View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4200_high_6 (Length: 337)

Name: NF4200_high_6
Description: NF4200
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4200_high_6
NF4200_high_6
[»] chr6 (20 HSPs)
chr6 (71-189)||(17445578-17445697)
chr6 (192-315)||(17445760-17445885)
chr6 (188-314)||(16462748-16462876)
chr6 (188-308)||(24718840-24718962)
chr6 (85-174)||(16462584-16462674)
chr6 (45-189)||(32335931-32336075)
chr6 (121-189)||(18172004-18172072)
chr6 (236-308)||(24728694-24728766)
chr6 (236-314)||(7811936-7812014)
chr6 (188-312)||(18172131-18172257)
chr6 (236-314)||(25592542-25592621)
chr6 (121-186)||(23006027-23006092)
chr6 (121-186)||(23782274-23782339)
chr6 (121-175)||(14325347-14325401)
chr6 (121-175)||(14418357-14418411)
chr6 (245-314)||(17867496-17867565)
chr6 (245-314)||(17877279-17877348)
chr6 (1-37)||(17445460-17445496)
chr6 (121-173)||(19875960-19876011)
chr6 (278-314)||(32335752-32335788)
[»] chr7 (7 HSPs)
chr7 (190-314)||(13172464-13172590)
chr7 (65-143)||(7487832-7487911)
chr7 (88-164)||(13172301-13172378)
chr7 (243-314)||(5035303-5035374)
chr7 (259-314)||(14304381-14304436)
chr7 (121-189)||(9064158-9064226)
chr7 (278-314)||(18056456-18056492)
[»] chr8 (3 HSPs)
chr8 (191-314)||(17916934-17917059)
chr8 (236-314)||(18557936-18558014)
chr8 (104-189)||(18558123-18558209)
[»] chr5 (7 HSPs)
chr5 (88-175)||(23589833-23589921)
chr5 (236-312)||(2156414-2156490)
chr5 (188-307)||(23589639-23589760)
chr5 (121-189)||(26119792-26119860)
chr5 (102-175)||(20567923-20567996)
chr5 (191-314)||(26119922-26120047)
chr5 (56-105)||(34638641-34638689)
[»] chr2 (9 HSPs)
chr2 (236-312)||(20568055-20568131)
chr2 (188-314)||(21846065-21846193)
chr2 (113-189)||(21846252-21846329)
chr2 (80-174)||(20568256-20568350)
chr2 (56-107)||(24440594-24440645)
chr2 (113-189)||(24157937-24158014)
chr2 (188-268)||(24440786-24440868)
chr2 (87-174)||(10896323-10896411)
chr2 (248-312)||(10896553-10896617)
[»] chr1 (11 HSPs)
chr1 (71-174)||(23054491-23054595)
chr1 (231-314)||(18130085-18130168)
chr1 (113-189)||(16870073-16870150)
chr1 (236-312)||(18614826-18614903)
chr1 (238-312)||(20909332-20909407)
chr1 (86-191)||(18129887-18129993)
chr1 (243-314)||(20110037-20110108)
chr1 (236-314)||(23054289-23054367)
chr1 (231-264)||(18517236-18517269)
chr1 (87-151)||(20109825-20109889)
chr1 (56-105)||(20909604-20909653)
[»] chr3 (17 HSPs)
chr3 (85-189)||(8728940-8729045)
chr3 (85-189)||(9080827-9080932)
chr3 (60-189)||(19197797-19197927)
chr3 (100-174)||(10851932-10852007)
chr3 (104-174)||(17697733-17697804)
chr3 (236-314)||(10851730-10851808)
chr3 (192-314)||(16882210-16882334)
chr3 (231-269)||(8729142-8729180)
chr3 (231-269)||(9081029-9081067)
chr3 (32-98)||(10851992-10852058)
chr3 (236-314)||(14077509-14077587)
chr3 (121-175)||(16794264-16794318)
chr3 (236-314)||(17697532-17697610)
chr3 (60-100)||(14077301-14077341)
chr3 (139-189)||(22766530-22766580)
chr3 (245-311)||(27374689-27374755)
chr3 (121-182)||(14077332-14077393)
[»] scaffold0364 (2 HSPs)
scaffold0364 (88-189)||(10305-10407)
scaffold0364 (188-314)||(10466-10594)
[»] scaffold0772 (2 HSPs)
scaffold0772 (188-314)||(940-1068)
scaffold0772 (85-175)||(776-867)
[»] scaffold0011 (1 HSPs)
scaffold0011 (235-312)||(59482-59559)
[»] chr4 (8 HSPs)
chr4 (85-189)||(13027882-13027987)
chr4 (188-314)||(19889061-19889189)
chr4 (231-314)||(18773973-18774056)
chr4 (90-172)||(16324425-16324508)
chr4 (243-314)||(20571123-20571194)
chr4 (236-314)||(16324633-16324711)
chr4 (236-312)||(10661280-10661357)
chr4 (236-312)||(10875425-10875502)
[»] scaffold0622 (2 HSPs)
scaffold0622 (70-141)||(3283-3356)
scaffold0622 (32-109)||(2852-2929)
[»] scaffold0490 (1 HSPs)
scaffold0490 (86-185)||(7437-7537)
[»] scaffold0498 (1 HSPs)
scaffold0498 (236-312)||(419-496)
[»] scaffold0311 (2 HSPs)
scaffold0311 (113-189)||(20177-20254)
scaffold0311 (245-314)||(19991-20060)
[»] scaffold0522 (2 HSPs)
scaffold0522 (86-185)||(4164-4264)
scaffold0522 (86-185)||(11447-11547)
[»] scaffold0078 (1 HSPs)
scaffold0078 (198-312)||(31853-31969)
[»] scaffold0009 (1 HSPs)
scaffold0009 (236-312)||(268707-268784)


Alignment Details
Target: chr6 (Bit Score: 92; Significance: 1e-44; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 71 - 189
Target Start/End: Original strand, 17445578 - 17445697
Alignment:
Q  71 cagaagctgacgtgatcagaagttgaagttcatcagaagttaaagactgga-gctgaagttagttaaatgttgttattttgaatgctcatcattgcagaa 169  Q
    ||||||||||||| |||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17445578 cagaagctgacgtcatcagaagttgaggttcatcagaagctaaagactggaagctgaagttagttaaatgttgttattttgaatgctcatcattggagaa 17445677  T
Q  170 ggaatgagagcctagagcaa 189  Q
    ||||||||||||| ||||||    
T  17445678 ggaatgagagcctggagcaa 17445697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 192 - 315
Target Start/End: Original strand, 17445760 - 17445885
Alignment:
Q  192 acataatacaattgtacattcactacctccaccacccaact--tcttgtctacaatagtacaagataacagttgtgactagactgataattctctataca 289  Q
    |||||||||||||||||| ||||||||| ||| || |||||  |||||||||||  |||||||||||||| |||||||||||||||||||||||||||||    
T  17445760 acataatacaattgtacaatcactaccttcactactcaactcttcttgtctacataagtacaagataacaattgtgactagactgataattctctataca 17445859  T
Q  290 aggaatggatttaaaattgttcccta 315  Q
    | ||||| |||| |||||||||||||    
T  17445860 aagaatgaatttgaaattgttcccta 17445885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 314
Target Start/End: Original strand, 16462748 - 16462876
Alignment:
Q  188 aaggacataatacaattgtacattcactacctccaccacccaacttct--tgtctacaatagtacaagataacagttgtgactagactgataattctcta 285  Q
    ||||||||| ||||||||||||  |||||| ||||  || | ||| ||  ||||| ||||||||||||| ||||||||||| ||  ||| || |||||||    
