View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4198_high_2 (Length: 375)
Name: NF4198_high_2
Description: NF4198
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4198_high_2 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 279; Significance: 1e-156; HSPs: 16)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 22 - 367
Target Start/End: Complemental strand, 3953197 - 3952854
Alignment:
| Q |
22 |
tcgtacatctgtaggatctacctcgtagaaaacaggtattacaatttgtccatatttctctttgcactcaattattttcacaagttcttctaaacaccaa |
121 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3953197 |
tcgtacatctgtaggacctacctcgtagaaaacaggtattacaatctgtccatttttctctctgcactcaattattttcacaagttcttctaaacaccaa |
3953098 |
T |
|
| Q |
122 |
cgtgaagaagcatagttttttgagaatatgatcaatgaaatgaacgatccttcaattgcttcaaaaagtgaatgtgatatgtcatctcccctcttaagtt |
221 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
3953097 |
cgtgaagaagcatagttttctgagaatatgatcaatgaaatgaacgatccttcaattgcttcaaaaattgaa--tgatatgtcatctcccctcttaagtt |
3953000 |
T |
|
| Q |
222 |
tgtcatcaacaaaggcatttattttctttcgagaaaaagccttagccaaatggccaagaaagccgtggcggatgtcctcacccctaaagcttacaaaaac |
321 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
3952999 |
tgtcatcaacaaaggcatttatttgcttttgaggaaaagccttagccaaatgaccaagaaagccgtggcggatgtcctctcccctaaagcttacaaaaac |
3952900 |
T |
|
| Q |
322 |
atcatactttgattcgggagcattgtttgacattgccttctctgct |
367 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| ||| |||||| |
|
|
| T |
3952899 |
atcatactttgattcgggagaattgtttgacattgtcttttctgct |
3952854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 22 - 367
Target Start/End: Original strand, 4026444 - 4026789
Alignment:
| Q |
22 |
tcgtacatctgtaggatctacctcgtagaaaacaggtattacaatttgtccatatttctctttgcactcaattattttcacaagttcttctaaacaccaa |
121 |
Q |
| |
|
|||||| | ||||||||||||| | |||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |
|
|
| T |
4026444 |
tcgtacgtttgtaggatctaccccatagaaaacaggtattacaatctgtccatatttctctttgcaatcaattattttcaaaagttcttctaaacaccaa |
4026543 |
T |
|
| Q |
122 |
cgtgaagaagcatagttttttgagaatatgatcaatgaaatgaacgatccttcaattgcttcaaaaagtgaatgtgatatgtcatctcccctcttaagtt |
221 |
Q |
| |
|
| ||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||| | |||||||| ||||||||||||||||||||||||| |
|
|
| T |
4026544 |
cttgaagaagcatagttttctgagaatatgatcaatgaaatgaatgatccttctattgcttctacaagtgaattcgatatgtcatctcccctcttaagtt |
4026643 |
T |
|
| Q |
222 |
tgtcatcaacaaaggcatttattttctttcgagaaaaagccttagccaaatggccaagaaagccgtggcggatgtcctcacccctaaagcttacaaaaac |
321 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
4026644 |
tgtcatcaacaaaggcatttatttgctttcgagaaaaagccttagccaaatggccaagaaagccgtggcggatgtcctcacccctaaagtttacgaaaac |
4026743 |
T |
|
| Q |
322 |
atcatactttgattcgggagcattgtttgacattgccttctctgct |
367 |
Q |
| |
|
||||||||||| || ||||||||||| ||||||||||| |||||| |
|
|
| T |
4026744 |
atcatactttggttgaggagcattgttagacattgccttttctgct |
