View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4193_low_18 (Length: 382)

Name: NF4193_low_18
Description: NF4193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4193_low_18
NF4193_low_18
[»] chr8 (5 HSPs)
chr8 (1-379)||(29490094-29490473)
chr8 (296-364)||(21136605-21136673)
chr8 (279-334)||(5840354-5840409)
chr8 (273-344)||(10028887-10028958)
chr8 (296-344)||(23768777-23768825)
[»] chr3 (5 HSPs)
chr3 (255-335)||(49547724-49547804)
chr3 (265-376)||(20124225-20124335)
chr3 (279-351)||(45965674-45965746)
chr3 (309-362)||(42045897-42045950)
chr3 (279-351)||(39840660-39840732)
[»] chr1 (9 HSPs)
chr1 (249-378)||(38783863-38783992)
chr1 (255-363)||(38576551-38576659)
chr1 (282-351)||(15395197-15395266)
chr1 (281-374)||(27293283-27293376)
chr1 (279-351)||(28504712-28504784)
chr1 (279-334)||(10377569-10377624)
chr1 (280-330)||(23399764-23399814)
chr1 (298-351)||(46410665-46410718)
chr1 (256-344)||(46410836-46410924)
[»] chr6 (10 HSPs)
chr6 (280-346)||(19121996-19122062)
chr6 (255-376)||(17437710-17437832)
chr6 (255-347)||(22017772-22017864)
chr6 (282-364)||(3729177-3729259)
chr6 (296-363)||(8446961-8447028)
chr6 (296-363)||(8455765-8455832)
chr6 (280-351)||(34293531-34293602)
chr6 (258-351)||(34583174-34583266)
chr6 (258-334)||(9530527-9530603)
chr6 (294-346)||(26330327-26330379)
[»] chr5 (9 HSPs)
chr5 (267-364)||(36184729-36184826)
chr5 (255-351)||(11243232-11243325)
chr5 (248-351)||(11275628-11275731)
chr5 (255-341)||(1862384-1862470)
chr5 (249-363)||(12640206-12640319)
chr5 (250-376)||(39643233-39643358)
chr5 (255-336)||(11275809-11275890)
chr5 (318-367)||(27354412-27354461)
chr5 (284-332)||(36184522-36184570)
[»] chr7 (4 HSPs)
chr7 (256-346)||(3248298-3248388)
chr7 (282-367)||(35660957-35661042)
chr7 (298-346)||(3248449-3248497)
chr7 (290-362)||(26752010-26752082)
[»] chr4 (11 HSPs)
chr4 (279-351)||(13119387-13119459)
chr4 (279-370)||(55264398-55264489)
chr4 (258-351)||(55397376-55397469)
chr4 (280-340)||(39051105-39051165)
chr4 (279-346)||(39493625-39493691)
chr4 (296-351)||(44137407-44137462)
chr4 (255-329)||(13302232-13302305)
chr4 (313-367)||(49448246-49448300)
chr4 (298-351)||(40942681-40942734)
chr4 (298-334)||(21782156-21782192)
chr4 (279-367)||(39051318-39051405)
[»] chr2 (5 HSPs)
chr2 (255-335)||(39760403-39760483)
chr2 (255-347)||(44327880-44327972)
chr2 (255-366)||(22191504-22191616)
chr2 (279-334)||(6511018-6511073)
chr2 (318-363)||(32502937-32502982)
[»] scaffold0154 (1 HSPs)
scaffold0154 (296-351)||(6226-6281)
[»] scaffold0050 (1 HSPs)
scaffold0050 (255-332)||(81943-82020)
[»] scaffold0340 (2 HSPs)
scaffold0340 (299-351)||(10894-10946)
scaffold0340 (246-363)||(10998-11115)
[»] scaffold0022 (1 HSPs)
scaffold0022 (296-351)||(122547-122602)
[»] scaffold0360 (1 HSPs)
scaffold0360 (280-334)||(4796-4850)


Alignment Details
Target: chr8 (Bit Score: 328; Significance: 0; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 1 - 379
Target Start/End: Original strand, 29490094 - 29490473
Alignment:
Q  1 ttcaaagcaatttcatttcctatactgtactaagttgtactaatatcaattataaaaagaaaaagataatttagaataagattacttgatccaatttgtg 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29490094 ttcaaagcaatttcatttcctatattgtactaagttgtactaatatcaattataaaaagaaaaagataatttagaataagattactcgatccaatttgtg 29490193  T
Q  101 ttagaaaaaactcattaagttgggggttctttaaaccccgcatttacaaaaattcacgtgtttttgaaggaaataatttatccaaaaaacttgtaaagac 200  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29490194 ttagaaaaaactcataaagttgggggttctttaaaccccgcatttacaaaaattcacgtgtttttgaaggaaataatttatccaaaaaactggtaaagac 29490293  T
Q  201 ataaaattttacaatttaactccaaagtccaaatgtttggttaataataaaatggagtaaaccataaatttggtcttagtc-tttgtaaatcactatcaa 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||| ||||||||||    