T  16462748 aaggacatagtacaattgtacaaccactacatccaatactccactcctcatgtctgcaatagtacaagacaacagttgtgaatacgctggtatttctcta 16462847  T
Q  286 tacaaggaatggatttaaaattgttccct 314  Q
    |||||||||||||||| ||||||||||||    
T  16462848 tacaaggaatggatttgaaattgttccct 16462876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 308
Target Start/End: Original strand, 24718840 - 24718962
Alignment:
Q  188 aaggacataatacaattgtacattcactacctccaccacccaacttct--tgtctacaatagtacaagataacagttgtgactagactgataattctcta 285  Q
    ||||||||| ||||||||||||  |||||||||||| || | ||| ||  ||||| ||||||||||||| ||||||||||||||  ||| |  |||| ||    
T  24718840 aaggacatagtacaattgtacagccactacctccactactccactcctcatgtctgcaatagtacaagacaacagttgtgactacgctggttgttcttta 24718939  T
Q  286 tacaaggaatggatttaaaattg 308  Q
    |||||||||||||||| ||||||    
T  24718940 tacaaggaatggatttgaaattg 24718962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 85 - 174
Target Start/End: Original strand, 16462584 - 16462674
Alignment:
Q  85 atcagaagttgaagttcatcagaagttaaagactgga-gctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaat 174  Q
    ||||||| |||||| |||||||||||| |||| |||| ||||||||||||||||| |||||||| ||||||  ||||||| ||||||||||    
T  16462584 atcagaatttgaagatcatcagaagttgaagattggaagctgaagttagttaaattttgttattctgaatggacatcattacagaaggaat 16462674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 189
Target Start/End: Complemental strand, 32336075 - 32335931
Alignment:
Q  45 tctgaagatgctcagaagctgtctaccagaagctgacgtgatcagaagttgaagttcatcagaagttaaagact-ggagctgaagttagttaaatgttgt 143  Q
    |||||||||  |||||||||||||| |||||||||| || ||||||   | |||||||| ||||| | |||||| | |||| |||||||||||||||||     
T  32336075 tctgaagatcatcagaagctgtctatcagaagctgaagtcatcagagtctaaagttcataagaagcttaagactagaagctcaagttagttaaatgttga 32335976  T
Q  144 tattttgaatgctcatcattgcagaaggaatgagagcctagagcaa 189  Q
    |||| | |||||| || |||||||||||||||  ||||| ||||||    
T  32335975 tattct-aatgcttatgattgcagaaggaatggaagcctggagcaa 32335931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 18172004 - 18172072
Alignment:
Q  121 agctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaatgagagcctagagcaa 189  Q
    ||||||||||||||||||||||||||| |||||||  || ||||||||||| |||  ||||||||||||    
T  18172004 agctgaagttagttaaatgttgttattctgaatgcatatgattgcagaaggtatggaagcctagagcaa 18172072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 308
Target Start/End: Original strand, 24728694 - 24728766
Alignment:
Q  236 tgtctacaatagtacaagataacagttgtgactagactgataattctctatacaaggaatggatttaaaattg 308  Q
    ||||| ||||||||||||| ||||||||||||||  ||| | ||||| |||||||||||||||||| ||||||    
T  24728694 tgtctgcaatagtacaagacaacagttgtgactacgctggttattctttatacaaggaatggatttgaaattg 24728766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 314
Target Start/End: Complemental strand, 7812014 - 7811936
Alignment:
Q  236 tgtctacaatagtacaagataacagttgtgactagactgataattctctatacaaggaatggatttaaaattgttccct 314  Q
    ||||| ||||||||||||| || |||||||||||   || |||||||||||||| |||||| |||| ||||||||||||    
T  7812014 tgtctgcaatagtacaagacaatagttgtgactacgttggtaattctctatacatggaatgaatttgaaattgttccct 7811936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 312
Target Start/End: Original strand, 18172131 - 18172257
Alignment:
Q  188 aaggacataatacaattgtacattcactacctccaccacccaacttct--tgtctacaatagtacaagataacagttgtgactagactgataattctcta 285  Q
    ||||||||| ||||||||||||  |||||||||||| || | | | ||  |||||||||| |||||||| ||||| ||||||||  ||| | ||||||||    
T  18172131 aaggacatagtacaattgtacaaccactacctccactactccaatccttgtgtctacaattgtacaagacaacagatgtgactacgctggttattctcta 18172230  T
Q  286 tacaaggaatggatttaaaattgttcc 312  Q
    || | |||| | |||| ||||||||||    
T  18172231 taaatggaacgaatttgaaattgttcc 18172257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 314
Target Start/End: Complemental strand, 25592621 - 25592542
Alignment:
Q  236 tgtctacaatagtacaagat-aacagttgtgactagactgataattctctatacaaggaatggatttaaaattgttccct 314  Q
    ||||| |||||||||||||  |||||||||||||| |||| || |||| || |||||||||||||||  |||||||||||    
T  25592621 tgtctgcaatagtacaagaacaacagttgtgactacactggtatttctttacacaaggaatggatttggaattgttccct 25592542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 23006027 - 23006092
Alignment:
Q  121 agctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaatgagagcctagag 186  Q
    ||||||||||||||||||||||||||| |||||||  || |||||| |||| |||  |||||||||    
T  23006027 agctgaagttagttaaatgttgttattctgaatgcatatgattgcaaaaggtatggaagcctagag 23006092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 23782339 - 23782274
Alignment:
Q  121 agctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaatgagagcctagag 186  Q
    ||||||||||||||||||||||||||| |||||||  || |||||| |||| |||  |||||||||    
T  23782339 agctgaagttagttaaatgttgttattctgaatgcatatgattgcaaaaggtatggaagcctagag 23782274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 14325347 - 14325401
Alignment:
Q  121 agctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaatg 175  Q
    ||||||||||||||||||||||||||| ||||| |  || ||||||||| |||||    
T  14325347 agctgaagttagttaaatgttgttattctgaatacatatgattgcagaatgaatg 14325401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 14418357 - 14418411
Alignment:
Q  121 agctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaatg 175  Q
    ||||||||||||||||||||||||||| ||||| |  || ||||||||| |||||    
T  14418357 agctgaagttagttaaatgttgttattctgaatacatatgattgcagaatgaatg 14418411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 314
Target Start/End: Complemental strand, 17867565 - 17867496
Alignment:
Q  245 tagtacaagataacagttgtgactagactgataattctctatacaaggaatggatttaaaattgttccct 314  Q
    |||||||||||||||  |||| |||  ||| | ||||||||| ||||||||| |||| ||||||||||||    