4026789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 22 - 367
Target Start/End: Original strand, 4011687 - 4012032
Alignment:
| Q |
22 |
tcgtacatctgtaggatctacctcgtagaaaacaggtattacaatttgtccatatttctctttgcactcaattattttcacaagttcttctaaacaccaa |
121 |
Q |
| |
|
|||||||| ||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4011687 |
tcgtacatttgtaggatctaccccatagaaaacaggtattacaatctgtccatatttctctttgcactcaattattttcgcaagttcttctaaacaccaa |
4011786 |
T |
|
| Q |
122 |
cgtgaagaagcatagttttttgagaatatgatcaatgaaatgaacgatccttcaattgcttcaaaaagtgaatgtgatatgtcatctcccctcttaagtt |
221 |
Q |
| |
|
||||| |||||||||||| ||||||||||| |||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |
|
|
| T |
4011787 |
tgtgaacaagcatagttttatgagaatatgaccaatgaaatgggagatccttcaattgcttcaacaagtgaatgtgacatgtcatctcccctcttaagtt |
4011886 |
T |
|
| Q |
222 |
tgtcatcaacaaaggcatttattttctttcgagaaaaagccttagccaaatggccaagaaagccgtggcggatgtcctcacccctaaagcttacaaaaac |
321 |
Q |
| |
|
| |||||||||||||||||||||| |||||||| |||||| || |||||||||||| ||| |||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
4011887 |
tctcatcaacaaaggcatttatttgctttcgaggaaaagcgataaccaaatggccaaaaaatccgtggcggatgtcttcacctctaaagcttacaaaaac |
4011986 |
T |
|
| Q |
322 |
atcatactttgattcgggagcattgtttgacattgccttctctgct |
367 |
Q |
| |
|
||||| |||||||| ||||| | |||||||| |||||| |||||| |
|
|
| T |
4011987 |
atcatcctttgattggggagaaatgtttgacggtgccttttctgct |
4012032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 25 - 367
Target Start/End: Original strand, 4003211 - 4003553
Alignment:
| Q |
25 |
tacatctgtaggatctacctcgtagaaaacaggtattacaatttgtccatatttctctttgcactcaattattttcacaagttcttctaaacaccaacgt |
124 |
Q |
| |
|
||||| ||||||||||||| | ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
4003211 |
tacatttgtaggatctaccccatagaaaacaggtaaaacaatccgtccatatttctctttgcactcaattattttcacaagttcttctaaacaccaatgt |
4003310 |
T |
|
| Q |
125 |
gaagaagcatagttttttgagaatatgatcaatgaaatgaacgatccttcaattgcttcaaaaagtgaatgtgatatgtcatctcccctcttaagtttgt |
224 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||| | ||||| ||||||||| |||||||||||||||||||| | |
|
|
| T |
4003311 |
gaagaagcatagttttctgagaatatgaccaatgaaatgaatgatccttcaattgcttctacaagtgcatgtgatatatcatctcccctcttaagttttt |
4003410 |
T |
|
| Q |
225 |
catcaacaaaggcatttattttctttcgagaaaaagccttagccaaatggccaagaaagccgtggcggatgtcctcacccctaaagcttacaaaaacatc |
324 |
Q |
| |
|
| ||||||||||||||||||| || |||| |||||| ||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4003411 |
cgtcaacaaaggcatttatttgtttacgaggaaaagctttaatcaaatggccaagaaatccgtgacggatgtcctcgcccctaaagcttacaaaaacatc |
4003510 |
T |
|
| Q |
325 |
atactttgattcgggagcattgtttgacattgccttctctgct |
367 |
Q |
| |
|
||||||| ||| |||||||| ||||||||||||||| |||||| |
|
|
| T |
4003511 |
atactttaattggggagcatcgtttgacattgccttttctgct |
4003553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 22 - 355
Target Start/End: Original strand, 3811899 - 3812232
Alignment:
| Q |
22 |
