View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4201-Insertion-14 (Length: 595)
Name: NF4201-Insertion-14
Description: NF4201
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4201-Insertion-14 |
 | |
|
| [»] scaffold0133 (2 HSPs) |
| |
|
| [»] scaffold0256 (1 HSPs) |
| | |
|
| [»] scaffold0144 (1 HSPs) |
| |
|
| [»] scaffold0511 (1 HSPs) |
| |
|
| [»] scaffold0230 (1 HSPs) |
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Alignment Details
Target: scaffold0133 (Bit Score: 512; Significance: 0; HSPs: 2)
Name: scaffold0133
Description:
Target: scaffold0133; HSP #1
Raw Score: 512; E-Value: 0
Query Start/End: Original strand, 7 - 595
Target Start/End: Complemental strand, 9340 - 8750
Alignment:
| Q |
7 |
agaagcaaataacaaacgatgctgtcaaagagtggctacagcaactgcgtgatgctgcttatgtgcttgatgatatattggatgaatgttcaataacctt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9340 |
agaagcaaataacaaacgatgctgtcaaagagtggctacagcaactgcgtgatgctgcttatgtgcttgatgatatattggatgaatgttcaataacctt |
9241 |
T |
|
| Q |
107 |
aaaagcacatggcgacaacaagcggatcactcgtttccatcctatgaagattttggctcgtcgcaacattgggaagaggatgaaggaggttgctaaaaag |
206 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||| || |
|
|
| T |
9240 |
aaaagcacatggtaacaacaagcggatcactcgtttccatcctatgaagattttggttcgtcgcaacattggaaagaggatgaaggagattgctaaagag |
9141 |
T |
|
| Q |
207 |
attcatgatattgctgaagaaaggatgaagttcggattacatgtgggggtcatcgagcgccaaccagaagatgaagagtggcggcaaactacgtctgtca |
306 |
Q |
| |
|
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||| |
|
|
| T |
9140 |
atcgacgatattgctgaagaaaggatgaagttcggattacatgtgggggtcatcgagcgccaaccagaagatgaagggcggcggcaaactacctctgtca |
9041 |
T |
|
| Q |
307 |
tcactgaatccaaagtatatggaagagacaaagataaagagcatattgtagagtttcttctaaggcatgctggtgacagtgaagaactctctgtctattc |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
9040 |
tcactgaatccaaagtatatggaagagacaaagataaagagcatattgtagagtttcttctacggcacgctggtgacagtgaagaactctctgtctattc |
8941 |
T |
|
| Q |
407 |
cattgttggccacggtggatatggaaaaacaacacttgctcaaacagtcttcaatgatgaaagggtaaagacacattttgacttgaaaatatgggt--gt |
504 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
8940 |
tattgttggccacggtggatatggaaaaacaacacttgctcaaacagtcttcaatgatgaaagggtaaagacacattttgacttgaaaatatgggtgtgt |
8841 |
T |
|
| Q |
505 |
gtttctggtgatatcaattcgatgaaagttttagagtccaccatagaaaacaccattggaaaaaatccacatctctcgtctttagagtcaa |
595 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8840 |
gtttctggtgatatcaatgcgatgaaagttttagagtccatcatagaaaacaccattggaaaaaatccacatctctcgtctttagagtcaa |
8750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133; HSP #2
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 7 - 595
Target Start/End: Complemental strand, 13688 - 13092
Alignment:
| Q |
7 |
agaagcaaataacaaacgatgctgtcaaagagtggctacagcaactgcgtgatgctgcttatgtgcttgatgatatattggatgaatgttcaataacctt |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
13688 |
agaagcaaataacaaacgatgctgtcaaagagtggctacagcaactgattgatgctgcttatgtgattgatgatatattggatgaatgttcaataacctt |
13589 |
T |
|
| Q |
107 |
aaaagcacatggcgacaacaagcggatcactcgtttccatcctatgaagattttggctcgtcgcaacattgggaagaggatgaaggaggttgctaaaaag |
206 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
13588 |
aagagcacatggcgacaacaagcggatcactcgtttccatcctatgaagattttggctcgtcgcaacattggaaagaggatgaaggaggttgctaaaaag |
13489 |
T |
|
| Q |
207 |
attcatgatattgctgaagaaaggatgaagttcggatt---acatgtgggggtca---tcgagcgccaaccagaagatgaagagtggcggcaaactacgt |
300 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||| ||| | | |||| |||||||||| | |||||| || ||||| |||||||| | |
|
|
| T |
13488 |
atcgatgatattgctgaagaaaggatgaagttcggattacaacaatttgcagtcacggaggagcgccaacgacgagatgatgaatggcgccaaactactt |
13389 |
T |
|
| Q |
301 |
ctgtcatcactgaatccaaagtatatggaagagacaaagataaagagcatattgtagagtttcttctaaggcatgctggtgacagtgaagaactctctgt |
400 |
Q |
| |
|
||| |||| ||| | ||||||||||||||||||||||||||||| || |||||||||||||| |||||||| || |||| ||||||||||||||||| |
|
|
| T |
13388 |
ctgctgtcaccgaaccgaaagtatatggaagagacaaagataaagaacagattgtagagtttctgctaaggcacgccagtgagagtgaagaactctctgt |
13289 |
T |
|
| Q |
401 |
ctattccattgttggccacggtggatatggaaaaacaacacttgctcaaacagtcttcaatgatgaaagggtaaagacacattttgacttgaaaatatgg |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
13288 |
ctattccattgttggccacggtggatatggaaaaacaacacttgctcaaatggtcttcaatgatgaaagtgtaaagacacattttgacttgaaaatatgg |
13189 |
T |
|
| Q |
501 |
--gtgtgtttctggtgatatcaattcgatgaaagttttagagtccaccatagaaaacaccattggaaaaaatccacatctctcgtctttagagtcaa |
595 |
Q |
| |
|
||||||||||| |||| ||| | |||||| ||||||||||||| ||||||| |||||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
13188 |
gtgtgtgtttctgatgatttcagtatgatgaaggttttagagtccatcatagaagacaccattggaaaaaatccaaatctctcctctttagagtcaa |
13092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0256 (Bit Score: 352; Significance: 0; HSPs: 1)
Name: scaffold0256
Description:
Target: scaffold0256; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 7 - 502
Target Start/End: Complemental strand, 9983 - 9488
Alignment:
| Q |
7 |
agaagcaaataacaaacgatgctgtcaaagagtggctacagcaactgcgtgatgctgcttatgtgcttgatgatatattggatgaatgttcaataacctt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9983 |
agaagcaaataacaaacgatgctgtcaaagagtggctacagcaactgcgtgatgctgcttatgtgcttgatgatatattggatgaatgttcaataacctt |
9884 |
T |
|
| Q |
107 |
aaaagcacatggcgacaacaagcggatcactcgtttccatcctatgaagattttggctcgtcgcaacattgggaagaggatgaaggaggttgctaaaaag |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| || |
|
|
| T |
9883 |
