View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4193_high_21 (Length: 355)
Name: NF4193_high_21
Description: NF4193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4193_high_21 |
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Alignment Details
Target: chr2 (Bit Score: 328; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 1 - 340
Target Start/End: Original strand, 2755952 - 2756291
Alignment:
| Q |
1 |
tttgttatggtggcttctcaaacgcaccactttagccctttgaaagaattccattcccacctaaattgaatcaaaatggaggtgcagaaacttgattgat |
100 |
Q |
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| T |
2755952 |
tttgttatggtggcttctcaaacgaaccactttagccctttgaaagaattccattcccacctaaattgaatcaaaatggaggtgcagaaacttgattgat |
2756051 |
T |
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| Q |
101 |
cgatgagtttcaaaatatgtataaggatattgtgatgcacaaattatttggaaatgtgaggttgaatttgagaaggaacgtttaggcatgaaaaaagagg |
200 |
Q |
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| T |
2756052 |
cgatgagtttcaaaatatgtataaggatattgtgatgcacaaattatttggaaatgtggggttgaatttgagaaggaaagtttaggcatgaaaaaagagg |
2756151 |
T |
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| Q |
201 |
caatattatgatgaactaaaatatttgttttcatatacgtgttgattacgaatgatagaagcgtatgcctagaattagagtattggttataaaaatagga |
300 |
Q |
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| T |
2756152 |
caatattatgatgaactaaaatatttgttttcatatacgtgttgattacgaatgatagaagcgtatgcctagaattagagtattggttataaaaatagga |
2756251 |
T |
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| Q |
301 |
gaaagagaatttataaacagaaatgagtgactaataattt |
340 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
2756252 |
gaaagagaatttataaacagaaatgagtgactaataattt |
2756291 |
T |
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