tcgtacatctgtaggatctacctcgtagaaaacaggtattacaatttgtccatatttctctttgcactcaattattttcacaagttcttctaaacaccaa |
121 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||| || |||||||||||| |
|
|
| T |
3811899 |
tcgtacatctgtaggatctactccgtagaaaataggtattacaaaatgtccatatgtctctttgcactcaattattttcacaagctcatctaaacaccaa |
3811998 |
T |
|
| Q |
122 |
cgtgaagaagcatagttttttgagaatatgatcaatgaaatgaacgatccttcaattgcttcaaaaagtgaatgtgatatgtcatctcccctcttaagtt |
221 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||||||||| |||||||| |||||||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
3811999 |
tgtgaagaagcatagttttctgagaatatgaccaatgaaatgggagatccttccattgcttctacaagtgaatgtgatatgtcatctcccctcttaagtt |
3812098 |
T |
|
| Q |
222 |
tgtcatcaacaaaggcatttattttctttcgagaaaaagccttagccaaatggccaagaaagccgtggcggatgtcctcacccctaaagcttacaaaaac |
321 |
Q |
| |
|
| ||||||| |||||||||||||| ||||||||||||||||| ||||||||||| ||||||| | |||||||||||| |||||||||||||||||||| |
|
|
| T |
3812099 |
tctcatcaagaaaggcatttatttgctttcgagaaaaagcctcagccaaatggctaagaaagaacttgcggatgtcctcgcccctaaagcttacaaaaac |
3812198 |
T |
|
| Q |
322 |
atcatactttgattcgggagcattgtttgacatt |
355 |
Q |
| |
|
|||||||||||||| |||| |||||||| |||| |
|
|
| T |
3812199 |
atcatactttgattgaggagtattgtttggcatt |
3812232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 45 - 355
Target Start/End: Original strand, 3821495 - 3821805
Alignment:
| Q |
45 |
cgtagaaaacaggtattacaatttgtccatatttctctttgcactcaattattttcacaagttcttctaaacaccaacgtgaagaagcatagttttttga |
144 |
Q |
| |
|
||||||||| ||||| |||||| ||||||||||||||||||||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| |
|
|
| T |
3821495 |
cgtagaaaataggtaatacaatctgtccatatttctctttgcactcgattattttcacaagctcatctaaacaccaatgtgaagaagcatagttttttga |
3821594 |
T |
|
| Q |
145 |
gaatatgatcaatgaaatgaacgatccttcaattgcttcaaaaagtgaatgtgatatgtcatctcccctcttaagtttgtcatcaacaaaggcatttatt |
244 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
3821595 |
gaatatgaccaatgaaatgggagatccttcaattgcttcaaaaagtgaatgtgatatgtcatctcccctcgtaagtgcgtcatcaacaaaggcatttatt |
3821694 |
T |
|
| Q |
245 |
ttctttcgagaaaaagccttagccaaatggccaagaaagccgtggcggatgtcctcacccctaaagcttacaaaaacatcatactttgattcgggagcat |
344 |
Q |
| |
|
| |||||||| |||||||||| ||||||||| |||||||| ||||||||| ||||| |||||||||||||||||||||||||||||| ||| |||| || |
|
|
| T |
3821695 |
tgctttcgaggaaaagccttaaccaaatggctaagaaagctgtggcggatatcctcgcccctaaagcttacaaaaacatcatactttaattgaggagtat |
3821794 |
T |
|
| Q |
345 |
tgtttgacatt |
355 |
Q |
| |
|
|||||| |||| |
|
|
| T |
3821795 |
tgtttggcatt |
3821805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 22 - 333
Target Start/End: Complemental strand, 3916155 - 3915844
Alignment:
| Q |
22 |
tcgtacatctgtaggatctacctcgtagaaaacaggtattacaatttgtccatatttctctttgcactcaattattttcacaagttcttctaaacaccaa |
121 |
Q |
| |
|
||||| |||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
3916155 |
tcgtatatctgtaggatctaccctgaagaaaacaggtattacaatttgtgcatatttctctttacactcaactattttcacaagttcttttaaacaccaa |