aaaagcacatggcgacaacaagcggatcactcgtttccatcctatgaagattttggctcgtcgcaacattggaaagaggatgaaggagattgctaaagag |
9784 |
T |
|
| Q |
207 |
attcatgatattgctgaagaaaggatgaagttcggattacatgtgggggtcatcgagcgccaaccagaagatgaagagtggcggcaaactacgtctgtca |
306 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| || ||| |
|
|
| T |
9783 |
attgatgatattgctgaagaaaggatgaagttcggattacaggtgggggtcatggagcaccaaccagaagatgaagagtggcggcaaactacctccttca |
9684 |
T |
|
| Q |
307 |
tcactgaatccaaagtatatggaagagacaaagataaagagcatattgtagagtttcttctaaggcatgctggtgacagtgaagaactctctgtctattc |
406 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||||||||||| | ||||| |||| |||||| ||||||||| | |||||||||| |||||||||||||| |
|
|
| T |
9683 |
tcactgaatccatagtatttggaagagacaaagataaagaaaaaattgttgagtatcttctgaggcatgctagcaacagtgaagatctctctgtctattc |
9584 |
T |
|
| Q |
407 |
cattgttggccacggtggatatggaaaaacaacacttgctcaaacagtcttcaatgatgaaagggtaaagacacattttgacttgaaaatatgggt |
502 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||| || | ||| || ||||| |||| || |||||||| |||||||||||||| |
|
|
| T |
9583 |
cattgttggcctaggtggatatggaaaaacaacacttgctcaattggtttacaacgaagaaagcgtaaccacccattttgatttgaaaatatgggt |
9488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 344; Significance: 0; HSPs: 15)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 7 - 502
Target Start/End: Complemental strand, 16781938 - 16781443
Alignment:
| Q |
7 |
agaagcaaataacaaacgatgctgtcaaagagtggctacagcaactgcgtgatgctgcttatgtgcttgatgatatattggatgaatgttcaataacctt |
106 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
16781938 |
agaagcaaataacaaatgatgctgtgaaagagtggttacagcaactgcgtgatgctgcttatgtgcttgatgatatattggacgaatgttcaataacctt |
16781839 |
T |
|
| Q |
107 |
aaaagcacatggcgacaacaagcggatcactcgtttccatcctatgaagattttggctcgtcgcaacattgggaagaggatgaaggaggttgctaaaaag |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| || |
|
|
| T |
16781838 |
aaaagcacatggcgacaacaagcggatcactcgtttccatcctatgaagattttggctcgtcgcaacattggaaagaggatgaaggagattgctaaagag |
16781739 |
T |
|
| Q |
207 |
attcatgatattgctgaagaaaggatgaagttcggattacatgtgggggtcatcgagcgccaaccagaagatgaagagtggcggcaaactacgtctgtca |
306 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||| || ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
16781738 |
atcgatgatattgctgaagaaaggatgaagttcggattgcaggtgggggtcatggagcaccaaccagaagatgaagagtggcggcaaactacctctgtca |
16781639 |
T |
|
| Q |
307 |
tcactgaatccaaagtatatggaagagacaaagataaagagcatattgtagagtttcttctaaggcatgctggtgacagtgaagaactctctgtctattc |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||| || ||||| |||| |||||| ||||||||| | | |||||||| |||||||||||||| |
|
|
| T |
16781638 |
tcactgaatccaaagtatatggaagagacagagataaagaacaaattgttgagtatcttctgaggcatgctagcaatagtgaagatctctctgtctattc |
16781539 |
T |
|
| Q |
407 |
cattgttggccacggtggatatggaaaaacaacacttgctcaaacagtcttcaatgatgaaagggtaaagacacattttgacttgaaaatatgggt |
502 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||| || | ||| |||||||| |||| || |||||||| |||||||||||||| |
|
|
| T |
16781538 |
cattgttggcctaggtggatatggaaaaacaacacttgctcaattggtatacaaggatgaaagcgtaaccacccattttgatttgaaaatatgggt |
16781443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 7 - 595
Target Start/End: Complemental strand, 16988284 - 16987697
Alignment:
| Q |
7 |
agaagcaaataacaaacgatgctgtcaaagagtggctacagcaactgcgtgatgctgcttatgtgcttgatgatatattggatgaatgttcaataacctt |
106 |
Q |
| |
|
||||||||||||||| | ||| ||| ||| | ||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||| |
|
|
| T |
16988284 |
agaagcaaataacaagcaatgttgtgaaacaatggctgcagaaactgtctgatgctgcttatgtacttgatgatatattggatgaatgctcaataacctc |
16988185 |
T |
|
| Q |
107 |
aaaagcacatggcgacaacaagcggatcactcgtttccatcctatgaagattttggctcgtcgcaacattgggaagaggatgaaggaggttgctaaaaag |
206 |
Q |
| |
|
|||||||||||| ||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
16988184 |
aaaagcacatggagacaaca---------ctagtttccatcctatgaagattttggctcatcgcaacattgggaagaggatgaagaaagttgctaaaaag |
16988094 |
T |
|
| Q |
207 |
attcatgatattgctgaagaaaggatgaagttcggatt---acatgtgggggtcatcgag---cgccaaccagaagatgaagagtggcggcaaactacgt |
300 |
Q |
| |
|
||| |||||||||||||||||||||| ||||| ||||| ||| ||||| ||||| ||| | |||| || |||||| || ||||| ||||||| | |
|
|
| T |
16988093 |
attgatgatattgctgaagaaaggatcaagtttggatttcaacaagtgggagtcatggaggagcatcaacgaggagatgatgaatggcgccaaactattt |
16987994 |
T |
|
| Q |
301 |
ctgtcatcactgaatccaaagtatatggaagagacaaagataaagagcatattgtagagtttcttctaaggcatgctggtgacagtgaagaactctctgt |
400 |
Q |
| |
|
|| ||||| ||| | ||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||| ||||||||||| |||||||||| |
|
|
| T |
16987993 |
ctactatcacagaaccgaaagtatatggaagagacaaagataaagaacagattgtagagtttcttctaagacatgctagtgacagtgaaaaactctctgt |
16987894 |
T |
|
| Q |
401 |
ctattccattgttggccacggtggatatggaaaaacaacacttgctcaaacagtcttcaatgatgaaagggtaaagacacattttgacttgaaaatatgg |
500 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
16987893 |
ctattccattgttggccacggtggatatggaaaaacagcacttgctcaaatggtcttcaatgatgaaagtgtaaagacacattttgacttgaaaatatgg |
16987794 |
T |
|
| Q |
501 |
gt--gtgtttctggtgatatcaattcgatgaaagttttagagtccaccatagaaaacaccattggaaaaaatccacatctctcgtctttagagtcaa |
595 |
Q |
| |
|
|| ||||||||| |||| ||| | |||||||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16987793 |
gtgtgtgtttctgatgatttcagtatgatgaaagttttagagtcgatcattgaaaacactattggaaaaaatccacatctctcgtctttagagtcaa |
16987697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 7 - 590
Target Start/End: Original strand, 16867330 - 16867916
Alignment:
| Q |
7 |