T  17867565 tagtacaagataacaactgtgtctactctggttattctctattcaaggaatgaatttgaaattgttccct 17867496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 314
Target Start/End: Complemental strand, 17877348 - 17877279
Alignment:
Q  245 tagtacaagataacagttgtgactagactgataattctctatacaaggaatggatttaaaattgttccct 314  Q
    |||||||||||||||  |||| |||  ||| | ||||||||| ||||||||| |||| ||||||||||||    
T  17877348 tagtacaagataacaactgtgtctactctggttattctctattcaaggaatgaatttgaaattgttccct 17877279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 17445460 - 17445496
Alignment:
Q  1 ttaaatgtctttaattcaaacatatgttctggaagaa 37  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  17445460 ttaaatgtcttgaattcaagcatatgttctggaagaa 17445496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 173
Target Start/End: Complemental strand, 19876011 - 19875960
Alignment:
Q  121 agctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaa 173  Q
    ||||||||||||||||||||||||||| | |||||  || |||||||||||||    
T  19876011 agctgaagttagttaaatgttgttattct-aatgcatatgattgcagaaggaa 19875960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 314
Target Start/End: Complemental strand, 32335788 - 32335752
Alignment:
Q  278 attctctatacaaggaatggatttaaaattgttccct 314  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  32335788 attctctatacatggaatggatttgaaattgttccct 32335752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 4e-23; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 190 - 314
Target Start/End: Original strand, 13172464 - 13172590
Alignment:
Q  190 ggacataatacaattgtacattcactacctccaccacccaacttct--tgtctacaatagtacaagataacagttgtgactagactgataattctctata 287  Q
    ||||||| ||||||||||||  |||||||||||| || | ||| ||  | ||| ||||||||||||| |||| ||||||||| |||| || |||||||||    
T  13172464 ggacatagtacaattgtacaaccactacctccactactccactcctcatatctgcaatagtacaagacaacaattgtgactacactggtatttctctata 13172563  T
Q  288 caaggaatggatttaaaattgttccct 314  Q
    |||||||||||||| ||||||||||||    
T  13172564 caaggaatggatttgaaattgttccct 13172590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 65 - 143
Target Start/End: Original strand, 7487832 - 7487911
Alignment:
Q  65 gtctaccagaagctgacgtgatcagaagttgaagttcatcagaagttaaagact-ggagctgaagttagttaaatgttgt 143  Q
    ||||||||||||||||||| |||||||| ||||| |||||||||||| |||||| | |||||||||||||||||||||||    
T  7487832 gtctaccagaagctgacgtcatcagaagctgaagatcatcagaagttgaagactagaagctgaagttagttaaatgttgt 7487911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 13172301 - 13172378
Alignment:
Q  88 agaagttgaagttcatcagaagttaaagactgga-gctgaagttagttaaatgttgttattttgaatgctcatcattg 164  Q
    ||||| ||||| |||||||||| | ||||||| | |||||||||||||||||||||||||||| ||||| ||||||||    
T  13172301 agaagatgaagatcatcagaagctgaagactgaaagctgaagttagttaaatgttgttatttttaatgcacatcattg 13172378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 5035374 - 5035303
Alignment:
Q  243 aatagtacaagataacagttgtgactagactgataattctctatacaaggaatggatttaaaattgttccct 314  Q
    ||||||||||||||||||||||  |||  ||| | ||||||||| ||||||||| |||| ||||||||||||    
T  5035374 aatagtacaagataacagttgtatctacgctggttattctctattcaaggaatgaatttgaaattgttccct 5035303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 314
Target Start/End: Original strand, 14304381 - 14304436
Alignment:
Q  259 agttgtgactagactgataattctctatacaaggaatggatttaaaattgttccct 314  Q
    |||||||||||  ||| ||||||||||||||||||||| |||| ||||||||||||    
T  14304381 agttgtgactacgctggtaattctctatacaaggaatgaatttgaaattgttccct 14304436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 9064158 - 9064226
Alignment:
Q  121 agctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaatgagagcctagagcaa 189  Q
    ||||| ||||||||||| ||||||||| ||||| |  ||||||| ||||||||||  ||||| ||||||    
T  9064158 agctggagttagttaaaagttgttattctgaattcatatcattgtagaaggaatggaagcctggagcaa 9064226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 314
Target Start/End: Original strand, 18056456 - 18056492
Alignment:
Q  278 attctctatacaaggaatggatttaaaattgttccct 314  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  18056456 attctctatacaaggaatgaatttgaaattgttccct 18056492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 191 - 314
Target Start/End: Original strand, 17916934 - 17917059
Alignment:
Q  191 gacataatacaattgtacattcactacctccaccacccaact--tcttgtctacaatagtacaagataacagttgtgactagactgataattctctatac 288  Q
    |||||| |||||||||||| ||||| ||||||| || | |||  |||||||| || || ||||||||| ||||||||||||  ||||| ||||||||| |    
T  17916934 gacatagtacaattgtacaatcactgcctccactactccactcctcttgtctgcagtaatacaagatatcagttgtgactacgctgatcattctctattc 17917033  T
Q  289 aaggaatggatttaaaattgttccct 314  Q
    |||||||| |||||||||||||||||    
T  17917034 aaggaatgaatttaaaattgttccct 17917059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 314
Target Start/End: Complemental strand, 18558014 - 18557936
Alignment:
Q  236 tgtctacaatagtacaagataacagttgtgactagactgataattctctatacaaggaatggatttaaaattgttccct 314  Q
    ||||| ||||||| ||| | |||| |||||||||  ||| |||||||| || |||||||||||||| ||||||||||||    
T  18558014 tgtctgcaatagttcaaaacaacaattgtgactacgctggtaattctccattcaaggaatggatttgaaattgttccct 18557936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 18558209 - 18558123
Alignment:
Q  104 cagaagttaaagactgga-gctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaatgagagcctagagcaa 189  Q
    |||||| | ||||||||| ||||||||||||||||| | ||  |||||| ||| ||||||||||||||||||   ||||||||||||    
T  18558209 cagaagctgaagactggaagctgaagttagttaaatatcgtccttttgattgcacatcattgcagaaggaatataagcctagagcaa 18558123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 5e-19; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 23589921 - 23589833
Alignment:
Q  88 agaagttgaagttcatcagaagttaaagactgga-gctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaatg 175  Q
