
Target Start/End: Complemental strand, 23708054 - 23707968
Alignment:
Q  81 aatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatcaaattgcataaat 167  Q
    |||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||| ||||    
T  23708054 aatgctaattgttgccctaattttaacctaaattcagtgcttttttttactgtattacccctgtttaaaatatcaaattgcagaaat 23707968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 58 - 171
Target Start/End: Complemental strand, 23010083 - 23009970
Alignment:
Q  58 ttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatcaaa 157  Q
    ||||||||||||||||||||||  ||||||||  |||||||||||||||| |||||| |||||||  ||||||||||||||||||||| ||||||| |||    
T  23010083 ttttatttattaaagttaacccggatgctaatgtttgccctaattttaacttaaattcagtgtttgcttttactgtattacccctgttcaaaatattaaa 23009984  T
Q  158 ttgcataaatctcc 171  Q
    ||||| ||||||||    
T  23009983 ttgcagaaatctcc 23009970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 23708133 - 23708056
Alignment:
Q  32 taaaatatcaaattgcagaaatcttcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacct 109  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23708133 taaaatataaaattgcagaaatcttcttttatttattaaagttaacccgaatgctaattgttgccctaattttaacct 23708056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 23707366 - 23707227
Alignment:
Q  180 gtccgttcttccatactgaatctatccattgcaggtgcttgaggttaggtttttatgctttgttacttattgata---nnnnnnnnnngtttctatgctt 276  Q
    ||||||||||||||||  |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||             ||||||||||||    
T  23707366 gtccgttcttccataccaaatctatcgattgcaggtgcttcaggttaggtttttatgctttgttacttattgatattttttttgttttgtttctatgctt 23707267  T
Q  277 tgttgttgctatttgtgtttcattttaatggcgttcctttg 317  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  23707266 tgttgttgctatttgtgtttca-gttaatggcgttcctttg 23707227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 8119534 - 8119685
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatcttcttttatttattaaagttaacccaaatgctaattgttgccctaa 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||            ||||||||||||||||||||||| ||||||||| ||||||||||    
T  8119534 cagtgcttgcttttactgtattacccctgtttaaaatatcaaat------------cttttatttattaaagttaacccgaatgctaatcgttgccctaa 8119621  T
Q  101 tttt------aacctaaatttagtgttttgttttactgtattacccctgtttaaaatatcaaat 158  Q
    ||||      |||||||||| |||| ||  ||||||||||||||||||| ||||||||||||||    
T  8119622 ttttatcctaaacctaaattcagtgcttgcttttactgtattacccctgcttaaaatatcaaat 8119685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 41946397 - 41946283
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    ||||||||||||||||||||||||  ||||||||||||||||||| |||||| |||||| | || ||  |||||||||||||||| ||||||||||||||    
T  41946397 tcttttatttattaaagttaacccggatgctaattgttgccctaa-tttaacttaaattcaatgcttgcttttactgtattacccatgtttaaaatatca 41946299  T
Q  156 aattgcataaatctcc 171  Q
    ||||||| ||||||||    
T  41946298 aattgcagaaatctcc 41946283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 8119750 - 8119895
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatcttcttttatttattaaagttaacccaaatgctaattgttgccctaa 100  Q
    ||||||||||||||||| |||||||| || ||||||||||||||            ||||||||||||||||||||||  |||| |||||||||||||||    
T  8119750 cagtgcttgcttttactctattacccctgcttaaaatatcaaat------------cttttatttattaaagttaaccagaatgttaattgttgccctaa 8119837  T
Q  101 ttttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatcaaat 158  Q
     ||||||||||||| | || ||  ||||||||||||||||||||||||||||| ||||    
T  8119838 ctttaacctaaattcaatgcttgcttttactgtattacccctgtttaaaatataaaat 8119895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 8119642 - 8119793
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatcttcttttatttattaaagttaacccaaatgctaattgttgccctaa 100  Q
    |||||||||||||||||||||||||| || ||||||||||||||            |||||||||||||||||||| || ||||||||||||||||||||    
T  8119642 cagtgcttgcttttactgtattacccctgcttaaaatatcaaat------------cttttatttattaaagttaatccgaatgctaattgttgccctaa 8119729  T
Q  101 tttt------aacctaaatttagtgttttgttttactgtattacccctgtttaaaatatcaaat 158  Q
    ||||      |||||||||| |||| ||  ||||||| ||||||||||| ||||||||||||||    
T  8119730 ttttatcctaaacctaaattcagtgcttgcttttactctattacccctgcttaaaatatcaaat 8119793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 26603770 - 26603671
Alignment:
Q  58 ttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatcaaa 157  Q
    |||||||||| |||||||| |  |||||||| |||||||||||||||| |||||| | |||||||  |||||||||||||||||||||||||||||||||    
T  26603770 ttttatttatcaaagttaagctgaatgctaaatgttgccctaattttagcctaaaatcagtgtttacttttactgtattacccctgtttaaaatatcaaa 26603671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 60 - 154
Target Start/End: Complemental strand, 23009865 - 23009771
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatc 154  Q
    ||||||||||||||||||||  || |||||  ||||||| ||||||||||||||| |||| ||  ||||||||||||| ||||||||||||||||    
T  23009865 ttatttattaaagttaacccggattctaatgtttgcccttattttaacctaaattcagtgcttgcttttactgtattagccctgtttaaaatatc 23009771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 41861791 - 41861737
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatct 55  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41861791 cagtgcttgcttttactgtattacccatgtttaaaatatcaaattgcagaaatct 41861737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 52680543 - 52680597
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatct 55  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  52680543 cagtgcttgcttttactgtattacccatgtttaaaatatcaaattgcagaaatct 52680597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23707906 - 23707846
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatcttctttt 61  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||    
T  23707906 cagtgcttgcttttactgtattacccctatttaaaatatcaaattgcagaaatctcctttt 23707846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 54242942 - 54243030
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||||||| | ||||| |||||||||||||||||||||||||   || ||  ||||||||||||||||| ||||||    
T  54242942 ttatttattaaagttaacccagacgctaactgttgccctaattttaacctaaattctatgcttatttttactgtattacccccgtttaa 54243030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 41946336 - 41946285
Alignment:
Q  4 tgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatct 55  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41946336 tgcttgcttttactgtattacccatgtttaaaatatcaaattgcagaaatct 41946285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 8119372 - 8119469
Alignment:
Q  67 ttaaagttaacccaaatgctaattgttgccctaattttaacc------taaatttagtgttttgttttactgtattacccctgtttaaaatatcaaat 158  Q
    |||||||||| || ||||||||||||||||||||||||||||      |||||| |||| ||  ||||||||||| ||||||||||||||||||||||    
T  8119372 ttaaagttaatccgaatgctaattgttgccctaattttaacctaaacttaaattcagtgcttgcttttactgtatcacccctgtttaaaatatcaaat 8119469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 54242787 - 54242875
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||||||||||||||||| || | ||||| |||||||||||||||||||||||||   || ||  |||||||||||||||| |||||||    
T  54242787 ttatttattaaagttaactcagacgctaactgttgccctaattttaacctaaattatatgcttacttttactgtattacccatgtttaa 54242875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 11659371 - 11659283
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||||||  | | ||| |||||||||||||||||||||||||   || ||  |||||||||||||||||| |||||    
T  11659371 ttatttattaaagttaacccggacgttaactgttgccctaattttaacctaaattctatgcttacttttactgtattacccctctttaa 11659283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 23010026 - 23009972
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatct 55  Q
    ||||| |||||||||||||||||||| |||| ||||||| |||||||||||||||    
T  23010026 cagtgtttgcttttactgtattacccctgttcaaaatattaaattgcagaaatct 23009972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 50234825 - 50234768
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatt 114  Q
    ||||||||||||||||||||| | || || |||||||||||||||||||||||||||||    
T  50234825 tcttttatttattaaagttaatcgaa-tgataattgttgccctaattttaacctaaatt 50234768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 22453763 - 22453850