agaagcaaataacaaacgatgctgtcaaagagtggctacagcaactgcgtgatgctgcttatgtgcttgatgatatattggatgaatgttcaataacctt |
106 |
Q |
| |
|
|||||||||||||||||||| |||| | | ||||| || ||||| |||| ||||||||||| |||||||||||||||||||||||||||||||| | |
|
|
| T |
16867330 |
agaagcaaataacaaacgatcctgtgaggaactggctgcaaaaactgggtgacgctgcttatgtacttgatgatatattggatgaatgttcaataacttc |
16867429 |
T |
|
| Q |
107 |
aaaagcacatggcgacaacaagcggatcactcgtttccatcctatgaagattttggctcgtcgcaacattgggaagaggatgaaggaggttgctaaaaag |
206 |
Q |
| |
|
|||||| ||||| | ||||||| | |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |
|
|
| T |
16867430 |
aaaagcgcatggaggcaacaagtgcatcactagtttccatcctatgaagattttggctcgtcgcaacattggaaagaggatgaaggaggttgctaaaagg |
16867529 |
T |
|
| Q |
207 |
attcatgatattgctgaagaaaggatgaagttcggattacat---gtgggggtcatcgag---cgccaaccagaagatgaagagtggcggcaaactacgt |
300 |
Q |
| |
|
||| |||||||||||||||||||||| ||||| ||||| || ||||| |||| ||| | ||||| || |||||| || ||||| ||||||| | |
|
|
| T |
16867530 |
attgatgatattgctgaagaaaggatcaagtttggatttcaactagtgggagtcacagaggagcaccaacgaggagatgatgaatggcgccaaactattt |
16867629 |
T |
|
| Q |
301 |
ctgtcatcactgaatccaaagtatatggaagagacaaagataaagagcatattgtagagtttcttctaaggcatgctggtgacagtgaagaactctctgt |
400 |
Q |
| |
|
|| | | || ||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| | |||||||||||||||||||| |
|
|
| T |
16867630 |
ctattgttaccgaaccgaaagtatatggaagagacaaagataaagagcagattgtagagtttcttctaa---atgctagcgacagtgaagaactctctgt |
16867726 |
T |
|
| Q |
401 |
ctattccattgttggccacggtggatatggaaaaacaacacttgctcaaacagtcttcaatgatgaaagggtaaagacacattttgacttgaaaatatgg |
500 |
Q |
| |
|
|| |||||||||||| || ||| | |||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
16867727 |
ctgttccattgttggtgttggcggacaaggaaaaacaacactcgctcaagtggtcttcaatgatgaaagggtaaaaacacattttgacttgaaaatatgg |
16867826 |
T |
|
| Q |
501 |
gtgtgtttctggtgatatcaattcgatgaaagttttagagtccaccatagaaaacaccattggaaaaaatccacatctctcgtctttaga |
590 |
Q |
| |
|
||||||||| | ||| ||| || ||||||| |||||||||||| || ||||||||||||||||||||||| | |||||| ||||||||| |
|
|
| T |
16867827 |
gtgtgtttcggacgatttcagtttgatgaaaattttagagtccatcacagaaaacaccattggaaaaaatctagatctcttgtctttaga |
16867916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 7 - 593
Target Start/End: Complemental strand, 16838517 - 16837922
Alignment:
| Q |
7 |
agaagcaaataacaaacgatgctgtcaaagagtggctacagcaactgcgtgatgctgcttatgtgcttgatgatatattggatgaatgttcaataacctt |
106 |
Q |
| |
|
||||||| ||||||| | ||| ||| ||| | ||||| ||| || || |||||||||||||||| |||||||||||||||||||||||||||||||| | |
|
|
| T |
16838517 |
agaagcagataacaagcaatgttgtgaaacaatggctgcagaaattgggtgatgctgcttatgtacttgatgatatattggatgaatgttcaataacttc |
16838418 |
T |
|
| Q |
107 |
aaaagcacatggcgacaacaagcggatcactcgtttccatcctatgaagattttggctcgtcgcaacattgggaagaggatgaaggaggttgctaaaaag |
206 |
Q |
| |
|
||||||||||| | ||||||| | ||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |
|
|
| T |
16838417 |
aaaagcacatgaaggcaacaagtgcatcacccgtttccatccaatgaagattttggctcgtcgcaacattggaaagaggatgaaggaggttgctaaaagg |
16838318 |
T |
|
| Q |
207 |
attcatgatattgctgaagaaaggatgaagttcggattacat---gtgggggtcatcgag---cgccaaccagaagatgaagagtggcggcaaactacgt |
300 |
Q |
| |
|
||| ||||||||||||||||||||| ||||| ||||| || ||||| |||| ||| | ||||| || |||||| || ||| | |||||| | |
|
|
| T |
16838317 |
attgatgatattgctgaagaaaggaaaaagtttggatttcaatcagtgggagtcacggaggagcaccaacgaggagatgatgaatggatcctaactactt |
16838218 |
T |
|
| Q |
301 |
ctgtcatcactgaatccaaagtatatggaagagacaaagataaagagcatattgtagagtttcttctaaggcatgctggtgacagtgaagaactctctgt |
400 |
Q |
| |
|
||| |||| ||| | |||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||| || ||||||||||||||||||| |
|
|
| T |
16838217 |
ctgctgtcaccgaaccaaaagtatatggaagagacaaagataaagagcagattgtagagtttcttatagggcatgctagtaacagtgaagaactctctgt |
16838118 |
T |
|
| Q |
401 |
ctattccattgttggccacggtggatatggaaaaacaacacttgctcaaacagtcttcaatgatgaaagggtaaagacacattttgacttgaaaatatgg |
500 |
Q |
| |
|
||||||||||||||| || ||| | |||||||||||||| |||||| |||| |||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
16838117 |
ctattccattgttggtgttggcggacaaggaaaaacaacactcgctcaagtggtctacaatgatgaaagggtaaaaacacattttgacttgaaaatatgg |
16838018 |
T |
|
| Q |
501 |
--gtgtgtttctggtgatatcaattcgatgaaagttttagagtccaccatagaaaacaccattgg-aaaaaatccacatctctcgtctttagagtc |
593 |
Q |
| |
|
||||||||| | |||| ||| || ||||||| |||||||||||| |||||||||||||||||| |||||||| | |||||| |||||||||||| |
|
|
| T |
16838017 |
gtgtgtgtttcggatgatttcagtttgatgaaaattttagagtccatcatagaaaacaccattggaaaaaaatctagatctcttgtctttagagtc |
16837922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 7 - 595
Target Start/End: Complemental strand, 16658845 - 16658252
Alignment:
| Q |
7 |
agaagcaaataacaaacgatgctgtcaaagagtggctacagcaactgcgtgatgctgcttatgtgcttgatgatatattggatgaatgttcaataacctt |
106 |
Q |
| |
|
|||||||||||||||||||| ||| | | ||||| || ||||| |||| ||||||||||| |||||||||||||||||||||||||||||||| | |
|
|
| T |
16658845 |
agaagcaaataacaaacgatcttgtgaggaactggctgcaaaaactgggtgacgctgcttatgtacttgatgatatattggatgaatgttcaataacttc |
16658746 |
T |
|
| Q |
107 |
aaaagcacatggcgacaacaagcggatcactcgtttccatcctatgaagattttggctcgtcgcaacattgggaagaggatgaaggaggttgctaaaaag |
206 |
Q |
| |
|
|||||||||||| | ||||||| | |||||| |||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| | |
|
|
| T |
16658745 |
aaaagcacatggaggcaacaagtgcatcactagttttcatcctatgaagattttggctcgtcgtaacattggaaagaggatgaaggaggttgctaaaagg |
16658646 |
T |
|
| Q |
207 |
attcatgatattgctgaagaaaggatgaagttcggattacat---gtgggggtcatcgag---cgccaaccagaagatgaagagtggcggcaaactacgt |
300 |
Q |
| |
|