T  29490294 ataaaattttacaatttaactccaaagtccaaatgtttggttaataataaaatggagtaaaccataaatttcgtctcagtcttttgtaagtcactatcaa 29490393  T
Q  300 attagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaaccttttcaattagatctctgtctctgtg 379  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  29490394 attagtctatgattatattaatattttaaaatagtttttgtctttgtaaaaagtttctcaattagatctctgtctctgtg 29490473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 21136605 - 21136673
Alignment:
Q  296 tcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaaccttttcaattag 364  Q
    |||||||||||| ||| | ||||||||||||||||||||  || ||||||| ||||  |||||||||||    
T  21136605 tcaaattagtctttgactctattaatatttcaaaatagtccttatctttgtcaaaagtttttcaattag 21136673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 279 - 334
Target Start/End: Original strand, 5840354 - 5840409
Alignment:
Q  279 gtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagt 334  Q
    |||||||||| | ||| |||||||||||| ||||| ||||||||||| ||||||||    
T  5840354 gtctttgtaagttactctcaaattagtctctgattctattaatattttaaaatagt 5840409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 344
Target Start/End: Complemental strand, 10028958 - 10028887
Alignment:
Q  273 gtcttagtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtcttt 344  Q
    ||||| |||||||||  ||||| |||||||||||| ||| | ||||||||||||||| ||||  ||||||||    
T  10028958 gtctttgtctttgtaggtcactctcaaattagtctttgactttattaatatttcaaactagtcgttgtcttt 10028887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 344
Target Start/End: Original strand, 23768777 - 23768825
Alignment:
Q  296 tcaaattagtctatgattatattaatatttcaaaatagtttttgtcttt 344  Q
    |||||||||||||| ||| ||||||||||| |||||||| | |||||||    
T  23768777 tcaaattagtctataattttattaatattttaaaatagtctctgtcttt 23768825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 6e-19; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 255 - 335
Target Start/End: Complemental strand, 49547804 - 49547724
Alignment:
Q  255 gagtaaaccataaatttggtcttagtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtt 335  Q
    |||||||| || ||||||||||  ||||||||| |||||| ||||||||||| |||||||||||||||||||||| |||||    
T  49547804 gagtaaactattaatttggtctctgtctttgtacatcactctcaaattagtccatgattatattaatatttcaaactagtt 49547724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 376
Target Start/End: Complemental strand, 20124335 - 20124225
Alignment:
Q  265 taaatttggtcttagtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaaccttttcaattag 364  Q
    ||||||||||||  |||||||||| ||| | |||||||||||| ||| | ||| ||||||||||||||||  |||| ||||| ||||  |||||||||||    
T  20124335 taaatttggtctctgtctttgtaagtcatt-tcaaattagtctctgactctatcaatatttcaaaatagtcattgtttttgtcaaaagtttttcaattag 20124237  T
Q  365 atctctgtctct 376  Q
    |||  |||||||    
T  20124236 atccatgtctct 20124225  T

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Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 351
Target Start/End: Original strand, 45965674 - 45965746
Alignment:
Q  279 gtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaa 351  Q
    |||||||||| || || |||||||| ||| ||||| |||||||||||||| |||||  |||||||||| ||||    
T  45965674 gtctttgtaagtcgctctcaaattaatctctgattctattaatatttcaatatagtccttgtctttgttaaaa 45965746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 362
Target Start/End: Complemental strand, 42045950 - 42045897
Alignment:
Q  309 tgattatattaatatttcaaaatagtttttgtctttgtaaaaaccttttcaatt 362  Q
    ||||| |||||||||||||||||||| | ||||||||| ||||  |||||||||    
T  42045950 tgattctattaatatttcaaaatagtatatgtctttgtcaaaagtttttcaatt 42045897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 351
Target Start/End: Original strand, 39840660 - 39840732
Alignment:
Q  279 gtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaa 351  Q
