View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4193_low_25 (Length: 343)

Name: NF4193_low_25
Description: NF4193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4193_low_25
NF4193_low_25
[»] chr4 (43 HSPs)
chr4 (1-116)||(44111773-44111891)
chr4 (1-116)||(48361054-48361172)
chr4 (1-107)||(4386147-4386256)
chr4 (1-104)||(25477573-25477679)
chr4 (1-104)||(30191910-30192016)
chr4 (1-110)||(36132663-36132775)
chr4 (1-109)||(42169071-42169182)
chr4 (1-116)||(50121439-50121557)
chr4 (1-110)||(3162903-3163015)
chr4 (25-110)||(9894633-9894721)
chr4 (1-109)||(48195899-48196010)
chr4 (1-83)||(32714297-32714380)
chr4 (1-119)||(45828443-45828564)
chr4 (2-119)||(696379-696499)
chr4 (2-119)||(764677-764797)
chr4 (1-69)||(17284763-17284831)
chr4 (1-84)||(35429801-35429885)
chr4 (1-104)||(21554137-21554242)
chr4 (1-116)||(53225672-53225790)
chr4 (1-69)||(45096626-45096694)
chr4 (1-104)||(8347659-8347765)
chr4 (1-104)||(42670778-42670884)
chr4 (1-71)||(9044415-9044485)
chr4 (2-62)||(44061417-44061477)
chr4 (1-69)||(55951690-55951758)
chr4 (1-104)||(16412248-16412354)
chr4 (31-110)||(41116570-41116652)
chr4 (6-104)||(26066383-26066484)
chr4 (30-105)||(23226963-23227041)
chr4 (1-116)||(47943729-47943847)
chr4 (1-51)||(19150793-19150843)
chr4 (8-110)||(42804264-42804368)
chr4 (6-115)||(43020759-43020870)
chr4 (9-110)||(46434107-46434211)
chr4 (6-110)||(20459274-20459380)
chr4 (6-110)||(20745365-20745471)
chr4 (8-104)||(43117889-43117988)
chr4 (6-110)||(47866044-47866150)
chr4 (19-117)||(28020523-28020624)
chr4 (1-47)||(50685484-50685530)
chr4 (24-83)||(14859742-14859802)
chr4 (8-83)||(25700490-25700566)
chr4 (6-110)||(55190700-55190806)
[»] chr7 (36 HSPs)
chr7 (1-104)||(36245404-36245510)
chr7 (1-116)||(13807244-13807358)
chr7 (1-104)||(28677345-28677451)
chr7 (1-110)||(6838385-6838495)
chr7 (1-110)||(8566109-8566221)
chr7 (1-110)||(11668043-11668155)
chr7 (1-109)||(48082808-48082918)
chr7 (1-104)||(2680886-2680993)
chr7 (1-109)||(30869214-30869325)
chr7 (1-101)||(45533247-45533350)
chr7 (8-110)||(44682574-44682679)
chr7 (3-116)||(10462379-10462495)
chr7 (1-116)||(2523798-2523916)
chr7 (8-116)||(10007611-10007722)
chr7 (1-116)||(39153315-39153431)
chr7 (1-100)||(29365649-29365751)
chr7 (1-116)||(41850598-41850716)
chr7 (1-106)||(9979829-9979936)
chr7 (15-100)||(34117981-34118069)
chr7 (1-69)||(2399980-2400048)
chr7 (1-69)||(45441464-45441532)
chr7 (1-69)||(40142801-40142869)
chr7 (8-103)||(2610202-2610300)
chr7 (5-104)||(4925905-4926007)
chr7 (6-116)||(32811411-32811523)
chr7 (1-48)||(48838385-48838432)
chr7 (1-51)||(28298924-28298974)
chr7 (1-69)||(24163321-24163389)
chr7 (6-110)||(27231867-27231973)
chr7 (9-104)||(30823723-30823821)
chr7 (1-83)||(32811738-32811820)
chr7 (1-51)||(40176064-40176114)
chr7 (8-104)||(45981022-45981120)
chr7 (8-69)||(47987202-47987263)
chr7 (6-110)||(1366628-1366734)
chr7 (6-110)||(31227501-31227607)
[»] chr1 (33 HSPs)
chr1 (1-110)||(38040304-38040416)
chr1 (1-116)||(26070826-26070944)
chr1 (1-110)||(38737959-38738071)
chr1 (1-83)||(519861-519944)
chr1 (1-107)||(34332487-34332596)
chr1 (1-110)||(49944841-49944953)
chr1 (8-110)||(50155333-50155438)
chr1 (1-98)||(15342957-15343057)
chr1 (1-83)||(6661551-6661634)
chr1 (1-83)||(38590094-38590177)
chr1 (1-83)||(44939094-44939177)
chr1 (8-105)||(640535-640634)
chr1 (1-116)||(26924215-26924333)
chr1 (6-104)||(23923564-23923665)
chr1 (9-110)||(11386162-11386267)
chr1 (1-51)||(15286037-15286087)
chr1 (1-116)||(26760201-26760319)
chr1 (1-104)||(34146833-34146938)
chr1 (1-70)||(37178961-37179030)
chr1 (1-110)||(37515118-37515230)
chr1 (1-104)||(8971242-8971348)
chr1 (9-48)||(9387259-9387298)
chr1 (1-107)||(27819339-27819449)
chr1 (1-69)||(47912845-47912911)
chr1 (28-104)||(7375524-7375603)
chr1 (6-110)||(43929379-43929485)
chr1 (6-110)||(47678289-47678395)
chr1 (2-38)||(52427376-52427412)
chr1 (1-112)||(6793600-6793714)
chr1 (1-101)||(18744576-18744675)
chr1 (1-71)||(24305693-24305763)
chr1 (1-38)||(39748647-39748684)
chr1 (6-110)||(47844542-47844648)
[»] scaffold0236 (1 HSPs)
scaffold0236 (1-116)||(16679-16794)
[»] chr2 (52 HSPs)
chr2 (1-103)||(32457241-32457346)
chr2 (1-104)||(11030220-11030326)
chr2 (1-104)||(38983027-38983133)
chr2 (1-104)||(41153139-41153245)
chr2 (1-109)||(12962714-12962825)
chr2 (1-116)||(9152407-9152525)
chr2 (1-116)||(7943467-7943586)
chr2 (1-109)||(30758748-30758858)
chr2 (1-104)||(5281206-5281311)
chr2 (1-107)||(29988903-29989012)
chr2 (1-102)||(12873739-12873843)
chr2 (3-100)||(39445013-39445113)
chr2 (1-107)||(33824361-33824470)
chr2 (9-110)||(20555266-20555370)
chr2 (1-110)||(38554486-38554598)
chr2 (9-104)||(4410813-4410912)
chr2 (1-83)||(10204963-10205046)
chr2 (1-104)||(28248961-28249067)
chr2 (1-68)||(28494757-28494824)
chr2 (1-71)||(11182193-11182263)
chr2 (7-69)||(35728499-35728561)
chr2 (1-110)||(30761386-30761498)
chr2 (3-83)||(39118051-39118132)
chr2 (1-109)||(34447531-34447642)
chr2 (1-104)||(36881547-36881647)
chr2 (1-71)||(3837438-3837508)
chr2 (2-83)||(33273999-33274081)
chr2 (3-116)||(43714004-43714119)
chr2 (6-48)||(22333558-22333600)
chr2 (8-110)||(29169871-29169975)
chr2 (1-47)||(32487064-32487110)
chr2 (1-70)||(920465-920534)
chr2 (1-110)||(5109371-5109483)
chr2 (1-62)||(28014332-28014393)
chr2 (1-69)||(37670370-37670438)
chr2 (6-110)||(45034406-45034512)
chr2 (6-104)||(4063286-4063386)
chr2 (1-38)||(5559596-5559633)
chr2 (3-52)||(12486061-12486110)
chr2 (6-110)||(45571038-45571144)
chr2 (6-110)||(45574705-45574811)
chr2 (6-110)||(45578372-45578478)
chr2 (6-110)||(45582039-45582145)
chr2 (6-110)||(45585706-45585812)
chr2 (6-110)||(45589373-45589479)
chr2 (6-110)||(45593040-45593146)
chr2 (6-110)||(45596707-45596813)
chr2 (6-110)||(45600374-45600480)
chr2 (6-110)||(45604041-45604147)
chr2 (6-110)||(45607708-45607814)
chr2 (6-110)||(45611375-45611481)
chr2 (6-110)||(45615042-45615148)
[»] chr8 (26 HSPs)
chr8 (1-110)||(5031472-5031584)
chr8 (1-116)||(35149696-35149814)
chr8 (1-110)||(8803236-8803348)
chr8 (2-116)||(24618987-24619103)
chr8 (2-110)||(42122995-42123108)
chr8 (1-103)||(16448817-16448922)
chr8 (1-104)||(8453623-8453728)
chr8 (1-104)||(8793733-8793839)
chr8 (1-110)||(7693061-7693173)
chr8 (1-104)||(10184579-10184685)
chr8 (2-116)||(1223125-1223242)
chr8 (6-108)||(34711091-34711196)
chr8 (1-71)||(40483311-40483381)
chr8 (9-104)||(10839777-10839875)
chr8 (1-71)||(15720249-15720319)
chr8 (25-71)||(30255783-30255829)
chr8 (1-110)||(16008551-16008663)
chr8 (1-63)||(24821919-24821981)
chr8 (1-110)||(43332568-43332681)
chr8 (1-84)||(36191775-36191857)
chr8 (8-104)||(883653-883752)
chr8 (1-69)||(3236382-3236450)
chr8 (6-110)||(6899428-6899534)
chr8 (23-104)||(15726809-15726893)
chr8 (6-110)||(36366058-36366164)
chr8 (6-110)||(44796350-44796456)
[»] chr3 (26 HSPs)
chr3 (3-104)||(54537457-54537561)
chr3 (1-110)||(23222986-23223097)
chr3 (1-116)||(21662888-21663006)
chr3 (2-83)||(25954051-25954133)
chr3 (2-104)||(44518050-44518155)
chr3 (3-105)||(52864964-52865069)
chr3 (1-79)||(9236128-9236207)
chr3 (1-104)||(43448972-43449078)
chr3 (1-116)||(51516960-51517077)
chr3 (1-110)||(12747725-12747837)
chr3 (1-110)||(35099083-35099195)
chr3 (2-69)||(36985208-36985275)
chr3 (2-69)||(37010647-37010714)
chr3 (1-104)||(51723392-51723498)
chr3 (1-116)||(53441935-53442053)
chr3 (1-51)||(9197109-9197159)
chr3 (1-51)||(20028499-20028548)
chr3 (6-110)||(53357321-53357429)
chr3 (1-102)||(12064937-12065041)
chr3 (1-83)||(19649607-19649690)
chr3 (1-83)||(8266270-8266351)
chr3 (1-69)||(45010778-45010846)
chr3 (24-110)||(40460353-40460443)
chr3 (1-63)||(13622515-13622577)
chr3 (6-104)||(29457873-29457973)
chr3 (1-51)||(47720739-47720789)
[»] chr5 (24 HSPs)
chr5 (1-83)||(18473512-18473595)
chr5 (1-83)||(5002168-5002251)
chr5 (1-110)||(36434706-36434818)
chr5 (1-83)||(919670-919753)
chr5 (1-83)||(33478144-33478227)
chr5 (1-83)||(34297202-34297285)
chr5 (1-105)||(22101921-22102028)
chr5 (8-116)||(1248841-1248942)
chr5 (8-116)||(11931971-11932083)
chr5 (3-83)||(36286089-36286170)
chr5 (3-109)||(16619026-16619136)
chr5 (1-116)||(29299359-29299478)
chr5 (1-104)||(13789760-13789866)
chr5 (1-68)||(18391526-18391593)
chr5 (1-104)||(21488311-21488417)
chr5 (1-104)||(13664974-13665073)
chr5 (1-104)||(38394442-38394548)
chr5 (9-70)||(32452264-32452325)
chr5 (7-83)||(39239832-39239909)
chr5 (1-48)||(14221873-14221920)
chr5 (1-68)||(10228116-10228187)
chr5 (6-116)||(29031070-29031182)
chr5 (8-104)||(18718252-18718354)
chr5 (6-110)||(15968319-15968425)
[»] chr6 (16 HSPs)
chr6 (1-110)||(30627831-30627943)
chr6 (1-110)||(17265749-17265861)
chr6 (3-110)||(28630761-28630871)
chr6 (9-110)||(2972172-2972276)
chr6 (1-70)||(9077637-9077706)
chr6 (1-116)||(12999783-12999902)
chr6 (6-116)||(2230382-2230495)
chr6 (1-69)||(12450403-12450471)
chr6 (1-71)||(10283322-10283392)
chr6 (1-71)||(27909025-27909095)
chr6 (1-51)||(30895254-30895304)
chr6 (1-69)||(3064935-3065003)
chr6 (11-69)||(28863372-28863430)
chr6 (1-53)||(3046681-3046733)
chr6 (1-104)||(33119932-33120036)
chr6 (1-66)||(8052911-8052976)
[»] scaffold0086 (1 HSPs)
scaffold0086 (1-76)||(1482-1556)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-116)||(1561-1678)
[»] scaffold0136 (1 HSPs)
scaffold0136 (2-106)||(16541-16648)
[»] scaffold0123 (1 HSPs)
scaffold0123 (8-116)||(28124-28235)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-84)||(40181-40266)
[»] scaffold0767 (1 HSPs)
scaffold0767 (42-119)||(3722-3802)
[»] scaffold0238 (1 HSPs)
scaffold0238 (16-83)||(2541-2609)


Alignment Details
Target: chr4 (Bit Score: 84; Significance: 7e-40; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 44111773 - 44111891
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||  |||||||||||||||||    
T  44111773 atttgacttttttgattaattacataaatgatgtatttggtctatattctaaagaagatacatcaattactcaatgaatctaaaaagtcaactttttctt 44111872  T
Q  98 ataaataagaccgcaggga 116  Q
    ||||||||||||| |||||    
T  44111873 ataaataagaccggaggga 44111891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 48361172 - 48361054
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || |||||||||||||| |||||||||  |||||||| ||||||||    
T  48361172 atttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaaaatacatcaattactcaatgaatctaaaaagtcaaatttttctt 48361073  T
Q  98 ataaataagaccgcaggga 116  Q
    ||||||| ||||| |||||    
T  48361072 ataaataggaccggaggga 48361054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 4386256 - 4386147
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||| |||| || ||||||||||||| |||||||| |  |||||||| ||||||||    
T  4386256 atttgacttttttgattcattacataaatgatgtatttagtctatattgtagataaaatacatcaattacttaatgaatttaaaaagtcaaatttttctt 4386157  T
Q  98 ataaataaga 107  Q
    ||||||||||    
T  4386156 ataaataaga 4386147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 25477573 - 25477679
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| | || |||||||||||||| ||||||| |  ||||||||  |||||||    
T  25477573 atttgacttttttgattcattgcataaatgatgtatttgatctatattctacacaaaatacatcaattactcaatgaatttaaaaagtcaaaattttctt 25477672  T
Q  98 ataaata 104  Q
    |||||||    
T  25477673 ataaata 25477679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 30192016 - 30191910
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||| |||||||||||||||| ||||||||||||||||| ||||||||||||| || |||||||||||||| |||||||||  ||| |||| ||||||||    
T  30192016 atttaacttttttgattcattgcataaatgatgtatttggtctatattctagacaaaatacatcaattactcaatgaatctaaaaaatcaattttttctt 30191917  T
Q  98 ataaata 104  Q
    |||||||    
T  30191916 ataaata 30191910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 36132663 - 36132775
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||||||||||||||||||||  |||||||||||||||  ||||||||| ||| |||||||||||| |||| |||| ||||  |||||||| ||||||||    
T  36132663 atttgacttttttgattcattgtataaatgatgtatttagtctatattcaagacaagatacatcaactactcaatgtatcttaaaagtcaattttttctt 36132762  T
Q  98 ataaataagaccg 110  Q
    |||||||||||||    
T  36132763 ataaataagaccg 36132775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 42169071 - 42169182
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||| ||| || |||||||||||| | ||| |||||  |||||||| ||||||||    
T  42169071 atttgacttttttgattcattacataaatgatgtatttggtccatattcaagacaaaatacatcaattattcaataaatctaaaaagtcaaatttttctt 42169170  T
Q  98 ataaataagacc 109  Q
    ||||||| ||||    
T  42169171 ataaataggacc 42169182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 50121557 - 50121439
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||| ||||||| |||||||||| |||||| ||||||| ||||| ||||||||||||| | | ||| |||||  |||||||| ||||||||    
T  50121557 atttgacttttttaattcattgcataaatgatatatttggtctatatactagacaagatacatcaatcattcaataaatctaaaaagtcaaatttttctt 50121458  T
Q  98 ataaataagaccgcaggga 116  Q
    ||||||||||||| |||||    
T  50121457 ataaataagaccgaaggga 50121439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3163015 - 3162903
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||||||||||| |||||||||||||||   ||||||||||||| |||||| || ||||||  ||||||| |  |||||||| ||||||||    
T  3163015 atttgacttttttgattcattgcataaatgatgtattgagtctatattctagacaagatatattaattacacaatgaatttaaaaagtcaattttttctt 3162916  T
Q  98 ataaataagaccg 110  Q
    |||||||||||||    
T  3162915 ataaataagaccg 3162903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 9894721 - 9894633
Alignment:
Q  25 taaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatct--aaagtcaactttttcttataaataagaccg 110  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| || ||||||||||  |||||||||||||||||||||||| |||||    
T  9894721 taaatgatgtatttgatctatattctagacaagatacattaataacataatgaatctaaaaagtcaactttttcttataaataggaccg 9894633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 48196010 - 48195899
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||||||||||| ||||||| ||||||||| ||||||| |  ||||| |  ||||||||    
T  48196010 atttgacttttttggttcattgcataaatgatgtatttggtctatattctagacaagatacgtcaattactcaatgaatttaaaaagttagttttttctt 48195911  T
Q  98 ataaataagacc 109  Q
    ||||||| ||||    
T  48195910 ataaataggacc 48195899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 32714297 - 32714380
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa 83  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||| || |||||||||| | | ||||||||||||    