||| |||||||||||||||||||||| ||||| ||||| || ||||| |||| ||| | |||| || |||||| || ||||| ||||||| | |
|
|
| T |
16658645 |
attgatgatattgctgaagaaaggatcaagtttggatttcaactggtgggagtcacagaggagcagcaacgaggagatgatgaatggcgccaaactattt |
16658546 |
T |
|
| Q |
301 |
ctgtcatcactgaatccaaagtatatggaagagacaaagataaagagcatattgtagagtttcttctaaggcatgctggtgacagtgaagaactctctgt |
400 |
Q |
| |
|
|| |||| ||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| | |||||||||||||||||||| |
|
|
| T |
16658545 |
ctactgtcaccgaaccgaaagtatatggaagagacaaagataaagagcagattgtagagtttcttctaa---atgctagcgacagtgaagaactctctgt |
16658449 |
T |
|
| Q |
401 |
ctattccattgttggccacggtggatatggaaaaacaacacttgctcaaacagtcttcaatgatgaaagggtaaagacacattttgacttgaaaatatgg |
500 |
Q |
| |
|
|| |||||||||||| || ||| | |||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
16658448 |
ctgttccattgttggtgttggcggacaaggaaaaacaacactcgctcaaatggtcttcaatgatgaaagggtaaaaacacattttgacttgaaaatatgg |
16658349 |
T |
|
| Q |
501 |
gtgtgt--ttctggtgatatcaattcgatgaaagttttagagtccaccatagaaaacaccattggaaaaaatccacatctctcgtctttagagtcaa |
595 |
Q |
| |
|
|||||| ||| | |||| ||| || ||||| |||||||||||| |||||||||||||||||||||||| | | |||||| |||||||||||||| |
|
|
| T |
16658348 |
gtgtgtgtttcggatgatttcagtttactgaaaattttagagtccatcatagaaaacaccattggaaaaaacctagatctcttgtctttagagtcaa |
16658252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 7 - 595
Target Start/End: Complemental strand, 17070342 - 17069749
Alignment:
| Q |
7 |
agaagcaaataacaaacgatgctgtcaaagagtggctacagcaactgcgtgatgctgcttatgtgcttgatgatatattggatgaatgttcaataacctt |
106 |
Q |
| |
|
||||||| ||||||| ||||| ||| ||| | ||||| ||| || || |||||||||||||||| |||||||||||||||||||||||||||||||| | |
|
|
| T |
17070342 |
agaagcagataacaagcgatgttgtgaaacaatggctgcagaaattgggtgatgctgcttatgtacttgatgatatattggatgaatgttcaataacttc |
17070243 |
T |
|
| Q |
107 |
aaaagcacatggcgacaacaagcggatcactcgtttccatcctatgaagattttggctcgtcgcaacattgggaagaggatgaaggaggttgctaaaaag |
206 |
Q |
| |
|
||||||||||| | ||||||| | ||||| ||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||| | |
|
|
| T |
17070242 |
aaaagcacatgaaggcaacaagtgcatcacccgtttccatccaatgaagattttggctcatcgcaacattggaaagaggatgaaggaggttgctaaaagg |
17070143 |
T |
|
| Q |
207 |
attcatgatattgctgaagaaaggatgaagttcggattacat---gtgggggtcatcgag---cgccaaccagaagatgaagagtggcggcaaactacgt |
300 |
Q |
| |
|
||| | ||||||||| |||||||||| ||| ||||| || ||||| |||| ||| | ||||| || |||||| || | ||||||| | |
|
|
| T |
17070142 |
attgacgatattgctaaagaaaggatcgagtatggatttcaaccggtgggagtcacggaggagcaccaacgaggagatgatgaacagatccaaactattt |
17070043 |
T |
|
| Q |
301 |
ctgtcatcactgaatccaaagtatatggaagagacaaagataaagagcatattgtagagtttcttctaaggcatgctggtgacagtgaagaactctctgt |
400 |
Q |
| |
|
||| ||||| ||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
17070042 |
ctgctatcaccgaaccgaaagtatatggaagagacaaagataaagagcagattgtagagtttcttctaa---atgctagtgacagtgaagaactctctgt |
17069946 |
T |
|
| Q |
401 |
ctattccattgttggccacggtggatatggaaaaacaacacttgctcaaacagtcttcaatgatgaaagggtaaagacacattttgacttgaaaatatgg |
500 |
Q |
| |
|
||||||||||||||| || ||| | |||||||||||||| ||||||| |||| |||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
17069945 |
ctattccattgttggtgttggcggacaaggaaaaacaacactcgctcaaatggtctacaatgatgaaagggtaaaaacacattttgacttgaaaatatgg |
17069846 |
T |
|
| Q |
501 |
gt--gtgtttctggtgatatcaattcgatgaaagttttagagtccaccatagaaaacaccattggaaaaaatccacatctctcgtctttagagtcaa |
595 |
Q |
| |
|
|| ||||||| | |||| ||| || ||||||| |||||||||||| |||||||||||||||||||||||||| | |||||| |||||||||||||| |
|
|
| T |
17069845 |
gtgtgtgtttcggatgatttcagtttgatgaaaattttagagtccatcatagaaaacaccattggaaaaaatctagatctcttgtctttagagtcaa |
17069749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 7 - 593
Target Start/End: Complemental strand, 16798005 - 16797411
Alignment:
| Q |
7 |
agaagcaaataacaaacgatgctgtcaaagagtggctacagcaactgcgtgatgctgcttatgtgcttgatgatatattggatgaatgttcaataacctt |
106 |
Q |
| |
|
||||||| ||||||| ||||| ||| || | ||||| ||| || || |||||||||||||||| |||||||||||||||||||||||||||||||| | |
|
|
| T |
16798005 |
agaagcagataacaagcgatgttgtgcaaaaatggctgcagaaattgggtgatgctgcttatgtacttgatgatatattggatgaatgttcaataacttc |
16797906 |
T |
|
| Q |
107 |
aaaagcacatggcgacaacaagcggatcactcgtttccatcctatgaagattttggctcgtcgcaacattgggaagaggatgaaggaggttgctaaaaag |
206 |
Q |
| |
|
||||||||||| | ||||||| | ||||| ||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| | |
|
|
| T |
16797905 |
aaaagcacatgaaggcaacaagtgcatcacccgttttcatccaatgaaaattttggctcgtcgcaacattggaaagaggatgaaggaggttgctaaaagg |
16797806 |
T |
|
| Q |
207 |
attcatgatattgctgaagaaaggatgaagttcggattacat---gtgggggtcatcgag---cgccaaccagaagatgaagagtggcggcaaactacgt |
300 |
Q |
| |
|
||| ||||||||||||||||||||| ||||| ||||| || ||||| |||| ||| | ||||| || |||||| || ||| | |||||| | |
|
|
| T |
16797805 |
attgatgatattgctgaagaaaggaaaaagtttggatttcaatcagtgggagtcacggaggagcaccaacgaggagatgatgaatggatcctaactactt |
16797706 |
T |
|
| Q |
301 |
ctgtcatcactgaatccaaagtatatggaagagacaaagataaagagcatattgtagagtttcttctaaggcatgctggtgacagtgaagaactctctgt |
400 |
Q |
| |
|
||| |||| ||| | ||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||| || |||||||||||||||||| |
|
|
| T |
16797705 |
ctgctgtcaccgaaccaaaagtatatggaagagacaaagataaagaacagattgtagagtttcttctagggcatgctagtaccagtgaagaactctctgt |
16797606 |
T |
|
| Q |
401 |
ctattccattgttggccacggtggatatggaaaaacaacacttgctcaaacagtcttcaatgatgaaagggtaaagacacattttgacttgaaaatatgg |
500 |
Q |
| |
|
||||||||||||||| || ||| | |||||||||||||| |||||| |||| |||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
16797605 |