    |||||||||| | | | |||||||||||| ||| | ||||||||||||||||||||  |||| ||||| ||||    
T  39840660 gtctttgtaagtgattctcaaattagtctctgactctattaatatttcaaaatagtcattgtttttgtcaaaa 39840732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 249 - 378
Target Start/End: Original strand, 38783863 - 38783992
Alignment:
Q  249 aaaatggagtaaaccataaatttggtcttagtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaa 348  Q
    |||| |||||||||||| | |||| ||||  ||||||||| ||||| ||||||||||| |||| | ||||||||||| ||||||||  |||||||||| |    
T  38783863 aaaaaggagtaaaccatcagtttgatctttatctttgtaagtcactttcaaattagtccatgactctattaatattttaaaatagtcattgtctttgtca 38783962  T
Q  349 aaaccttttcaattagatctctgtctctgt 378  Q
    |||  || | |||||||||  |||||||||    
T  38783963 aaagtttcttaattagatcattgtctctgt 38783992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 255 - 363
Target Start/End: Original strand, 38576551 - 38576659
Alignment:
Q  255 gagtaaaccataaatttggtcttagtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaacct 354  Q
    |||||||| || || |||||| |  ||||||||||||| | |||||||||||| ||||| |||||||||||||||  ||| | ||||||| | ||||  |    
T  38576551 gagtaaacaattaaattggtccttatctttgtaaatcattctcaaattagtctttgattctattaatatttcaaaccagtctctgtctttatcaaaagat 38576650  T
Q  355 tttcaatta 363  Q
    |||||||||    
T  38576651 tttcaatta 38576659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 351
Target Start/End: Original strand, 15395197 - 15395266
Alignment:
Q  282 tttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaa 351  Q
    ||||||||| | | |||||||||||||||| | ||||||||||| |||||||| | ||||||||| ||||    
T  15395197 tttgtaaatgattctcaaattagtctatgactctattaatattttaaaatagtctctgtctttgttaaaa 15395266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 374
Target Start/End: Original strand, 27293283 - 27293376
Alignment:
Q  281 ctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaaccttttcaattagatctctgtct 374  Q
    |||||||||||| | |||||||||||| ||| | ||||||||||||||| ||||| || ||||||  ||||  || |||||||| ||| |||||    
T  27293283 ctttgtaaatcattctcaaattagtctctgactctattaatatttcaaattagttcttatctttgccaaaagtttctcaattaggtctttgtct 27293376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 351
Target Start/End: Original strand, 28504712 - 28504784
Alignment:
Q  279 gtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaa 351  Q
    |||||||||| ||| | |||||||||||||||| | ||||||||||||||| |||| | ||| ||||| ||||    
T  28504712 gtctttgtaagtcattctcaaattagtctatgactctattaatatttcaaactagtctctgtttttgtcaaaa 28504784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 279 - 334
Target Start/End: Complemental strand, 10377624 - 10377569
Alignment:
Q  279 gtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagt 334  Q
    |||||||||| ||| |||||||||||||| ||| | ||||||||||||||| ||||    
T  10377624 gtctttgtaagtcattatcaaattagtctttgactctattaatatttcaaattagt 10377569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 23399814 - 23399764
Alignment:
Q  280 tctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaa 330  Q
    |||||||||||| || |||||||||||||| ||| ||||||| ||||||||    
T  23399814 tctttgtaaatccctctcaaattagtctataattctattaatttttcaaaa 23399764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 351
Target Start/End: Original strand, 46410665 - 46410718
Alignment:
Q  298 aaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaa 351  Q
    ||||||||| |||| |||||||||||||||||||||| |  |||||||| ||||    
T  46410665 aaattagtccatgaatatattaatatttcaaaatagtctcagtctttgtcaaaa 46410718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 344
Target Start/End: Complemental strand, 46410924 - 46410836
Alignment:
Q  256 agtaaaccataaatttggtcttagtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtcttt 344  Q