T  32714297 atttgacttttttgattcattacataaatgatgtatttagtctatattctagacaaaatacatcaatcattgaatgaatctaaa 32714380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 45828443 - 45828564
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||||| ||||||||||| |||||||||||||||||||| | |||||| ||||  | |||||| ||||||| |||||||||  ||| |||| ||||||||    
T  45828443 atttgatttttttgattctttacataaatgatgtatttggtttatattatagaccaaatacattaattactcaatgaatctaaaaaatcaattttttctt 45828542  T
Q  98 ataaataagaccgcagggaata 119  Q
    ||||||| ||||| ||||||||    
T  45828543 ataaataggaccgaagggaata 45828564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 696379 - 696499
Alignment:
Q  2 tttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaatta-ctaatgaatct--aaagtcaactttttctta 98  Q
    |||||||||||||||||||| ||||||||||| ||||  ||||||||||| | ||||||||| |||||  |||| |||||  ||| | ||||||||||||    
T  696379 tttgacttttttgattcattgcataaatgatggatttagtctatattctaaacaagatacattaattatataataaatcttaaaaattaactttttctta 696478  T
Q  99 taaataagaccgcagggaata 119  Q
    |||||| ||||| ||||||||    
T  696479 taaataggaccggagggaata 696499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 764677 - 764797
Alignment:
Q  2 tttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaatta-ctaatgaatct--aaagtcaactttttctta 98  Q
    |||||||||||||||||||| ||||||||||| ||||  ||||||||||| | ||||||||| |||||  |||| |||||  ||| | ||||||||||||    
T  764677 tttgacttttttgattcattgcataaatgatggatttagtctatattctaaacaagatacattaattatataataaatcttaaaaattaactttttctta 764776  T
Q  99 taaataagaccgcagggaata 119  Q
    |||||| ||||| ||||||||    
T  764777 taaataggaccggagggaata 764797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 17284763 - 17284831
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaatta 69  Q
    |||||| |||||||||||||| |||||||||||||| || ||||||||||||| |||||||||||||||    
T  17284763 atttgatttttttgattcattgcataaatgatgtatgtggtctatattctagacaagatacatcaatta 17284831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 35429801 - 35429885
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaag 84  Q
    ||||||||||||| |||| || |||||| |||||||||| ||||||||||||| ||||||||||||||||| ||| |||||||||    
T  35429801 atttgactttttttattcgttgcataaaagatgtatttggtctatattctagacaagatacatcaattactcaattaatctaaag 35429885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 21554137 - 21554242
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||||||||||| |||||||| ||||||||||||||||| ||||||||||| |  | |||||| ||||||| |||||||||  ||| |||||||||||||    
T  21554137 atttgactttttcgattcattgcataaatgatgtatttggtctatattctatatca-atacattaattactcaatgaatctaaaaaatcaactttttctt 21554235  T
Q  98 ataaata 104  Q
    |||||||    
T  21554236 ataaata 21554242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 53225672 - 53225790
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||| |||||||||||||||| ||||||||||||||||| |||| |||||| |  | |||||| ||||| | |||||||||  |||||||| ||||||||    
T  53225672 attttacttttttgattcattgcataaatgatgtatttggtctacattctataccaaatacattaattattcaatgaatctaaaaagtcaattttttctt 53225771  T
Q  98 ataaataagaccgcaggga 116  Q
    ||||||| ||||| |||||    
T  53225772 ataaataggaccggaggga 53225790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 45096694 - 45096626
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaatta 69  Q
    ||||||||||||||||| ||| |||||||||| |||||| |||||| |||||| |||||||||||||||    
T  45096694 atttgacttttttgatttattgcataaatgatatatttggtctataatctagacaagatacatcaatta 45096626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 8347765 - 8347659
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||| |||||||  |||||||||||||| | |||||||| || | || |||||||||| ||| |||||||||  |||||||| ||||||||    
T  8347765 atttgactttttttattcattgtataaatgatgtattcggtctatattttatacaaaatacatcaatcactcaatgaatctaaaaagtcaaatttttctt 8347666  T
Q  98 ataaata 104  Q
    |||||||    
T  8347665 ataaata 8347659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 42670884 - 42670778
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatc--taaagtcaactttttctt 97  Q
    |||||||||||| |||||||| |||||||||| |||||| ||||||||||| |  |||||||| ||||||  ||||||||   ||||| |||||||||||    
T  42670884 atttgactttttagattcattgcataaatgatatatttggtctatattctaaacgagatacattaattacacaatgaatcaaaaaagttaactttttctt 42670785  T
Q  98 ataaata 104  Q
    |||||||    
T  42670784 ataaata 42670778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 9044415 - 9044485
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact 71  Q
    |||||||||||||||||||||  ||||||||||| ||||  |||||||||||| || ||||||||||||||    
T  9044415 atttgacttttttgattcattgtataaatgatgtctttggcctatattctagacaaaatacatcaattact 9044485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 44061417 - 44061477
Alignment:
Q  2 tttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagataca 62  Q
    ||||| |||||||||||||| ||||||| ||||||||| ||||||||||||| ||||||||    
T  44061417 tttgagttttttgattcattgcataaataatgtatttggtctatattctagacaagataca 44061477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 55951690 - 55951758
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaatta 69  Q
    ||||||||||||| |||| ||| |||||||||||||||||| ||||||| ||| ||||||||| |||||    
T  55951690 atttgacttttttaattcgttatataaatgatgtatttgatttatattcaagacaagatacattaatta 55951758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 16412354 - 16412248
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||||| |||||  |||| ||||||| ||||||||| |||||||||||||  | ||| |||||||| | |||||||||  |||||||| ||||||||    
T  16412354 atttgacttctttgacacattgcataaataatgtatttggtctatattctagaccaaatatatcaattattcaatgaatctaaaaagtcaattttttctt 16412255  T
Q  98 ataaata 104  Q
    |||||||    
T  16412254 ataaata 16412248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 41116652 - 41116570
Alignment:
Q  31 atgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaataagaccg 110  Q
    ||||||||| |||||||| |||| ||||||||||||||||| |||||||||  ||||| || ||||||||||||||| |||||    
T  41116652 atgtatttggtctatattttagataagatacatcaattactcaatgaatctaaaaagttaaatttttcttataaataggaccg 41116570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 26066484 - 26066383
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaa 102  Q
    ||||||| ||||||||| |||| |||||||| || |||||||||||||   ||||||||||||| | |||||||||  |||||||| | |||||||||||    
T  26066484 actttttagattcattaaataactgatgtatctggtctatattctagaccggatacatcaattattcaatgaatcttgaaagtcaattatttcttataaa 26066385  T
Q  103 ta 104  Q
    ||    
T  26066384 ta 26066383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 23227041 - 23226963
Alignment:
Q  30 gatgtatttgatctatattctagagaagatacatcaattac-taatgaatctaaa--gtcaactttttcttataaataa 105  Q
    |||||||||| ||||| || |||| ||||||||| |||||| |||||||||||||  ||||| ||||||||||||||||    
T  23227041 gatgtatttggtctattttttagacaagatacattaattacataatgaatctaaaaagtcaattttttcttataaataa 23226963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 47943847 - 47943729
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||| ||||||||||||| ||||||||||||||||  |||||||| || |  |  ||||| ||||||| ||| |||||  |||||||| |||||| |    
T  47943847 atttgacatttttgattcattgcataaatgatgtatttagtctatattttataccaagtacattaattactcaattaatctaaaaagtcaattttttcat 47943748  T
Q  98 ataaataagaccgcaggga 116  Q
    ||||||| ||||| |||||    
T  47943747 ataaataggaccgaaggga 47943729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 19150843 - 19150793
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattcta 51  Q
    |||| ||||||| |||||||| ||||||||||||||||| |||||||||||    
T  19150843 attttactttttcgattcattgcataaatgatgtatttggtctatattcta 19150793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 42804368 - 42804264
Alignment:
Q  8 ttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa--gtcaactttttcttataaata 104  Q
    ||||||||||||||| |||  ||||||||||| ||||| ||||| |  || ||||||||||| | ||||||||||||  || ||||||||||||||||||    
T  42804368 ttttttgattcattaaatagttgatgtatttggtctat-ttctaaattaggtacatcaattattgaatgaatctaaaaagttaactttttcttataaata 42804270  T
Q  105 agaccg 110  Q
     |||||    
T  42804269 ggaccg 42804264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 115
Target Start/End: Complemental strand, 43020870 - 43020759
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa--gtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||| ||||| ||||||   || ||||||||||| | ||||||||||||  || ||||||||||||||||    
T  43020870 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggttaggtacatcaattattgaatgaatctaaaaagttaactttttcttataaa 43020772  T
Q  103 taagaccgcaggg 115  Q
    || ||||| ||||    
T  43020771 taggaccggaggg 43020759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 46434211 - 46434107
Alignment:
Q  9 tttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatct--aaagtcaactttttcttataaataa 105  Q
    ||||||||||||| | |||||| | |||||||||||||||||| | || ||| || |||||| ||| ||||||  |||||||| | ||| ||||||||||    
T  46434211 tttttgattcattgcttaaatggtatatttgatctatattctaaacaatatatattaattacttaaagaatctaaaaagtcaaatattttttataaataa 46434112  T
Q  106 gaccg 110  Q
    |||||    
T  46434111 gaccg 46434107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 20459274 - 20459380
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa--gtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||| ||||| ||||||   || ||||||||||| | ||||||||||||  || ||||||||||||||||    
T  20459274 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaactttttcttataaa 20459372  T
Q  103 taagaccg 110  Q
    || |||||    
T  20459373 taggaccg 20459380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 20745365 - 20745471
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||||||||| ||||||   || ||||||||||| | |||||||||  ||| | ||||||||||||||||    
T  20745365 acttttttgattcattgaatagttgatgtatttgatctat-ttctaggctaggtacatcaattattgaatgaatctaaaaaattaactttttcttataaa 20745463  T
Q  103 taagaccg 110  Q
    || |||||    
T  20745464 taggaccg 20745471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 43117889 - 43117988
Alignment:
Q  8 ttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaata 104  Q
    |||||||||| ||| ||||||||||||||||| |||||||| || |  | |||||||||||| | ||||||| |  ||| |||| |||||||||||||||    
T  43117889 ttttttgatttattgcataaatgatgtatttggtctatattttataccaaatacatcaattattcaatgaatgtaaaaaatcaattttttcttataaata 43117988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 47866150 - 47866044
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa--gtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||| ||||| ||||||   || ||||||||||| | ||||||||||||  || ||||||||||||||||    
T  47866150 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaactttttcttataaa 47866052  T
Q  103 taagaccg 110  Q
    || |||||    
T  47866051 taggaccg 47866044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 28020523 - 28020624
Alignment:
Q  19 attacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa--gtcaactttttcttataaataagaccgcaggg 115  Q
    ||||||| |||||| |||||| ||||||||||| |  | |||||| ||||||| ||| ||| ||||  ||||||||||||||||||| | ||||| ||||    
T  28020523 attacattaatgatttatttggtctatattctatactaaatacattaattacttaataaatttaaaaagtcaactttttcttataaaaatgaccggaggg 28020622  T
Q  116 aa 117  Q
    ||    
T  28020623 aa 28020624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 50685484 - 50685530
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatat 47  Q
    ||||||||||||| ||| ||| ||||||||||||||||| |||||||    
T  50685484 atttgactttttttattaattccataaatgatgtatttggtctatat 50685530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 14859802 - 14859742
Alignment:
Q  24 ataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa 83  Q
    |||||||||||||||  | |||||| |||| |||||||||||||| || ||||||||||||    
T  14859802 ataaatgatgtatttagtatatattgtagacaagatacatcaatttctcaatgaatctaaa 14859742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 25700566 - 25700490
Alignment:
Q  8 ttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa 83  Q
    ||||| ||||||||  ||||||||||||| || |||||||| ||||  | |||||||| ||||| ||||||||||||    
T  25700566 tttttagattcattcaataaatgatgtatgtggtctatattgtagatcacatacatcatttactgaatgaatctaaa 25700490  T

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Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 55190700 - 55190806
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaa 102  Q
    |||||||||||||| |  |||| ||||||||||| ||||| ||||||   |||||||||||||| | ||||||| |  ||| |||| |||||||||||||    
T  55190700 acttttttgattcagtggataattgatgtatttggtctat-ttctaggctagatacatcaattattgaatgaatataaaaaatcaattttttcttataaa 55190798  T
Q  103 taagaccg 110  Q
    || |||||    
T  55190799 taggaccg 55190806  T

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Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 36245404 - 36245510
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||  |||||||| ||||||||    
T  36245404 atttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacatcaattactcaatgaatctaaaaagtcaattttttctt 36245503  T
Q  98 ataaata 104  Q
    |||||||    
T  36245504 ataaata 36245510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 13807358 - 13807244
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    |||||||||| |||||||||  |||||||||||||||||    
T  13807358 atttgacttttttgattcattacataaatgatatatttgatctatattctaaagaag----atcaattactcaatgaatctaaaaagtcaactttttctt 13807263  T
Q  98 ataaataagaccgcaggga 116  Q
    ||||||||||||| |||||    
T  13807262 ataaataagaccggaggga 13807244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 28677345 - 28677451
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| |||||  |||||||| ||||||||    
T  28677345 atttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacatcaattactcaataaatctaaaaagtcaattttttctt 28677444  T
Q  98 ataaata 104  Q
    |||||||    
T  28677445 ataaata 28677451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 6838495 - 6838385
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaagtcaactttttcttat 99  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||| ||||||| |||||||| |||  ||| ||||||||||    
T  6838495 atttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacattaattactcaatgaatcaaaaaccaaatttttcttat 6838396  T
Q  100 aaataagaccg 110  Q
    ||||| |||||    