3916056 |
T |
|
| Q |
122 |
cgtgaagaagcatagttttttgagaatatgatcaatgaaatgaacgatccttcaattgcttcaaaaagtgaatgtgatatgtcatctcccctcttaagtt |
221 |
Q |
| |
|
||||| |||||||||||| |||||||||||||||||||||||| |||||||| ||||||||| |||||||| |||||||||||||||||||||||||| |
|
|
| T |
3916055 |
tgtgaacaagcatagttttctgagaatatgatcaatgaaatgaatgatccttcgattgcttcaccaagtgaatctgatatgtcatctcccctcttaagtt |
3915956 |
T |
|
| Q |
222 |
tgtcatcaacaaaggcatttattttctttcgagaaaaagccttagccaaatggccaagaaagccgtggcggatgtcctcacccctaaagcttacaaaaac |
321 |
Q |
| |
|
||||||||||||| |||||||||| |||| || ||||||||||| ||||||||| |||||||||| ||||| |||| || ||||||||||||||||| |
|
|
| T |
3915955 |
tgtcatcaacaaaagcatttatttgcttttgacaaaaagccttaaccaaatggctaagaaagccgctacggatttccttgccactaaagcttacaaaaac |
3915856 |
T |
|
| Q |
322 |
atcatactttga |
333 |
Q |
| |
|
|||||||||||| |
|
|
| T |
3915855 |
atcatactttga |
3915844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 21 - 367
Target Start/End: Original strand, 4220709 - 4221055
Alignment:
| Q |
21 |
atcgtacatctgtaggatctacctcgtagaaaacaggtattacaatttgtccatatttctctttgcactcaattattttcacaagttcttctaaacacca |
120 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4220709 |
atcgtacatttgtaggatctacctcgtagaaaataggtattacaagttgtccatatttctctctgcactcaattatttttacaagttcttctaaacacca |
4220808 |
T |
|
| Q |
121 |
acgtgaagaagcatagttttttgagaatatgatcaatgaaatgaacgatccttcaattgcttcaaaaagtgaatgtgatatgtcatctcccctcttaagt |
220 |
Q |
| |
|
| |||||||||||||||||| |||||||||| |||||||||| | |||||||||||||||||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
4220809 |
atgtgaagaagcatagttttcagagaatatgaccaatgaaatggatgatccttcaattgcttcaccaagtgaatgtgatatgtcatctcctttcttaagt |
4220908 |
T |
|
| Q |
221 |
ttgtcatcaacaaaggcatttattttctttcgagaaaaagccttagccaaatggccaagaaagccgtggcggatgtcctcacccctaaagcttacaaaaa |
320 |
Q |
| |
|
|||| |||||||||| |||||||| |||||| |||||||| | ||| | |||||||||||||| ||||| || | ||||||||||||||||||| |
|
|
| T |
4220909 |
ttgtaatcaacaaagatatttatttgttttcgaataaaagcctcatacaatttgccaagaaagccgtcgcggacatcatttcccctaaagcttacaaaaa |
4221008 |
T |
|
| Q |
321 |
catcatactttgattcgggagcattgtttgacattgccttctctgct |
367 |
Q |
| |
|
||||| ||||||||| |||| ||||||||||||||| || |||||| |
|
|
| T |
4221009 |
catcaaactttgatttaggagtattgtttgacattgctttttctgct |
4221055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 22 - 333
Target Start/End: Complemental strand, 3927149 - 3926838
Alignment:
| Q |
22 |
tcgtacatctgtaggatctacctcgtagaaaacaggtattacaatttgtccatatttctctttgcactcaattattttcacaagttcttctaaacaccaa |
121 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||| |
|
|
| T |
3927149 |
tcgtacatctgtaggatctacccggtagaaaacgggtattacaatttgtgcatatttctctttacactcaactattttcacaagttcttctaaacaccaa |
3927050 |
T |
|
| Q |
122 |
cgtgaagaagcatagttttttgagaatatgatcaatgaaatgaacgatccttcaattgcttcaaaaagtgaatgtgatatgtcatctcccctcttaagtt |
221 |
Q |
| |
|