    |||||||||  || |||||| | |||||||||| | | | |||| ||||||||||| | || ||||||||||||||||| | |||||||    
T  46410924 agtaaaccaccaaattggtcattgtctttgtaagtgattctcaatttagtctatgactctaataatatttcaaaatagtctctgtcttt 46410836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 346
Target Start/End: Complemental strand, 19122062 - 19121996
Alignment:
Q  280 tctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgt 346  Q
    ||||||||| ||||| |||||||||||||||| | ||||||||||||||| |||||| |||||||||    
T  19122062 tctttgtaagtcactttcaaattagtctatgactctattaatatttcaaactagtttatgtctttgt 19121996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 376
Target Start/End: Complemental strand, 17437832 - 17437710
Alignment:
Q  255 gagtaaaccataaatttggtcttagtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaa-tagtttttgtctttgtaaaaacc 353  Q
    |||||||| || |||||||| |   ||||||||| ||||| | ||| |||||||| | | |||||||||||||||| |||||| ||||||||| ||||      
T  17437832 gagtaaactatcaatttggtttctatctttgtaattcactctaaaaatagtctattactctattaatatttcaaaaatagtttctgtctttgttaaaagt 17437733  T
Q  354 ttttcaattagatctctgtctct 376  Q
    || |||||||||||| |||||||    
T  17437732 ttctcaattagatctttgtctct 17437710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 255 - 347
Target Start/End: Original strand, 22017772 - 22017864
Alignment:
Q  255 gagtaaaccataaatttggtcttagtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgta 347  Q
    ||||||||||| |||||||||||  ||||||||| | | ||||||||||||  || ||| ||||||||||| |||||| |  |||||||||||    
T  22017772 gagtaaaccatcaatttggtctttatctttgtaagtgattatcaaattagttcataattttattaatattttaaaataatcattgtctttgta 22017864  T

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Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 364
Target Start/End: Original strand, 3729177 - 3729259
Alignment:
Q  282 tttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaaccttttcaattag 364  Q
    ||||||| ||| ||||||||||||  |||| ||||||||||||||||| |||| | ||| ||||| ||||  |||||||||||    
T  3729177 tttgtaagtcaatatcaaattagttcatgaatatattaatatttcaaactagtatatgtttttgtcaaaagtttttcaattag 3729259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 296 - 363
Target Start/End: Original strand, 8446961 - 8447028
Alignment:
Q  296 tcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaaccttttcaatta 363  Q
    |||||||||||  ||||| ||||||||||||||||||||   ||||||||| ||||  ||||||||||    
T  8446961 tcaaattagtcactgattctattaatatttcaaaatagtcaatgtctttgttaaaagtttttcaatta 8447028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 296 - 363
Target Start/End: Original strand, 8455765 - 8455832
Alignment:
Q  296 tcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaaccttttcaatta 363  Q
    |||||||||||  ||||| ||||||||||||||||||||   ||||||||| ||||  ||||||||||    
T  8455765 tcaaattagtcactgattctattaatatttcaaaatagtcaatgtctttgttaaaagtttttcaatta 8455832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 280 - 351
Target Start/End: Complemental strand, 34293602 - 34293531
Alignment:
Q  280 tctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaa 351  Q
    |||| |||| |||||||||||||| || | |||||||||||||||| ||| || |||| || ||||||||||    
T  34293602 tcttcgtaagtcactatcaaattaatccacgattatattaatattttaaattaattttcgtgtttgtaaaaa 34293531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 34583174 - 34583266
Alignment:
Q  258 taaaccataaatttggtcttagtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaa 351  Q
    |||||||| || ||| |||  |||||| ||| ||||||||||||||||| |  ||| |||| ||||||||||||||| ||||| ||||| ||||    
T  34583174 taaaccatcaaattgttctatgtctttataagtcactatcaaattagtcca-cattttattcatatttcaaaatagtatttgtttttgtcaaaa 34583266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 334
Target Start/End: Original strand, 9530527 - 9530603
Alignment:
Q  258 taaaccataaatttggtcttagtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagt 334  Q
    |||||||| || |||||||  |||||||||| ||| | |||||||||||| | | | ||||||||||||||| ||||    
T  9530527 taaaccattaaattggtctctgtctttgtaagtcattctcaaattagtctctaactttattaatatttcaaactagt 9530603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 26330379 - 26330327
Alignment:
Q  294 tatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgt 346  Q
    |||||||||||||  ||| | ||||||||||| ||||||||| ||||||||||    
T  26330379 tatcaaattagtcattgactctattaatattttaaaatagttgttgtctttgt 26330327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 267 - 364
Target Start/End: Complemental strand, 36184826 - 36184729
Alignment:
Q  267 aatttggtcttagtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaaccttttcaattag 364  Q
    |||||||| || |||||||||||||||| |||||||||||| | | | ||||| ||||||||||||||   ||||||||| ||||  |||||||||||    
T  36184826 aatttggtatttgtctttgtaaatcactctcaaattagtctctaactctattagtatttcaaaatagtcactgtctttgtcaaaagtttttcaattag 36184729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 351
Target Start/End: Original strand, 11243232 - 11243325
Alignment:
Q  255 gagtaaaccataaatttggtcttagtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaa 351  Q
    ||||||||||| ||||| ||||   ||||| ||||||||| |||||||||||   |||||||||||||||| ||||||||  ||||||||| |||||    
T  11243232 gagtaaaccatcaatttagtctctatctttataaatcactttcaaattagtc---gattatattaatattttaaaatagtccttgtctttgcaaaaa 11243325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 351
Target Start/End: Original strand, 11275628 - 11275731
Alignment:
Q  248 taaaatggagtaaaccataaatttggtcttagtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgta 347  Q
    ||||| ||||||||| || || |||||| | ||||||||| |||| | | ||||||||| |||||| |||||||||||  || |||| |||||||||||     
T  11275628 taaaaaggagtaaactatcaaattggtcatcgtctttgtagatcattctaaaattagtccatgattttattaatattttcaactagtctttgtctttgtc 11275727  T
Q  348 aaaa 351  Q
    ||||    
T  11275728 aaaa 11275731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 341
Target Start/End: Complemental strand, 1862470 - 1862384
Alignment:
Q  255 gagtaaaccataaatttggtcttagtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtc 341  Q
    ||||||||||| |||||| ||   |||||||| | | | |||||||||||||| ||| | |||||||||||||||| ||| ||||||    
T  1862470 gagtaaaccatcaatttgttcactgtctttgtcagtgattatcaaattagtctttgactctattaatatttcaaaacagtctttgtc 1862384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 363
Target Start/End: Complemental strand, 12640319 - 12640206
Alignment:
Q  249 aaaatggagtaaaccataaatttggtcttagtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaa 348  Q
    ||||||||||||||||| || ||||||   |||||||||| | | | |||||||||||  ||| | |||||||| ||||||||||| ||||  ||||| |    
T  12640319 aaaatggagtaaaccatcaaattggtccctgtctttgtaagtgattctcaaattagtcactgaatctattaata-ttcaaaatagtctttgattttgtca 12640221  T
Q  349 aaaccttttcaatta 363  Q
    |||  ||||||||||    
T  12640220 aaagtttttcaatta 12640206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 376
Target Start/End: Complemental strand, 39643358 - 39643233
Alignment:
Q  250 aaatggagtaaaccataaatttggtcttagtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaa 349  Q
    |||| ||||||||||  ||||||||| | |||||  ||| ||||| |||||||| || | || |  |||||||||||||||||||  |||| ||||| ||    
T  39643358 aaatagagtaaaccaccaatttggtcattgtctta-taagtcactctcaaattaatccacgactccattaatatttcaaaatagtcattgtttttgtcaa 39643260  T
Q  350 aaccttttcaattagatctctgtctct 376  Q
    ||  ||||||||||||| | |||||||    
T  39643259 aagtttttcaattagatttatgtctct 39643233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 11275890 - 11275809
Alignment:
Q  255 gagtaaaccataaatttggtcttagtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagttt 336  Q