T  6838395 aaatatgaccg 6838385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 8566109 - 8566221
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||| |||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||  ||| |||| ||||||||    
T  8566109 atttaacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacatcaattactcaatgaatctaaaaaatcaaatttttctt 8566208  T
Q  98 ataaataagaccg 110  Q
    ||||||| |||||    
T  8566209 ataaataggaccg 8566221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 11668043 - 11668155
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||| | ||||||| |  |||||||| ||||||||    
T  11668043 atttgacttttttgattcattgcataaatgatatatttgatctatattctagacaagatacatcaattaatcaatgaatgtaaaaagtcaaatttttctt 11668142  T
Q  98 ataaataagaccg 110  Q
    ||||||| |||||    
T  11668143 ataaataggaccg 11668155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 48082918 - 48082808
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||| |||||||||||||||| |||||||| ||||||||||| | | ||||||| ||||||  |||||||||  |||||||||||||||||    
T  48082918 atttgactttttttattcattacataaatggtgtatttg-tctatattctacacatgatacattaattacacaatgaatctaaaaagtcaactttttctt 48082820  T
Q  98 ataaataagacc 109  Q
    ||||||||||||    
T  48082819 ataaataagacc 48082808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 2680886 - 2680993
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagag-aagatacatcaatta-ctaatgaatct--aaagtcaactttttct 96  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||  ||||   ||| |||||  |||||||||||||| |    
T  2680886 atttgacttttttgattcattatataaatgatgtatttgatctatattctagagaaagatacattcattatacaataaatctaaaaagtcaacttttttt 2680985  T
Q  97 tataaata 104  Q
    ||||||||    
T  2680986 tataaata 2680993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 30869214 - 30869325
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||| ||||||||| |||  |||||| ||||||||| ||||||||||||| ||||||||||||||||| |||||||||  ||||||||  |||||||    
T  30869214 atttgacgtttttgatttattgtataaataatgtatttggtctatattctagacaagatacatcaattactcaatgaatctaaaaagtcaaaattttctt 30869313  T
Q  98 ataaataagacc 109  Q
    ||||||| ||||    
T  30869314 ataaataggacc 30869325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 45533350 - 45533247
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||| |||||||  |||||| ||||||||| ||||||||||||| ||||||||| |||||| ||||||||||  |||||||| ||||||||    
T  45533350 atttgacttttttaattcattgtataaataatgtatttggtctatattctagacaagatacattaattacataatgaatctaaaaagtcaattttttctt 45533251  T
Q  98 ataa 101  Q
    ||||    
T  45533250 ataa 45533247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 44682679 - 44682574
Alignment:
Q  8 ttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatct--aaagtcaactttttcttataaata 104  Q
    |||||||||||||| |||||||||| |||||| |||||| |||||| || |||||||| |||| ||||||||||  |||||||| |||||||||||||||    
T  44682679 ttttttgattcattgcataaatgatatatttggtctataatctagacaaaatacatcagttacttaatgaatctcaaaagtcaaatttttcttataaata 44682580  T
Q  105 agaccg 110  Q
     |||||    
T  44682579 ggaccg 44682574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 10462495 - 10462379
Alignment:
Q  3 ttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttat 99  Q
    ||||| ||||| ||||||| ||||||||||||||||| | |||||| |||| ||||||||||||| ||| |||||||||  |||||||  ||||||||||    
T  10462495 ttgacattttttattcattgcataaatgatgtatttggtatatattttagacaagatacatcaatcactcaatgaatctaaaaagtcacatttttcttat 10462396  T
Q  100 aaataagaccgcaggga 116  Q
    |||||||| || |||||    
T  10462395 aaataagatcggaggga 10462379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 2523798 - 2523916
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattcta-gagaagatacatcaattact-aatgaatct--aaagtcaactttttct 96  Q
    ||||||||||||||||||||| |||||| ||||||| || ||||||||||| |  ||| ||||| ||||||| |||||||||  ||||||||||||||||    
T  2523798 atttgacttttttgattcattgcataaacgatgtatctggtctatattctatgccaag-tacattaattactcaatgaatctaaaaagtcaactttttct 2523896  T
Q  97 tataaataagaccgcaggga 116  Q
    |||||||| ||||| |||||    
T  2523897 tataaataggaccggaggga 2523916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 10007611 - 10007722
Alignment:
Q  8 ttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaatta-ctaatgaatct--aaagtcaactttttcttataaata 104  Q
    |||||| ||||||| ||||||| ||||||||| ||||||||||| | ||||||||| |||||   |||||||||  ||||||||||||||||||||||||    
T  10007611 tttttttattcatttcataaattatgtatttggtctatattctacacaagatacattaattatacaatgaatctaaaaagtcaactttttcttataaata 10007710  T
Q  105 agaccgcaggga 116  Q
     ||||| |||||    
T  10007711 ggaccggaggga 10007722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 39153315 - 39153431
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||||||||||| ||||||||||||||||  |||||||| ||||  | |||||||||||||| |||||| ||  ||||||||  |||| ||    
T  39153315 atttgacttttttgattcattgcataaatgatgtatttagtctatattatagaccaaatacatcaattactcaatgaagctaaaaagtcaa--ttttttt 39153412  T
Q  98 ataaataagaccgcaggga 116  Q
    ||||||||||||| |||||    
T  39153413 ataaataagaccgaaggga 39153431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 29365649 - 29365751
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||| || |||| ||||||||||||||||||||||||||||| |  | |||||| ||||||| |||||||||  |||||||| ||||||||    
T  29365649 atttgacttttttaatacattgcataaatgatgtatttgatctatattctataccaaatacattaattactcaatgaatctaaaaagtcaattttttctt 29365748  T
Q  98 ata 100  Q
    |||    
T  29365749 ata 29365751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 41850716 - 41850598
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||| |||||||||||||||| ||||||||||||||||| |||||||| || |  | |||||| ||||| | |||||||||  ||| | |||||||||||    
T  41850716 attttacttttttgattcattgcataaatgatgtatttgctctatattttataccaaatacattaattattcaatgaatctaaaaaattaactttttctt 41850617  T
Q  98 ataaataagaccgcaggga 116  Q
    ||||||||||||| |||||    
T  41850616 ataaataagaccgtaggga 41850598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 9979829 - 9979936
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||||||| |||||||| ||| ||||||||||||||||  || |||||||||| ||||||||| ||||||| ||| |||||  |||||||| ||||||||    
T  9979829 atttgactattttgatttatt-cataaatgatgtatttagtcaatattctagacaagatacatgaattactcaataaatctaaaaagtcaaatttttctt 9979927  T
Q  98 ataaataag 106  Q
    |||||||||    
T  9979928 ataaataag 9979936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 34117981 - 34118069
Alignment:
Q  15 attcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatct--aaagtcaactttttcttata 100  Q
    ||||||| ||||||||||||||||| ||||||||||||| ||||||||| ||||||  ||||||| |  ||||||||||||||||||||    
T  34117981 attcattgcataaatgatgtatttggtctatattctagacaagatacattaattacacaatgaatttaaaaagtcaactttttcttata 34118069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2399980 - 2400048
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaatta 69  Q
    |||||||||||||||||||||  ||||||||||||||| ||||||||| ||||  ||||||||||||||    
T  2399980 atttgacttttttgattcattgtataaatgatgtatttaatctatattttagactagatacatcaatta 2400048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 45441464 - 45441532
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaatta 69  Q
    ||||||||||||||||| |||  ||| |||||||||||||||||||||||||| |||||||| ||||||    
T  45441464 atttgacttttttgatttattgtatagatgatgtatttgatctatattctagacaagatacaccaatta 45441532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 40142801 - 40142869
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaatta 69  Q
    ||||||||||||||||||||| ||||||| ||||||||| ||||||| ||| | ||||||||| |||||    
T  40142801 atttgacttttttgattcattgcataaataatgtatttggtctatatcctaaacaagatacattaatta 40142869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 2610300 - 2610202
Alignment:
Q  8 ttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaat 103  Q
    |||||| ||||||| ||||||||||||||||  |||||||||||||  | |||||||||||||| ||||||| |  ||| |||| ||||||||||||||    
T  2610300 ttttttaattcattgcataaatgatgtatttagtctatattctagaccaaatacatcaattactcaatgaatttaaaaaatcaaatttttcttataaat 2610202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 4926007 - 4925905
Alignment:
Q  5 gacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatct--aaagtcaactttttcttataa 101  Q
    ||||||| ||||| ||| || ||||||| |||||  |||||||| |||| ||| |||||||||||| ||||||||||  |||||||| ||||||||||||    
T  4926007 gacttttatgatttattgcacaaatgatatatttagtctatattttagacaagttacatcaattacttaatgaatctaaaaagtcaaatttttcttataa 4925908  T
Q  102 ata 104  Q
    |||    
T  4925907 ata 4925905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 32811411 - 32811523
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||| ||||||||||| ||||| ||||||   || ||||||||||||| |||||||||  ||| | ||||||||||||||||    
T  32811411 acttttttgattcattgaataattgatgtatttggtctat-ttctaggctaggtacatcaattactgaatgaatctaaaaaattaactttttcttataaa 32811509  T
Q  103 taagaccgcaggga 116  Q
    || ||||| |||||    
T  32811510 taggaccggaggga 32811523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 48838432 - 48838385
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatatt 48  Q
    |||| |||||||| ||||||||||||||||||||||||| ||||||||    
T  48838432 atttaacttttttaattcattacataaatgatgtatttggtctatatt 48838385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28298974 - 28298924
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattcta 51  Q
    ||||||||||||||||||||| |||||||  | ||||||||||||||||||    
T  28298974 atttgacttttttgattcattgcataaatagtatatttgatctatattcta 28298924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 24163389 - 24163321
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaatta 69  Q
    |||| |||||||| ||||||| |||||||||||||| || |||||||||||   ||||||||| |||||    
T  24163389 atttcacttttttaattcattgcataaatgatgtatatggtctatattctacgcaagatacattaatta 24163321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 27231867 - 27231973
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa--gtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||| ||||| ||||||   || ||||||||||| | ||||||||||||  || ||||||||||||||||    
T  27231867 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaactttttcttataaa 27231965  T
Q  103 taagaccg 110  Q
    || |||||    
T  27231966 taggaccg 27231973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 30823821 - 30823723
Alignment:
Q  9 tttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaata 104  Q
    ||||| |||||||| |||||| ||||||||| ||||||||||| |  | |||||| |||| || |||||||||  ||||||||  ||||||||||||||    
T  30823821 ttttttattcattatataaataatgtatttggtctatattctataccaaatacattaatttctcaatgaatctaaaaagtcaaaattttcttataaata 30823723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 32811738 - 32811820
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa 83  Q
    ||||||||||||| ||| ||| ||||||||||||||||| || |||||||| |  | ||| |||||||||| ||||||||||||    
T  32811738 atttgactttttt-attaattccataaatgatgtatttggtccatattctataccatataaatcaattactcaatgaatctaaa 32811820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 40176064 - 40176114
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattcta 51  Q
    |||| |||||||| ||||||| | ||||||||||||||| |||||||||||    
T  40176064 atttcactttttttattcattgcttaaatgatgtatttggtctatattcta 40176114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 45981120 - 45981022
Alignment:
Q  8 ttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct-aaagtcaactttttcttataaata 104  Q
    |||||| ||||||||||| ||||||||||||  | |||| ||||||  |||||||| | ||| | ||||||| | |||||||| |||||||||||||||    
T  45981120 ttttttaattcattacattaatgatgtattttgtatatactctagatcagatacatgagttattcaatgaatttaaaagtcaattttttcttataaata 45981022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 47987263 - 47987202
Alignment:
Q  8 ttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaatta 69  Q
    |||||| ||||||| ||||||||||||||||| | |||| |||| | |||||| ||||||||    
T  47987263 ttttttaattcattgcataaatgatgtatttggtttatactctaaacaagatatatcaatta 47987202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 1366628 - 1366734
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa--gtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||| ||||| ||||  |  || ||||||||||| | ||||||||||||  || |||||||||| |||||    
T  1366628 acttttttgattcattgaatagttgatgtatttggtctat-ttctgaactaggtacatcaattattgaatgaatctaaaaagttaactttttctgataaa 1366726  T
Q  103 taagaccg 110  Q
    ||||||||    
T  1366727 taagaccg 1366734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 31227607 - 31227501
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaag--tcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||| ||||| ||||||   | ||||||||| || | ||||||||||||   | ||||||||||||||||    
T  31227607 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaaatacatcaactattgaatgaatctaaaaaattaactttttcttataaa 31227509  T
Q  103 taagaccg 110  Q
    ||||||||    
T  31227508 taagaccg 31227501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 38040304 - 38040416
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||| | |||||||||  |||||||| ||||||||    
T  38040304 atttgacttttttgattcattgcataaatgatatatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtcaaatttttctt 38040403  T
Q  98 ataaataagaccg 110  Q
    ||||||| |||||    
T  38040404 ataaataggaccg 38040416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 26070944 - 26070826
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||| |||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||||||||||||||| |||||||||  |||||||| |||  |||    
T  26070944 attttacttttttgattcattgcataaataatgtatttggtctatattctagataagatacatcaattactcaatgaatctaaaaagtcaaatttcactt 26070845  T
Q  98 ataaataagaccgcaggga 116  Q
    ||||||||||||| |||||    
T  26070844 ataaataagaccggaggga 26070826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 38737959 - 38738071
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||||||||||| |||||| |||||||||| | ||||||||||| ||||||||||||||||| |||||||||  ||||| || ||||||||    
T  38737959 atttgacttttttgattcattgcataaaggatgtatttggtttatattctagacaagatacatcaattactcaatgaatctaaaaagttaaatttttctt 38738058  T
Q  98 ataaataagaccg 110  Q
    ||||||| |||||    
T  38738059 ataaataggaccg 38738071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 519861 - 519944
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa 83  Q
