View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4191_high_1 (Length: 534)
Name: NF4191_high_1
Description: NF4191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4191_high_1 |
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Alignment Details
Target: chr2 (Bit Score: 499; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 499; E-Value: 0
Query Start/End: Original strand, 10 - 516
Target Start/End: Original strand, 9956034 - 9956540
Alignment:
| Q |
10 |
gcacagatcaacccattacaaatctttgatgtaaacaaacatttgagagaagttttaaaattgcaagggactggtgaagccaaattacgatcatttaaag |
109 |
Q |
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| T |
9956034 |
gcacagatcaacccattacaaatcattgatgtaaacaaacatttgagagaagttttaaaattgcaagggactggtgaagccaaattacgatcatttaaag |
9956133 |
T |
|
| Q |
110 |
ttcaagatgagtcagtttgaccaaaagaatatgcgatgtggatgcttcaggttatactagcaaccggtatatagttctgttagtatcaatactcttgggg |
209 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9956134 |
ttcaagatgagtcagtttgaccaaaagaatatgtgatgtggatgcttcaggttatactagcaaccggtatatagttctgttagtatcaatactcttgggg |
9956233 |
T |
|
| Q |
210 |
gactccatatatttacaaatataagtcattgagggttctagactaaatattttgagacaaaagaagcagaagataaagtgctctagaaaagaacagaaaa |
309 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9956234 |
gactccatatatttacaaatataagtcattgagggttctagactaaatattttgagacaaaagaagcagaagataaagtgctctagaaaagaacagaaaa |
9956333 |
T |
|
| Q |
310 |
tattttcttactgcagcttgtaatagttaatttttggatctataccaaccactacagctccaacctgcagaagtgaactcgtcagttaacttcaagcagt |
409 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9956334 |
tattttcttactgcagcttgtaatagttaatttttggatctataccaaccactacagctccaacctgcagaagtgaactcgtcagttaacttcaagcagt |
9956433 |
T |
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| Q |
410 |
gatctcaacgaagttactcaaagtaacaatgggcaaggtgttacattacactcttatcatgttcaaaaaagccgttctgcttccagtctattgttttatc |
509 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9956434 |
gatctcaacgaagttactcaaagtaacaatgggcaaggtgttacattacactcttatcatgttcaaaaaagccgttctgcttccagtctattgttttatc |
9956533 |
T |
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| Q |
510 |
cgcatct |
516 |
Q |
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||||||| |
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| T |
9956534 |
cgcatct |
9956540 |
T |
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