View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4193_low_48 (Length: 263)
Name: NF4193_low_48
Description: NF4193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4193_low_48 |
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Alignment Details
Target: chr4 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 19 - 254
Target Start/End: Complemental strand, 46909631 - 46909396
Alignment:
| Q |
19 |
attctatatgaaagtgttgcagatttaaggattgattttatttgttacctagtcatgtttagtttttacttatctgttgttactctaatgagagttaagt |
118 |
Q |
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| T |
46909631 |
attctatatgaaagtgttgcagatttaaggattgattttatttgttacctagtcatgtttagtttttacttatctgttgttactctaatgagagttaagt |
46909532 |
T |
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| Q |
119 |
tagttgtttagcctatcagttagtattattttacttctgtgtttttctgttaggtagttagggtcgttatccacctcttcactcttgtatatgtatattc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
46909531 |
tagttgtttagcctatcagttagtattattttacttctgtgtttttctgttaggtagttagggtggttatccacctcttcactcttgtatatgtatattc |
46909432 |
T |
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| Q |
219 |
acttttccattcattcaatgaagtaataagaattat |
254 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
46909431 |
acttttccattcattcaatgaagtaataagaattat |
46909396 |
T |
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