    ||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  519861 atttgacttttttgatttattgtataaatgatgtatttgatctatattctagataagatacatcaattactcaatgaatctaaa 519944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 34332596 - 34332487
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||||||||||||||||||||  |||||||||||||||| ||||||||||||| || |||||||||||||| |||||||||  ||||||||  |||||||    
T  34332596 atttgacttttttgattcattggataaatgatgtatttggtctatattctagacaaaatacatcaattactcaatgaatctaaaaagtcaaagttttctt 34332497  T
Q  98 ataaataaga 107  Q
    ||| ||||||    
T  34332496 atatataaga 34332487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 49944953 - 49944841
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||||| ||||||||||||||  |||||||||||||||| ||||||||||||| ||||||||||||||| | |||||||||  ||||| || ||||||||    
T  49944953 atttgatttttttgattcattgtataaatgatgtatttggtctatattctagacaagatacatcaattattcaatgaatctaaaaagttaaatttttctt 49944854  T
Q  98 ataaataagaccg 110  Q
    ||||||| |||||    
T  49944853 ataaataggaccg 49944841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 50155333 - 50155438
Alignment:
Q  8 ttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaata 104  Q
    |||||| ||||||| ||||||||||||||||| |||||||| ||||  | |||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  50155333 ttttttaattcattgcataaatgatgtatttggtctatattatagaccaaatacatcaattactcaatgaatctaaaaagtcaactttttcttataaata 50155432  T
Q  105 agaccg 110  Q
     |||||    
T  50155433 ggaccg 50155438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 15343057 - 15342957
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatct--aaagtcaactttttctt 97  Q
    |||||| |||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||| ||||||  |||||||||  ||| |||||||||||||    
T  15343057 atttgatttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacattaattacacaatgaatctaaaaattcaactttttctt 15342958  T
Q  98 a 98  Q
    |    
T  15342957 a 15342957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 6661634 - 6661551
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa 83  Q
    ||||||||||||||||| ||| ||||||||||||||||| ||||||||||| | ||||||||| ||||||| ||||||||||||    
T  6661634 atttgacttttttgattaattgcataaatgatgtatttggtctatattctatacaagatacattaattactaaatgaatctaaa 6661551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 38590094 - 38590177
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa 83  Q
    ||||||||||||||||||||| ||||||| ||||||||| ||||||||||| |  |||||||||||||||| ||||||||||||    
T  38590094 atttgacttttttgattcatttcataaataatgtatttggtctatattctataccagatacatcaattactcaatgaatctaaa 38590177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 44939094 - 44939177
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa 83  Q
    ||||||||||||| |||||||  |||||||||||||||| |||||||||||||  |||||||||||||||| ||||||||||||    
T  44939094 atttgactttttttattcattgtataaatgatgtatttggtctatattctagattagatacatcaattactcaatgaatctaaa 44939177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 640634 - 640535
Alignment:
Q  8 ttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattactaatgaatct--aaagtcaactttttcttataaataa 105  Q
    |||||| |||||||  |||||| ||||||||  |||||||| |||| ||||||||||||||||| ||||||||  |||||||| ||||||||||||||||    
T  640634 ttttttcattcattgtataaattatgtatttagtctatattttagataagatacatcaattactcatgaatctaaaaagtcaattttttcttataaataa 640535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 26924333 - 26924215
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||||||||||||||||||||  |||||||||||||||| ||||||||||| |  |  ||||| ||| ||| ||||||| |  |||||||||||||||||    
T  26924333 atttgacttttttgattcattgaataaatgatgtatttggtctatattctataccaagtacattaatgactcaatgaatttaaaaagtcaactttttctt 26924234  T
Q  98 ataaataagaccgcaggga 116  Q
    ||||||| ||||| |||||    
T  26924233 ataaataggaccggaggga 26924215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 23923665 - 23923564
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaa 102  Q
    |||||| ||||||||| ||||||||||| ||||| ||||||||||||| || |||||| ||||||| |||||||||  ||| |||| |||||||||||||    
T  23923665 acttttctgattcattgcataaatgatgcatttggtctatattctagacaatatacattaattactcaatgaatctaaaaattcaaatttttcttataaa 23923566  T
Q  103 ta 104  Q
    ||    
T  23923565 ta 23923564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 11386267 - 11386162
Alignment:
Q  9 tttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct---aaagtcaactttttcttataaata 104  Q
    ||||||||||||| ||||||||||||||||  |||||||||||||  ||| |||||||||| | |||||||||   ||| |||| ||||||||||||| |    
T  11386267 tttttgattcattgcataaatgatgtatttcgtctatattctagaccagaaacatcaattattcaatgaatctaaaaaaatcaattttttcttataaaaa 11386168  T
Q  105 agaccg 110  Q
    ||||||    
T  11386167 agaccg 11386162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 15286037 - 15286087
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattcta 51  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  15286037 atttgacttttttaattcattatataaatgatgtatttgatctatattcta 15286087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 26760201 - 26760319
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||||||||||||||||||||  |||||||||||||||| ||||||||||| |  |  ||||| ||| ||| ||||||| |  ||| |||| ||||||||    
T  26760201 atttgacttttttgattcattgaataaatgatgtatttggtctatattctataccaagtacattaatgactcaatgaatttaaaaaatcaattttttctt 26760300  T
Q  98 ataaataagaccgcaggga 116  Q
    ||||||| ||||| |||||    
T  26760301 ataaataggaccggaggga 26760319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 34146833 - 34146938
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatc--taaagtcaactttttctt 97  Q
    |||| ||||||||||||||||||| |||||||||||||||| |||||||||||  | |||||| ||||| | ||||||||   ||| |||| ||||||||    
T  34146833 atttaacttttttgattcattaca-aaatgatgtatttgatatatattctagatcaaatacattaattattcaatgaatcaaaaaaatcaattttttctt 34146931  T
Q  98 ataaata 104  Q
    |||||||    
T  34146932 ataaata 34146938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 37179030 - 37178961
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac 70  Q
    ||||||||||||||||| |||  |||||||||||||||  |||||||| |||| ||||||||| ||||||    
T  37179030 atttgacttttttgatttattgtataaatgatgtatttagtctatattttagacaagatacattaattac 37178961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 37515118 - 37515230
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa--gtcaactttttctt 97  Q
    |||| |||||||| ||| ||| ||||||| |||||||| ||| |||||| ||| || |||||| ||||||| ||||||||||||  || || ||||||||    
T  37515118 atttaactttttttatttattgcataaataatgtatttaatccatattccagacaacatacattaattacttaatgaatctaaaaagttaaatttttctt 37515217  T
Q  98 ataaataagaccg 110  Q
    ||||||| |||||    
T  37515218 ataaataggaccg 37515230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 8971348 - 8971242
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatcta--aagtcaactttttctt 97  Q
    ||||||||||||||||||||| ||||||| | || ||||||||||||||||    | |||||| ||||||| ||||||||||  || | || ||||||||    
T  8971348 atttgacttttttgattcattgcataaataacgtgtttgatctatattctatgtcaaatacattaattactcaatgaatctaacaacttaattttttctt 8971249  T
Q  98 ataaata 104  Q
    |||||||    
T  8971248 ataaata 8971242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 9387259 - 9387298
Alignment:
Q  9 tttttgattcattacataaatgatgtatttgatctatatt 48  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  9387259 ttttttattcattacataaatgatgtatttgatctatatt 9387298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 27819339 - 27819449
Alignment:
Q  1 atttgacttttttgattcattacataaatgat-gtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttct 96  Q
    ||||||||||||||||||||| ||||||||||  |||||||| |||||| |||| || ||||| ||| || | |||||||||  ||||| || |||||||    
T  27819339 atttgacttttttgattcatttcataaatgatattatttgatttatattttagacaaaatacaccaaatattcaatgaatctaaaaagttaaatttttct 27819438  T
Q  97 tataaataaga 107  Q
    | |||||||||    
T  27819439 tgtaaataaga 27819449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 47912845 - 47912911
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaatta 69  Q
    ||||||||||||||||| |||  |||||| ||||||||||||||||  ||||| ||||||||| |||||    
T  47912845 atttgacttttttgatttattgtataaataatgtatttgatctata--ctagacaagatacattaatta 47912911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 7375524 - 7375603
Alignment:
Q  28 atgatgtatttgatctatattctagagaagatacatcaattac-taatgaatct--aaagtcaactttttcttataaata 104  Q
    |||| ||||||| | ||||||||||| ||||||||| ||||||  |||||||||  |||||||| |||||||||||||||    
T  7375524 atgaagtatttggtttatattctagacaagatacattaattacacaatgaatctaaaaagtcaattttttcttataaata 7375603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 43929379 - 43929485
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaa 102  Q
    ||||||||||||||||| |||  ||||||||||| ||||| |||||    || ||||||||||| | |||||||||  ||||| ||||||||||||||||    
T  43929379 acttttttgattcattaaatagttgatgtatttggtctat-ttctaagctaggtacatcaattattgaatgaatctaaaaagttaactttttcttataaa 43929477  T
Q  103 taagaccg 110  Q
    || |||||    
T  43929478 taggaccg 43929485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 47678289 - 47678395
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||||||||| ||||||   || ||||||||||| | |||||||||  ||||| || |||||||||||||    
T  47678289 acttttttgattcattgaatagttgatgtatttgatctat-ttctaggttaggtacatcaattattgaatgaatctcaaaagttaaatttttcttataaa 47678387  T
Q  103 taagaccg 110  Q
    || |||||    
T  47678388 taggaccg 47678395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 52427376 - 52427412
Alignment:
Q  2 tttgacttttttgattcattacataaatgatgtattt 38  Q
    |||||||||||||||||||| ||||||||||||||||    
T  52427376 tttgacttttttgattcattgcataaatgatgtattt 52427412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 6793714 - 6793600
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||| |||||| ||||||||| |||||||||||||||||| ||||| | || |  |  ||||| ||||| | ||||||| |  ||| | |||||||||||    
T  6793714 atttaacttttatgattcattgcataaatgatgtatttgacctataatatatactaagtacattaattattcaatgaatttaaaaaattaactttttctt 6793615  T
Q  98 ataaataagaccgca 112  Q
    |||||||||||||||    
T  6793614 ataaataagaccgca 6793600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 18744675 - 18744576
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||| |||||||| ||||||| ||||||||||||| ||| |||||||||||||  | |||   |||||| | |||||||||  |||||||||||||||||    
T  18744675 atttaactttttttattcattgcataaatgatgta-ttggtctatattctagatcaaata---caattattcaatgaatctaaaaagtcaactttttctt 18744580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 24305693 - 24305763
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact 71  Q
    |||||| |||||| ||||||  ||||||||||||||  | | ||||||||| | |||||||||||||||||    
T  24305693 atttgattttttttattcatcgcataaatgatgtataaggtttatattctatacaagatacatcaattact 24305763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 39748647 - 39748684
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtattt 38  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  39748647 atttgacttttttaattcattgcataaatgatgtattt 39748684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 47844648 - 47844542
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  |||| |||||||||||| ||||||   || ||||||||||| | |||||||||  ||||| || |||||||||||||    
T  47844648 acttttttgattcattgaatagttgatatatttgatctat-ttctaggttaggtacatcaattattgaatgaatctcaaaagttaaatttttcttataaa 47844550  T
Q  103 taagaccg 110  Q
    || |||||    
T  47844549 taggaccg 47844542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 16679 - 16794
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaagtcaactttttcttat 99  Q
    ||||||||||||||||||||| ||||||  ||||||||| ||||||||||||| ||||||||||||||||| ||||||| ||||||||| ||||||||||    
T  16679 atttgacttttttgattcattgcataaaatatgtatttggtctatattctagacaagatacatcaattactcaatgaatttaaagtcaa-tttttcttat 16777  T
Q  100 aaataagaccgcaggga 116  Q
    ||||| ||||| |||||    
T  16778 aaataggaccggaggga 16794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 1e-29; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 32457241 - 32457346
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||||||||| |||||||||||||||| ||||||||||  |||||||| ||||||||    
T  32457241 atttgacttttttgattcattgcataaatgatgtatttagtctatattctagacaagatacatcaattacttaatgaatctaaaaagtcaaatttttctt 32457340  T
Q  98 ataaat 103  Q
    ||||||    
T  32457341 ataaat 32457346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 11030220 - 11030326
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |  |||||||||||||||| |||||||||  ||||| || ||||||||    
T  11030220 atttgacttttttgattcattacataaatgatgtatttggtctatattctatatcagatacatcaattactcaatgaatctaaaaagttaattttttctt 11030319  T
Q  98 ataaata 104  Q
    |||||||    
T  11030320 ataaata 11030326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 38983027 - 38983133
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||||||||| ||||||||||||||||  |||||||||  ||| |||||||||| ||    
T  38983027 atttgacttttttgattcattgcataaatgatgtattttgtctatattctagacaagatacatcaattacacaatgaatctaaaaaatcaactttttttt 38983126  T
Q  98 ataaata 104  Q
    |||||||    
T  38983127 ataaata 38983133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 41153139 - 41153245
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||| || |  | |||||||||||||| |||||||||  |||||||||||||||||    
T  41153139 atttgacttttttgattcattgcataaatgatgtatttggtctatattataaaccaaatacatcaattactcaatgaatctaaaaagtcaactttttctt 41153238  T
Q  98 ataaata 104  Q
    |||||||    
T  41153239 ataaata 41153245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 12962825 - 12962714
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||| || |  |  ||||| ||||||| |||||||||  |||||||||||||||||    
T  12962825 atttgacttttttgattcattgcataaatgatgtatttggtctatattttataccaagtacattaattactcaatgaatctaaaaagtcaactttttctt 12962726  T
Q  98 ataaataagacc 109  Q
    ||||||||||||    
T  12962725 ataaataagacc 12962714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 9152407 - 9152525
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||||| |||||| |||| ||||||||||| |||||||| ||||  |||||||||||||||| |||||||||  |||||||| | ||||||    
T  9152407 atttgacttttttgagtcattaaataattgatgtatttggtctatattttagactagatacatcaattactcaatgaatctaaaaagtcaattgtttctt 9152506  T
Q  98 ataaataagaccgcaggga 116  Q