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||||| ||  | ||| ||||| ||||||||||||||||||||  || ||  |||||||||| |||||||||||||    
T  22453763 ttatttattaaagttaaccgaac-gttaactgttgtcctaattttaacctaaattttatgcttacttttactgtactacccctgtttaa 22453850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 148
Target Start/End: Original strand, 48808346 - 48808441
Alignment:
Q  53 tcttcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||||| |||||  ||||||||||||| ||||| || ||||||||||| |||||||||| |||| || ||  || |||||||||| |||| |||||    
T  48808346 tcttctcttattccttaaagttaacccgaatgcaaaatgttgccctaaatttaacctaactttaatgattaattatactgtattagccctatttaa 48808441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 23009713 - 23009659
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatct 55  Q
    ||||| || ||||||||||||||||| |||||| ||||||||||||||| |||||    
T  23009713 cagtgtttacttttactgtattacccctgtttagaatatcaaattgcagtaatct 23009659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 54243090 - 54243144
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatt 114  Q
    ||||||||||||||||||||  | |||||  ||||||||||||||||||||||||    
T  54243090 ttatttattaaagttaacccggacgctaacggttgccctaattttaacctaaatt 54243144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 254
Target Start/End: Original strand, 55466351 - 55466425
Alignment:
Q  180 gtccgttcttccatactgaatctatccattgcaggtgcttgaggttaggtttttatgctttgttacttattgata 254  Q
    |||||||||| ||||| |||||| ||||| |||| ||||| ||||||||||| |||| |||||| | ||||||||    
T  55466351 gtccgttctttcataccgaatctctccatcgcagttgcttcaggttaggtttctatgttttgtttcgtattgata 55466425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 11654507 - 11654419
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||||||  |  |||| |||| ||||||||||||||||||||   || ||  ||||||||||||||| || |||||    
T  11654507 ttatttattaaagttaacccggaccctaactgtttccctaattttaacctaaattatatgcttacttttactgtattacctctatttaa 11654419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 23009564 - 23009516
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaatttt 104  Q
    ||||||||||||||||||||||||  ||||||||  |||||||||||||    
T  23009564 tcttttatttattaaagttaacccggatgctaatgtttgccctaatttt 23009516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 8120225 - 8120300
Alignment:
Q  67 ttaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccct 142  Q
    ||||||||||||| || ||||||||||||||||  ||||||||||   || || ||  ||||||||||||||||||    
T  8120225 ttaaagttaacccgaacgctaattgttgccctagatttaacctaaccctaatgcttaattttactgtattacccct 8120300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 23009810 - 23009771
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatc 40  Q
    ||||||||||||||||||||||| || |||||||||||||    
T  23009810 cagtgcttgcttttactgtattagccctgtttaaaatatc 23009771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 34336829 - 34336888
Alignment:
Q  53 tcttcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaa 112  Q
    ||||||||||| ||||||||||||| || | ||| ||| | |||||||||||||||||||    
T  34336829 tcttcttttatatattaaagttaacacataagcttattttagccctaattttaacctaaa 34336888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 11654676 - 11654618
Alignment:
Q  90 tgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||||||||||||  || ||  |||||||||| ||||| |||||||    
T  11654676 tgttgccctaattttaacctaaattttatgcttacttttactgtaatacccttgtttaa 11654618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26603713 - 26603671
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaa 43  Q
    ||||| || ||||||||||||||||| ||||||||||||||||    
T  26603713 cagtgtttacttttactgtattacccctgtttaaaatatcaaa 26603671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 39405529 - 39405619
Alignment:
Q  58 ttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||||||| ||||||||||||| ||||| || | ||||||||  |||||||||||||   || ||  ||||||||||||| |||| |||||    
T  39405529 ttttatttcttaaagttaacccgaatgcaaaatcttgccctagatttaacctaaattctttgcttaattttactgtattaaccctatttaa 39405619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 40910124 - 40910176
Alignment:
Q  59 tttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaa 111  Q
    ||||| ||| ||||||||||| |||||||||||||| ||||  ||||||||||    
T  40910124 tttatatataaaagttaacccgaatgctaattgttgtcctagatttaacctaa 40910176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 13604866 - 13604751
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||  |||||||||||||||||||||||||||||||    
T  13604866 tcttttatttattaaagttaacccatatgctaattgttgccctaattttaacctaaattcagtgcttgcttttactgtattacccctgtttaaaatatca 13604767  T
Q  156 aattgcataaatctcc 171  Q
    ||||||| ||||||||    
T  13604766 aattgcagaaatctcc 13604751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 180 - 316
Target Start/End: Complemental strand, 23096354 - 23096220
Alignment:
Q  180 gtccgttcttccatactgaatctatccattgcaggtgcttgaggttaggtttttatgctttgttacttattgatannnnnnnnnngtttctatgctttgt 279  Q
    |||||||||||||||| |||||||||||| |||||||||| |||||| |||| ||||||||||||||||||||||          |||||||||||||||    
T  23096354 gtccgttcttccataccgaatctatccatggcaggtgctttaggtta-gtttctatgctttgttacttattgata-tttttttttgtttctatgctttgt 23096257  T
Q  280 tgttgctatttgtgtttcattttaatggcgttccttt 316  Q
    |||| ||||||||||||||||||||||||||||||||    
T  23096256 tgttcctatttgtgtttcattttaatggcgttccttt 23096220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 56 - 165
Target Start/End: Complemental strand, 23096942 - 23096833
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    |||||||||||||||||||||||| |||||||||||||||  |||||||||| |||||| |||||||  |||||||||||||||||||| ||||||||||    
T  23096942 tcttttatttattaaagttaacccgaatgctaattgttgcgataattttaacttaaattcagtgtttgcttttactgtattacccctgtataaaatatca 23096843  T
Q  156 aattgcataa 165  Q
    |||| |||||    
T  23096842 aattacataa 23096833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 7891508 - 7891622
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||| ||| |||||| |||| ||  |||||||||||||||| ||||||||||||||    
T  7891508 tcttttatttattaaagttaacccgaatgctaattgttgctctaattt-aacttaaattcagtgcttgcttttactgtattacccatgtttaaaatatca 7891606  T
Q  156 aattgcataaatctcc 171  Q
    ||||||| ||||||||    
T  7891607 aattgcagaaatctcc 7891622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 22004731 - 22004845
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||| ||| |||||| |||| ||  |||||||||||||||| ||||||||||||||    
T  22004731 tcttttatttattaaagttaacccgaatgctaattgttgtcctaattt-aacttaaattcagtgcttgcttttactgtattacccatgtttaaaatatca 22004829  T
Q  156 aattgcataaatctcc 171  Q
    ||||||| ||||||||    
T  22004830 aattgcagaaatctcc 22004845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 59 - 169
Target Start/End: Original strand, 40239318 - 40239428
Alignment:
Q  59 tttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatcaaat 158  Q
    ||||||||||||||||||||| |||| ||||||||||  ||||||||||||||||| |||||||  ||||||| ||||||| ||||||||||||||||||    
T  40239318 tttatttattaaagttaacccgaatgttaattgttgctttaattttaacctaaattcagtgtttgcttttactctattacctctgtttaaaatatcaaat 40239417  T
Q  159 tgcataaatct 169  Q
    |||| ||||||    
T  40239418 tgcagaaatct 40239428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 56 - 167
Target Start/End: Original strand, 29953953 - 29954064
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    ||||||||||||||||||||| |  || ||||||||||||||||||||||||||||||| |||| ||  ||||||||||||| |||| ||||||| ||||    
T  29953953 tcttttatttattaaagttaatcagaaggctaattgttgccctaattttaacctaaattcagtgcttgcttttactgtattatccctatttaaaagatca 29954052  T
Q  156 aattgcataaat 167  Q
    || |||| ||||    
T  29954053 aaatgcagaaat 29954064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 7891566 - 7891620
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatct 55  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7891566 cagtgcttgcttttactgtattacccatgtttaaaatatcaaattgcagaaatct 7891620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 13604807 - 13604753
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatct 55  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13604807 cagtgcttgcttttactgtattacccctgtttaaaatatcaaattgcagaaatct 13604753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 22004789 - 22004843