    |||||||| |||| |||||||| | ||||||||| |||||||||||||||||||||||||| |||||||  || |||||||||||||||    
T  23589921 agaagttggagtttatcagaagctgaagactggaagctgaagttagttaaatgttgttattctgaatgcatatgattgcagaaggaatg 23589833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 312
Target Start/End: Original strand, 2156414 - 2156490
Alignment:
Q  236 tgtctacaatagtacaagataacagttgtgactagactgataattctctatacaaggaatggatttaaaattgttcc 312  Q
    ||||||| ||||||||||| || |||||| ||||  ||| |||||||||||||||||||||||||| ||||||||||    
T  2156414 tgtctaccatagtacaagacaatagttgtaactacgctggtaattctctatacaaggaatggatttgaaattgttcc 2156490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 307
Target Start/End: Complemental strand, 23589760 - 23589639
Alignment:
Q  188 aaggacataatacaattgtacattcactacctccaccacccaact--tcttgtctacaatagtacaagataacagttgtgactagactgataattctcta 285  Q
    ||||||||| ||||||||||||  |||||| ||||| || | |||  |  |||||||||||||||||||  ||| |||||||||  ||| | ||||||||    
T  23589760 aaggacatagtacaattgtacaaccactacatccactactccactcattgtgtctacaatagtacaagactacaattgtgactacgctggttattctcta 23589661  T
Q  286 tacaaggaatggatttaaaatt 307  Q
    |||||||||||||||| |||||    
T  23589660 tacaaggaatggatttgaaatt 23589639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 26119792 - 26119860
Alignment:
Q  121 agctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaatgagagcctagagcaa 189  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||| ||||||||  ||||| ||||||    
T  26119792 agctgaagttagttaactgttgttattttgaatgcatatcattgcaaaaggaatggaagcctggagcaa 26119860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 20567996 - 20567923
Alignment:
Q  102 atcagaagttaaagactgga-gctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaatg 175  Q
    |||||||| | ||||||||| |||||||||||||||||||||||||| | |||||| || |||||||||||||||    
T  20567996 atcagaagctgaagactggaagctgaagttagttaaatgttgttattct-aatgcttatgattgcagaaggaatg 20567923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 314
Target Start/End: Original strand, 26119922 - 26120047
Alignment:
Q  191 gacataatacaattgtacattcactacctccaccacccaacttct--tgtctacaatagtacaagataacagttgtgactagactgataattctctatac 288  Q
    |||||| ||||||||||||  |||||||||||| || | ||| ||  ||| | ||  ||||||||||||||| ||||||||  ||| | ||||||||| |    
T  26119922 gacatagtacaattgtacaaccactacctccactactccactcctcatgtttgcagaagtacaagataacagctgtgactatgctggttattctctattc 26120021  T
Q  289 aaggaatggatttaaaattgttccct 314  Q
    |||||||| |||| ||||||||||||    
T  26120022 aaggaatgaatttgaaattgttccct 26120047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 34638689 - 34638641
Alignment:
Q  56 tcagaagctgtctaccagaagctgacgtgatcagaagttgaagttcatca 105  Q
    ||||||||||| ||| |||||||||||| |||||||| ||||||||||||    
T  34638689 tcagaagctgt-tactagaagctgacgtcatcagaagctgaagttcatca 34638641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 5e-19; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 312
Target Start/End: Complemental strand, 20568131 - 20568055
Alignment:
Q  236 tgtctacaatagtacaagataacagttgtgactagactgataattctctatacaaggaatggatttaaaattgttcc 312  Q
    ||||| ||||||||||||| ||||||||||||||   || |||||||||||||||||||| ||||||||||||||||    
T  20568131 tgtctgcaatagtacaagacaacagttgtgactacgttggtaattctctatacaaggaattgatttaaaattgttcc 20568055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 314
Target Start/End: Complemental strand, 21846193 - 21846065
Alignment:
Q  188 aaggacataatacaattgtacattcactacctccaccacccaacttct--tgtctacaatagtacaagataacagttgtgactagactgataattctcta 285  Q
    ||||||||| ||||||||||||  |||||||||||  || | ||| ||  ||||| || |||||||||||||||||| ||||||   || | ||||||||    
T  21846193 aaggacatagtacaattgtacaaccactacctccattactccactcctcatgtctgcagtagtacaagataacagttttgactacgttggttattctcta 21846094  T
Q  286 tacaaggaatggatttaaaattgttccct 314  Q
    ||||||||||| |||| ||||||||||||    
T  21846093 tacaaggaatgaatttgaaattgttccct 21846065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 21846329 - 21846252
Alignment:
Q  113 aagactgga-gctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaatgagagcctagagcaa 189  Q
    ||||||||| |||||||||||||||| ||||||||| |||||||  ||||||||||||||||||  ||||||||||||    
T  21846329 aagactggaagctgaagttagttaaaagttgttattctgaatgcatatcattgcagaaggaatggaagcctagagcaa 21846252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 20568350 - 20568256
Alignment:
Q  80 acgtgatcagaagttgaagttcatcagaagttaaagactgga-gctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaat 174  Q
    |||| |||||||| ||||| |||||||||  | ||||||||| |||||||||||||||||||||| | ||||| ||| |||||||| |||||||||    
T  20568350 acgtcatcagaaggtgaagatcatcagaatctgaagactggaagctgaagttagttaaatgttgtca-tttgattgcacatcattgtagaaggaat 20568256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 107
Target Start/End: Original strand, 24440594 - 24440645
Alignment:
Q  56 tcagaagctgtctaccagaagctgacgtgatcagaagttgaagttcatcaga 107  Q
    |||||||||||||||||||||||||||| |||||||| || |||||||||||    
T  24440594 tcagaagctgtctaccagaagctgacgtcatcagaagatggagttcatcaga 24440645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 24158014 - 24157937
Alignment:
Q  113 aagactgga-gctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaatgagagcctagagcaa 189  Q
    ||||||||| |||||||||||||||| ||||||||| |||||||  ||||||| ||||||||||  ||||| ||||||    
T  24158014 aagactggaagctgaagttagttaaaagttgttattctgaatgcatatcattgtagaaggaatggaagcctggagcaa 24157937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 268
Target Start/End: Original strand, 24440786 - 24440868
Alignment:
Q  188 aaggacataatacaattgtacattcactacctccaccacccaa--cttcttgtctacaatagtacaagataacagttgtgact 268  Q
    ||||||||| ||||||||||||  |||||||||||| || | |  |||| ||||| |||||||||||||| |||| |||||||    