     |||||||||||| |||||    
T  9152507 gtaaataagaccggaggga 9152525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 7943467 - 7943586
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaa-ctttttct 96  Q
    ||||||||||||| ||||||| |||||||||| |||||| |||||||| |||| ||||||||||||||| | |||||||||  ||||||||  |||||||    
T  7943467 atttgactttttttattcattgcataaatgatatatttggtctatattgtagacaagatacatcaattattcaatgaatctaaaaagtcaatttttttct 7943566  T
Q  97 tataaataagaccgcaggga 116  Q
    |||||||| ||||| |||||    
T  7943567 tataaataggaccggaggga 7943586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 30758748 - 30758858
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattactaatgaatct--aaagtcaactttttctta 98  Q
    ||||||||||||| ||||||| |||||||| |||||||| |||||| | |||| ||||||||||||||||| |  |||||  |||||||| |||||||||    
T  30758748 atttgactttttttattcattgcataaatggtgtatttggtctatactttagacaagatacatcaattactcaataatctaaaaagtcaaatttttctta 30758847  T
Q  99 taaataagacc 109  Q
    |||||| ||||    
T  30758848 taaataggacc 30758858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 5281206 - 5281311
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattactaatgaatct--aaagtcaactttttctta 98  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| || |  | |||||| |||||| ||  ||| |  ||||||||||||||||||    
T  5281206 atttgacttttttgattcattgcataaatgatgtatttgatctatattttataccaaatacattaattacaaaataatataaaaagtcaactttttctta 5281305  T
Q  99 taaata 104  Q
    ||||||    
T  5281306 taaata 5281311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 29989012 - 29988903
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||| || ||||||  ||||||| |  ||| |||| ||||| ||    
T  29989012 atttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaaaatatattaattacacaatgaatataaaaaatcaattttttttt 29988913  T
Q  98 ataaataaga 107  Q
    ||||||||||    
T  29988912 ataaataaga 29988903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 12873843 - 12873739
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatct--aaagtcaactttttctt 97  Q
    |||||||||| |||||||||| ||||||||||||||||  ||||||||||| |  | |||||| |||||| ||||||||||  |||||||||||||||||    
T  12873843 atttgactttattgattcattgcataaatgatgtatttagtctatattctataccaaatacattaattacttaatgaatctaaaaagtcaactttttctt 12873744  T
Q  98 ataaa 102  Q
    |||||    
T  12873743 ataaa 12873739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 39445113 - 39445013
Alignment:
Q  3 ttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttat 99  Q
    ||||||||||| ||| ||| |||||||| ||||||| |||||||||||||| || |||||||||||||| |||||||||  |||||||| ||||||||||    
T  39445113 ttgacttttttaatttattgcataaatggtgtatttaatctatattctagacaaaatacatcaattactcaatgaatcttaaaagtcaaatttttcttat 39445014  T
Q  100 a 100  Q
    |    
T  39445013 a 39445013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 33824470 - 33824361
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||| |||||||||  ||||||||| ||||| || |||||| |||| |||||| |||||||||| ||||||| |  |||||||| ||||||||    
T  33824470 atttgacttttctgattcattgtataaatgatatatttaatatatattttagacaagatatatcaattactcaatgaatttaaaaagtcaaatttttctt 33824371  T
Q  98 ataaataaga 107  Q
    ||||||||||    
T  33824370 ataaataaga 33824361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 20555370 - 20555266
Alignment:
Q  9 tttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaataa 105  Q
    ||||| ||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||| | |||| ||||  ||| | || |||||||||||||||     
T  20555370 ttttttattcattacataaataatgtatttggtctatattctagacaagatacatcaattattcaatgtatctaaaaaattaattttttcttataaatag 20555271  T
Q  106 gaccg 110  Q
    |||||    
T  20555270 gaccg 20555266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 38554486 - 38554598
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||| |  |  ||||| ||||||| ||||||| |  ||||| |||||||||||    
T  38554486 atttgactattttgattcattacataaataatgtatttggtctatattctataccaagtacattaattactcaatgaatttaaaaagttaactttttctt 38554585  T
Q  98 ataaataagaccg 110  Q
    ||||||| |||||    
T  38554586 ataaataggaccg 38554598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 4410813 - 4410912
Alignment:
Q  9 tttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatct--aaagtcaac-tttttcttataaata 104  Q
    ||||||||| ||| |||||||||||||||||||||||||| || | ||||||||| ||||||  |||||||||  ||||||||| |||||||||||||||    
T  4410813 tttttgatttattgcataaatgatgtatttgatctatattttaaacaagatacattaattacacaatgaatctaaaaagtcaacttttttcttataaata 4410912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 10205046 - 10204963
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa 83  Q
    |||||||| ||||||||||||  |||||||||||||||  |||||||| |||| |||||||||||||| || ||||||||||||    
T  10205046 atttgactcttttgattcattgtataaatgatgtatttagtctatattttagacaagatacatcaattgctcaatgaatctaaa 10204963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 28248961 - 28249067
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaatta-ctaatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||||||| ||| ||||||| ||||||||  ||||||||||| |  | |||||| |||||  ||||||||||  |||||||||||||||||    
T  28248961 atttgacttttttgattaattgcataaataatgtatttagtctatattctataccaaatacattaattatttaatgaatctaaaaagtcaactttttctt 28249060  T
Q  98 ataaata 104  Q
    |||||||    
T  28249061 ataaata 28249067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 28494824 - 28494757
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaatt 68  Q
    |||||| |||||||||||||| |||||||||| |||||| ||||||||||||| || |||||||||||    
T  28494824 atttgatttttttgattcattgcataaatgatatatttggtctatattctagacaatatacatcaatt 28494757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 11182193 - 11182263
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact 71  Q
    ||||||||||||||||||||| |||||||||||||||||||  |||||||| |  | ||||||||||||||    
T  11182193 atttgacttttttgattcattccataaatgatgtatttgattcatattctatatcatatacatcaattact 11182263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 35728499 - 35728561
Alignment:
Q  7 cttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaatta 69  Q
    ||||||||||||||| |||||||||| |||||| ||||||||||| | |||||||||||||||    
T  35728499 cttttttgattcattgcataaatgatatatttggtctatattctaaacaagatacatcaatta 35728561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 30761498 - 30761386
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||||||||||| || |||  ||||||||  ||||||||||||| |||||| || ||||||| ||||||| |  |||||||| | ||||||    
T  30761498 atttgacttttttgattcattgcacaaaatatgtatttagtctatattctagacaagataaattaattactcaatgaatgtaaaaagtcaaatgtttctt 30761399  T
Q  98 ataaataagaccg 110  Q
    ||||||| |||||    
T  30761398 ataaataggaccg 30761386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 39118132 - 39118051
Alignment:
Q  3 ttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa 83  Q
    ||||||||||||||| |||  |||||| ||||||||| ||||||||||||| |||||| |||||||||| |||| |||||||    
T  39118132 ttgacttttttgatttattgtataaattatgtatttggtctatattctagataagatatatcaattactcaatggatctaaa 39118051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 34447531 - 34447642
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatct--aaagtcaactttttctt 97  Q
    |||||||||||||  |||||| ||||||| ||||||||| | |||||| |||| |||||||||  |||||  |||||||||  ||| |||||||||||||    
T  34447531 atttgacttttttagttcattgcataaataatgtatttggtttatattttagacaagatacattgattacacaatgaatctaaaaaatcaactttttctt 34447630  T
Q  98 ataaataagacc 109  Q
    ||||||| ||||    
T  34447631 ataaataggacc 34447642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 36881647 - 36881547
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||||||||||||||||||| ||| ||||| ||||||||      ||||||||| ||||||| |||| ||||  |||||||| ||||||||    
T  36881647 atttgacttttttgattcattacataaataatgaatttggtctatatt------aagatacattaattactcaatgtatctaaaaagtcaaatttttctt 36881554  T
Q  98 ataaata 104  Q
    |||||||    
T  36881553 ataaata 36881547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 3837438 - 3837508
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact 71  Q
    |||||| |||||||||||||| ||||||| ||||||||| |||||||| || | |||||| ||||||||||    
T  3837438 atttgatttttttgattcattgcataaataatgtatttggtctatattttaaacaagatagatcaattact 3837508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 33273999 - 33274081
Alignment:
Q  2 tttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatctaaa 83  Q
    ||||||||||||||||||||  ||||||||| ||||||   |||||| |||| || ||||||||||||| |||||||||||||    
T  33273999 tttgacttttttgattcattgtataaatgatatatttggcttatattttagacaacatacatcaattacttaatgaatctaaa 33274081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 43714004 - 43714119
Alignment:
Q  3 ttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttat 99  Q
    |||| ||||||||||||||  |||||| ||||||||| |||||||| |||| ||||||||||||||||| | | |||||  ||||||||   ||||||||    
T  43714004 ttgatttttttgattcattgaataaattatgtatttggtctatatt-tagacaagatacatcaattactcagtaaatctaaaaagtcaaaaatttcttat 43714102  T
Q  100 aaataagaccgcaggga 116  Q
    ||||| ||||| |||||    
T  43714103 aaataggaccggaggga 43714119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 22333558 - 22333600
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatatt 48  Q
    |||||||||||||||| ||||||| ||||||||||||||||||    
T  22333558 acttttttgattcattgcataaataatgtatttgatctatatt 22333600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 29169871 - 29169975
Alignment:
Q  8 ttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaata 104  Q
    |||||| |||||||   ||||||||||||||||||||||||||| | || ||| |||||||||| ||| ||| |  |||||||| |||||||||||||||    
T  29169871 ttttttaattcattgtctaaatgatgtatttgatctatattctaaacaa-atatatcaattactcaataaatttaaaaagtcaaatttttcttataaata 29169969  T
Q  105 agaccg 110  Q
    | ||||    
T  29169970 aaaccg 29169975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 32487110 - 32487064
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatat 47  Q
    ||||||||||||||||||||| ||||||| ||||||||| |||||||    
T  32487110 atttgacttttttgattcattgcataaataatgtatttggtctatat 32487064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 920534 - 920465
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac 70  Q
    ||||||||||||||||| ||| ||||||| ||||||||  ||||||||||| | ||||||| | ||||||    
T  920534 atttgacttttttgatttatttcataaataatgtatttagtctatattctaaacaagatacgttaattac 920465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 5109483 - 5109371
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa--gtcaactttttctt 97  Q
    |||||||||||||||||||    |||||| ||||||||   |||||||||| |  | |||||| ||||||| ||||||||||||  || |||||||||||    
T  5109483 atttgacttttttgattcaaagtataaattatgtatttagcctatattctataccaaatacattaattactcaatgaatctaaaaagttaactttttctt 5109384  T
Q  98 ataaataagaccg 110  Q
    ||||||| |||||    
T  5109383 ataaataggaccg 5109371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28014393 - 28014332
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagataca 62  Q
    ||||||| ||||| ||||||| ||||||||||||||||| |||||| | |||| ||||||||    
T  28014393 atttgaccttttttattcattgcataaatgatgtatttggtctatactatagacaagataca 28014332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 37670438 - 37670370
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaatta 69  Q
    |||||| |||||| ||||||| ||||||| || |||||| | ||||||||||| ||||| |||||||||    
T  37670438 atttgatttttttaattcattgcataaataatctatttggtatatattctagataagatgcatcaatta 37670370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 45034512 - 45034406
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa--gtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||| ||||| ||||||   || ||||||||||| | ||||||||||||  || ||||||||||||||||    
T  45034512 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggttaggtacatcaattattgaatgaatctaaaaagttaactttttcttataaa 45034414  T
Q  103 taagaccg 110  Q
    || |||||    
T  45034413 taggaccg 45034406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 4063386 - 4063286
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaag--tcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||  ||||| |||||||| || ||||||||||| | ||||||||||||   | ||||||||||||||||    
T  4063386 acttttttgattcattgaatagttgatgtattttgtctat-ttctagagtaggtacatcaattattgaatgaatctaaaaaattaactttttcttataaa 4063288  T
Q  103 ta 104  Q
    ||    
T  4063287 ta 4063286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 5559633 - 5559596
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtattt 38  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  5559633 atttgatttttttgattcattgcataaatgatgtattt 5559596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 12486110 - 12486061
Alignment:
Q  3 ttgacttttttgattcattacataaatgatgtatttgatctatattctag 52  Q
    |||||||||| ||||||||  |||| ||||||||||| ||||||||||||    
T  12486110 ttgactttttagattcattgaataattgatgtatttggtctatattctag 12486061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 45571144 - 45571038
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||| ||||| ||||||   || ||||||||||| | |||||||||  ||||| || |||||||||||||    
T  45571144 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttataaa 45571046  T
Q  103 taagaccg 110  Q
    || |||||    
T  45571045 taggaccg 45571038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 45574811 - 45574705
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||| ||||| ||||||   || ||||||||||| | |||||||||  ||||| || |||||||||||||    
T  45574811 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttataaa 45574713  T
Q  103 taagaccg 110  Q
    || |||||    
T  45574712 taggaccg 45574705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 45578478 - 45578372
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||| ||||| ||||||   || ||||||||||| | |||||||||  ||||| || |||||||||||||    
T  45578478 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttataaa 45578380  T
Q  103 taagaccg 110  Q
    || |||||    
T  45578379 taggaccg 45578372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 45582145 - 45582039
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||| ||||| ||||||   || ||||||||||| | |||||||||  ||||| || |||||||||||||    
T  45582145 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttataaa 45582047  T
Q  103 taagaccg 110  Q
    || |||||    