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatct 55  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22004789 cagtgcttgcttttactgtattacccatgtttaaaatatcaaattgcagaaatct 22004843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 148
Target Start/End: Complemental strand, 34406681 - 34406586
Alignment:
Q  53 tcttcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||||| ||||||||||||||||||| | | | ||| |||||||||||||||||| |||||||  |||||  ||||| ||||||||||||||||||    
T  34406681 tcttctcttatttattaaagttaacctagacgttaactgttgccctaattttaacataaattttatgtttacttttattgtattacccctgtttaa 34406586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 148
Target Start/End: Complemental strand, 2734459 - 2734375
Alignment:
Q  64 ttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||  | | ||| ||||||||||||||||||||||||||  || ||  ||||||||||||||||||||||||    
T  2734459 ttattaaagttaacccggacgttaactgttgccctaattttaacctaaattttatgcttacttttactgtattacccctgtttaa 2734375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 15236312 - 15236400
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||||||  |  ||||||||||||||||||||||||||||||   || ||  |||||||||||||||||| |||||    
T  15236312 ttatttattaaagttaacccggacactaattgttgccctaattttaacctaaattatatgcttacttttactgtattacccctatttaa 15236400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 60 - 149
Target Start/End: Original strand, 16717855 - 16717944
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaa 149  Q
    ||||||||||||||||||||  | | ||||||||||||||||||||| |||||||   || ||  |||||||||||||||| ||||||||    
T  16717855 ttatttattaaagttaacccggacgttaattgttgccctaattttaatctaaattctatgcttacttttactgtattacccgtgtttaaa 16717944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 60 - 149
Target Start/End: Original strand, 17692065 - 17692154
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaa 149  Q
    ||||||||||||||||||||  | | ||||||||||||||||||||| |||||||   || ||  |||||||||||||||| ||||||||    
T  17692065 ttatttattaaagttaacccggacgttaattgttgccctaattttaatctaaattctatgcttacttttactgtattacccgtgtttaaa 17692154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 40239374 - 40239431
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatcttct 58  Q
    ||||| ||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  40239374 cagtgtttgcttttactctattacctctgtttaaaatatcaaattgcagaaatcttct 40239431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 2733706 - 2733618
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||||||  | | ||| ||||||| |||||||||||||||||   || ||  ||||||||||||||||||||||||    
T  2733706 ttatttattaaagttaacccggacgttaactgttgccttaattttaacctaaattctatgcttgtttttactgtattacccctgtttaa 2733618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 2734162 - 2734074
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||||||  | | ||| | ||||||||||||||||||||||||  || ||  ||||||||||||||| ||||||||    
T  2734162 ttatttattaaagttaacccggacgttaactattgccctaattttaacctaaattttatgcttacttttactgtattacctctgtttaa 2734074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 146
Target Start/End: Complemental strand, 2733861 - 2733775
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgttt 146  Q
    ||||||||||||||| |||   ||| |||||| ||||||||||||||||||||||   || ||  |||||||||||||||| |||||    
T  2733861 ttatttattaaagtttacctggatgttaattgatgccctaattttaacctaaattctatgcttacttttactgtattacccatgttt 2733775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 15236616 - 15236670
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatt 114  Q
    ||||||||||||||||||||  | | ||| |||||||||||||||||||||||||    
T  15236616 ttatttattaaagttaacccggacgttaactgttgccctaattttaacctaaatt 15236670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 114
Target Start/End: Complemental strand, 34406521 - 34406467
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatt 114  Q
    ||||| |||||||||||||| || | ||| |||||||||||||||||||||||||    
T  34406521 ttattaattaaagttaacccgaacgttaactgttgccctaattttaacctaaatt 34406467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 23096572 - 23096503
Alignment:
Q  183 cgttcttccatactgaatctatccattgcaggtgcttgaggttaggtttttatgctttgttacttattgata 254  Q
    ||||||||||||  |||||||||||| |||||||||| ||||| | ||| |||||||||||||  |||||||    
T  23096572 cgttcttccata--gaatctatccatcgcaggtgcttcaggtttgatttctatgctttgttacgaattgata 23096503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 23096883 - 23096839
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaatt 45  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||||    
T  23096883 cagtgtttgcttttactgtattacccctgtataaaatatcaaatt 23096839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 29954012 - 29954064
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaat 53  Q
    ||||||||||||||||||||||| || | ||||||| |||||| |||||||||    
T  29954012 cagtgcttgcttttactgtattatccctatttaaaagatcaaaatgcagaaat 29954064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 34406833 - 34406745
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||||||||||||||||| |  | | ||| |||||||||||||||||||||||||   || ||  ||||||||||||| | ||||||||    
T  34406833 ttatttattaaagttaactcggacgttaactgttgccctaattttaacctaaattctatgcttacttttactgtattaactctgtttaa 34406745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 32200410 - 32200461
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaa 111  Q
    |||||||||||||||||||| ||||| || ||||||||||  ||||||||||    
T  32200410 ttatttattaaagttaacccgaatgcaaaatgttgccctagatttaacctaa 32200461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 32661098 - 32661150
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaa 112  Q
    |||| ||| ||||||||||| || ||| ||| |||||||||||||||||||||    
T  32661098 ttatctataaaagttaacccgaaagcttatttttgccctaattttaacctaaa 32661150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 2e-43; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 58 - 171
Target Start/End: Complemental strand, 53522803 - 53522690
Alignment:
Q  58 ttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatcaaa 157  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||    
T  53522803 ttttatttattaaagttaactcgaatgctaattgttgccctaattttaacctaaatttagtgtttgcttttactttattacccctgtttaaaatatcaaa 53522704  T
Q  158 ttgcataaatctcc 171  Q
    ||||| ||||||||    
T  53522703 ttgcagaaatctcc 53522690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 40817377 - 40817490
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    |||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  40817377 tcttttatttattaaagttaactcgaatgctaattgttaccctaattttaacctaaatttagtgcttgcttttactgtattacccctgtttaaaatatca 40817476  T
Q  156 aattgcataaatct 169  Q
    ||||||| ||||||    
T  40817477 aattgcagaaatct 40817490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 180 - 317
Target Start/End: Original strand, 40817873 - 40818013
Alignment:
Q  180 gtccgttcttccatactgaatctatccattgcaggtgcttgaggttaggtttttatgctttgttacttattgata---nnnnnnnnnngtttctatgctt 276  Q
    |||||||||||||||| |||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||             ||||||||||||    
T  40817873 gtccgttcttccataccgaatctatccatggcaggtgctccaggttaggtttttatgctttgttacttattgatatttttttagttttgtttctatgctt 40817972  T
Q  277 tgttgttgctatttgtgtttcattttaatggcgttcctttg 317  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  40817973 tgttgttgctatttgtgtttcattttaatggcgttcctttg 40818013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 36093783 - 36093669
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||| |||| ||  |||||||||||||||  ||||||||||||||    
T  36093783 tcttttatttattaaagttaacccgaatgctaattgttgccctaa-tttaacttaaattcagtgcttgcttttactgtattacctatgtttaaaatatca 36093685  T
Q  156 aattgcataaatctcc 171  Q
    ||||||| ||||||||    
T  36093684 aattgcagaaatctcc 36093669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 18199570 - 18199684
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    ||||||||||||||||||||||||  ||||||||||||||||||| |||||| |||||| | || ||  |||||||||||||||| ||||||||||||||    
T  18199570 tcttttatttattaaagttaacccggatgctaattgttgccctaa-tttaacttaaattcaatgcttgcttttactgtattacccatgtttaaaatatca 18199668  T
Q  156 aattgcataaatctcc 171  Q