ctattccattgttggtgttggcggacaaggaaaaacaacactcgctcaagtggtctacaatgatgaaagggtaaaaacacattttgacttgaaaatatgg |
16797506 |
T |
|
| Q |
501 |
--gtgtgtttctggtgatatcaattcgatgaaagttttagagtccaccatagaaaacaccattggaaaaaatccacatctctcgtctttagagtc |
593 |
Q |
| |
|
||||||||| | |||| ||| || ||||||| |||||||||| | |||||||||||||||||||||||||| | | |||| |||||||||||| |
|
|
| T |
16797505 |
gtgtgtgtttcggatgatttcagtttgatgaaaattttagagtctatcatagaaaacaccattggaaaaaatctagaactcttgtctttagagtc |
16797411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 7 - 595
Target Start/End: Original strand, 18872509 - 18873102
Alignment:
| Q |
7 |
agaagcaaataacaaacgatgctgtcaaagagtggctacagcaactgcgtgatgctgcttatgtgcttgatgatatattggatgaatgttcaataacctt |
106 |
Q |
| |
|
|||||||| |||||| | || ||| ||||| ||||| ||| | ||| ||||| ||| ||||| |||||||||||||||||||| ||| ||||||| | |
|
|
| T |
18872509 |
agaagcaactaacaagccgtgttgtgaaagattggctgcagaagctgactgatgttgcctatgttcttgatgatatattggatgattgtacaataacatc |
18872608 |
T |
|
| Q |
107 |
aaaagcacatggcgacaacaagcggatcactcgtttccatcctatgaagattttggctcgtcgcaacattgggaagaggatgaaggaggttgctaaaaag |
206 |
Q |
| |
|
|||||||||||| ||||||||| ||||||| ||||||||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||||| |
|
|
| T |
18872609 |
aaaagcacatggagacaacaagtggatcacccgtttccatcctaagaagattttggctcgtcgggatattggaaagaggatgaaggaggttgctaaaaag |
18872708 |
T |
|
| Q |
207 |
attcatgatattgctgaagaaaggatgaagttcggattacatgtgggggtcatcgag---cgccaaccagaagatgaagagtggcggcaaactacgtctg |
303 |
Q |
| |
|
||| ||| |||||||||||||||||| ||||| |||||||| | || ||||| ||| ||||||| || |||||| | ||||| |||||| |||| |
|
|
| T |
18872709 |
attgatgttattgctgaagaaaggatcaagtttggattacaagcggtagtcatggaggatcgccaacgaggagatgataaatggcgccaaactttttctg |
18872808 |
T |
|
| Q |
304 |
tcatcactgaatccaaagtatatggaagagacaaagataaagagcatattgtagagtttcttctaaggcatgctggtgacagtgaagaactctctgtcta |
403 |
Q |
| |
|
||||||||||| | ||||||||||||||||| || | |||||| |||| |||||||||||||| ||||||| || |||||||||||||||||||| |
|
|
| T |
18872809 |
tcatcactgaaccgaaagtatatggaagagatcgtgacagagagcaagttgttgagtttcttctaagtcatgctgtcgatagtgaagaactctctgtcta |
18872908 |
T |
|
| Q |
404 |
ttccattgttggccacggtggatatggaaaaacaacacttgctcaaacagtcttcaatgatgaaagggtaaagacacattttgacttgaaaatatgggtg |
503 |
Q |
| |
|
|||||||||||| ||||| | ||||||||||||||||||||| ||||||||||||||||||||| | ||||| ||| ||||||||||||||||| |
|
|
| T |
18872909 |
ttccattgttggtgttggtgggcaaggaaaaacaacacttgctcaagtggtcttcaatgatgaaagggtagatacacactttaacttgaaaatatgggtg |
18873008 |
T |
|
| Q |
504 |
tgt--ttctggtgatatcaattcgatgaaagttttagagtccaccatagaaaacaccattggaaaaaatccacatctctcgtctttagagtcaa |
595 |
Q |
| |
|
||| ||||| ||| | | | |||||||||||| |||||| ||||||| |||| ||||||||||||| |||||||||||||||| |||| |
|
|
| T |
18873009 |
tgtgtttctgaggattttagtatgatgaaagttttgcagtccatcatagaatccaccgatggaaaaaatccagatctctcgtctttagaatcaa |
18873102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 81 - 595
Target Start/End: Original strand, 18805589 - 18806108
Alignment:
| Q |
81 |
atattggatgaatgttcaataaccttaaaagcacatggcgacaacaagcggatcactcgtttccatcctatgaagattttggctcgtcgcaacattggga |
180 |
Q |
| |
|
||||||||||| ||| ||||||| | |||||||||||| ||||||||| ||||||| ||||||||||||| |||||||||||||||||| | ||||| | |
|
|
| T |
18805589 |
atattggatgattgtacaataacatcaaaagcacatggagacaacaagtggatcacccgtttccatcctaagaagattttggctcgtcgggatattggaa |
18805688 |
T |
|
| Q |
181 |
agaggatgaaggaggttgctaaaaagattcatgatattgctgaagaaaggatgaagttcggattacatgtgggggtcatcgag---cgccaaccagaaga |
277 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||| ||||| || | || ||||| ||| ||||||| || ||| |
|
|
| T |
18805689 |
agaggatgaaggaggttgctaaaaagattgatgttattgctgaagaaaggatcaagtttggattgcaagcggtagtcatggaggatcgccaacgaggaga |
18805788 |
T |
|
| Q |
278 |
tgaagagtggcggcaaactacgtctgtcatcactgaatccaaagtatatggaagagacaaagataaagagcatattgtagagtttcttctaaggcatgct |
377 |
Q |
| |
|
||| | ||||| ||||||| || |||||||||||| | ||||||||||||||||| || | |||||| |||| |||||||||||||| |||||| |
|
|
| T |
18805789 |
tgataaatggcgccaaactaattcagtcatcactgaaccgaaagtatatggaagagatcgtgacagagagcaagttgttgagtttcttctaagtcatgct |
18805888 |
T |
|
| Q |
378 |
ggtgacagtgaagaactctctgtctattccattgttggccacggtggatatggaaaaacaacacttgctcaaacagtcttcaatgatgaaagggtaaaga |
477 |
Q |
| |
|
| || |||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||| || |||||||||||||||||| | | |
|
|
| T |
18805889 |
gtcgatagtgaagaactctctgtctattccattgttggtgttggtgggcaaggaaaaacaacacttgctcaagtggtattcaatgatgaaagggtagata |
18805988 |
T |
|
| Q |
478 |
cacattttgacttgaaaatatgg--gtgtgtttctggtgatatcaattcgatgaaagttttagagtccaccatagaaaacaccattggaaaaaatccaca |
575 |
Q |
| |
|
|||| ||| |||||||||||||| ||||||||||| ||| | | | |||||||||||| |||||| ||||||| | || ||||||||| |||| | |
|
|
| T |
18805989 |
cacactttaacttgaaaatatgggtgtgtgtttctgaggattttagtatgatgaaagttttgcagtccatcatagaatccgccgttggaaaaagtccaga |
18806088 |
T |
|
| Q |
576 |
tctctcgtctttagagtcaa |
595 |
Q |
| |
|
||||||||||||||| |||| |
|
|
| T |
18806089 |
tctctcgtctttagaatcaa |
18806108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 56 - 595
Target Start/End: Complemental strand, 16788752 - 16788209
Alignment:
| Q |
56 |
tgatgctgcttatgtgcttgatgatatattggatgaatgttcaataaccttaaaagcacatggcgacaacaagcggatcactcgtttccatcctatgaag |
155 |
Q |
| |
|
|||||||||| |||| ||||||||| ||||||| |||||||||||||| | |||||||||||| ||||||||| | ||||| ||||||| ||||| |||| |
|
|
| T |
16788752 |
tgatgctgctcatgttcttgatgatttattggacgaatgttcaataacatcaaaagcacatggagacaacaagtgcatcacccgtttccttcctaagaag |
16788653 |
T |
|
| Q |
156 |
