View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4189_low_21 (Length: 217)
Name: NF4189_low_21
Description: NF4189
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4189_low_21 |
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Alignment Details
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 40182160 - 40181972
Alignment:
| Q |
14 |
cagagataattcggcgataaaatttgttaagcactctagttgtagtgaagggacctgagcaatgcatatgaaaccaagaaaaaaggggtcaataatttag |
113 |
Q |
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| T |
40182160 |
cagagataattcggcgataaaatttgtcaagcactctagttgtagtgaagggacctgagcaatgcatatgaaaccaagaaaaaaggggtcaataatttag |
40182061 |
T |
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| Q |
114 |
aaatggaatcctaataattagagtcatgtgccataacatacaaatcaatgctatctcatcaaatgtgagaaatggaaatagtcataagt |
202 |
Q |
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| T |
40182060 |
aaatggaatcctaataattagagtcatgtgccataacatacaaatcaatgctatctcatcaaatgtgagaaatggaaatagtcataagt |
40181972 |
T |
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