T  45582046 taggaccg 45582039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 45585812 - 45585706
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||| ||||| ||||||   || ||||||||||| | |||||||||  ||||| || |||||||||||||    
T  45585812 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttataaa 45585714  T
Q  103 taagaccg 110  Q
    || |||||    
T  45585713 taggaccg 45585706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 45589479 - 45589373
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||| ||||| ||||||   || ||||||||||| | |||||||||  ||||| || |||||||||||||    
T  45589479 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttataaa 45589381  T
Q  103 taagaccg 110  Q
    || |||||    
T  45589380 taggaccg 45589373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 45593146 - 45593040
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||| ||||| ||||||   || ||||||||||| | |||||||||  ||||| || |||||||||||||    
T  45593146 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttataaa 45593048  T
Q  103 taagaccg 110  Q
    || |||||    
T  45593047 taggaccg 45593040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 45596813 - 45596707
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||| ||||| ||||||   || ||||||||||| | |||||||||  ||||| || |||||||||||||    
T  45596813 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttataaa 45596715  T
Q  103 taagaccg 110  Q
    || |||||    
T  45596714 taggaccg 45596707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 45600480 - 45600374
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||| ||||| ||||||   || ||||||||||| | |||||||||  ||||| || |||||||||||||    
T  45600480 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttataaa 45600382  T
Q  103 taagaccg 110  Q
    || |||||    
T  45600381 taggaccg 45600374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 45604147 - 45604041
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||| ||||| ||||||   || ||||||||||| | |||||||||  ||||| || |||||||||||||    
T  45604147 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttataaa 45604049  T
Q  103 taagaccg 110  Q
    || |||||    
T  45604048 taggaccg 45604041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 45607814 - 45607708
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||| ||||| ||||||   || ||||||||||| | |||||||||  ||||| || |||||||||||||    
T  45607814 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttataaa 45607716  T
Q  103 taagaccg 110  Q
    || |||||    
T  45607715 taggaccg 45607708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 45611481 - 45611375
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||| ||||| ||||||   || ||||||||||| | |||||||||  ||||| || |||||||||||||    
T  45611481 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttataaa 45611383  T
Q  103 taagaccg 110  Q
    || |||||    
T  45611382 taggaccg 45611375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 45615148 - 45615042
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||| ||||| ||||||   || ||||||||||| | |||||||||  ||||| || |||||||||||||    
T  45615148 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttataaa 45615050  T
Q  103 taagaccg 110  Q
    || |||||    
T  45615049 taggaccg 45615042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 5031584 - 5031472
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||||||||| |||||||||||||||| |||||||| |  ||||| || ||||||||    
T  5031584 atttgacttttttgattcattgcataaatgatgtatttagtctatattctagacaagatacatcaattacttaatgaatttaaaaagttaaatttttctt 5031485  T
Q  98 ataaataagaccg 110  Q
    ||||||| |||||    
T  5031484 ataaataggaccg 5031472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 35149696 - 35149814
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| ||||||||| ||||||  ||| |||||  ||| |||||||||||||    
T  35149696 atttgacttttttgattaattgcataaatgatgtatttggtctatattctagacaagatacattaattacacaataaatctaaaaaatcaactttttctt 35149795  T
Q  98 ataaataagaccgcaggga 116  Q
    ||||||| ||||| |||||    
T  35149796 ataaataggaccgaaggga 35149814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 8803348 - 8803236
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatct--aaagtcaactttttctt 97  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||| |||| ||| |  ||||| |||||||||||    
T  8803348 atttaacttttttgattcattacataaatgatgtatttggtctatattctagacaagatacattaattacataataaatataaaaagttaactttttctt 8803249  T
Q  98 ataaataagaccg 110  Q
     |||||| |||||    
T  8803248 gtaaatatgaccg 8803236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 24618987 - 24619103
Alignment:
Q  2 tttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct-aaagtcaactttttcttat 99  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||| |  |  ||||| ||||||| ||||||||| ||||||||||| |||||||    
T  24618987 tttgacttttttgattcattgcataaatgatgtatttggtctatattctataacaagtacattaattactcaatgaatctaaaagtcaacttgttcttat 24619086  T
Q  100 aaataagaccgcaggga 116  Q
    ||||| ||||| |||||    
T  24619087 aaatatgaccggaggga 24619103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 42122995 - 42123108
Alignment:
Q  2 tttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaa--ctttttct 96  Q
    |||||||||||||||||||| ||||||||||||||||| | ||||||||||| ||||||||| ||||||| |||||||||  ||||||||   ||||| |    
T  42122995 tttgacttttttgattcattgcataaatgatgtatttggtatatattctagacaagatacattaattactcaatgaatctaaaaagtcaatttttttttt 42123094  T
Q  97 tataaataagaccg 110  Q
    ||||||||||||||    
T  42123095 tataaataagaccg 42123108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 16448817 - 16448922
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||||||||||| |||||||||| |||||| | ||||||||| | ||||||||||||||||| |||||||||  ||||| || ||||||||    
T  16448817 atttgacttttttgattcattgcataaatgatatatttggtttatattctatataagatacatcaattactcaatgaatctaaaaagttaaatttttctt 16448916  T
Q  98 ataaat 103  Q
    ||||||    
T  16448917 ataaat 16448922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 8453623 - 8453728
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||||| |||||||||||||||||||||| |||||||| |||||||||||||| |||||| |||||||||| |||| ||||  ||| |||| ||||||||    
T  8453623 atttgaattttttgattcattacataaataatgtattt-atctatattctagacaagatatatcaattactcaatgtatctaaaaaatcaaatttttctt 8453721  T
Q  98 ataaata 104  Q
    |||||||    
T  8453722 ataaata 8453728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 8793839 - 8793733
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa--gtcaactttttctt 97  Q
    ||||||||||||||||||||| ||||||||||||||||  |||||||| ||||  | |||||||||||||| ||||||||||||   ||||||||| |||    
T  8793839 atttgacttttttgattcattgcataaatgatgtatttagtctatattatagaccaaatacatcaattactcaatgaatctaaaatatcaacttttactt 8793740  T
Q  98 ataaata 104  Q
    |||||||    
T  8793739 ataaata 8793733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 7693061 - 7693173
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||| |||||||||||||||| ||||||||||||||||  |||||||| || |  | |||||| ||||||| |||||||||  |||||||| ||||||||    
T  7693061 attttacttttttgattcattgcataaatgatgtatttagtctatattttataccaaatacattaattactcaatgaatctaaaaagtcaattttttctt 7693160  T
Q  98 ataaataagaccg 110  Q
    ||||||| |||||    
T  7693161 ataaataggaccg 7693173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 10184579 - 10184685
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||| |||||||  |||||||||||||||| |||||||||| ||  | |||||||||||| | |||||||||  |||||| | ||||||||    
T  10184579 atttgactttttttattcattgtataaatgatgtatttggtctatattctggatcatatacatcaattattcaatgaatctaaaaagtcgattttttctt 10184678  T
Q  98 ataaata 104  Q
    |||||||    
T  10184679 ataaata 10184685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 1223242 - 1223125
Alignment:
Q  2 tttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa--gtcaactttttctta 98  Q
    ||||||| |||| ||||||| ||||||| ||||||||| |||||||| | || ||||||||| ||||||  ||||||||||||  ||||  |||||||||    
T  1223242 tttgactattttaattcattgcataaattatgtatttggtctatatttttgacaagatacattaattacacaatgaatctaaaaagtcacttttttctta 1223143  T
Q  99 taaataagaccgcaggga 116  Q
    |||||| ||||| |||||    
T  1223142 taaatatgaccggaggga 1223125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 34711196 - 34711091
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaa 102  Q
    |||||||||||| ||| ||| ||||||||||||  | |||||| |||| || |||||||||||||| |||||||||  |||||||| ||||| |||||||    
T  34711196 acttttttgatttattgcattaatgatgtatttagtttatattttagacaaaatacatcaattactcaatgaatctaaaaagtcaatttttttttataaa 34711097  T
Q  103 taagac 108  Q
    ||||||    
T  34711096 taagac 34711091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 40483311 - 40483381
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact 71  Q
    |||| |||||||| ||||||| ||||||||||||||||| || |||||||||| |||||| ||||||||||    
T  40483311 atttaacttttttaattcattgcataaatgatgtatttggtccatattctagataagatatatcaattact 40483381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 10839875 - 10839777
Alignment:
Q  9 tttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaata 104  Q
    ||||||||||||| ||||||||||||||||| ||||||||||| |  |  ||||| ||||| | |||||||||  |||||||| |||||||||||||||    
T  10839875 tttttgattcattgcataaatgatgtatttggtctatattctataccaagtacattaattattcaatgaatctaaaaagtcaattttttcttataaata 10839777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 15720319 - 15720249
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact 71  Q
    |||| |||||||||||||||| ||||||| |||||||||||||||||| || |  | ||||||||||||||    
T  15720319 atttaacttttttgattcattccataaataatgtatttgatctatattttataacaaatacatcaattact 15720249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 30255829 - 30255783
Alignment:
Q  25 taaatgatgtatttgatctatattctagagaagatacatcaattact 71  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||    
T  30255829 taaatgatgtatttgatatatattctagacaagatacatcaattact 30255783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 16008551 - 16008663
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatcta--aagtcaactttttctt 97  Q
    ||||||||||||| ||  ||| ||||||| ||||||||| || |||||||||| || ||||||||| |||| ||| ||||||  ||||||| ||||||||    
T  16008551 atttgacttttttaatctattgcataaataatgtatttggtcaatattctagacaaaatacatcaagtactcaataaatctaagaagtcaaatttttctt 16008650  T
Q  98 ataaataagaccg 110  Q
    ||| ||| |||||    
T  16008651 atagataggaccg 16008663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 24821919 - 24821981
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacat 63  Q
    |||| |||||||| ||| ||||||||||| |||||||| || ||||||||||| |||||||||    
T  24821919 atttaacttttttaatttattacataaataatgtatttaatatatattctagacaagatacat 24821981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 43332681 - 43332568
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttga-tctatattctagagaagatacatcaattact-aatgaatctaaa--gtcaactttttct 96  Q
    |||||| |||||||||||||| |||||||||||| |||   |||  |||||||| |||||| || ||||||| ||||||||||||  |||||  ||||||    
T  43332681 atttgatttttttgattcattgcataaatgatgtttttttgtcttcattctagacaagatatattaattactcaatgaatctaaaaagtcaaaattttct 43332582  T
Q  97 tataaataagaccg 110  Q
    |||||||| |||||    
T  43332581 tataaataggaccg 43332568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 36191775 - 36191857
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaag 84  Q
    |||||||||||||  |||||| |||||||||||||||||   |||||| || | ||||||||||||||| | |||||||||||||    
T  36191775 atttgacttttttctttcattgcataaatgatgtatttg--gtatattttatacaagatacatcaattattcaatgaatctaaag 36191857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 883653 - 883752
Alignment:
Q  8 ttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa--gtcaactttttcttataaata 104  Q
    |||||| |||| || |||||||||| |||||||| |||||| |||| || ||| || ||||||  ||| ||||||||  |||||||||||||||||||||    
T  883653 ttttttaattcgttgcataaatgatatatttgatttatattttagacaaaatatattaattacacaatcaatctaaaaagtcaactttttcttataaata 883752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 3236450 - 3236382
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaatta 69  Q
    ||||||||||||| |||||||  |||||||||||||||| |||| ||| || |  ||||||||||||||    
T  3236450 atttgacttttttaattcattgtataaatgatgtatttggtctaaattttaaactagatacatcaatta 3236382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 6899534 - 6899428
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||||||||| ||||||   || ||||||||||| | |||||||||  ||||| || |||||||||||||    
T  6899534 acttttttgattcattgaatagttgatgtatttgatctat-ttctaggttaggtacatcaattattgaatgaatctcaaaagttaaatttttcttataaa 6899436  T
Q  103 taagaccg 110  Q
    || |||||    
T  6899435 taggaccg 6899428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 15726809 - 15726893
Alignment:
Q  23 cataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa--gtcaactttttcttataaata 104  Q
    ||||||||||||||||  | |||||| || | ||||||  ||||||||| ||||||||||||  ||||| |||||||||||||||    
T  15726809 cataaatgatgtattttgtatatattttaaacaagataagtcaattactcaatgaatctaaaaagtcaattttttcttataaata 15726893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 36366058 - 36366164
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||| ||||| ||||||   || ||||||||||| | |||||||||  ||| | ||||||||||||||||    
T  36366058 acttttttgattcattcaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaaattaactttttcttataaa 36366156  T
Q  103 taagaccg 110  Q
    || |||||    
T  36366157 taggaccg 36366164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 44796456 - 44796350
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa--gtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||| ||||| ||||||   |  ||||||||||| | ||||||||||||  || ||||||||||||||||    
T  44796456 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctatgtacatcaattattgaatgaatctaaaaagttaactttttcttataaa 44796358  T
Q  103 taagaccg 110  Q
    || |||||    
T  44796357 taggaccg 44796350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 54537561 - 54537457
Alignment:
Q  3 ttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttat 99  Q
    ||||||||||||||||||| |||||||  ||||||||||||||||||||||  |||||||||||||||| |||||||||  |||||||| ||||||||||    
T  54537561 ttgacttttttgattcattgcataaattgtgtatttgatctatattctagactagatacatcaattactcaatgaatcttaaaagtcaaatttttcttat 54537462  T