attttggctcgtcgcaacattgggaagaggatgaaggaggttgctaaaaagattcatgatattgctgaagaaaggatgaagttcggattacatgtggggg |
255 |
Q |
| |
|
|||||||||| || || |||| ||||||||||||| |||||||||||||||| | | ||||||| |||| |||||||||| ||||| || ||||| | |
|
|
| T |
16788652 |
attttggctcagcgtgacgttggaaagaggatgaaggcggttgctaaaaagattgacgttattgctaaagacaggatgaagtatggattgcaagtgggag |
16788553 |
T |
|
| Q |
256 |
tca---tcgagcgccaaccagaagatgaagagtggcggcaaactacgtctgtcatcactgaatccaaagtatatggaagagacaaagataaagagcatat |
352 |
Q |
| |
|
| | ||||| |||| || | ||| |||||||| |||||||| |||||| |||| ||| | |||||||||||| ||| | |||||||||| || |
|
|
| T |
16788552 |
taacagaagagcgtcaacgaggtgctgatgagtggcgccaaactacttctgtcgtcaccgaacctgtagtatatggaaggtacatatataaagagcagat |
16788453 |
T |
|
| Q |
353 |
tgtagagtttcttctaaggcatgctggtgacagtgaagaactctctgtctattccattgttggccacggtggatatggaaaaacaacacttgctcaaaca |
452 |
Q |
| |
|
|||| |||||| ||||| |||| || ||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| | |
|
|
| T |
16788452 |
tgtaaagtttcctctaaagcatactactgacaaagaagaactctctgtctattccattgttggcctaggtgaatatggaaaaacaacacttgctcaatta |
16788353 |
T |
|
| Q |
453 |
gtcttcaatgatgaaagggtaaagacacattttgacttgaaaatatgg--gtgtgtttctggtgatatcaattcgatgaaagttttagagtccaccatag |
550 |
Q |
| |
|
|| | ||| ||||||| |||| | ||||||||| ||||||||||| | |||||| | |||| ||| |||||| ||||||||| || ||||| |
|
|
| T |
16788352 |
gtatacaacaatgaaagagtaagaaaccattttgacctgaaaatatggatttttgtttcagatgatttcagcatgatgaaggttttagag-ccgtcatag |
16788254 |
T |
|
| Q |
551 |
aaaacaccattggaaaaaatccacatctctcgtctttagagtcaa |
595 |
Q |
| |
|
|| |||| ||||||||||||||| ||||||| ||||| ||||||| |
|
|
| T |
16788253 |
aagacacaattggaaaaaatccagatctctcatctttggagtcaa |
16788209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 7 - 446
Target Start/End: Original strand, 18870032 - 18870474
Alignment:
| Q |
7 |
agaagcaaataacaaacgatgctgtcaaagagtggctacagcaactgcgtgatgctgcttatgtgcttgatgatatattggatgaatgttcaataacctt |
106 |
Q |
| |
|
||||||||||||| | | || ||| ||||| ||||| ||| | ||| ||||| ||||||||| |||||||||||||||||||| ||| |||||| | |
|
|
| T |
18870032 |
agaagcaaataacgagccgtgttgtgaaagattggctgcagaagctgactgatgttgcttatgttcttgatgatatattggatgattgtacaataaaatc |
18870131 |
T |
|
| Q |
107 |
aaaagcacatggcgacaacaagcggatcactcgtttccatcctatgaagattttggctcgtcgcaacattgggaagaggatgaaggaggttgctaaaaag |
206 |
Q |
| |
|
|||||||||||| ||||||||| ||||||| |||||||||||| || ||||||||||||| | | ||||| ||||||||||||||||||||||||||| |
|
|
| T |
18870132 |
aaaagcacatggagacaacaagtggatcaccagtttccatcctaagatgattttggctcgtagggatattggaaagaggatgaaggaggttgctaaaaag |
18870231 |
T |
|
| Q |
207 |
attcatgatattgctgaagaaaggatgaagttcggattacatgtgggggtcatcgag---cgccaaccagaagatgaagagtggcggcaaactacgtctg |
303 |
Q |
| |
|
||| ||| |||||||||||||||||| || || |||||||| |||| ||||| ||| ||||||| || || ||| || || |||||||| |||| |
|
|
| T |
18870232 |
attgatgttattgctgaagaaaggatcaaattaggattacaagtggtagtcatggaggatcgccaacgaggagttgatgaaaatcgccaaactacttctg |
18870331 |
T |
|
| Q |
304 |
tcatcactgaatccaaagtatatggaagagacaaagataaagagcatattgtagagtttcttctaaggcatgctggtgacagtgaagaactctctgtcta |
403 |
Q |
| |
|
|| |||||||| | ||||| ||||||||||| |||| |||| | || | |||||||| ||||| |||||| ||||||||||||||||||| |||| |
|
|
| T |
18870332 |
tcgtcactgaaccaaaagtttatggaagagatcgtgatagagagaaagtttttgagtttctgctaagtcatgctcttgacagtgaagaactctctttcta |
18870431 |
T |
|
| Q |
404 |
ttccattgttggccacggtggatatggaaaaacaacacttgct |
446 |
Q |
| |
|
|||||||||||| ||||| | |||||||||||||||||| |
|
|
| T |
18870432 |
ttccattgttggtgttggtgggcaaggaaaaacaacacttgct |
18870474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 7 - 331
Target Start/End: Original strand, 18793946 - 18794273
Alignment:
| Q |
7 |
agaagcaaataacaaacgatgctgtcaaagagtggctacagcaactgcgtgatgctgcttatgtgcttgatgatatattggatgaatgttcaataacctt |
106 |
Q |
| |
|
||||||||||||||| | || ||| ||||| ||||| ||| | || ||||| ||| ||||| |||||||||||||||||||| ||| ||||||| | |
|
|
| T |
18793946 |
agaagcaaataacaagccgtgttgtgaaagattggctgcagaagctaactgatgttgcctatgttcttgatgatatattggatgattgtacaataacatc |
18794045 |
T |
|
| Q |
107 |
aaaagcacatggcgacaacaagcggatcactcgtttccatcctatgaagattttggctcgtcgcaacattgggaagaggatgaaggaggttgctaaaaag |
206 |
Q |
| |
|
|||||||||||| ||||||||| ||||||| ||||| ||||||| |||||||||||||||| | || ||||| ||||||||||||||||||||||||||| |
|
|
| T |
18794046 |
aaaagcacatggagacaacaagtggatcacccgtttacatcctaagaagattttggctcgtaggaatattggaaagaggatgaaggaggttgctaaaaag |
18794145 |
T |
|
| Q |
207 |
attcatgatattgctgaagaaaggatgaagttcggattacatgtgggggtcatcgag---cgccaaccagaagatgaagagtggcggcaaactacgtctg |
303 |
Q |
| |
|
||| ||| |||||||||||||||||| ||||| ||||| || | || ||||| ||| ||||||| || |||||| || ||||| |||||||| || | |
|
|
| T |
18794146 |
attgatgttattgctgaagaaaggatcaagtttggattgcaagcggtagtcatggaggatcgccaacgaggagatgatgaatggcgccaaactacttcag |
18794245 |
T |
|
| Q |
304 |
tcatcactgaatccaaagtatatggaag |
331 |
Q |
| |
|
|| |||||||| | |||||||||||||| |
|
|
| T |
18794246 |
tcgtcactgaaccgaaagtatatggaag |
18794273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 7 - 232
Target Start/End: Original strand, 18587027 - 18587252
Alignment:
| Q |
7 |
agaagcaaataacaaacgatgctgtcaaagagtggctacagcaactgcgtgatgctgcttatgtgcttgatgatatattggatgaatgttcaataacctt |
106 |
Q |
| |
|
||||||||||||||| | || ||| ||||| ||||| ||| | ||| ||||| ||||||||| ||||| |||||||||||||| ||| |||||| | |
|
|
| T |
18587027 |
agaagcaaataacaagccgtgttgtgaaagattggctgcagaagctgactgatgttgcttatgttcttgacgatatattggatgattgtacaataaaatc |
18587126 |
T |
|
| Q |
107 |
aaaagcacatggcgacaacaagcggatcactcgtttccatcctatgaagattttggctcgtcgcaacattgggaagaggatgaaggaggttgctaaaaag |