T  24440786 aaggacatagtacaattgtacaaccactacctccactactccactcttcatgtctgcaatagtacaagattacagctgtgact 24440868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 174
Target Start/End: Original strand, 10896323 - 10896411
Alignment:
Q  87 cagaagttgaagttcatcagaagttaaagactgg-agctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaat 174  Q
    |||||||||||| |||||||||||| |||| ||| || |||||||||||||| | |||  |||||| | | |||||||| |||| ||||    
T  10896323 cagaagttgaagatcatcagaagttgaagattggaagttgaagttagttaaaagctgtctttttgattacacatcattgtagaaagaat 10896411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 312
Target Start/End: Original strand, 10896553 - 10896617
Alignment:
Q  248 tacaagataacagttgtgactagactgataattctctatacaaggaatggatttaaaattgttcc 312  Q
    ||||||| |||| |||||||||   || |||||||||||| |||||||| |||| ||||||||||    
T  10896553 tacaagacaacaattgtgactacgttggtaattctctataaaaggaatgaatttgaaattgttcc 10896617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 5e-19; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 23054595 - 23054491
Alignment:
Q  71 cagaagctgacgtgatcagaagttgaagttcatcagaagttaaagactgga-gctgaagttagttaaatgttgttattttgaatgctcatcattgcagaa 169  Q
    |||||||||||||  || |||| | ||| |||||||||| | ||||||||| |||||||| ||||||||||||| ||||||| ||| |||||||||||||    
T  23054595 cagaagctgacgtcgtccgaagctaaagatcatcagaagctgaagactggaagctgaagtcagttaaatgttgtcattttgattgcacatcattgcagaa 23054496  T
Q  170 ggaat 174  Q
    |||||    
T  23054495 ggaat 23054491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 18130085 - 18130168
Alignment:
Q  231 cttcttgtctacaatagtacaagataacagttgtgactagactgataattctctatacaaggaatggatttaaaattgttccct 314  Q
    |||| ||||| |||||||||||||||||||||||| |||  ||| | ||||||||| ||| ||||| |||| ||||||||||||    
T  18130085 cttcatgtctgcaatagtacaagataacagttgtgtctacgctggttattctctattcaatgaatgaatttgaaattgttccct 18130168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 16870150 - 16870073
Alignment:
Q  113 aagactgga-gctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaatgagagcctagagcaa 189  Q
    ||||||||| |||||||||||||||| ||| ||||| |||||||  |||||||||||| |||||| ||||| ||||||    
T  16870150 aagactggaagctgaagttagttaaaagttattattctgaatgcatatcattgcagaatgaatgaaagcctggagcaa 16870073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 312
Target Start/End: Complemental strand, 18614903 - 18614826
Alignment:
Q  236 tgtctacaatagtacaagat-aacagttgtgactagactgataattctctatacaaggaatggatttaaaattgttcc 312  Q
    ||||| |||||||||||||  ||||||||||||||  |||||| | ||||||||| ||||||||||| ||||||||||    
T  18614903 tgtctgcaatagtacaagaacaacagttgtgactacgctgatattcctctatacatggaatggatttgaaattgttcc 18614826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 20909407 - 20909332
Alignment:
Q  238 tctacaatagtacaagat-aacagttgtgactagactgataattctctatacaaggaatggatttaaaattgttcc 312  Q
    |||||||||||||||||  ||||||||||||||  ||| || ||||||||||| ||||| ||||| ||||||||||    
T  20909407 tctacaatagtacaagaacaacagttgtgactacgctggtatttctctatacatggaatagatttgaaattgttcc 20909332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 191
Target Start/End: Original strand, 18129887 - 18129993
Alignment:
Q  86 tcagaagttgaagttcatcagaagttaaagactgga-gctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaatgagagcctag 184  Q
    ||||||| ||||||||||||||   | ||| ||||| |||||||||||||||| ||||||||| ||||  | | |||||||||||||||| | ||||| |    
T  18129887 tcagaagctgaagttcatcagagtctgaagtctggaagctgaagttagttaaaagttgttattctgaagacacgtcattgcagaaggaataaaagcctgg 18129986  T
Q  185 agcaagg 191  Q
    || ||||    
T  18129987 agtaagg 18129993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 314
Target Start/End: Original strand, 20110037 - 20110108
Alignment:
Q  243 aatagtacaagataacagttgtgactagactgataattctctatacaaggaatggatttaaaattgttccct 314  Q
    |||||||||||| ||||  ||||||||  ||| |||||||||||||||||||| ||||| | ||| ||||||    
T  20110037 aatagtacaagacaacatatgtgactacgctggtaattctctatacaaggaatagatttgatattattccct 20110108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 314
Target Start/End: Complemental strand, 23054367 - 23054289
Alignment:
Q  236 tgtctacaatagtacaagataacagttgtgactagactgataattctctatacaaggaatggatttaaaattgttccct 314  Q
    ||||| ||||||||||||| ||||  ||||||||  ||| || ||||||||||| |||||| | || ||||||||||||    
T  23054367 tgtctgcaatagtacaagacaacacctgtgactacgctggtatttctctatacatggaatgaaattgaaattgttccct 23054289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 264
Target Start/End: Original strand, 18517236 - 18517269
Alignment:
Q  231 cttcttgtctacaatagtacaagataacagttgt 264  Q
    |||| |||||||||||||||||||||||||||||    
T  18517236 cttcatgtctacaatagtacaagataacagttgt 18517269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 151
Target Start/End: Original strand, 20109825 - 20109889
Alignment:
Q  87 cagaagttgaagttcatcagaagttaaagactgga-gctgaagttagttaaatgttgttattttga 151  Q
    |||||||||| || ||||||||| | ||||||||| |||||||||||||| ||||||| |||||||    
T  20109825 cagaagttgacgt-catcagaagctgaagactggaagctgaagttagttatatgttgtcattttga 20109889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 20909653 - 20909604
Alignment:
Q  56 tcagaagctgtctaccagaagctgacgtgatcagaagttgaagttcatca 105  Q
    ||||||| |||  ||||||||||||||| |||||||||||||| ||||||    
T  20909653 tcagaagttgttcaccagaagctgacgtcatcagaagttgaagatcatca 20909604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 8728940 - 8729045
Alignment:
Q  85 atcagaagttgaagttcatcagaagttaaagactggag-ctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaatgagagccta 183  Q
    |||||||| ||||||||||||||   | |||||||||  |||||||| ||||||||||||||||||||||||  || |||||||||||||||  |||||     
T  8728940 atcagaagctgaagttcatcagagtctgaagactggaaactgaagtttgttaaatgttgttattttgaatgcatatgattgcagaaggaatggaagcctg 8729039  T