    ||||||||||| || ||| ||   |||||||||||||| | |||||||||||| ||| | ||||||||||| ||| ||||||    
T  11275890 gagtaaaccattaaattgttccatgtctttgtaaatcattctcaaattagtctctgactttattaatattttaaattagttt 11275809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 367
Target Start/End: Complemental strand, 27354461 - 27354412
Alignment:
Q  318 taatatttcaaaatagtttttgtctttgtaaaaaccttttcaattagatc 367  Q
    |||||||| |||||||||||||||||||| ||||  || |||||||||||    
T  27354461 taatatttgaaaatagtttttgtctttgtcaaaagtttatcaattagatc 27354412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 332
Target Start/End: Original strand, 36184522 - 36184570
Alignment:
Q  284 tgtaaatcactatcaaattagtctatgattatattaatatttcaaaata 332  Q
    ||||| ||||| |||||||||||||| | | ||||||||||||||||||    
T  36184522 tgtaagtcactctcaaattagtctataactttattaatatttcaaaata 36184570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 256 - 346
Target Start/End: Original strand, 3248298 - 3248388
Alignment:
Q  256 agtaaaccataaatttggtcttagtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgt 346  Q
    |||||||||| || |||||||| ||||||||||  | || |||||||||| | ||| | ||||||||| |||||||||||| |||||||||    
T  3248298 agtaaaccattaaattggtctttgtctttgtaacccgctctcaaattagtatctgactttattaatatctcaaaatagtttctgtctttgt 3248388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 367
Target Start/End: Complemental strand, 35661042 - 35660957
Alignment:
Q  282 tttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaaccttttcaattagatc 367  Q
    ||||||| ||| |||||||||| |||  |||| ||||||||||||||| ||||| |||||||||| ||||  || |||||||||||    
T  35661042 tttgtaagtcattatcaaattactcttcgattctattaatatttcaaattagttcttgtctttgttaaaagtttctcaattagatc 35660957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 346
Target Start/End: Complemental strand, 3248497 - 3248449
Alignment:
Q  298 aaattagtctatgattatattaatatttcaaaatagtttttgtctttgt 346  Q
    |||||||||| ||| ||||||||||| |||||||||| | |||||||||    
T  3248497 aaattagtctttgactatattaatatgtcaaaatagtctctgtctttgt 3248449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 362
Target Start/End: Complemental strand, 26752082 - 26752010
Alignment:
Q  290 tcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaaccttttcaatt 362  Q
    ||||| |||||||||||| ||| | | ||| ||||| |||||||| ||||||||||| ||||  |||||||||    
T  26752082 tcactctcaaattagtctctgactttgttattattttaaaatagtctttgtctttgtcaaaagtttttcaatt 26752010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000009; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 279 - 351
Target Start/End: Complemental strand, 13119459 - 13119387
Alignment:
Q  279 gtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaa 351  Q
    |||||||||||| | |||||||||||| ||||| | ||||||||||||||||||||   ||||||||| ||||    
T  13119459 gtctttgtaaatgattatcaaattagtttatgactctattaatatttcaaaatagtccctgtctttgttaaaa 13119387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 370
Target Start/End: Original strand, 55264398 - 55264489
Alignment:
Q  279 gtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaaccttttcaattagatctct 370  Q
    |||||| ||| ||||| |||| ||||||  ||| | ||||||||||||||||||||  |||||||||| ||||  |||||||||| ||||||    
T  55264398 gtctttataagtcactttcaatttagtcactgactctattaatatttcaaaatagtcattgtctttgtcaaaagtttttcaattaaatctct 55264489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 55397376 - 55397469
Alignment:
Q  258 taaaccataaatttggtcttagtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaa 351  Q
    |||||||| ||||||||| |  ||||| ||||||| | |||||||| |||  || | ||||||||||| |||||||||||| ||||||| ||||    
T  55397376 taaaccatcaatttggtcattctctttctaaatcattctcaaattaatcttcgactttattaatattttaaaatagtttttatctttgttaaaa 55397469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 340
