View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4193_low_35 (Length: 304)
Name: NF4193_low_35
Description: NF4193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4193_low_35 |
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Alignment Details
Target: chr5 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 7 - 291
Target Start/End: Original strand, 6632178 - 6632462
Alignment:
| Q |
7 |
atagtatggtattttaaaagcattttattttgtgcattagttatatttatagtttaacgttttgaaacaaatatttctttcatcctataaaaatattttt |
106 |
Q |
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| T |
6632178 |
atagtatggtattttaaaagcattttattttgtgcattagttatatttatagtttaacgttttgaaacaaatatttctttcatcctataaaaatattttt |
6632277 |
T |
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| Q |
107 |
tataaggaacccggaaaactgtttctttcgtcctaatgcatggcttggaagtctcctctgtctcttacatatgtttgtgaatatgagcttccatagggac |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
6632278 |
tataaggaacccggaaaactgtttctttcgtcctaatgcatggcttggaagtctcctctgtctcttacatatgtttgtgaatatgagcttccacagggac |
6632377 |
T |
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| Q |
207 |
atcctcgatcggtcattatatctaaggttttcattgtcacattagaacttttctgttgtggatgttgatatttggggtatgctct |
291 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6632378 |
atcctcgatcggtcattatatcaaaggttttcattgtcacattagaacttttctgttgtggatgttgatatttggggtatgctct |
6632462 |
T |
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