Q  100 aaata 104  Q
    |||||    
T  54537461 aaata 54537457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 23222986 - 23223097
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct-aaagtcaactttttctta 98  Q
    ||||||||||||| ||| |||| |||||||||||||||| |||||||| |||| ||||||||||| ||||| ||||||||| ||| |||| |||||||||    
T  23222986 atttgacttttttaatttattatataaatgatgtatttggtctatattttagacaagatacatcagttactcaatgaatctaaaaatcaattttttctta 23223085  T
Q  99 taaataagaccg 110  Q
    |||||| |||||    
T  23223086 taaatatgaccg 23223097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 21663006 - 21662888
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||| |||||||||||||||| ||||||||||||||||| |||||| |||| |  |  ||||| ||||||| |||||||||  |||||||||||||||||    
T  21663006 atttaacttttttgattcattgcataaatgatgtatttggtctataatctataccaagtacattaattactcaatgaatctaaaaagtcaactttttctt 21662907  T
Q  98 ataaataagaccgcaggga 116  Q
    ||||||| ||||| |||||    
T  21662906 ataaataggaccggaggga 21662888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 25954051 - 25954133
Alignment:
Q  2 tttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa 83  Q
    |||||||||||| |||||||| ||||||||| |||||||||||||||||||| ||||||||| ||||||| ||||||| ||||    
T  25954051 tttgacttttttaattcattatataaatgatatatttgatctatattctagacaagatacattaattactcaatgaatttaaa 25954133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 44518155 - 44518050
Alignment:
Q  2 tttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctta 98  Q
    ||||||||||||||||||||   ||||||||||||||| |||||||| |||| ||||||||| ||||||| |||||||||  ||||||||  ||||||||    
T  44518155 tttgacttttttgattcattgtctaaatgatgtatttggtctatattttagacaagatacattaattactcaatgaatctaaaaagtcaaagttttctta 44518056  T
Q  99 taaata 104  Q
    ||||||    
T  44518055 taaata 44518050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 52865069 - 52864964
Alignment:
Q  3 ttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttat 99  Q
    ||||||||||||||||||| |||||||||| |||||  |||||||| |||| ||||||||||||||||| |||||||||  ||||| || ||||||| ||    
T  52865069 ttgacttttttgattcattgcataaatgatatatttagtctatattttagataagatacatcaattactcaatgaatctaaaaagttaaatttttctcat 52864970  T
Q  100 aaataa 105  Q
    ||||||    
T  52864969 aaataa 52864964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 9236207 - 9236128
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatc 79  Q
    |||||||||||||||||||||||||||||||| |||||  ||||||||||| |  |||||||||||||||| ||||||||    
T  9236207 atttgacttttttgattcattacataaatgatatatttagtctatattctatatcagatacatcaattactcaatgaatc 9236128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 43449078 - 43448972
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||||| ||||||| ||||||  |||||||||||||||| | |||||  |||| |||||| |||||||||| |||||||||  ||| |||||||||||||    
T  43449078 atttgatttttttggttcattgtataaatgatgtatttggtttatatcatagacaagatatatcaattactcaatgaatctaaaaaatcaactttttctt 43448979  T
Q  98 ataaata 104  Q
    |||||||    
T  43448978 ataaata 43448972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 51517077 - 51516960
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattcta-gagaagatacatcaattactaatgaatct--aaagtcaactttttctt 97  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||||||||| |  ||| ||||| |||||||    |||||  |||||||||||||||||    
T  51517077 atttgacttttttggttcattgcataaatgatgtatttggtctatattctatgccaag-tacattaattactccataatctaaaaagtcaactttttctt 51516979  T
Q  98 ataaataagaccgcaggga 116  Q
    ||||||| ||||| |||||    
T  51516978 ataaataggaccggaggga 51516960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 12747725 - 12747837
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||||| |||||||||||||| |||||||  |||||||| | |||||||||||  | ||||||||||||||  ||||||||  ||| |||| ||||||||    
T  12747725 atttgatttttttgattcattgcataaattgtgtatttggtgtatattctagaccaaatacatcaattactcgatgaatctaaaaaatcaattttttctt 12747824  T
Q  98 ataaataagaccg 110  Q
    ||||||| |||||    
T  12747825 ataaataggaccg 12747837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 35099083 - 35099195
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatctaaa--gtcaactttttctt 97  Q
    |||| |||||||| ||| |||  |||||||||||||||| ||||||||||||| |||||| || ||||||  ||| ||| ||||  ||||||||||||||    
T  35099083 atttaacttttttaatttattgtataaatgatgtatttggtctatattctagacaagatatattaattacacaataaatttaaaaggtcaactttttctt 35099182  T
Q  98 ataaataagaccg 110  Q
    ||||||| |||||    
T  35099183 ataaataggaccg 35099195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 36985275 - 36985208
Alignment:
Q  2 tttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaatta 69  Q
    |||||||||||||||||||| ||||||| ||||||||  ||||||||||| | ||||||||| |||||    
T  36985275 tttgacttttttgattcattgcataaataatgtatttagtctatattctaaacaagatacattaatta 36985208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 37010714 - 37010647
Alignment:
Q  2 tttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaatta 69  Q
    |||||||||||||||||||| ||||||| ||||||||  ||||||||||| | ||||||||| |||||    
T  37010714 tttgacttttttgattcattgcataaataatgtatttagtctatattctaaacaagatacattaatta 37010647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 51723498 - 51723392
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||| ||||||||||||||||  ||||||||| |||||  ||||||||||| |  | |||||| ||||||| |||||||||  ||| |||||||||||||    
T  51723498 atttaacttttttgattcattgtataaatgatatatttagtctatattctatatcaaatacattaattactcaatgaatctaaaaaatcaactttttctt 51723399  T
Q  98 ataaata 104  Q
    |||||||    
T  51723398 ataaata 51723392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 53441935 - 53442053
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||| |||||||||||||||| ||||||||||||||||| | || |||||| |  |  ||||| ||||| | ||||||| |  |||||||||||||||||    
T  53441935 attttacttttttgattcattgcataaatgatgtatttggtatacattctataccaagtacattaattattcaatgaatttaaaaagtcaactttttctt 53442034  T
Q  98 ataaataagaccgcaggga 116  Q
    ||||||| ||||| |||||    
T  53442035 ataaataggaccggaggga 53442053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9197109 - 9197159
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattcta 51  Q
    ||||||||||||||||||||| ||||||||||||||||  |||||||||||    
T  9197109 atttgacttttttgattcattgcataaatgatgtattttgtctatattcta 9197159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20028499 - 20028548
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattcta 51  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  20028499 atttgactttttt-attcatttcataaatgatgtatttgatctatattcta 20028548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 53357321 - 53357429
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact--aatgaatct--aaagtcaactttttcttataa 101  Q
    |||||||| ||| ||| |||||||||| |||||| ||||||||||||| |||||| ||||||||||  ||| |||||  ||||||||  |||||||| ||    
T  53357321 acttttttaatttattgcataaatgatatatttggtctatattctagacaagatagatcaattactccaataaatctaaaaagtcaatgttttcttacaa 53357420  T
Q  102 ataagaccg 110  Q
    ||| |||||    
T  53357421 ataggaccg 53357429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 12064937 - 12065041
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatct--aaagtcaactttttctt 97  Q
    |||| |||||||||||||||| ||| ||||||||||||| ||||||||||| |  | ||| || |||||| |||||||| |  |||||||| ||||||||    
T  12064937 attttacttttttgattcattgcattaatgatgtatttggtctatattctatactaaatatattaattacttaatgaatttaaaaagtcaattttttctt 12065036  T
Q  98 ataaa 102  Q
    |||||    
T  12065037 ataaa 12065041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 19649607 - 19649690
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa 83  Q
    |||||||||||||||||||||  |||| ||||||||||  |||||||| ||||    |||||||||||||| ||||||||||||    
T  19649607 atttgacttttttgattcattgaataattgatgtatttagtctatattttagaccgaatacatcaattactcaatgaatctaaa 19649690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 8266351 - 8266270
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa 83  Q
    |||||||||||||||||||||  |||||| |||| ||||   |||||| |||| || |||||||||||||| ||||||||||||    
T  8266351 atttgacttttttgattcattgtataaataatgtgtttg--gtatattttagataaaatacatcaattactcaatgaatctaaa 8266270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 45010778 - 45010846
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaatta 69  Q
    ||||||||||||||||| |||  ||||||||||| | || ||||||||||| |  ||||||||||||||    
T  45010778 atttgacttttttgatttattgtataaatgatgtttgtggtctatattctaaactagatacatcaatta 45010846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 40460443 - 40460353
Alignment:
Q  24 ataaatgatgtatttgatctatattctagagaagataca-tcaattac-taatgaatct--aaagtcaactttttcttataaataagaccg 110  Q
    |||||||||||||||| |||||||| || | |||||||| | ||||||  |||||||||  ||||| || |||||||||||||||||||||    
T  40460443 ataaatgatgtatttggtctatattttaaacaagatacatttaattacacaatgaatctaaaaagttaattttttcttataaataagaccg 40460353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 13622515 - 13622577
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacat 63  Q
    |||||||||||||  |||||| |||||||||| |||||| |||||||| || | |||||||||    
T  13622515 atttgacttttttagttcattgcataaatgatatatttggtctatattttacacaagatacat 13622577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 29457873 - 29457973
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||| ||||| |||||||  || ||||||||| | | |||||||||  ||||| ||||||||||||||||    
T  29457873 acttttttgattcattgaatagttgatgtatttggtctat-ttctagactaggtacatcaatcattgaatgaatctaaaaagttaactttttcttataaa 29457971  T
Q  103 ta 104  Q
    ||    
T  29457972 ta 29457973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 47720789 - 47720739
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattcta 51  Q
    |||||| ||||| ||||||||||||||||||| |||||| | |||||||||    
T  47720789 atttgattttttcgattcattacataaatgatatatttggtttatattcta 47720739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 18473595 - 18473512
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa 83  Q
    |||||||||||||||||||||  |||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  18473595 atttgacttttttgattcattgtataaatgatgcatttgatctatattctagacaagatacatcaattactcaatgaatctaaa 18473512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 5002168 - 5002251
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa 83  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||||||||||||||| ||| ||||||||    
T  5002168 atttgacttttttgattaattgcataaatgatgtatttgatctatattttagacaagatacatcaattactcaataaatctaaa 5002251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 36434706 - 36434818
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatct--aaagtcaactttttctt 97  Q
    |||||| |||||| |||||||||||||||||| |||||| | |||||| |||| |||||||||||||||| ||||||||||  ||||| || ||||||||    
T  36434706 atttgattttttttattcattacataaatgatatatttggtttatattttagacaagatacatcaattacttaatgaatctaaaaagttaaatttttctt 36434805  T
Q  98 ataaataagaccg 110  Q
    |||||||| ||||    
T  36434806 ataaataaaaccg 36434818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 919670 - 919753
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa 83  Q
    |||||||||||||||||||||  |||||||||||||||| ||||||||||| |  |||||||||||||||| ||||||||||||    
T  919670 atttgacttttttgattcattcaataaatgatgtatttggtctatattctatactagatacatcaattactcaatgaatctaaa 919753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 33478227 - 33478144
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa 83  Q
    ||||||| ||||||||||||| |||||||||||||||||  ||||||||||||  |||||||||||||||| ||||||||||||    
T  33478227 atttgacatttttgattcattgcataaatgatgtatttggcctatattctagacgagatacatcaattactcaatgaatctaaa 33478144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 34297202 - 34297285
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatctaaa 83  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||||| |||| |||| ||||||||||| |||||||||||||    
T  34297202 atttgacttttttaattcattgcataaatgatgtaattgatctatattttagacaagacacatcaattacttaatgaatctaaa 34297285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 22102028 - 22101921
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||||||| |||  |||||| |||||||||||||||||| |||| ||||||||| ||||||  |||||||||  ||| |||| ||||||||    
T  22102028 atttgacttttttgatttattgtataaataatgtatttgatctatattttagacaagatacattaattacacaatgaatctaaaaaatcaaatttttctt 22101929  T
Q  98 ataaataa 105  Q
    ||||||||    
T  22101928 ataaataa 22101921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 1248942 - 1248841
Alignment:
Q  8 ttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattactaatgaatctaaagtcaactttttcttataaataaga 107  Q
    |||||| |||||||  |||||||||||||||||||||||||||||| ||||||||||       ||||||||||||||| | ||||||||||||| | ||    
T  1248942 tttttttattcatttgataaatgatgtatttgatctatattctagacaagatacatc-------aatgaatctaaagtctaatttttcttataaaaagga 1248850  T
Q  108 ccgcaggga 116  Q
    ||| |||||    
T  1248849 ccggaggga 1248841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 11932083 - 11931971
Alignment:
Q  8 ttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatct--aaagtcaa-ctttttcttataaat 103  Q
    |||||||||| |||| |||||||||||||||| |||||||| |||| ||||||||| ||||||  |||||||||  ||||||||  ||||||||||||||    
T  11932083 ttttttgatttattatataaatgatgtatttggtctatattttagacaagatacattaattacacaatgaatctaaaaagtcaatttttttcttataaat 11931984  T
Q  104 aagaccgcaggga 116  Q
    | ||||| |||||    
T  11931983 aggaccggaggga 11931971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 36286089 - 36286170
Alignment:
Q  3 ttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa 83  Q
    |||| |||||||||||||| ||||||||||||| ||| ||||||||||||| | ||||||||||||||| ||| ||||||||    
T  36286089 ttgatttttttgattcattgcataaatgatgtagttggtctatattctagacatgatacatcaattactcaattaatctaaa 36286170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 16619136 - 16619026
Alignment:
Q  3 ttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct---aaagtcaactttttctta 98  Q
    ||||| ||||||||| ||| |||||||||| |||||| ||| ||||||||| | ||||||||||||||| || ||||||   ||| |||| |||||||||    
T  16619136 ttgacgtttttgatttattgcataaatgatatatttggtctctattctagacatgatacatcaattactcaacgaatctaaaaaaatcaaatttttctta 16619037  T
Q  99 taaataagacc 109  Q
    |||||||||||    
T  16619036 taaataagacc 16619026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 29299478 - 29299359
