View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4195_high_2 (Length: 590)
Name: NF4195_high_2
Description: NF4195
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4195_high_2 |
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Alignment Details
Target: chr2 (Bit Score: 531; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 531; E-Value: 0
Query Start/End: Original strand, 36 - 574
Target Start/End: Original strand, 38918531 - 38919069
Alignment:
| Q |
36 |
tacatgaaactcaaaaaagtttctcatcaaagaagaactcccatgcaaatcaaaccaagcccagcaacaaatccaaaaccgacattccttccagctgcac |
135 |
Q |
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| T |
38918531 |
tacatgaaactcaaaaaagtttctcatcaaagaagaactcccatgcaaatcaaaccaagcccagcaacaaatccaaaaccgacattccttccagctgcac |
38918630 |
T |
|
| Q |
136 |
tatcatccttcttactagacgcaggagatggagcatcaccttcaacgtcgctgctgctcggagttttagaaggagttttcgacgacttaggagctggaga |
235 |
Q |
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| T |
38918631 |
tatcatccttcttactagacgcaggagatggagcatcaccttcaacgtcgctgctgctcggagttttggaaggagttttcgacgacttaggagctggaga |
38918730 |
T |
|
| Q |
236 |
tgaagatggagacttagcaccaaaaagttcagaaggtaacaaaaccttgtccaattgataaacagccaaaggaaattgttgtctcaaagcattgttgata |
335 |
Q |
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| T |
38918731 |
tgaagatggagacttagcaccaaaaagttcagaaggtaacaaaaccttgtccaattgataaacagccaaaggaaattgttgtctcaatgcattgttgata |
38918830 |
T |
|
| Q |
336 |
ggtacagtaacaactccagttgaaacattgacttggttaccttgtgaagtgaagtgaagaccccagttaccttctttaccagaagcttgtgttctaactg |
435 |
Q |
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| T |
38918831 |
ggtacagtaacaactccagttgaaacattgacttggttaccttgtgaagtgaagtgaagaccccagttaccttctttaccagaagcttgtgttctaactg |
38918930 |
T |
|
| Q |
436 |
ggttagaaactgttaagaaatcggaaagagagtagtattttggtgtaacatggtagagaatgagttgaactttctgttggtcggagaggtcgttgattgc |
535 |
Q |
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| T |
38918931 |
ggttagaaactgttaagaaatcggaaagagagtagtattttggtgtaacatggtagagaatgagttgaactttctgttggtcggagaggtcgttgattgc |
38919030 |
T |
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| Q |
536 |
tcctgatattagacataaatgttagttatactaattagt |
574 |
Q |
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| T |
38919031 |
tcctgatattagacataaatgttagttatactaattagt |
38919069 |
T |
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