||||| ||||||| |||| ||| ||||||||||| ||||| | ||||||| |||||||||| |||||||| |||||||||||||||||| | ||||| |
|
|
| T |
3927049 |
tgtgaacaagcatatttttctgaaaatatgatcaacaaaatggatgatcctttgattgcttcaacaagtgaatctgatatgtcatctcccctgtgaagtt |
3926950 |
T |
|
| Q |
222 |
tgtcatcaacaaaggcatttattttctttcgagaaaaagccttagccaaatggccaagaaagccgtggcggatgtcctcacccctaaagcttacaaaaac |
321 |
Q |
| |
|
||||||||||||| |||||||||| |||| || |||||||||| ||||||||| |||||||| | || ||||||| || ||||||||||||||||| |
|
|
| T |
3926949 |
tgtcatcaacaaaagcatttatttgcttttgaagaaaagccttaaccaaatggctaagaaagctgctacgaatgtccttgccactaaagcttacaaaaac |
3926850 |
T |
|
| Q |
322 |
atcatactttga |
333 |
Q |
| |
|
|||||||||||| |
|
|
| T |
3926849 |
atcatactttga |
3926838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 47 - 356
Target Start/End: Original strand, 3988122 - 3988431
Alignment:
| Q |
47 |
tagaaaacaggtattacaatttgtccatatttctctttgcactcaattattttcacaagttcttctaaacaccaacgtgaagaagcatagttttttgaga |
146 |
Q |
| |
|
|||||||||||||||| ||| |||||| | || ||||||||| ||||||||||||||||| |||||||||||| ||||||||| ||| |||||||||| |
|
|
| T |
3988122 |
tagaaaacaggtattataatctgtccacgatcctttttgcactcgattattttcacaagttcatctaaacaccaatgtgaagaagaataattttttgaga |
3988221 |
T |
|
| Q |
147 |
atatgatcaatgaaatgaacgatccttcaattgcttcaaaaagtgaatgtgatatgtcatctcccctcttaagtttgtcatcaacaaaggcatttatttt |
246 |
Q |
| |
|
|||||| ||||||||| ||||| |||||||||||||||| |||||||||| || |||||||||||||||| | ||| || |||||| |||||||||| |
|
|
| T |
3988222 |
atatgaccaatgaaattaacgagccttcaattgcttcaacaagtgaatgtttgatttcatctcccctcttaattatgttgtctacaaagacatttatttt |
3988321 |
T |
|
| Q |
247 |
ctttcgagaaaaagccttagccaaatggccaagaaagccgtggcggatgtcctcacccctaaagcttacaaaaacatcatactttgattcgggagcattg |
346 |
Q |
| |
|
|||| || |||||||||| ||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||| ||||||| |||||| ||| |
|
|
| T |
3988322 |
cttttgacgaaaagccttaaccaaatggccaagaaagccgtctcggatgtccttgcccctaaagctcacaaaaacatcatattttgattggggagcgttg |
3988421 |
T |
|
| Q |
347 |
tttgacattg |
356 |
Q |
| |
|
||||||||| |
|
|
| T |
3988422 |
gttgacattg |
3988431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 25 - 253
Target Start/End: Complemental strand, 3962588 - 3962360
Alignment:
| Q |
25 |
tacatctgtaggatctacctcgtagaaaacaggtattacaatttgtccatatttctctttgcactcaattattttcacaagttcttctaaacaccaacgt |
124 |
Q |
| |
|
|||||||||||||||||||| || |||| |||||| || || ||||||||||||||| |||| | || | || | |||||||||||||||||||||| | |
|
|
| T |
3962588 |
tacatctgtaggatctacctgataaaaaataggtataacgatctgtccatatttctctctgcattgaagtgttgtaacaagttcttctaaacaccaacat |
3962489 |
T |
|
| Q |
125 |
gaagaagcatagttttttgagaatatgatcaatgaaatgaacgatccttcaattgcttcaaaaagtgaatgtgatatgtcatctcccctcttaagtttgt |
224 |
Q |
| |
|
||||||||||||| | ||| ||||||||||| ||||| |||||||||||||||||| | |||||| |||| ||| |||||||||||||||||||| | |
|
|
| T |
3962488 |
gaagaagcatagtcgtgtgaaaatatgatcaaggaaattaacgatccttcaattgctctgacaagtgattgtggtatttcatctcccctcttaagtttat |
3962389 |
T |
|
| Q |