Alignment:
Q  1 atttgacttttttga-ttcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttct 96  Q
    ||||||||||||||| ||||||  |||||||||||||| | |||||||| |||| || |||||||||| ||| |||||||||  ||| |||| |||||||    
T  29299478 atttgacttttttgaattcattgtataaatgatgtattcggtctatattttagacaaaatacatcaatcactcaatgaatctaaaaaatcaaatttttct 29299379  T
Q  97 tataaataagaccgcaggga 116  Q
    |||||||| ||||| |||||    
T  29299378 tataaataggaccggaggga 29299359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 13789760 - 13789866
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||| |||||||||||||||| ||||||||||||||||| |||| |||||| |  |  ||||| ||||| | |||||||||  |||||||||||||||||    
T  13789760 attttacttttttgattcattgcataaatgatgtatttggtctacattctataccaagtacattaattattcaatgaatctgaaaagtcaactttttctt 13789859  T
Q  98 ataaata 104  Q
    |||||||    
T  13789860 ataaata 13789866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 18391526 - 18391593
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaatt 68  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||| || | ||||||||| ||||    
T  18391526 atttgacttttttgattcattgcataaataatgtatttgatctatattataaacaagatacattaatt 18391593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 21488311 - 21488417
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||| ||||||| ||||||| ||||||||| ||||||||||||| || |||||| |||||| |||||| | |  ||| | |||||||||||    
T  21488311 atttgacttttttaattcattgcataaataatgtatttggtctatattctagacaaaatacattaattacataatgagtttaaaaaattaactttttctt 21488410  T
Q  98 ataaata 104  Q
    |||||||    
T  21488411 ataaata 21488417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 13664974 - 13665073
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaagtcaactttttcttat 99  Q
    ||||||||||||| ||| ||| ||||||||||||||||||||||||||||| | || ||||    |||||| ||||||||| ||||||| || |||||||    
T  13664974 atttgacttttttaattaattgcataaatgatgtatttgatctatattctaaacaacatac----attactcaatgaatct-aagtcaaattgttcttat 13665068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 38394548 - 38394442
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||| |||||||||||||||| ||||||||||||||||| |||| |||||| |  |  ||||| ||||| | |||||||||  |||||||| ||||||||    
T  38394548 attttacttttttgattcattgcataaatgatgtatttggtctacattctataccaagtacattaattattcaatgaatctaaaaagtcaattttttctt 38394449  T
Q  98 ataaata 104  Q
    |||||||    
T  38394448 ataaata 38394442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 32452264 - 32452325
Alignment:
Q  9 tttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac 70  Q
    ||||||||||||| |||||||  |||||||| ||||||||||||| ||| ||||| ||||||    
T  32452264 tttttgattcattgcataaatattgtatttggtctatattctagacaagctacattaattac 32452325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 39239909 - 39239832
Alignment:
Q  7 cttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac-taatgaatctaaa 83  Q
    ||||||| ||||||| ||||||| || |||||||||||||||| | | ||||||||| ||||||  ||||||||||||    
T  39239909 ctttttttattcattgcataaataatatatttgatctatattcaatacaagatacattaattacacaatgaatctaaa 39239832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 14221873 - 14221920
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatatt 48  Q
    ||||||||||||||||| ||| |||||||||| |||||||| ||||||    
T  14221873 atttgacttttttgattaattgcataaatgatatatttgatttatatt 14221920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 10228187 - 10228116
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtat----ttgatctatattctagagaagatacatcaatt 68  Q
    |||||||||||||||||||||  |||||||||||||    |  || ||||||||||| ||||||||||||||    
T  10228187 atttgacttttttgattcattgtataaatgatgtatctcgtctatatatattctagacaagatacatcaatt 10228116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 29031070 - 29031182
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa--gtcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||| ||||| ||||||   || ||||||||||  | ||||||||||||  || ||||||||||||||||    
T  29031070 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattgttgaatgaatctaaaaagttaactttttcttataaa 29031168  T
Q  103 taagaccgcaggga 116  Q
    || ||||| |||||    
T  29031169 taggaccggaggga 29031182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 18718354 - 18718252
Alignment:
Q  8 ttttttgattcattacataaatgatgtatt---tgatctatattctagagaagatacatcaattact-aatgaatctaaa--gtcaactttttcttataa 101  Q
    |||||||||| ||| |||||||||| ||||   || ||||||||||||| ||||||||| ||||||| ||| ||| ||||  || || ||||||||||||    
T  18718354 ttttttgatttattgcataaatgatatattatttggtctatattctagacaagatacattaattactcaataaatttaaaatgttaaatttttcttataa 18718255  T
Q  102 ata 104  Q
    |||    
T  18718254 ata 18718252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 15968425 - 15968319
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaag--tcaactttttcttataaa 102  Q
    ||||||||||||||||  |||  ||||||||||| ||||| ||||||   |||||||| ||||| | ||||||||||||   | ||||||||||||||||    
T  15968425 acttttttgattcattgaatagttgatgtatttggtctat-ttctaggctagatacattaattattgaatgaatctaaaaaattaactttttcttataaa 15968327  T
Q  103 taagaccg 110  Q
    || |||||    
T  15968326 taggaccg 15968319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 30627943 - 30627831
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||| ||||||||| ||||||||||||||||| |||||||| |||| ||||||||||||||||| ||| ||| |  ||| |||| ||||||||    
T  30627943 atttgacttttctgattcattgcataaatgatgtatttggtctatattttagacaagatacatcaattactcaataaatataaaaaatcaaatttttctt 30627844  T
Q  98 ataaataagaccg 110  Q
    |||||||||||||    
T  30627843 ataaataagaccg 30627831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 17265749 - 17265861
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||||||||||||||||| ||||||||| ||||||  ||||||||||||| |||||||||||||||||  |||||| |  ||| |||| ||||||||    
T  17265749 atttgacttttttgattcattgcataaatgacgtatttagtctatattctagacaagatacatcaattactcgatgaatttaaaaaatcaaatttttctt 17265848  T
Q  98 ataaataagaccg 110  Q
    ||||||| |||||    
T  17265849 ataaatatgaccg 17265861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 28630871 - 28630761
Alignment:
Q  3 ttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaat--ctaaagtcaactttttcttat 99  Q
    |||||||||| |||||||| ||||||| ||||||||| |||||||| |||| ||||||||||||||||| |||||||    |||||||| ||||||||||    
T  28630871 ttgactttttagattcattgcataaattatgtatttggtctatattatagacaagatacatcaattactcaatgaataaaaaaagtcaaatttttcttat 28630772  T
Q  100 aaataagaccg 110  Q
    ||||| |||||    
T  28630771 aaataggaccg 28630761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 2972276 - 2972172
Alignment:
Q  9 tttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaataa 105  Q
    ||||||||||||| ||||||||||||||||  |||||||| |||| |||||||| |||||||| ||| |||||  |||||||| ||| ||||||||||||    
T  2972276 tttttgattcattgcataaatgatgtattttgtctatattttagataagatacaccaattactcaataaatctaaaaagtcaaatttctcttataaataa 2972177  T
Q  106 gaccg 110  Q
    |||||    
T  2972176 gaccg 2972172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 9077706 - 9077637
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattac 70  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||||||||||||| ||||||||| ||||||    
T  9077706 atttgacttttttgattcattgcataaatgatgcatttggtctatattctagacaagatacattaattac 9077637  T

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Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 12999783 - 12999902
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct---aaagtcaactttttct 96  Q
    |||| |||||||||||||||| |||||| |||||||||||||||||||||| |  |  ||||| ||||||| |||||||||   ||||||||||||| ||    
T  12999783 atttaacttttttgattcattgcataaaagatgtatttgatctatattctataccaagtacattaattactcaatgaatctgaaaaagtcaacttttact 12999882  T
Q  97 tataaataagaccgcaggga 116  Q
    ||||||||||| || |||||    
T  12999883 tataaataagatcggaggga 12999902  T

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Target: chr6; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 2230382 - 2230495
Alignment:
Q  6 acttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaa 102  Q
    ||||| ||||||| ||  |||||||||||| ||| ||||||||||||| ||||||||| ||||||| |||||||||  ||||||||  ||||||||||||    
T  2230382 actttattgattcgttgaataaatgatgtacttggtctatattctagacaagatacattaattactcaatgaatctaaaaagtcaaagttttcttataaa 2230481  T
Q  103 taagaccgcaggga 116  Q
    || ||||| |||||    
T  2230482 taggaccggaggga 2230495  T

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Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 12450471 - 12450403
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaatta 69  Q
    ||||||||||||| ||||||| |||||||||||||||| ||||||||| |||| || ||||||||||||    
T  12450471 atttgacttttttaattcattgcataaatgatgtatttaatctatattttagataaaatacatcaatta 12450403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 10283322 - 10283392
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact 71  Q
    ||||||||||||||||||||   |||||||||||||||||| |||||| |||| |  ||||||||||||||    
T  10283322 atttgacttttttgattcatggtataaatgatgtatttgatatatattttagacagtatacatcaattact 10283392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 27909095 - 27909025
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact 71  Q
    ||||||||||||| |||||||  |||| |||||||||||||||||||| ||||   |||||||||||||||    
T  27909095 atttgacttttttaattcattgaataattgatgtatttgatctatattttagaccggatacatcaattact 27909025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30895304 - 30895254
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattcta 51  Q
    ||||||||||||||||||||| |||||||||| |||||| |||||||||||    
T  30895304 atttgacttttttgattcattgcataaatgatatatttggtctatattcta 30895254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 3065003 - 3064935
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaatta 69  Q
    |||| |||||||||||||||| |||||||| |||||||| |||||||| || | ||||||||| |||||    
T  3065003 attttacttttttgattcattgcataaatggtgtatttggtctatattttatacaagatacattaatta 3064935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 28863430 - 28863372
Alignment:
Q  11 tttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaatta 69  Q
    ||||||| ||| ||||||||||||||||| | ||||||||||| ||||||||| |||||    
T  28863430 tttgatttattgcataaatgatgtatttggtttatattctagacaagatacataaatta 28863372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 3046733 - 3046681
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctaga 53  Q
    ||||||||||||| ||||||||| |||||||||||| || |||||||| ||||    
T  3046733 atttgacttttttaattcattacttaaatgatgtatgtggtctatattgtaga 3046681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 33119932 - 33120036
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    ||||||||| |||||||||||  ||||||| |||||||| |||||||  | || |||||||||| |||| | |||||||||  ||||||||  |||||||    
T  33119932 atttgacttctttgattcattgtataaatgttgtatttggtctatat--ttgacaagatacatcgattattcaatgaatctaaaaagtcaaaattttctt 33120029  T
Q  98 ataaata 104  Q
    |||||||    
T  33120030 ataaata 33120036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 8052976 - 8052911
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaa 66  Q
    ||||||||||||| |||||||  | |||| ||||||||  ||| ||||||||| ||||||||||||    
T  8052976 atttgacttttttaattcattgtacaaataatgtatttagtctttattctagacaagatacatcaa 8052911  T

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Target: scaffold0086 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 1556 - 1482
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattactaatga 76  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  1556 atttgacttttttgattcatg-cataaatgatgtatttgatctatattctagacaagatatatcaattactaatga 1482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 1561 - 1678
Alignment:
Q  1 atttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttctt 97  Q
    |||||||||||||||||| || ||||||||||| |||||||||||| ||||||  | |||||||||||| | |||||||||  ||| | || ||||||||    
T  1561 atttgacttttttgattcgttgcataaatgatgcatttgatctatactctagacta-atacatcaattattcaatgaatctaaaaaattaattttttctt 1659  T
Q  98 ataaataagaccgcaggga 116  Q
    ||||||||||||| |||||    
T  1660 ataaataagaccggaggga 1678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 16648 - 16541
Alignment:
Q  2 tttgacttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaat--ctaaagtcaactttttctta 98  Q
    ||||||||||||||||||||  |||||| ||||||||| ||||||||||||  ||||| ||||||||||| |||||||    ||||| || |||||||||    
T  16648 tttgacttttttgattcattgtataaataatgtatttggtctatattctagtcaagatgcatcaattactcaatgaattaaaaaagttaaatttttctta 16549  T
Q  99 taaataag 106  Q
    ||||||||    
T  16548 taaataag 16541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 28124 - 28235
Alignment:
Q  8 ttttttgattcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatct--aaagtcaactttttcttataaata 104  Q
    |||| ||||||||| |||||||||||||||||||||||||| |||| |||||| |||||||| | ||| ||| |  |||||||| ||||||||||| |||    
T  28124 ttttgtgattcattgcataaatgatgtatttgatctatattttagacaagatatatcaattattcaataaattttaaaagtcaaatttttcttatatata 28223  T
Q  105 agaccgcaggga 116  Q
     ||||| |||||    
T  28224 ggaccggaggga 28235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 40266 - 40181
Alignment:
Q  1 atttgacttttttgattcattacataaa-tgatgtatttgatctatattctagagaagatacatcaattac-taatgaatctaaag 84  Q
    |||||| |||||| ||||||| |||||| ||||||||||| |||||||| || |  ||||||||||||||| ||||||||||||||    
T  40266 atttgatttttttaattcattccataaaatgatgtatttggtctatattttatatcagatacatcaattacataatgaatctaaag 40181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 3802 - 3722
Alignment:
Q  42 ctatattctagagaagatacatcaattact-aatgaatctaaa--gtcaactttttcttataaataagaccgcagggaata 119  Q
    |||||||||||| || |||||||||||||| ||| ||| ||||  ||||| ||||||||||| ||||||||| ||||||||    
T  3802 ctatattctagacaaaatacatcaattactcaataaatgtaaaaagtcaaatttttcttatatataagaccggagggaata 3722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 2609 - 2541
Alignment:
Q  16 ttcattacataaatgatgtatttgatctatattctagagaagatacatcaattact-aatgaatctaaa 83  Q
    |||||| |||||| |||||||||||||||||||||| |  | |||||| ||||||| ||||||||||||    
T  2609 ttcattgcataaacgatgtatttgatctatattctatatcaaatacattaattactcaatgaatctaaa 2541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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