    ||||||| ||||||||    
T  18199669 aattgcaaaaatctcc 18199684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 26949265 - 26949379
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| |||||| |||||| | || ||  |||||||||||||||| ||||||||||||||    
T  26949265 tcttttatttattaaagttaacccgaatgctaattgttgtcctaa-tttaacttaaattcaatgcttgcttttactgtattacccatgtttaaaatatca 26949363  T
Q  156 aattgcataaatctcc 171  Q
    ||||||| ||||||||    
T  26949364 aattgcagaaatctcc 26949379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 40817437 - 40817506
Alignment:
Q  2 agtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatcttcttttatttattaaa 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||| |||||    
T  40817437 agtgcttgcttttactgtattacccctgtttaaaatatcaaattgcagaaatcttttttttttttttaaa 40817506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 26949326 - 26949393
Alignment:
Q  4 tgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatcttcttttatttattaaa 71  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||| |||||    
T  26949326 tgcttgcttttactgtattacccatgtttaaaatatcaaattgcagaaatctcctttttttttttaaa 26949393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 36093725 - 36093665
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatcttctttt 61  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||    
T  36093725 cagtgcttgcttttactgtattacctatgtttaaaatatcaaattgcagaaatctcctttt 36093665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 148
Target Start/End: Original strand, 40822300 - 40822395
Alignment:
Q  53 tcttcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||||| ||||||||||||||||||||  | | ||| |||||||||||||||||||||||||   |||||  |||||||||||||| |||||||||    
T  40822300 tcttctcttatttattaaagttaacccggacgttaactgttgccctaattttaacctaaattctatgtttacttttactgtattactcctgtttaa 40822395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 148
Target Start/End: Original strand, 40822761 - 40822853
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||||||||||| | | ||| |||| ||||||||||||||||||||   || ||  |||||||||||||||| |||||||    
T  40822761 tcttttatttattaaagttaacccagacgttaactgtttccctaattttaacctaaattctatgcttacttttactgtattacccttgtttaa 40822853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 49068014 - 49067926
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||||||  | | ||| |||||||||||||||||||||||||   || ||  ||||||||||||||||||||||||    
T  49068014 ttatttattaaagttaacccggacgttaactgttgccctaattttaacctaaattatatgcttacttttactgtattacccctgtttaa 49067926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 53927628 - 53927540
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||||||||| |||||||||  | ||||| ||||||||||||||||||||||||||  || ||  ||||| ||||||||||||||||||    
T  53927628 ttatttattacagttaacccggacgctaactgttgccctaattttaacctaaattttatgcttacttttattgtattacccctgtttaa 53927540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 18199631 - 18199682
Alignment:
Q  4 tgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatct 55  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  18199631 tgcttgcttttactgtattacccatgtttaaaatatcaaattgcaaaaatct 18199682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 36006948 - 36006893
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaa 111  Q
    ||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||    
T  36006948 tcttttatttattaaagttaatccaaatgctaattgttgccctagatttaacctaa 36006893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 14602365 - 14602431
Alignment:
Q  184 gttcttccatactgaatctatccattgcaggtgcttgaggttaggtttttatgctttgttacttatt 250  Q
    |||||||||||| |||||||||||| ||||||| || ||||||||||| ||||||||||||| ||||    
T  14602365 gttcttccataccgaatctatccatcgcaggtgtttcaggttaggtttctatgctttgttacgtatt 14602431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 53522745 - 53522692
Alignment:
Q  2 agtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatct 55  Q
    |||| ||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  53522745 agtgtttgcttttactttattacccctgtttaaaatatcaaattgcagaaatct 53522692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 40822147 - 40822235
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||||||  | ||||| |||||||||||||||||||||||||   || ||  |||||||||||||| | |||||||    
T  40822147 ttatttattaaagttaacccggacgctaactgttgccctaattttaacctaaattctatgcttacttttactgtattactcttgtttaa 40822235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 60 - 114
Target Start/End: Complemental strand, 36946532 - 36946478
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatt 114  Q
    ||||||||||||||||||||  | ||||| |||||||||||||||||||||||||    
T  36946532 ttatttattaaagttaacccggacgctaactgttgccctaattttaacctaaatt 36946478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 40822610 - 40822698
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||||||||||||||||| || | | ||| |||||||||||||||||| ||||||   || ||  ||||| ||||||||||||||||||    
T  40822610 ttatttattaaagttaactcagacgttaactgttgccctaattttaacataaattctatgcttacttttattgtattacccctgtttaa 40822698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 53927216 - 53927128
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||||| |||||||||||||  ||| ||| ||||||||||||||||||||||||| | || ||  ||||| ||||||| ||||| ||||    
T  53927216 ttattttttaaagttaaccccgatgttaactgttgccctaattttaacctaaattaaatgcttacttttattgtattatccctggttaa 53927128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 140
Target Start/End: Original strand, 55369550 - 55369630
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattaccc 140  Q
    |||||||||||||||||||   | ||||| |||||||||||||||||||||||||   || ||  ||||||||||||||||    
T  55369550 ttatttattaaagttaacctggacgctaactgttgccctaattttaacctaaattctatgcttacttttactgtattaccc 55369630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 140
Target Start/End: Original strand, 55369705 - 55369785
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattaccc 140  Q
    ||||||||||||||||| ||  | ||||| |||||||||||||||||||||||||   || ||  ||||||||||||||||    
T  55369705 ttatttattaaagttaatccggacgctaactgttgccctaattttaacctaaattatatgcttacttttactgtattaccc 55369785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 40822455 - 40822543
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||||| |||||||||||||| | | ||| |||||||||||||| |||||||||||  ||  |  ||||| |||||||| |||||||||    
T  40822455 ttatttcttaaagttaacccagacgttaactgttgccctaatttaaacctaaattttatgaatacttttattgtattacacctgtttaa 40822543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 51654896 - 51654948
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaa 112  Q
    |||| ||||||||||||||| || ||| ||| |||||||||||||||||||||    
T  51654896 ttatatattaaagttaacccgaaagcttatttttgccctaattttaacctaaa 51654948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 53927512 - 53927424
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||||||||||||||| |||  | ||||| ||||||| ||||||||||||||||||  || ||  ||||  |||||||||| |||||||    
T  53927512 ttatttattaaagttatcccggacgctaactgttgccttaattttaacctaaattttatgcttacttttgttgtattacccatgtttaa 53927424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 36946819 - 36946756
Alignment:
Q  85 ctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||| |||||||||||||||||||||||||   || ||  ||||||| ||||||||||||||||    
T  36946819 ctaactgttgccctaattttaacctaaattatatgcttatttttactatattacccctgtttaa 36946756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 40793682 - 40793631
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaa 111  Q
    ||||| |||||||||||||| || ||||||||||||||||  ||||||||||    
T  40793682 ttattcattaaagttaacccgaacgctaattgttgccctagatttaacctaa 40793631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 51654833 - 51654885
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaa 112  Q
    |||| ||||||||||||||| ||  || ||| |||||||||||||||||||||    
T  51654833 ttatatattaaagttaacccgaaaacttatttttgccctaattttaacctaaa 51654885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 53927371 - 53927283
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||||||  | | ||| | |||||||||||||||| ||||||   || ||  ||||||||||||| || |||||||    