225 |
catcaacaaaggcatttattttctttcga |
253 |
Q |
| |
|
|||| |||||||| ||||||||||||||| |
|
|
| T |
3962388 |
catctacaaaggcttttattttctttcga |
3962360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 25 - 282
Target Start/End: Original strand, 4019487 - 4019744
Alignment:
| Q |
25 |
tacatctgtaggatctacctcgtagaaaacaggtattacaatttgtccatatttctctttgcactcaattattttcacaagttcttctaaacaccaacgt |
124 |
Q |
| |
|
|||||||| |||||||| | | || |||| ||||| ||||||||||||||||||||| |||| | || |||| | ||||||||||| |||||||| ||| |
|
|
| T |
4019487 |
tacatctgcaggatctatcccataaaaaataggtacaacaatttgtccatatttctctctgcattgaagtattgtgacaagttcttccaaacaccagcgt |
4019586 |
T |
|
| Q |
125 |
gaagaagcatagttttttgagaatatgatcaatgaaatgaacgatccttcaattgcttcaaaaagtgaatgtgatatgtcatctcccctcttaagtttgt |
224 |
Q |
| |
|
||||||||||||| || ||||||||||||||| ||||| || |||||||||||| || | |||||| ||| ||| ||||||||||||||||| | | |
|
|
| T |
4019587 |
gaagaagcatagtcttgtgagaatatgatcaaggaaattaatgatccttcaattcctctgacaagtgattgtagtatttcatctcccctcttaagctcat |
4019686 |
T |
|
| Q |
225 |
catcaacaaaggcatttattttctttcgagaaaaagccttagccaaatggccaagaaa |
282 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||||| | |||||||| |||||| |
|
|
| T |
4019687 |
catcaacaaaggcttttattttctttcgacgtaaagcctcaatcaaatggctaagaaa |
4019744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 50 - 250
Target Start/End: Original strand, 3825755 - 3825955
Alignment:
| Q |
50 |
aaaacaggtattacaatttgtccatatttctctttgcactcaattattttcacaagttcttctaaacaccaacgtgaagaagcatagttttttgagaata |
149 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |||| | | |||| | ||| |||||||||||||||||| |||||||||||||| || |||||||| |
|
|
| T |
3825755 |
aaaacaggtataacaatttgtccatatttctctctgcattgacgtattgtgacatgttcttctaaacaccaacatgaagaagcatagtcttgtgagaata |
3825854 |
T |
|
| Q |
150 |
tgatcaatgaaatgaacgatccttcaattgcttcaaaaagtgaatgtgatatgtcatctcccctcttaagtttgtcatcaacaaaggcatttattttctt |
249 |
Q |
| |
|
||||||| ||||| || ||||||||| || || | |||||| |||| ||| ||||||||||||||||||| |||||||||||||| ||||||| ||| |
|
|
| T |
3825855 |
tgatcaaggaaattaatgatccttcatttcctcttacaagtgattgtggtatttcatctcccctcttaagttcatcatcaacaaaggcttttatttcctt |
3825954 |
T |
|
| Q |
250 |
t |
250 |
Q |
| |
|
| |
|
|
| T |
3825955 |
t |
3825955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 124 - 252
Target Start/End: Original strand, 3792676 - 3792804
Alignment:
| Q |
124 |
tgaagaagcatagttttttgagaatatgatcaatgaaatgaacgatccttcaattgcttcaaaaagtgaatgtgatatgtcatctcccctcttaagtttg |
223 |
Q |
| |
|
|||||||||||||| || ||||||||||||||| ||||| || ||||||||| || || | |||||| |||| ||| ||||||||||||||||||| |
|
|
| T |
3792676 |
tgaagaagcatagtcttgtgagaatatgatcaaggaaattaatgatccttcatttcctcttacaagtgattgtggtatttcatctcccctcttaagttca |
3792775 |
T |
|
| Q |
224 |
tcatcaacaaaggcatttattttctttcg |
252 |
Q |
| |
|
|||||||||||||| ||||||| |||||| |
|
|
| T |
3792776 |
tcatcaacaaaggcttttatttcctttcg |
3792804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 136