Target Start/End: Original strand, 39051105 - 39051165
Alignment:
Q  280 tctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgt 340  Q
    ||||||||| ||||| |||||||||||  ||||| ||||||||||| |||||||| |||||    
T  39051105 tctttgtaagtcactctcaaattagtcattgattctattaatattttaaaatagtctttgt 39051165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 279 - 346
Target Start/End: Original strand, 39493625 - 39493691
Alignment:
Q  279 gtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgt 346  Q
    |||||||||| ||||| |||||||||||  ||||| |||||||| |||||| |||| |||||||||||    
T  39493625 gtctttgtaagtcactttcaaattagtcgttgattttattaata-ttcaaattagtatttgtctttgt 39493691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 296 - 351
Target Start/End: Original strand, 44137407 - 44137462
Alignment:
Q  296 tcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaa 351  Q
    |||||||||||| ||| | |||||||||||||||||||| | ||||||||| ||||    
T  44137407 tcaaattagtctctgactctattaatatttcaaaatagtatctgtctttgtcaaaa 44137462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 329
Target Start/End: Complemental strand, 13302305 - 13302232
Alignment:
Q  255 gagtaaaccataaatttggtcttagtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaa 329  Q
    |||||||||||||||| ||||   |||||||||| ||||| |||||||||||   |||| |||||||||||||||    
T  13302305 gagtaaaccataaatt-ggtccccgtctttgtaagtcactctcaaattagtcctcgattctattaatatttcaaa 13302232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 313 - 367
Target Start/End: Complemental strand, 49448300 - 49448246
Alignment:
Q  313 tatattaatatttcaaaatagtttttgtctttgtaaaaaccttttcaattagatc 367  Q
    ||||||||||||||||| |||| ||||||||||| ||||  || |||||||||||    
T  49448300 tatattaatatttcaaactagtctttgtctttgtcaaaagtttatcaattagatc 49448246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 351
Target Start/End: Complemental strand, 40942734 - 40942681
Alignment:
Q  298 aaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaa 351  Q
    |||||||||||||| ||||||||||||| ||| |||| ||||| ||||| ||||    
T  40942734 aaattagtctatgactatattaatattttaaattagtctttgtttttgtcaaaa 40942681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 334
Target Start/End: Original strand, 21782156 - 21782192
Alignment:
Q  298 aaattagtctatgattatattaatatttcaaaatagt 334  Q
    ||||||||||| || ||||||||||||||||||||||    
T  21782156 aaattagtctacgactatattaatatttcaaaatagt 21782192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 367
Target Start/End: Complemental strand, 39051405 - 39051318
Alignment:
Q  279 gtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaaccttttcaattagatc 367  Q
    |||||| ||||||||| | |||||||| ||||| | ||||||||||| ||||||||   ||||||||| ||||  || |||||||||||    
T  39051405 gtctttataaatcacttttaaattagt-tatgactctattaatattttaaaatagtcactgtctttgtcaaaagtttctcaattagatc 39051318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000009; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 255 - 335
Target Start/End: Complemental strand, 39760483 - 39760403
Alignment:
Q  255 gagtaaaccataaatttggtcttagtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtt 335  Q
    ||||||||||| || |||||||   ||||||||| | | | ||||||||||| |||| |||||||||||||||||||||||    
T  39760483 gagtaaaccattaaattggtctctatctttgtaagtgattctcaaattagtccatgactatattaatatttcaaaatagtt 39760403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 255 - 347
Target Start/End: Original strand, 44327880 - 44327972
Alignment:
Q  255 gagtaaaccataaatttggtcttagtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgta 347  Q
    ||||||||||| |||||||||||  ||||||||| | | ||||||||||||  || ||| ||||||||||| |||||| |  |||||||||||    
