View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4193_high_28 (Length: 326)
Name: NF4193_high_28
Description: NF4193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4193_high_28 |
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Alignment Details
Target: chr4 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 12 - 309
Target Start/End: Original strand, 884232 - 884526
Alignment:
| Q |
12 |
acagataagacatgtatataaatagaaaaacaatagatatttgttacattgtcatggtttgtataatgcatgtaatacatgtaaatatcttacctagttt |
111 |
Q |
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| T |
884232 |
acagataagacatgtatataaatagaaaaacaatagatatttgttacattgtcatgttttgtataatgcatgtaatacatgtaaatatcttacctagttt |
884331 |
T |
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| Q |
112 |
gtataatgcaattagttaggtctaatttataattcctaatatgtgtgatactcattccggattcgtagctttctattacccatgcatgtctcagacaaat |
211 |
Q |
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| T |
884332 |
gtataatgcaattagttaggtctaatttataattcctaatatgtgtgatactcattccagattcgtagctttctattacccatgcatgtctcagacaagt |
884431 |
T |
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| Q |
212 |
atcttacacaaccaaccaacacagatttcatttgacatatatctgttacttattctccttatcaatatattgatga---tattaatccatgtgatggtac |
308 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |
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| T |
884432 |
atcttacacaaccaaccaacacagatttcatttgac----atctgttacttattctccttatca--atattgatgatattattaatccatgtgatggtac |
884525 |
T |
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