View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4190_high_2 (Length: 568)
Name: NF4190_high_2
Description: NF4190
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4190_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 455; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 455; E-Value: 0
Query Start/End: Original strand, 17 - 529
Target Start/End: Original strand, 46412910 - 46413426
Alignment:
| Q |
17 |
ttatgttggtcacttaattaagtattgcgtgttccaaatatatggttctctctttcttacgattgcttgcatttgaaggaaattccacgttggccttatt |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46412910 |
ttatgttggtcacttaattaagtattgcgtgttccaaagatatggttctctctttcttacgattgcttgcatttgaaggaaattccacgttggccttatt |
46413009 |
T |
|
| Q |
117 |
tccttgtctccctctcttacacttcaatttccaacacacatggcaaatgagagttgaactaaaaatgaaccaacatcagtcatagaaaggcagagcagag |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46413010 |
tccttgtctccctctcttacacttcaatttccaacacacatggcaaatgagagttgaactaaaaatgaaccaacatcagtcatagaaaggcagagcagag |
46413109 |
T |
|
| Q |
217 |
cagagaatcccccactttctaaggcnnnnnnncttccacttcaagtgctgttttcctttgcttacttgctgcttagaacctcccattctcatcacgctat |
316 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
46413110 |
cagagaatcccccactttctaaggcaaaaaaacttccacttcaagtgctgttttcctttgcttacttgctgcttagaacctcccattctcctcacgctat |
46413209 |
T |
|
| Q |
317 |
ctcctattactttcacatttttacacaactcttactccactatcttcccttcctttcttgtccaaccctgtctctttgccaaagaatttactctgctgga |
416 |
Q |
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||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46413210 |
ctcctattactttcacatttttacacaactcttactccactgccatcccttcctttcttgtccaaccctgtctctttgccaaagaatttactctgctgga |
46413309 |
T |
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| Q |
417 |
aaggcaagtaccacttgattacatcatctttttcgtctgacatggtcaactacttcaaatgcc----tccaaataatctgatcaggggaataactgaaaa |
512 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |
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| T |
46413310 |
aaggcaagtaccacttgattacatcatctttttcgtctgacatggtcaactacttcaaatggctgtgtccaaataatctgatcaggggaataactgaaaa |
46413409 |
T |
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| Q |
513 |
ttgattaggactttaaa |
529 |
Q |
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||||||||||||||||| |
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| T |
46413410 |
ttgattaggactttaaa |
46413426 |
T |
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