Q  184 gagcaa 189  Q
    ||||||    
T  8729040 gagcaa 8729045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 9080827 - 9080932
Alignment:
Q  85 atcagaagttgaagttcatcagaagttaaagactggag-ctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaatgagagccta 183  Q
    |||||||| ||||||||||||||   | |||||||||  |||||||| ||||||||||||||||||||||||  || |||||||||||||||  |||||     
T  9080827 atcagaagctgaagttcatcagagtctgaagactggaaactgaagtttgttaaatgttgttattttgaatgcatatgattgcagaaggaatggaagcctg 9080926  T
Q  184 gagcaa 189  Q
    ||||||    
T  9080927 gagcaa 9080932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 189
Target Start/End: Original strand, 19197797 - 19197927
Alignment:
Q  60 aagctgtctaccagaagctgacgtgatcagaagttgaagttcatcagaagttaaagactgg-agctgaagttagttaaatgttgttattttgaatgctca 158  Q
    ||||||| |||||||||||||||| |||||||| | ||| |||||||||| | |||||||| |  |  |||||| ||||| |||||||| |||||||  |    
T  19197797 aagctgtttaccagaagctgacgtcatcagaagctaaagatcatcagaagctgaagactggaatattcagttagctaaattttgttattctgaatgcata 19197896  T
Q  159 tcattgcagaaggaatgagagcctagagcaa 189  Q
    | |||||||||||||||  ||||| ||||||    
T  19197897 tgattgcagaaggaatggaagcctggagcaa 19197927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 174
Target Start/End: Complemental strand, 10852007 - 10851932
Alignment:
Q  100 tcatcagaagttaaagactgga-gctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaat 174  Q
    |||||||||| | |||| |||| | |||||||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  10852007 tcatcagaagctgaagattggaagttgaagttagttaaatgttgtcattttgattgcacatcattgcagaaggaat 10851932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 17697804 - 17697733
Alignment:
Q  104 cagaagttaaagactgga-gctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaat 174  Q
    |||||||| ||||||||| |||||||||||||||||||||| ||| | | ||| ||||||||||||||||||    
T  17697804 cagaagttgaagactggaagctgaagttagttaaatgttgtcattctaattgcgcatcattgcagaaggaat 17697733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 314
Target Start/End: Complemental strand, 10851808 - 10851730
Alignment:
Q  236 tgtctacaatagtacaagataacagttgtgactagactgataattctctatacaaggaatggatttaaaattgttccct 314  Q
    ||||| ||||||||||||| ||||| ||| ||||  ||| ||||||||||| |||||||||||||| || |||||||||    
T  10851808 tgtctgcaatagtacaagacaacagctgtaactacgctggtaattctctatgcaaggaatggatttgaatttgttccct 10851730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 314
Target Start/End: Complemental strand, 16882334 - 16882210
Alignment:
Q  192 acataatacaattgtacattcactacctccaccacccaact--tcttgtctacaatagtacaagataacagttgtgactagactgataattctctataca 289  Q
    ||||| ||||||||||||  |||||||||||  || | |||  |||||||| || |||||||||| ||||||||||||||  ||| | ||| | ||| ||    
T  16882334 acatagtacaattgtacaaccactacctccattactccactcctcttgtctgcagtagtacaagacaacagttgtgactacgctggttattatatattca 16882235  T
Q  290 aggaatggatttaaaattgttccct 314  Q
    ||||||| |||| ||||||||||||    
T  16882234 aggaatgaatttgaaattgttccct 16882210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 269
Target Start/End: Original strand, 8729142 - 8729180
Alignment:
Q  231 cttcttgtctacaatagtacaagataacagttgtgacta 269  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  8729142 cttcatgtctacaatagtacaagataacagttgtgacta 8729180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 269
Target Start/End: Original strand, 9081029 - 9081067
Alignment:
Q  231 cttcttgtctacaatagtacaagataacagttgtgacta 269  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  9081029 cttcatgtctacaatagtacaagataacagttgtgacta 9081067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 10852058 - 10851992
Alignment:
Q  32 gaagaaaagtggttctgaagatgctcagaagctgtctaccagaagctgacgtgatcagaagttgaag 98  Q
    ||||| ||| ||||||||||||  ||||||||||||||||||||| |||| | |||||||| |||||    
T  10852058 gaagagaagaggttctgaagatcatcagaagctgtctaccagaagttgacatcatcagaagctgaag 10851992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 314
Target Start/End: Original strand, 14077509 - 14077587
Alignment:
Q  236 tgtctacaatagtacaagataacagttgtgactagactgataattctctatacaaggaatggatttaaaattgttccct 314  Q
    ||||| ||||||||||||| ||| ||||||||||  ||| |||||  ||||| |||||||| |||| ||||||||||||    
T  14077509 tgtctgcaatagtacaagacaacggttgtgactacgctggtaattacctatagaaggaatgaatttgaaattgttccct 14077587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 16794264 - 16794318
Alignment:
Q  121 agctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaatg 175  Q
    ||||||||||||||||| ||||||||| |||||||  || |||||||||||||||    
T  16794264 agctgaagttagttaaaagttgttattctgaatgcatatgattgcagaaggaatg 16794318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 314
Target Start/End: Complemental strand, 17697610 - 17697532
Alignment:
Q  236 tgtctacaatagtacaagataacagttgtgactagactgataattctctatacaaggaatggatttaaaattgttccct 314  Q
    ||||| ||||| | ||||| |||| ||||||||| |||| ||||| ||||||||||||||| |||| |||| |||||||    
T  17697610 tgtctgcaatatttcaagacaacaattgtgactatactggtaattatctatacaaggaatgaatttgaaatggttccct 17697532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 14077301 - 14077341
Alignment:
Q  60 aagctgtctaccagaagctgacgtgatcagaagttgaagtt 100  Q
    |||||||||||||||||||||||| |||||||| |||||||    
T  14077301 aagctgtctaccagaagctgacgtcatcagaagctgaagtt 14077341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 22766530 - 22766580
Alignment:
Q  139 gttgttattttgaatgctcatcattgcagaaggaatgagagcctagagcaa 189  Q
    ||||||||| |||||||| || |||||||||||||||  ||||||||||||    
T  22766530 gttgttattctgaatgcttatgattgcagaaggaatggaagcctagagcaa 22766580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 27374755 - 27374689
Alignment:
Q  245 tagtacaagataacagttgtgactagactgataattctctatacaaggaatggatttaaaattgttc 311  Q