T  53927371 ttatttattaaagttaacccggacgttaactattgccctaattttaacataaattatatgcttacttttactgtattaaccatgtttaa 53927283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 2e-37; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 30142458 - 30142572
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||| ||  ||||||||||||| |||||||||||||||||    
T  30142458 tcttttatttattaaagttaacccgaatgctacttgttgccctaattttaacctaactttagtgcttgcttttactgtatta-ccctgtttaaaatatca 30142556  T
Q  156 aattgcataaatctcc 171  Q
    ||||||| ||||||||    
T  30142557 aattgcagaaatctcc 30142572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 25000208 - 25000319
Alignment:
Q  59 tttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatcaaat 158  Q
    ||||||||||||||||||||| || | |||||||||||||||||||||||||||||||  | ||  ||||||||||||||||||||||||||||||||||    
T  25000208 tttatttattaaagttaacccgaaggttaattgttgccctaattttaacctaaatttacagcttgtttttactgtattacccctgtttaaaatatcaaat 25000307  T
Q  159 tgcataaatctc 170  Q
    |||| |||||||    
T  25000308 tgcagaaatctc 25000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 440309 - 440425
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctg-tttaaaatatc 154  Q
    |||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||| |||| ||  |||||||||||||||| || |||||||||||    
T  440309 tcttttatttattaaagttaactcgaatgctaattgttgccctaatcttaacctaaattcagtgcttgattttactgtattacccttgttttaaaatatc 440408  T
Q  155 aaattgcataaatctcc 171  Q
    |||||||| ||||||||    
T  440409 aaattgcagaaatctcc 440425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 30142298 - 30142413
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    |||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||| | || ||  ||||||||||||||| ||||||||||||||     
T  30142298 tcttttatttgttaaaattaacccaaatgctaattgtcgccctaattttaacctaaattcaatgcttgcttttactgtattaccactgtttaaaatatct 30142397  T
Q  156 aattgcataaatctcc 171  Q
    ||||||| ||||||||    
T  30142398 aattgcagaaatctcc 30142413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 440862 - 440997
Alignment:
Q  184 gttcttccatactgaatctatccattgcaggtgcttgaggttaggtttttatgctttgttacttattgata--nnnnnnnnnngtttctatgctttgttg 281  Q
    |||||||||||| |||||||| ||| |||||||||| ||||||||||| ||||||||||||||||||||||            |||||||||||||||||    
T  440862 gttcttccataccgaatctattcatcgcaggtgcttcaggttaggtttctatgctttgttacttattgatatttttttgttttgtttctatgctttgttg 440961  T
Q  282 ttgctatttgtgtttcattttaatggcgttcctttg 317  Q
    ||||||||||||||||| |||||||| |||||||||    
T  440962 ttgctatttgtgtttcactttaatggtgttcctttg 440997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 3589426 - 3589540
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||| ||| |||||| | || ||  |||||||||||||||| ||||||||||||||    
T  3589426 tcttttatttattaaagttaacccggatgctaattgttgccttaattt-aacttaaattcaatgcttgcttttactgtattacccatgtttaaaatatca 3589524  T
Q  156 aattgcataaatctcc 171  Q
    ||||||| ||||||||    
T  3589525 aattgcagaaatctcc 3589540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 21855505 - 21855417
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||||||||||||||||||| || | ||||||||||| ||||||||||||||||||  || ||  ||||| ||||||||||||||||||    
T  21855505 ttatttattaaagttaacccgaacgttaattgttgccataattttaacctaaattttatgcttacttttattgtattacccctgtttaa 21855417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 3589487 - 3589538
Alignment:
Q  4 tgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatct 55  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3589487 tgcttgcttttactgtattacccatgtttaaaatatcaaattgcagaaatct 3589538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 162
Target Start/End: Complemental strand, 6399636 - 6399535
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    |||||||||||||||||||||||    |||||| | |||||||||||||||||||| |  |||| ||  |||||||||||| || |||||||||||||||    
T  6399636 tcttttatttattaaagttaacc----tgctaacttttgccctaattttaacctaa-tccagtgcttgcttttactgtattgcctctgtttaaaatatca 6399542  T
Q  156 aattgca 162  Q
    |||||||    
T  6399541 aattgca 6399535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 30142518 - 30142570
Alignment:
Q  2 agtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatct 55  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30142518 agtgcttgcttttactgtattaccc-tgtttaaaatatcaaattgcagaaatct 30142570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 60 - 147
Target Start/End: Complemental strand, 26899750 - 26899663
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgttta 147  Q
    ||||||||||||||||||||  ||||||| |||||||||||||||| ||||||||   || ||  |||||||||||||| ||||||||    
T  26899750 ttatttattaaagttaacccggatgctaactgttgccctaattttagcctaaattctatgcttacttttactgtattacacctgttta 26899663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 25000268 - 25000318
Alignment:
Q  5 gcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatct 55  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  25000268 gcttgtttttactgtattacccctgtttaaaatatcaaattgcagaaatct 25000318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 21855018 - 21854930
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||||||  ||| || ||||||||||||||||||||||||||   || ||  ||||||| ||||||| ||||||||    
T  21855018 ttatttattaaagttaacccggatgttatttgttgccctaattttaacctaaattctatgcttacttttactctattaccgctgtttaa 21854930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 440368 - 440423
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgttt-aaaatatcaaattgcagaaatct 55  Q
    ||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||    
T  440368 cagtgcttgattttactgtattacccttgttttaaaatatcaaattgcagaaatct 440423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 30142360 - 30142411
Alignment:
Q  4 tgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatct 55  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||||||||    
T  30142360 tgcttgcttttactgtattaccactgtttaaaatatctaattgcagaaatct 30142411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 6399582 - 6399532
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaa 51  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||||||||    
T  6399582 cagtgcttgcttttactgtattgcctctgtttaaaatatcaaattgcagaa 6399532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 26899896 - 26899808
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||||||||||||||||||| || | ||| |||||||||||||||| |||||||||  || ||  ||||| |||| |||| ||||||||    
T  26899896 ttatttattaaagttaacccgaacgttaagtgttgccctaattttatcctaaattttatgcttacttttattgtactacctctgtttaa 26899808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 4621123 - 4621178
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaa 111  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||  ||||||||||    
T  4621123 tcttttatttattaaagttaacccgaatactaattgttaccctagatttaacctaa 4621178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 21855596 - 21855539
Alignment:
Q  91 gttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||||||||||||||||||||||||  || ||  ||||||||||||||| ||||||||    
T  21855596 gttgccctaattttaacctaaattttatgcttacttttactgtattacctctgtttaa 21855539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 114
Target Start/End: Complemental strand, 21854863 - 21854809
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatt 114  Q
    |||||||||||||||||||   ||||||| |||||||||||||| |||| |||||    
T  21854863 ttatttattaaagttaaccaggatgctaactgttgccctaatttaaacccaaatt 21854809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 146
Target Start/End: Complemental strand, 21855189 - 21855103
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgttt 146  Q
    ||||||||||||||||||||  | | ||| | ||||| |||||||||||||||||   || ||  |||||||||||||||| |||||    
T  21855189 ttatttattaaagttaacccggacgttaactattgccttaattttaacctaaattctatgcttacttttactgtattacccttgttt 21855103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 140
Target Start/End: Complemental strand, 21855350 - 21855270
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattaccc 140  Q
    ||||||||||||||||||||    ||||| | ||||||||||||||||||| |||   || ||  ||||||||||||||||    
T  21855350 ttatttattaaagttaacccggtcgctaactattgccctaattttaacctacattatatgcttacttttactgtattaccc 21855270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 6e-37; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 69 - 171
