View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4189_high_13 (Length: 242)
Name: NF4189_high_13
Description: NF4189
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4189_high_13 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 17 - 242
Target Start/End: Complemental strand, 32875653 - 32875428
Alignment:
| Q |
17 |
acaaacaatatttgtacataccaaagcttgcacttgttgttgctggaatatccgtcaccatcctgcaatttcgtttaagagggaagaataataacaaaag |
116 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32875653 |
acaaacaatagttgtacataccaaagcttgcacttgttgttgctggaatatccgtcaccatcctgcaatttcgtttaagagggaagaataataacaaaag |
32875554 |
T |
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| Q |
117 |
tatataagtctaaacaatttgatcttccatttacttttaattacacaattgcttttagttttaccaaagaaagagacaatataactcaccaatgcaagta |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32875553 |
tatataagtctaaacaatttgatcttccatttacttttaattacacaattgcttttagttttaccaaagaaagagacaatataactcaccaatgcaagta |
32875454 |
T |
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| Q |
217 |
ttccttcaaaaaagggttactagggc |
242 |
Q |
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|||||||||||||||||||||||||| |
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| T |
32875453 |
ttccttcaaaaaagggttactagggc |
32875428 |
T |
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