Target Start/End: Original strand, 3805763 - 3805874
Alignment:
| Q |
25 |
tacatctgtaggatctacctcgtagaaaacaggtattacaatttgtccatatttctctttgcactcaattattttcacaagttcttctaaacaccaacgt |
124 |
Q |
| |
|
|||||||| |||||||| | | || |||| |||||| ||||| ||||||||||||| | |||| | || |||| | |||||||| || |||||||||| | |
|
|
| T |
3805763 |
tacatctgcaggatctatcccataaaaaataggtataacaatctgtccatatttctttctgcattgaagtattgtgacaagttcgtccaaacaccaacat |
3805862 |
T |
|
| Q |
125 |
gaagaagcatag |
136 |
Q |
| |
|
|||||||||||| |
|
|
| T |
3805863 |
gaagaagcatag |
3805874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 4318304 - 4318238
Alignment:
| Q |
162 |
tgaacgatccttcaattgcttcaaaaagtgaatgtgatatgtcatctcccctcttaagtttgtcatc |
228 |
Q |
| |
|
|||| ||||||| ||||||||||| || |||||||||||| ||||| ||||||||||| |||||||| |
|
|
| T |
4318304 |
tgaatgatcctttaattgcttcaacaaatgaatgtgatatttcatcccccctcttaagcttgtcatc |
4318238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 22 - 345
Target Start/End: Original strand, 13399049 - 13399372
Alignment:
| Q |
22 |
tcgtacatctgtaggatctacctcgtagaaaacaggtattacaatttgtccatatttctctttgcactcaattattttcacaagttcttctaaacaccaa |
121 |
Q |
| |
|
||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13399049 |
tcgtacatcggtgggatctactccgtagaaaacaggtattacaatttgtccatatttctctttgcactcaattattttcacaagttcttctaaacaccaa |
13399148 |
T |
|
| Q |
122 |
cgtgaagaagcatagttttttgagaatatgatcaatgaaatgaacgatccttcaattgcttcaaaaagtgaatgtgatatgtcatctcccctcttaagtt |
221 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
13399149 |
cgtgaagaagcatagttttctgagaatatgatcaatgaaataaatgatccttcgattgcttcaaaaagtgaatgtgatatgtcatttcccctcttaagtt |
13399248 |
T |
|
| Q |
222 |
tgtcatcaacaaaggcatttattttctttcgagaaaaagccttagccaaatggccaagaaagccgtggcggatgtcctcacccctaaagcttacaaaaac |
321 |
Q |
| |
|
|||| ||||||||| ||||||||| |||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
13399249 |
tgtcgtcaacaaagacatttatttgcttttgagaaaaagccttaaacaaatggccaagaaagccgtggtggatgtcctcacccctaaagcttacaaaaac |
13399348 |
T |
|
| Q |
322 |
atcatactttgattcgggagcatt |
345 |
Q |
| |
|
||| || |||||| ||||||||| |
|
|
| T |
13399349 |
atcgtatattgattggggagcatt |
13399372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 113 - 206
Target Start/End: Original strand, 7069945 - 7070038
Alignment:
| Q |
113 |
aaacaccaacgtgaagaagcatagttttttgagaatatgatcaatgaaatgaacgatccttcaattgcttcaaaaagtgaatgtgatatgtcat |
206 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||||||| |||||||| | ||| ||||||||||||||||||||| |||||||| |||| |
|
|
| T |
7069945 |
aaacaccaagatgaagaagcatagttttgagagaatatgactaatgaaattgaagatgtttcaattgcttcaaaaagtgactgtgatatttcat |
7070038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 50 - 207
Target Start/End: Original strand, 7086948 - 7087105
Alignment:
| Q |
50 |
aaaacaggtattacaatttgtccatatttctctttgcactcaattattttcacaagttcttctaaacaccaacgtgaagaagcatagttttttgagaata |
149 |
Q |
| |
|