    |||||||||| ||||||||||||||  ||| | ||||| ||| ||||||||| |||| |||||||||    
T  27374755 tagtacaagacaacagttgtgactacgctggttattctatattcaaggaatgaatttgaaattgttc 27374689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 14077332 - 14077393
Alignment:
Q  121 agctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaatgagagcct 182  Q
    ||||||||||||||| ||||||| ||||||| | | |||||||||||||  ||| |||||||    
T  14077332 agctgaagttagttatatgttgtcattttgattacacatcattgcagaaccaataagagcct 14077393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 189
Target Start/End: Original strand, 10305 - 10407
Alignment:
Q  88 agaagttgaagttcatcagaagttaaagactgga-gctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaatgagagcctagag 186  Q
    ||||| || |||||||||||   ||||||||||| |||||||||||||||||||||||||| | |||||  |||||||| |||||||||  |||| ||||    
T  10305 agaagctggagttcatcagagtctaaagactggaagctgaagttagttaaatgttgttattcttaatgcatatcattgcggaaggaatgcaagccgagag 10404  T
Q  187 caa 189  Q
    |||    
T  10405 caa 10407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 314
Target Start/End: Original strand, 10466 - 10594
Alignment:
Q  188 aaggacataatacaattgtacattcactacctccaccacccaacttct--tgtctacaatagtacaagataacagttgtgactagactgataattctcta 285  Q
    ||||| ||| ||||||||||||  |||||||||||| || | ||| ||  ||||| || ||||||||||||||||||| | |||  ||| | ||||||||    
T  10466 aaggatatagtacaattgtacaaccactacctccactactccactcctcatgtctgcagtagtacaagataacagttgcggctacgctggttattctcta 10565  T
Q  286 tacaaggaatggatttaaaattgttccct 314  Q
    | ||||||||| ||||  |||||||||||    
T  10566 ttcaaggaatgaatttggaattgttccct 10594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 314
Target Start/End: Original strand, 940 - 1068
Alignment:
Q  188 aaggacataatacaattgtacattcactacctccaccacccaacttct--tgtctacaatagtacaagataacagttgtgactagactgataattctcta 285  Q
    |||| |||| ||||||||||||  |||||||||||| || | |||| |  |||||||| ||||||| ||||| |||||||||||  ||| | ||||||||    
T  940 aagggcatagtacaattgtacaaccactacctccactactccacttatcatgtctacagtagtacaggataatagttgtgactacgctggttattctcta 1039  T
Q  286 tacaaggaatggatttaaaattgttccct 314  Q
    | ||| ||||| |||| ||||||||||||    
T  1040 ttcaatgaatgaatttgaaattgttccct 1068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 175
Target Start/End: Original strand, 776 - 867
Alignment:
Q  85 atcagaagttgaagttcatcagaagttaaagactgga-gctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaatg 175  Q
    ||||||||||| ||||||| |||   | ||||||||| |||||||||||||||||||||||||| || ||||  ||||||||| ||||||||    
T  776 atcagaagttggagttcataagagtctgaagactggaagctgaagttagttaaatgttgttattctgtatgcatatcattgcataaggaatg 867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 235 - 312
Target Start/End: Complemental strand, 59559 - 59482
Alignment:
Q  235 ttgtctacaatagtacaagataacagttgtgactagactgataattctctatacaaggaatggatttaaaattgttcc 312  Q
    |||||||||||||||||||| ||||  ||||||||  |||  ||||||||||||| ||||||||||| ||||||||||    
T  59559 ttgtctacaatagtacaagacaacaactgtgactacgctggaaattctctatacatggaatggatttgaaattgttcc 59482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 13027987 - 13027882
Alignment:
Q  85 atcagaagttgaagttcatcagaagttaaagactgga-gctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaatgagagccta 183  Q
    |||||||| || |||||||||||   | ||||| ||| |||||||||||||||||||| ||||| |||||||  ||||||||||||||||||  |||||     
T  13027987 atcagaagctggagttcatcagagtctgaagacgggaagctgaagttagttaaatgtttttattctgaatgcatatcattgcagaaggaatggaagcctg 13027888  T
Q  184 gagcaa 189  Q
    ||||||    
T  13027887 gagcaa 13027882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 314
Target Start/End: Original strand, 19889061 - 19889189
Alignment:
Q  188 aaggacataatacaattgtacattcactacctccaccacccaacttct--tgtctacaatagtacaagataacagttgtgactagactgataattctcta 285  Q
    ||||||||| ||| ||||||||  |||||||||||| || | ||| ||  ||||| || |||||||||||||||||||||||||  | ||| |||||||     
T  19889061 aaggacatagtacgattgtacaaccactacctccactactccactcctcatgtctccattagtacaagataacagttgtgactacgccgattattctctt 19889160  T
Q  286 tacaaggaatggatttaaaattgttccct 314  Q
      ||||||||| |||| ||||||||||||    
T  19889161 ctcaaggaatgaatttgaaattgttccct 19889189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 18774056 - 18773973
Alignment:
Q  231 cttcttgtctacaatagtacaagataacagttgtgactagactgataattctctatacaaggaatggatttaaaattgttccct 314  Q
    |||| ||||| || ||||||||||||||| ||||| |||  ||| | ||||||||| ||||||||| |||| ||||||||||||    
T  18774056 cttcatgtctgcagtagtacaagataacaattgtgtctacgctggttattctctattcaaggaatgaatttgaaattgttccct 18773973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 172
Target Start/End: Original strand, 16324425 - 16324508
Alignment:
Q  90 aagttgaagttcatcagaagttaaagactgga-gctgaagttagttaaatgttgttattttgaatgctcatcattgcagaagga 172  Q
    |||||| ||||||||||||  | ||||||||| |||||| ||||| ||| ||||||||| |||||||  ||||||| |||||||    
T  16324425 aagttggagttcatcagaatctgaagactggatgctgaaattagtcaaaagttgttattctgaatgcatatcattgtagaagga 16324508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 314
Target Start/End: Original strand, 20571123 - 20571194
Alignment:
Q  243 aatagtacaagataacagttgtgactagactgataattctctatacaaggaatggatttaaaattgttccct 314  Q
    |||||| |||||||||| ||||| |||  ||| | ||||||||| ||||||||| |||| ||||||||||||    
T  20571123 aatagtgcaagataacaattgtgtctacgctggttattctctattcaaggaatgaatttgaaattgttccct 20571194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 314
Target Start/End: Original strand, 16324633 - 16324711
Alignment:
Q  236 tgtctacaatagtacaagataacagttgtgactagactgataattctctatacaaggaatggatttaaaattgttccct 314  Q
    |||||||| |||||||||||||||  | ||||||  ||  | ||||||||| ||||||||| |||| ||||||||||||    
T  16324633 tgtctacagtagtacaagataacaactttgactacgcttgttattctctattcaaggaatgaatttgaaattgttccct 16324711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 312