Target Start/End: Complemental strand, 25757044 - 25756942
Alignment:
Q  69 aaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatcaaattgcataaatc 168  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||    
T  25757044 aaagttaacccaaatgctaattattgccttaattttaacctaaattcagtgttggcttttactgtattacccctgtttaaaatatcaaattgcataaatc 25756945  T
Q  169 tcc 171  Q
    |||    
T  25756944 tcc 25756942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 21267045 - 21267160
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    |||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||| |    
T  21267045 tcttttatttattaaagttaacccgaaggctaattgttgccataattttaacctaaattcagtatttacttttactgtattacccctgtttaaaatatta 21267144  T
Q  156 aattgcataaatctcc 171  Q
    |||| || ||||||||    
T  21267145 aattacagaaatctcc 21267160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 32673017 - 32673131
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||| |||| ||  |||||||||||||||| ||||||||||||||    
T  32673017 tcttttatttattaaagttaacccgaatgctaattgttgccctaa-tttaacttaaattcagtgcttgcttttactgtattacccatgtttaaaatatca 32673115  T
Q  156 aattgcataaatctcc 171  Q
    ||||||| ||||||||    
T  32673116 aattgcagaaatctcc 32673131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 21267909 - 21268044
Alignment:
Q  184 gttcttccatactgaatctatccattgcaggtgcttgaggttaggtttttatgctttgttacttattgata--nnnnnnnnnngtttctatgctttgttg 281  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||            |||||||||||||||||    
T  21267909 gttcttccataccgaatctatccattgcaggtgcttcaggttaggtttctatgctttgttacttattgatatttttttgttttgtttctatgctttgttg 21268008  T
Q  282 ttgctatttgtgtttcattttaatggcgttcctttg 317  Q
    ||||||| |||||||||||||||||| |||||||||    
T  21268009 ttgctatctgtgtttcattttaatggtgttcctttg 21268044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 56 - 155
Target Start/End: Complemental strand, 38096611 - 38096512
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||| |||| ||  |||||||||||||||||||||||||||||||    
T  38096611 tcttttatttatcaaagttaacccgaatgctaattgttgccctaattttaacataaattcagtgcttgcttttactgtattacccctgtttaaaatatca 38096512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 69 - 171
Target Start/End: Original strand, 25790757 - 25790859
Alignment:
Q  69 aaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatcaaattgcataaatc 168  Q
    |||||||| || ||| |||||||||||||||||||||||||||||| |||| ||  |||||| ||||||||||||||||||||||||||||||||||| |    
T  25790757 aaagttaatccgaatactaattgttgccctaattttaacctaaattcagtgcttgcttttaccgtattacccctgtttaaaatatcaaattgcataaagc 25790856  T
Q  169 tcc 171  Q
    |||    
T  25790857 tcc 25790859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 17414434 - 17414346
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||| ||||| | ||||| |||||||||||||||||||||||||   |||||  ||||||||||||||||||||||||    
T  17414434 ttatttattaaagttgacccagacgctaactgttgccctaattttaacctaaattatatgtttacttttactgtattacccctgtttaa 17414346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 32673075 - 32673129
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatct 55  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32673075 cagtgcttgcttttactgtattacccatgtttaaaatatcaaattgcagaaatct 32673129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 148
Target Start/End: Complemental strand, 38097058 - 38096973
Alignment:
Q  63 tttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||||||||||||||||  | ||||| ||||||||||||||||||||||||||  || ||  ||||||||||||||||||||||||    
T  38097058 tttattaaagttaacccggacgctaactgttgccctaattttaacctaaattttatgcttacttttactgtattacccctgtttaa 38096973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 21267655 - 21267726
Alignment:
Q  183 cgttcttccatactgaatctatccattgcaggtgcttgaggttaggtttttatgctttgttacttattgata 254  Q
    ||||||||||||| |||||||||||| |||||||||| ||||| ||||| ||||||||||||| ||||||||    
T  21267655 cgttcttccataccgaatctatccatcgcaggtgcttcaggtttggtttctatgctttgttacgtattgata 21267726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 17547821 - 17547733
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||||||  |  ||||||||||||||||||||||||||||||   || ||  |||||||||||||||||| |||||    
T  17547821 ttatttattaaagttaacccggacactaattgttgccctaattttaacctaaattatatgcttacttttactgtattacccctatttaa 17547733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 25756990 - 25756938
Alignment:
Q  9 gcttttactgtattacccgtgtttaaaatatcaaattgcagaaatcttctttt 61  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||| |||||    
T  25756990 gcttttactgtattacccctgtttaaaatatcaaattgcataaatctcctttt 25756938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 35393580 - 35393492
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||||||  | ||||| |||||||||||||||||||||||||   || ||  ||||| |||||||||| |||||||    
T  35393580 ttatttattaaagttaacccggacgctaactgttgccctaattttaacctaaattatatgcttacttttattgtattacccttgtttaa 35393492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 35393735 - 35393647
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||||||||||| |||||||  | ||||| |||||||||||||||||||||||||   || ||  |||||||||||||||||| |||||    
T  35393735 ttatttattaaatttaacccggacgctaactgttgccctaattttaacctaaattatatgcttacttttactgtattacccctatttaa 35393647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 38096767 - 38096679
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||||||  | | ||| ||||||| ||||||||||||||||||  || ||  ||||| ||||||||||||||||||    
T  38096767 ttatttattaaagttaacccggacgttaactgttgccataattttaacctaaattttatgcttacttttaatgtattacccctgtttaa 38096679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 41041877 - 41041789
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||||||  | | ||| |||||||||||||||||||||||||   || ||  |||||||||||||||| |||||||    
T  41041877 ttatttattaaagttaacccggacgttaactgttgccctaattttaacctaaattatatgcttacttttactgtattacccatgtttaa 41041789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 25790803 - 25790850
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgca 48  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||    
T  25790803 cagtgcttgcttttaccgtattacccctgtttaaaatatcaaattgca 25790850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 148
Target Start/End: Complemental strand, 38096906 - 38096825
Alignment:
Q  67 ttaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||||||||||||  | ||||| |||||||||||||||||||||||||   || ||  |||||||||||||||| |||||||    
T  38096906 ttaaagttaacccggacgctaactgttgccctaattttaacctaaattctatgcttacttttactgtattacccatgtttaa 38096825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 32719209 - 32719297
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||| ||||||||||||||  | | ||| |||||||||||||||||||||||||   || ||  |||||||||||||||| |||||||    
T  32719209 ttattaattaaagttaacccggacgttaactgttgccctaattttaacctaaattatatgcttacttttactgtattacccatgtttaa 32719297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 38096552 - 38096512
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatca 41  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  38096552 cagtgcttgcttttactgtattacccctgtttaaaatatca 38096512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 140
Target Start/End: Complemental strand, 41042048 - 41041968
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattaccc 140  Q
    ||||||||||||||||||||  | | ||| |||||||||||||||||||||||||   || ||  ||||||||||||||||    
T  41042048 ttatttattaaagttaacccggacgttaactgttgccctaattttaacctaaattatatgcttatttttactgtattaccc 41041968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 114
Target Start/End: Complemental strand, 17547516 - 17547462
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatt 114  Q
    ||||||||||||||||||||  | | ||| |||||||||||||||||||||||||    
T  17547516 ttatttattaaagttaacccggacgttaactgttgccctaattttaacctaaatt 17547462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 21267113 - 21267158
Alignment:
Q  10 cttttactgtattacccgtgtttaaaatatcaaattgcagaaatct 55  Q
    ||||||||||||||||| |||||||||||| ||||| |||||||||    
T  21267113 cttttactgtattacccctgtttaaaatattaaattacagaaatct 21267158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 38097112 - 38097057