206 |
Q |
| |
|
|||||||||||| ||||||||| ||||||| ||||||||||||| || ||||||||||||| | | ||||| ||||||||||||||||||||||||||| |
|
|
| T |
18587127 |
aaaagcacatggagacaacaagtggatcacccgtttccatcctaagatgattttggctcgtagggatattggaaagaggatgaaggaggttgctaaaaag |
18587226 |
T |
|
| Q |
207 |
attcatgatattgctgaagaaaggat |
232 |
Q |
| |
|
||| ||| |||||||||||||||||| |
|
|
| T |
18587227 |
attgatgttattgctgaagaaaggat |
18587252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 352 - 516
Target Start/End: Complemental strand, 16844321 - 16844155
Alignment:
| Q |
352 |
ttgtagagtttcttctaaggcatgctggtgacagtgaagaactctctgtctattccattgttggccacggtggatatggaaaaacaacacttgctcaaac |
451 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| || |||||||||||||| ||| ||||||||||| |
|
|
| T |
16844321 |
ttgttgagtttcttctaaggcatgctattgacaaggaaggactctctgtctattccattgttggtcatggtggatatggaaagacagcacttgctcaact |
16844222 |
T |
|
| Q |
452 |
agtcttcaatgatgaaagggtaaagacacattttgacttgaaaatatggg--tgtgtttctggtgat |
516 |
Q |
| |
|
|||||||||||||| |||||||| || |||||| ||||||||||||| |||||||||| |||| |
|
|
| T |
16844221 |
ggtcttcaatgatgagagggtaaatactcattttcctttgaaaatatgggtttgtgtttctgatgat |
16844155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 16844500 - 16844426
Alignment:
| Q |
173 |
cattgggaagaggatgaaggaggttgctaaaaagattcatgatattgctgaagaaaggatgaagttcggattaca |
247 |
Q |
| |
|
|||||| |||| |||||| ||||| ||| |||||||| ||| ||||||||||||||| || ||||| |||||||| |
|
|
| T |
16844500 |
cattggaaagaagatgaaagaggtagctgaaaagattgatgctattgctgaagaaagaatcaagtttggattaca |
16844426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 316; Significance: 1e-178; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 7 - 502
Target Start/End: Original strand, 38938681 - 38939176
Alignment:
| Q |
7 |
agaagcaaataacaaacgatgctgtcaaagagtggctacagcaactgcgtgatgctgcttatgtgcttgatgatatattggatgaatgttcaataacctt |
106 |
Q |
| |
|
|||||||||| |||| | ||| ||| ||||| ||||| ||| || ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
38938681 |
agaagcaaattacaagccatgttgtgaaagactggctgcagaaattgcgtgatgttgcttatgtacttgatgatatattggatgaatgttcaataacctt |
38938780 |
T |
|
| Q |
107 |
aaaagcacatggcgacaacaagcggatcactcgtttccatcctatgaagattttggctcgtcgcaacattgggaagaggatgaaggaggttgctaaaaag |
206 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
38938781 |
aaaagcacatggcgacaacaagtggatcactcgtttccatcctctgaagattttggctcgtcgcaacattggaaagaggatgaaggaggttgctaaaaag |
38938880 |
T |
|
| Q |
207 |
attcatgatattgctgaagaaaggatgaagttcggattacatgtgggggtcatcgagcgccaaccagaagatgaagagtggcggcaaactacgtctgtca |
306 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
38938881 |
atcgatgatattgctgaagaaaggatgaagttcggattacaagtgggggtcatggagcgccaaccagaagatgaagagtggcggaaaactacctctgtca |
38938980 |
T |
|
| Q |
307 |
tcactgaatccaaagtatatggaagagacaaagataaagagcatattgtagagtttcttctaaggcatgctggtgacagtgaagaactctctgtctattc |
406 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||| || ||||| |||| |||||| ||||||||| |||||||||| |||||||||||||| |
|
|
| T |
38938981 |
tcactgaatccgaagtatatggaagagacaaagataaagaacaaattgttgagtatcttctgaggcatgctaacaacagtgaagatctctctgtctattc |
38939080 |
T |
|
| Q |
407 |
cattgttggccacggtggatatggaaaaacaacacttgctcaaacagtcttcaatgatgaaagggtaaagacacattttgacttgaaaatatgggt |
502 |
Q |
| |
|
||||||||| | |||||||||||||||||||||||||||||| |||| ||| ||||||| |||| || |||||||| |||||||||||||| |
|
|
| T |
38939081 |
cattgttggtctaggtggatatggaaaaacaacacttgctcaattggtctacaacaatgaaagcgtaaccacccattttgatttgaaaatatgggt |
38939176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 8 - 502
Target Start/End: Original strand, 7052586 - 7053083
Alignment:
| Q |
8 |
gaagcaaataacaaacgatgctgtcaaagagtggctacagcaactgcgtgatgctgcttatgtgcttgatgatatattggatgaatgttcaataacctta |
107 |
Q |
| |
|
||||||||| |||| | ||||||| ||||| ||||| ||| | ||| |||||||||| |||| ||||||||||||||||| |||||||||||||| | | |
|
|
| T |
7052586 |
gaagcaaattacaagccatgctgtaaaagattggctgcagaagctggctgatgctgctcatgttcttgatgatatattggacgaatgttcaataacatca |
7052685 |
T |
|
| Q |
108 |
aaagcacatggcgacaacaagcggatcactcgtttccatcctatgaagattttggctcgtcgcaacattgggaagaggatgaaggaggttgctaaaaaga |
207 |
Q |
| |
|
||| | ||| ||||||||| ||||||| ||||||||||||| ||||||||||||||| || ||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
7052686 |
aaaccctgtggagacaacaagtggatcacccgtttccatcctaagaagattttggctcggcgtgacattggaaagaggatgaaagaggttgctaaaaaga |
7052785 |
T |
|
| Q |
208 |
ttcatgatattgctgaagaaaggatgaagttcggattacatgtgggggtcat---cgagcgccaaccagaagatgaagagtggcggcaaactacgtctgt |
304 |
Q |
| |
|
|| ||| |||||||||||||||||| ||||| |||||||| ||||| ||||| ||||| || | || |||||| || ||||| |||||||| ||||| |
|
|
| T |
7052786 |
ttgatgttattgctgaagaaaggatcaagtttggattacaagtgggagtcatagaggagcgtcagcgaggagatgatgaatggcgccaaactacttctgt |
7052885 |
T |
|
| Q |
305 |
catcactgaatccaaagtatatggaagagacaaagataaagagcatattgtagagtttcttctaaggcatgctggtgacagtgaagaactctctgtctat |
404 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||| | ||||| ||||||||||| ||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
7052886 |
catcactgaagttgtggtatatggaagagacaaagataaagagaagattgtcgagtttcttctgaggcatgctagtgacagtgaagaactctctatctat |
7052985 |
T |
|
| Q |
405 |
tccattgttggccacggtggatatggaaaaacaacacttgctcaaacagtcttcaatgatgaaagggtaaagacacattttgacttgaaaatatgggt |
502 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||| |||| || |||||||| |||| || ||||||||||||||||||||||| |
|
|
| T |
7052986 |
cccattgttggccacagtggatatggaaaaacaacacttgctcaattggtctataacgatgaaagtgtaagcacccattttgacttgaaaatatgggt |