Target Start/End: Original strand, 10661280 - 10661357
Alignment:
Q  236 tgtctacaatagtacaagat-aacagttgtgactagactgataattctctatacaaggaatggatttaaaattgttcc 312  Q
    ||||| |||||||||||||  ||||| ||||||||  ||| || | ||||||||| ||||||||||| ||||||||||    
T  10661280 tgtctgcaatagtacaagaacaacagctgtgactacgctggtattcctctatacatggaatggatttgaaattgttcc 10661357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 312
Target Start/End: Original strand, 10875425 - 10875502
Alignment:
Q  236 tgtctacaatagtacaagat-aacagttgtgactagactgataattctctatacaaggaatggatttaaaattgttcc 312  Q
    ||||| |||||||||||||  ||||| ||||||||  ||| || | ||||||||| ||||||||||| ||||||||||    
T  10875425 tgtctgcaatagtacaagaacaacagctgtgactacgctggtattcctctatacatggaatggatttgaaattgttcc 10875502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 3283 - 3356
Alignment:
Q  70 ccagaagctgacgtgatcagaagttgaagttcatcagaagttaaag-actgg-agctgaagttagttaaatgtt 141  Q
    ||||||||||||||||||||||  ||||| |||||||||||| ||| | ||| |||||||||||||||||||||    
T  3283 ccagaagctgacgtgatcagaatctgaagatcatcagaagttgaagaaatggaagctgaagttagttaaatgtt 3356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 2929 - 2852
Alignment:
Q  32 gaagaaaagtggttctgaagatgctcagaagctgtctaccagaagctgacgtgatcagaagttgaagttcatcagaag 109  Q
    ||||| ||| ||||||||| ||| |||||||||||  || |||||||||  |||||||||| | ||| ||||||||||    
T  2929 gaagacaagaggttctgaacatgatcagaagctgttcactagaagctgatatgatcagaagctcaagatcatcagaag 2852  T

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Target: scaffold0490 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 86 - 185
Target Start/End: Complemental strand, 7537 - 7437
Alignment:
Q  86 tcagaagttgaagttcatcagaagttaaagactgga-gctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaatgagagcctag 184  Q
    ||||||| ||||||||| ||||   ||||||||||| |||  ||||||||||| ||||||||||||||| |  || |||||||||||||||  |||||||    
T  7537 tcagaagctgaagttcaacagagtctaaagactggaagctagagttagttaaaagttgttattttgaattcatatgattgcagaaggaatggaagcctag 7438  T
Q  185 a 185  Q
    |    
T  7437 a 7437  T

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Target: scaffold0498 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 312
Target Start/End: Original strand, 419 - 496
Alignment:
Q  236 tgtctacaatagtacaagat-aacagttgtgactagactgataattctctatacaaggaatggatttaaaattgttcc 312  Q
    ||||| |||||||||||||  ||||||||||||||  ||| || | ||| ||||||||||||||||| ||||||||||    
T  419 tgtctgcaatagtacaagaacaacagttgtgactacgctggtattcctccatacaaggaatggatttgaaattgttcc 496  T

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Target: scaffold0311 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 20254 - 20177
Alignment:
Q  113 aagactgga-gctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaatgagagcctagagcaa 189  Q
    ||||||||| |||| ||||||||||| ||||||||||||||  |  || |||||||||||||||  ||||||||||||    
T  20254 aagactggaagctggagttagttaaaagttgttattttgaactcatatgattgcagaaggaatggaagcctagagcaa 20177  T

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Target: scaffold0311; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 314
Target Start/End: Complemental strand, 20060 - 19991
Alignment:
Q  245 tagtacaagataacagttgtgactagactgataattctctatacaaggaatggatttaaaattgttccct 314  Q
    |||||||||||||||||| |  |||  ||| | ||||||||| ||||||||| |||| ||||||||||||    
T  20060 tagtacaagataacagttatatctacgctggttattctctattcaaggaatgaatttgaaattgttccct 19991  T

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Target: scaffold0522 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 185
Target Start/End: Original strand, 4164 - 4264
Alignment:
Q  86 tcagaagttgaagttcatcagaagttaaagactgga-gctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaatgagagcctag 184  Q
    ||||||| ||||||||| ||||   | ||||||||| |||| ||||||||||| ||||||||||||||| |  || |||| ||||||||||  |||||||    
T  4164 tcagaagctgaagttcaacagagtctgaagactggaagctggagttagttaaaagttgttattttgaattcatatgattgtagaaggaatggaagcctag 4263  T
Q  185 a 185  Q
    |    
T  4264 a 4264  T

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Target: scaffold0522; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 185
Target Start/End: Original strand, 11447 - 11547
Alignment:
Q  86 tcagaagttgaagttcatcagaagttaaagactgga-gctgaagttagttaaatgttgttattttgaatgctcatcattgcagaaggaatgagagcctag 184  Q
    ||||||| ||||||||| ||||   | ||||||||| |||| ||||||||||| ||||||||||||||| |  || |||| ||||||||||  |||||||    
T  11447 tcagaagctgaagttcaacagagtctgaagactggaagctggagttagttaaaagttgttattttgaattcatatgattgtagaaggaatggaagcctag 11546  T
Q  185 a 185  Q
    |    
T  11547 a 11547  T

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Target: scaffold0078 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 312
Target Start/End: Original strand, 31853 - 31969
Alignment:
Q  198 tacaattgtacattcactacctccaccacccaacttcttgtctacaatagtacaagat-aacagttgtgactagactgataattc-tctatacaaggaat 295  Q
    ||||| ||||||  |||||||||||| || |   || |||||| |||||||||||||  ||||||||||||||  ||| | |||| |||||||| |||||    
T  31853 tacaagtgtacaaccactacctccactactctgttttttgtctgcaatagtacaagaacaacagttgtgactacgctggttattcctctatacatggaat 31952  T
Q  296 ggatttaaaattgttcc 312  Q
    |||||| ||||||||||    
T  31953 ggatttgaaattgttcc 31969  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 312
Target Start/End: Complemental strand, 268784 - 268707
Alignment:
Q  236 tgtctacaatagtacaagat-aacagttgtgactagactgataattctctatacaaggaatggatttaaaattgttcc 312  Q
    ||||| |||||||||||||  || |||||||||||  ||| || | ||||||||| ||||||||||| ||||||||||    
T  268784 tgtctgcaatagtacaagaacaatagttgtgactacgctggtattcctctatacatggaatggatttgaaattgttcc 268707  T

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