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaattt 115  Q
    |||||||||||||||||  |  | ||||| ||||||||||||||||||||||||||    
T  38097112 ttatttattaaagttaaatcggacgctaactgttgccctaattttaacctaaattt 38097057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 35394213 - 35394126
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||||||||||||||||||| || ||||| || || || ||||||||| ||||||   || ||  |||||||||||||||||| |||||    
T  35394213 ttatttattaaagttaacccgaacgctaactggtg-ccgaattttaacataaattctatgcttacttttactgtattacccctatttaa 35394126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 35394349 - 35394285
Alignment:
Q  84 gctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||| |||||||||||||||||||||||||   || ||  |||||||||||||  |||||||||    
T  35394349 gctaactgttgccctaattttaacctaaattatatgcttacttttactgtattattcctgtttaa 35394285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 41042210 - 41042122
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||| | | ||| ||| | ||||| ||||||||||||||||||  || ||  ||||||| ||||| || |||||||    
T  41042210 ttatttattaaagttaatctagatgttaactattgccttaattttaacctaaattttatgcttacttttactatattatccatgtttaa 41042122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 4e-35; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 40603495 - 40603609
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||| |||| ||  |||||||||||||||| ||||||||||||||    
T  40603495 tcttttatttattaaagttaacccgaatgctaattgttgccctaa-tttaacttaaattcagtgcttgcttttactgtattacccatgtttaaaatatca 40603593  T
Q  156 aattgcataaatctcc 171  Q
    ||||||| ||||||||    
T  40603594 aattgcagaaatctcc 40603609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 56 - 167
Target Start/End: Original strand, 13906031 - 13906141
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||| |||| ||  |||||||||||||||| ||||||||||||||    
T  13906031 tcttttatttattaaagttaacccgaatgctaattgttgccctaa-tttaacttaaattcagtgcttgcttttactgtattacccatgtttaaaatatca 13906129  T
Q  156 aattgcataaat 167  Q
    ||||||| ||||    
T  13906130 aattgcagaaat 13906141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 26453660 - 26453774
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||| ||| |||||| |||| ||  |||||||||||||||| ||||||||||||||    
T  26453660 tcttttatttattaaagttaacccgaatgctaattgttgccttaattt-aacttaaattcagtgcttgcttttactgtattacccatgtttaaaatatca 26453758  T
Q  156 aattgcataaatctcc 171  Q
    ||||||| ||||||||    
T  26453759 aattgcagaaatctcc 26453774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 26453718 - 26453772
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatct 55  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26453718 cagtgcttgcttttactgtattacccatgtttaaaatatcaaattgcagaaatct 26453772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 40603553 - 40603607
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatct 55  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  40603553 cagtgcttgcttttactgtattacccatgtttaaaatatcaaattgcagaaatct 40603607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13906089 - 13906141
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaat 53  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13906089 cagtgcttgcttttactgtattacccatgtttaaaatatcaaattgcagaaat 13906141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 38328108 - 38328196
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||||||  | ||||| |||||||||||||||||||||||||   || ||  ||| ||||||||||||||||||||    
T  38328108 ttatttattaaagttaacccggacgctaactgttgccctaattttaacctaaattctatgcttactttcactgtattacccctgtttaa 38328196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 38328970 - 38329058
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||||||  | | ||| |||||||||||||||||||||||||   || ||  ||||||||||||||||||||||||    
T  38328970 ttatttattaaagttaacccggacgttaactgttgccctaattttaacctaaattatatgcttacttttactgtattacccctgtttaa 38329058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 39087724 - 39087636
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||||||||||||||||||| || | ||| |||||||||||||||||||||||||   || ||  |||||||||||||||| |||||||    
T  39087724 ttatttattaaagttaacccgaacgttaactgttgccctaattttaacctaaattctatgcttacttttactgtattacccatgtttaa 39087636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 63 - 148
Target Start/End: Original strand, 38328556 - 38328641
Alignment:
Q  63 tttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||||||||||||||||  | | ||| |||||||||||||||||||||||||   || ||  ||||||||||||||||||||||||    
T  38328556 tttattaaagttaacccggacgttaactgttgccctaattttaacctaaattctatgcttacttttactgtattacccctgtttaa 38328641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 38327916 - 38328004
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||||||  | | |||||||||||||||||||||||||||||   || ||  |||||| ||||||||| |||||||    
T  38327916 ttatttattaaagttaacccggacgttaattgttgccctaattttaacctaaattatatgcttacttttacagtattacccttgtttaa 38328004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 38328254 - 38328342
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||||| |||||||||||||  | | ||| |||||||||||||||||||||||||  ||| ||  |||||||||||||||| |||||||    
T  38328254 ttatttgttaaagttaacccggacgttaactgttgccctaattttaacctaaattatgtgcttacttttactgtattacccatgtttaa 38328342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 39087886 - 39087798
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||||||  |   ||| ||||||| |||||||||| ||||||   || ||  |||||||||||||||||| |||||    
T  39087886 ttatttattaaagttaacccggacattaactgttgccttaattttaacataaattctatgcttacttttactgtattacccctatttaa 39087798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 4e-35; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 2047224 - 2047110
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||| |||| ||  |||||||||||||||| ||||||||||||||    
T  2047224 tcttttatttattaaagttaacccgaatgctaattgttgccctaa-tttaacttaaattcagtgcttgcttttactgtattacccatgtttaaaatatca 2047126  T
Q  156 aattgcataaatctcc 171  Q
    ||||||| ||||||||    
T  2047125 aattgcagaaatctcc 2047110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 36461788 - 36461902
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||| |||| ||  ||||||||||||| |||||||||||||||||    
T  36461788 tcttttatttattaaagttaaccctaatgttaattgttgctctaattttaacctaaattcagtgcttgcttttactgtatta-ccctgtttaaaatatca 36461886  T
Q  156 aattgcataaatctcc 171  Q
    ||||||| ||||||||    
T  36461887 aattgcaaaaatctcc 36461902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 56 - 170
Target Start/End: Complemental strand, 35596929 - 35596817
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||| |||| ||  || || |||||||||| ||||||||||||||    
T  35596929 tcttttatttattaaagttaacccgaatgctaattgttgccctaa-tttaacttaaattcagtgcttgcttcta-tgtattacccatgtttaaaatatca 35596832  T
Q  156 aattgcataaatctc 170  Q
    ||||||| |||||||    
T  35596831 aattgcagaaatctc 35596817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 56 - 158
Target Start/End: Complemental strand, 35597974 - 35597873
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||| |||| ||  || | ||||||||||| ||||||||||||||    
T  35597974 tcttttatttattaaagttaacccgaatgctaattgttgccctaa-tttaacttaaattcagtgattgcttctcctgtattacccatgtttaaaatatca 35597876  T
Q  156 aat 158  Q
    |||    
T  35597875 aat 35597873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 2047166 - 2047112
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatct 55  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2047166 cagtgcttgcttttactgtattacccatgtttaaaatatcaaattgcagaaatct 2047112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 36461847 - 36461906
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatcttctttt 61  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||    
T  36461847 cagtgcttgcttttactgtattaccc-tgtttaaaatatcaaattgcaaaaatctcctttt 36461906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 21055889 - 21055944
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaa 111  Q
    |||||||||||||||||||||||| |||||||||||||||||||  ||||||||||    
T  21055889 tcttttatttattaaagttaacccgaatgctaattgttgccctagatttaacctaa 21055944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 35596871 - 35596818