|||||||| | || ||| ||||||| ||||||| | ||||||| ||||| ||||| || || |||||||| ||||||||||||||||| ||||||| |
|
|
| T |
7086948 |
aaaacaggcaataaaatctgtccatctttctctctacactcaacaattttgacaagctcatccaaacaccattttgaagaagcatagttttgagagaata |
7087047 |
T |
|
| Q |
150 |
tgatcaatgaaatgaacgatccttcaattgcttcaaaaagtgaatgtgatatgtcatc |
207 |
Q |
| |
|
||| |||||||| | ||| |||||| |||||||||||||| |||| ||| ||||| |
|
|
| T |
7087048 |
tgactaatgaaattgaagatgtttcaatagcttcaaaaagtgattgtgctatttcatc |
7087105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 181
Target Start/End: Complemental strand, 7035490 - 7035393
Alignment:
| Q |
84 |
tgcactcaattattttcacaagttcttctaaacaccaacgtgaagaagcatagttttttgagaatatgatcaatgaaatgaacgatccttcaattgct |
181 |
Q |
| |
|
||||||| | |||||||||||| || || ||||||||| ||||||| ||| ||||| ||| ||||||| ||||||||| || ||| |||||||||| |
|
|
| T |
7035490 |
tgcactcgactattttcacaagctcatccaaacaccaatgtgaagatgcaaagtttggtgaaaatatgaccaatgaaatcaatgatttttcaattgct |
7035393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 207
Target Start/End: Original strand, 7100541 - 7100717
Alignment:
| Q |
31 |
tgtaggatctacctcgtagaaaacaggtattacaatttgtccatatttctctttgcactcaattattttcacaagttcttctaaacaccaacgtgaagaa |
130 |
Q |
| |
|
||||||||| || | |||||||||||| | || ||| ||||||| |||||| | ||||||| ||||| || | || || |||||||| |||||| |
|
|
| T |
7100541 |
tgtaggatcaactttgtagaaaacaggcaataaaatatgtccatctttctccctacactcaacaattttgactaactcatccaaacaccacgacgaagaa |
7100640 |
T |
|
| Q |
131 |
gcatagttttttgagaatatgatcaatgaaatgaacgatccttcaattgcttcaaaaagtgaatgtgatatgtcatc |
207 |
Q |
| |
|
|||||||||| |||||||||| ||| ||||| |||||| |||||| | ||||| |||||| |||| ||| ||||| |
|
|
| T |
7100641 |
gcatagttttgagagaatatgaccaaagaaatcaacgatgtttcaatagtttcaagaagtgattgtgctatttcatc |
7100717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 181
Target Start/End: Original strand, 7078427 - 7078537
Alignment:
| Q |
71 |
ccatatttctctttgcactcaattattttcacaagttcttctaaacaccaacgtgaagaagcatagttttttgagaatatgatcaatgaaatgaacgatc |
170 |
Q |
| |
|
|||||||| ||| | ||||||| |||||||||||| || || | ||||||| |||||| ||| ||||| |||||||| | |||||||||||| ||| |
|
|
| T |
7078427 |
ccatatttttctctacactcaactattttcacaagctcctccatacaccaatatgaagatgcaaagtttggagagaatataaccaatgaaatgaatgatt |
7078526 |
T |
|
| Q |
171 |
cttcaattgct |
181 |
Q |
| |
|
|||||||||| |
|
|
| T |
7078527 |
tttcaattgct |
7078537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 181
Target Start/End: Complemental strand, 7028788 - 7028691
Alignment:
| Q |
84 |
tgcactcaattattttcacaagttcttctaaacaccaacgtgaagaagcatagttttttgagaatatgatcaatgaaatgaacgatccttcaattgct |
181 |
Q |
| |
|
||||||| | |||||||||||| || || ||||||||| ||||||| ||| ||||| || ||||||| ||||||||| || ||| |||||||||| |
|
|
| T |
7028788 |
tgcactcgactattttcacaagctcgtccaaacaccaatgtgaagatgcaaagtttggagaaaatatgaccaatgaaatcaatgatttttcaattgct |
7028691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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