View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4193_low_23 (Length: 349)
Name: NF4193_low_23
Description: NF4193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4193_low_23 |
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Alignment Details
Target: chr8 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 14 - 334
Target Start/End: Complemental strand, 41723221 - 41722901
Alignment:
| Q |
14 |
atcatatttaagccattttattttgataatgcannnnnnngggactaaaattgtaaaagttgctatactcattggagtactttaataatttgacatgctt |
113 |
Q |
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| T |
41723221 |
atcatatttaagccattttatttttataatgcatttttttgggactaaaattgtgaaagttgctatactcattggagtactttaataatttgacatgctt |
41723122 |
T |
|
| Q |
114 |
tttgatattgaaatctgtctgcagtgtttgagaccgtagtatttgtaagtttgtttggatagaggaaagccataaatcatccaatggtgtgacccgtttg |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41723121 |
tttgatattgaaatctgtctgcagtgtttgagaccgtagtatttgtaagtttgtttggatagaggaaagccataaatcatccaatggtgtgacccgtttg |
41723022 |
T |
|
| Q |
214 |
tgtttgggaaaaacatgtaggaacaactttgttcataatcatatgaaaatgtttcaacatttagttcattgttttgaatgaaagtttgatgtgtgccaat |
313 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41723021 |
tgtttgggaaagacatgtaggaacaactttgttcataatcatatgaaaatgtttcaacatttagttcattgttttgaatgaaagtttgatgtgtgccaat |
41722922 |
T |
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| Q |
314 |
ttggtggcggaatggaatgtg |
334 |
Q |
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||||||||||||||||||||| |
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| T |
41722921 |
ttggtggcggaatggaatgtg |
41722901 |
T |
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