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatct 55  Q
    |||||||||||| || |||||||||| ||||||||||||||||||||||||||||    
T  35596871 cagtgcttgcttcta-tgtattacccatgtttaaaatatcaaattgcagaaatct 35596818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 8256237 - 8256277
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgcc 96  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  8256237 tcttttatttattaaagttaacccgaatgctaattgttgcc 8256277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 41548 - 41662
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||| ||| |||||| |||| ||  |||||||||||||||| ||||||||||||||    
T  41548 tcttttatttattaaagttaacccgaatgctaattgttgcactaattt-aacttaaattcagtgcttgcttttactgtattacccatgtttaaaatatca 41646  T
Q  156 aattgcataaatctcc 171  Q
    ||||||| ||||||||    
T  41647 aattgcagaaatctcc 41662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 41606 - 41666
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatcttctttt 61  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  41606 cagtgcttgcttttactgtattacccatgtttaaaatatcaaattgcagaaatctcctttt 41666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 14996454 - 14996340
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatca 155  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| || |||||| |||| ||  |||||||||||||||| ||||||||||||||    
T  14996454 tcttttatttattaaagttaacccgaatgctaattgttgccctaa-tttgacttaaattcagtgcttacttttactgtattacccatgtttaaaatatca 14996356  T
Q  156 aattgcataaatctcc 171  Q
    ||||||| ||||||||    
T  14996355 aattgcagaaatctcc 14996340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 63 - 160
Target Start/End: Original strand, 35607023 - 35607119
Alignment:
Q  63 tttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatcaaattg 160  Q
    ||||||||||||||||| | |||||| | ||||||||||||||||||||||| |||||||  |||||||||||| |||||||||||||||||||||||    
T  35607023 tttattaaagttaacccga-tgctaacttttgccctaattttaacctaaattcagtgtttgtttttactgtattgcccctgtttaaaatatcaaattg 35607119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 23274383 - 23274496
Alignment:
Q  58 ttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaaaatatcaaa 157  Q
    |||||||||||||| ||||||   ||  ||||||||| ||||||||||||||||||| ||| |||  |||||| ||||||||||| ||||||||||||||    
T  23274383 ttttatttattaaaattaacctgtattataattgttgtcctaattttaacctaaattcagtatttgcttttaccgtattacccctatttaaaatatcaaa 23274482  T
Q  158 ttgcataaatctcc 171  Q
    ||||| ||||||||    
T  23274483 ttgcagaaatctcc 23274496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 41844082 - 41843994
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||||||||||||||||||| || | ||| |||||||||||||||||||||||||   |||||  ||||||||||||||| ||||||||    
T  41844082 ttatttattaaagttaacccgaacggtaactgttgccctaattttaacctaaattctatgtttacttttactgtattacctctgtttaa 41843994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 14996396 - 14996342
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatct 55  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  14996396 cagtgcttacttttactgtattacccatgtttaaaatatcaaattgcagaaatct 14996342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 148
Target Start/End: Complemental strand, 41844285 - 41844193
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||||||||||| |  |||| ||||||||||||||||| |||||||   || ||  |||||||||||||||| |||||||    
T  41844285 tcttttatttattaaagttaacccatacactaactgttgccctaattttaatctaaattctatgcttacttttactgtattacccatgtttaa 41844193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 16914073 - 16913986
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||||||||||||||||||  |  ||||| |||||||||||||||||||||||||   || ||  ||||||||||||||||||||||||    
T  16914073 ttatttattaaagttaaccggac-gctaactgttgccctaattttaacctaaattatatgcttacttttactgtattacccctgtttaa 16913986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 41843927 - 41843839
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||||||||||| |||||||  | ||||| |||||||||||||||||||||||||   || ||  |||||||||||||||||| |||||    
T  41843927 ttatttattaaaattaacccggacgctaactgttgccctaattttaacctaaattatatgcttacttttactgtattacccctatttaa 41843839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 23274446 - 23274494
Alignment:
Q  7 ttgcttttactgtattacccgtgtttaaaatatcaaattgcagaaatct 55  Q
    |||||||||| ||||||||| | ||||||||||||||||||||||||||    
T  23274446 ttgcttttaccgtattacccctatttaaaatatcaaattgcagaaatct 23274494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 35606956 - 35607019
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttt 122  Q
    |||||||||||||||||||||||   ||||||| | |||| |||||||||||||||||| |||||||    
T  35606956 tcttttatttattaaagttaacc---atgctaacttttgctctaattttaacctaaattcagtgttt 35607019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 148
Target Start/End: Complemental strand, 14994123 - 14994037
Alignment:
Q  62 atttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||||||||||||||||  || | ||| ||||||| |||| ||||||||||||   | |||  ||||||| ||||||||||||||||    
T  14994123 atttattaaagttaacctgaacgataactgttgccttaatattaacctaaattatatatttacttttactatattacccctgtttaa 14994037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 35607074 - 35607124
Alignment:
Q  1 cagtgcttgcttttactgtattacccgtgtttaaaatatcaaattgcagaa 51  Q
    ||||| ||| |||||||||||| ||| ||||||||||||||||||| ||||    
T  35607074 cagtgtttgtttttactgtattgcccctgtttaaaatatcaaattgtagaa 35607124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 50; Significance: 1e-19; HSPs: 4)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 60 - 145
Target Start/End: Complemental strand, 13977 - 13892
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtt 145  Q
    ||||||||||||||||||||| | ||||| ||||||||||||||||| ||||||||  || ||  |||||||||||||||||||||    
T  13977 ttatttattaaagttaacccagacgctaactgttgccctaattttaaactaaattttatgcttacttttactgtattacccctgtt 13892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 13513 - 13425
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||||||| | ||||| | |||||||||||||||||||||||   || ||  ||||||||||||||||||||||||    
T  13513 ttatttattaaagttaacccagacgctaactattgccctaattttaacctaaattctatgcttacttttactgtattacccctgtttaa 13425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 13675 - 13587
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||||||  | ||||| ||||| | ||||||||||||||||||  || ||  |||||||||||||||||| |||||    
T  13675 ttatttattaaagttaacccggacgctaactgttgtcttaattttaacctaaattttatgcttacttttactgtattacccctatttaa 13587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 13823 - 13735
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||||||  |  |||| ||||| ||||||||||||||||||||  || ||  ||||||||||||||| ||||||||    
T  13823 ttatttattaaagttaacccggacactaactgttgtcctaattttaacctaaattttatgcttacttttactgtattacctctgtttaa 13735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 148
Target Start/End: Complemental strand, 9891 - 9799
Alignment:
Q  56 tcttttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||||||||||||||||||| ||| || | ||| |||||||||||||||||||||||||   || ||  ||||||||||||| || |||||||    
T  9891 tcttttatttattaaagttatcccgaaagttaactgttgccctaattttaacctaaattctatgcttacttttactgtattagccgtgtttaa 9799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 9732 - 9644
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaatttagtgttttgttttactgtattacccctgtttaa 148  Q
    ||||||||||||||||||||  | | ||| ||| | |||||||||||||||||||   || ||  ||||| ||||||||||||||||||    
T  9732 ttatttattaaagttaacccggacgttaactgtagtcctaattttaacctaaattctatgcttacttttaatgtattacccctgtttaa 9644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0891 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0891
Description:

Target: scaffold0891; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 2166 - 2077
Alignment:
Q  60 ttatttattaaagttaacccaaatgctaattgttgccctaattttaacctaaat-ttagtgttttgttttactgtattacccctgtttaa 148  Q
    |||||||||||||||||  || | |||||  ||||||||||||||||||||||| | | || ||  |||||||||||||||| |||||||    
T  2166 ttatttattaaagttaattcagacgctaaccgttgccctaattttaacctaaatctcaatgcttacttttactgtattacccttgtttaa 2077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University