T  44327880 gagtaaaccatcaatttggtctttatctttgtaagtgattatcaaattagttcataattttattaatattttaaaataatcattgtctttgta 44327972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 366
Target Start/End: Complemental strand, 22191616 - 22191504
Alignment:
Q  255 gagtaaaccataaatttggtcttagtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtc-tttgtaaaaacc 353  Q
    ||||||||||  |||||| || | | |||||||| ||||| |||||||||||  ||| | ||||||||||| |||||||| | |||| ||||| ||||      
T  22191616 gagtaaaccaccaatttgatccttgcctttgtaagtcactctcaaattagtccctgactctattaatattttaaaatagtctatgtcttttgttaaaagt 22191517  T
Q  354 ttttcaattagat 366  Q
    |||||||||||||    
T  22191516 ttttcaattagat 22191504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 279 - 334
Target Start/End: Original strand, 6511018 - 6511073
Alignment:
Q  279 gtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagt 334  Q
    |||||| ||| ||| | |||||||||||||||||| | ||||||||||||||||||    
T  6511018 gtctttataagtcattttcaaattagtctatgattctgttaatatttcaaaatagt 6511073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 32502982 - 32502937
Alignment:
Q  318 taatatttcaaaatagtttttgtctttgtaaaaaccttttcaatta 363  Q
    ||||||||||||||||| ||||||||||| ||||  ||||||||||    
T  32502982 taatatttcaaaatagtctttgtctttgtcaaaattttttcaatta 32502937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 351
Target Start/End: Complemental strand, 6281 - 6226
Alignment:
Q  296 tcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaa 351  Q
    |||||||||||| ||| | ||||||||||||||||||||||||| |||||| ||||    
T  6281 tcaaattagtctttgactctattaatatttcaaaatagtttttgcctttgttaaaa 6226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 332
Target Start/End: Original strand, 81943 - 82020
Alignment:
Q  255 gagtaaaccataaatttggtcttagtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaata 332  Q
    ||||||||||| ||||||||||| || |||||||  |||| |||||||||||  ||| | |||||||||||| |||||    
T  81943 gagtaaaccatcaatttggtctttgtatttgtaagacactctcaaattagtcattgactctattaatatttccaaata 82020  T

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Target: scaffold0340 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 351
Target Start/End: Original strand, 10894 - 10946
Alignment:
Q  299 aattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaa 351  Q
    ||||||||||||||| ||||||||||| |||||||||| | ||||||| ||||    
T  10894 aattagtctatgattttattaatattttaaaatagtttatatctttgtcaaaa 10946  T

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Target: scaffold0340; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 363
Target Start/End: Complemental strand, 11115 - 10998
Alignment:
Q  246 aataaaatggagtaaaccataaatttggtcttagtctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagtttttgtctttg 345  Q
    |||||||  ||||||||||| |  |||||||  ||||| |||| | | | ||||||||||| |||| | ||||||||| | |||||||| |||||||||     
T  11115 aataaaaatgagtaaaccattatattggtctctgtcttggtaagtgattctcaaattagtccatgaatttattaatatcttaaaatagtctttgtcttta 11016  T
Q  346 taaaaaccttttcaatta 363  Q
    | ||||  ||||||||||    
T  11015 tcaaaagtttttcaatta 10998  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 296 - 351
Target Start/End: Complemental strand, 122602 - 122547
Alignment:
Q  296 tcaaattagtctatgattatattaatatttcaaaatagtttttgtctttgtaaaaa 351  Q
    |||||||||||| ||| | ||||||||||||||| |||| ||||||||||| ||||    
T  122602 tcaaattagtctctgactctattaatatttcaaactagtctttgtctttgtcaaaa 122547  T

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Target: scaffold0360 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 4850 - 4796
Alignment:
Q  280 tctttgtaaatcactatcaaattagtctatgattatattaatatttcaaaatagt 334  Q
    ||||||||||| | | |||||||||||| ||||| ||||||||||| ||||||||    
T  4850 tctttgtaaattattctcaaattagtctctgattctattaatattttaaaatagt 4796  T

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