View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4197_low_32 (Length: 214)
Name: NF4197_low_32
Description: NF4197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4197_low_32 |
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Alignment Details
Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 9 - 197
Target Start/End: Complemental strand, 27145768 - 27145580
Alignment:
| Q |
9 |
atcatcacaaagtagtgcaggtaggaaactttgggataaaacaatgcacaccatcatattttcatcttgatcaaccaaaaatttgagctgaaatatttta |
108 |
Q |
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| T |
27145768 |
atcatcacaaagtagtgcaggtaggaaactttgggataaaacaatgcacaccatcatattttcatcttgatcaaccaaaaatttgagctgaaatatttta |
27145669 |
T |
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| Q |
109 |
tatattattattggatatgtatttagtggataagattgatttgatgatgagtttcggtcagttgcatctgtttgtagaagtcgatatca |
197 |
Q |
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| T |
27145668 |
tatattattattggatatgtatttagtggataagattgatttgatgatgagtttcggtcagttgcatctgtttgtaggagtcgatatca |
27145580 |
T |
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