7053083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0144 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: scaffold0144
Description:
Target: scaffold0144; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 9 - 595
Target Start/End: Complemental strand, 38321 - 37730
Alignment:
| Q |
9 |
aagcaaataacaaacgatgctgtcaaagagtggctacagcaactgcgtgatgctgcttatgtgcttgatgatatattggatgaatgttcaataaccttaa |
108 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38321 |
aagcaaataacaaacgatgccgtgaaagagtggctacagcaactcggtgattctgcttatgtacttgatgatatattggatgaatgttcaataaccttaa |
38222 |
T |
|
| Q |
109 |
aagcacatggcgacaacaagcggatcactcgtttccatcctatgaagattttggctcgtcgcaacattgggaagaggatgaaggaggttgctaaaaagat |
208 |
Q |
| |
|
|| |||| || ||| ||||| | |||||| ||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||| |
|
|
| T |
38221 |
aaccacacggagacgacaagtgcatcactagtttccatcctgtgaagattttggcttgtcgcaacattggaaagaggatgaaggaggttgctaaaaggat |
38122 |
T |
|
| Q |
209 |
tcatgatattgctgaagaaaggatgaagttcggatt---acatgtgggggtca---tcgagcgccaaccagaagatgaagagtggcggcaaactacgtct |
302 |
Q |
| |
|
| ||||||||||||||||||||| || || ||||| || ||||| |||| |||| |||| || |||||| || ||||| ||||||| ||| |
|
|
| T |
38121 |
tgatgatattgctgaagaaaggaacaaatttggatttcaacgagtgggagtcacggaggagcatcaacgaggagatgatgaatggcgccaaactatttct |
38022 |
T |
|
| Q |
303 |
gtcatcactgaatccaaagtatatggaagagacaaagataaagagcatattgtagagtttcttctaaggcatgctggtgacagtgaagaactctctgtct |
402 |
Q |
| |
|
|||| ||| | ||||||||||||||||||||||||||||| || ||||||||||||||||||| |||| | || ||||||||||||| ||||| |
|
|
| T |
38021 |
actgtcaccgaaccgaaagtatatggaagagacaaagataaagaacagattgtagagtttcttctaa---atgccagcgaaagtgaagaactctttgtct |
37925 |
T |
|
| Q |
403 |
attccattgttggccacggtggatatggaaaaacaacacttgctcaaacagtcttcaatgatgaaagggtaaagacacattttgacttgaaaatatgg-- |
500 |
Q |
| |
|
|||||||||||| || ||| | |||||||||||||| ||||||| |||| |||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
37924 |
gttccattgttggtgttggcggacaaggaaaaacaacactcgctcaaatggtctacaatgatgaaagggtaaaaacacattttgacttgaaaatatgggt |
37825 |
T |
|
| Q |
501 |
gtgtgtttctggtgatatcaattcgatgaaagttttagagtccaccatagaaaacaccattggaaaaaatccacatctctcgtctttagagtcaa |
595 |
Q |
| |
|
||||||||| | |||| ||| || ||||||| |||||||||||| |||||||||||||||||||||||| | | |||||| |||||||||||||| |
|
|
| T |
37824 |
gtgtgtttcggatgatttcagtttgatgaaaattttagagtccatcatagaaaacaccattggaaaaaacctagatctcttgtctttagagtcaa |
37730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0511 (Bit Score: 198; Significance: 1e-107; HSPs: 1)
Name: scaffold0511
Description:
Target: scaffold0511; HSP #1
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 7 - 595
Target Start/End: Complemental strand, 10195 - 9602
Alignment:
| Q |
7 |
agaagcaaataacaaacgatgctgtcaaagagtggctacagcaactgcgtgatgctgcttatgtgcttgatgatatattggatgaatgttcaataacctt |
106 |
Q |
| |
|
||||||||||||||| | || ||| ||||| ||||| ||| | || ||||| ||| ||||| |||||||||||||||||||| ||| ||||||| | |
|
|
| T |
10195 |
agaagcaaataacaagccgtgttgtgaaagattggctgcagaagctaactgatgttgcctatgttcttgatgatatattggatgattgtacaataacatc |
10096 |
T |
|
| Q |
107 |
aaaagcacatggcgacaacaagcggatcactcgtttccatcctatgaagattttggctcgtcgcaacattgggaagaggatgaaggaggttgctaaaaag |
206 |
Q |
| |
|
|||||||||||| ||||||||| ||||||| ||||| ||||||| |||||||||||||||| | | ||||| ||||||||||||||||||||||||||| |
|
|
| T |
10095 |
aaaagcacatggagacaacaagtggatcacccgttttcatcctaagaagattttggctcgttggcatattggaaagaggatgaaggaggttgctaaaaag |
9996 |
T |
|
| Q |
207 |
attcatgatattgctgaagaaaggatgaagttcggattacatgtgggggtcatcgag---cgccaaccagaagatgaagagtggcggcaaactacgtctg |
303 |
Q |
| |
|
||| ||| |||||||||||||||||| ||||| ||||| || | || ||||| ||| ||||||| || |||||| || ||||| |||||||| || | |
|
|
| T |
9995 |
attgatgttattgctgaagaaaggatcaagtttggattgcaagcggtagtcatggaggatcgccaacgaggagatgatgaatggcgccaaactacttcag |
9896 |
T |
|
| Q |
304 |
tcatcactgaatccaaagtatatggaagagacaaagataaagagcatattgtagagtttcttctaaggcatgctggtgacagtgaagaactctctgtcta |
403 |
Q |
| |
|
|| |||||||| | |||||||||||||||||| || | |||||| |||| |||||||||||||| |||| || || |||||||||||||| ||||| |
|
|
| T |
9895 |
tcgtcactgaaccgaaagtatatggaagagaccgtgacagagagcaagttgttgagtttcttctaagtcatgttgtggatagtgaagaactctcngtcta |
9796 |
T |
|
| Q |
404 |
ttccattgttggccacggtggatatggaaaaacaacacttgctcaaacagtcttcaatgatgaaagggtaaagacacattttgacttgaaaatatgggt- |
502 |
Q |
| |
|
|||||||||||| ||||| | ||||||||||||||||||||| || |||||||||||||||||| | ||||| ||| |||||||||||||||| |
|
|
| T |
9795 |
ttccattgttggtgttggtgggcaaggaaaaacaacacttgctcaagtggtgttcaatgatgaaagggtagatacacactttaacttgaaaatatgggtg |
9696 |
T |
|
| Q |
503 |
-gtgtttctggtgatatcaattcgatgaaagttttagagtccaccatagaaaacaccattggaaaaaatccacatctctcgtctttagagtcaa |
595 |
Q |
| |
|
||||||||| ||| | ||| |||||||||||| |||||| ||||||| |||| ||||||||||||| |||||||||||||||| |||| |
|
|
| T |
9695 |
tgtgtttctgaggattttaatatgatgaaagttttgcagtccatcatagaatccaccgatggaaaaaatccagatctctcgtctttagaatcaa |
9602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0230 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0230
Description:
Target: scaffold0230; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 7 - 595
Target Start/End: Complemental strand, 5515 - 4922
Alignment:
| Q |
7 |
agaagcaaataacaaacgatgctgtcaaagagtggctacagcaactgcgtgatgctgcttatgtgcttgatgatatattggatgaatgttcaataacctt |
106 |
Q |
| |
|
||||||||||||||| | || ||| ||||| ||||| ||| | ||| ||||| ||||||||| ||||| |||||||||||||| ||| |||||| | |
|
|
| T |
5515 |
agaagcaaataacaagccgtgttgtgaaagattggctgcagaagctgactgatgttgcttatgttcttgacgatatattggatgattgtacaataaaatc |
5416 |
T |
|
| Q |
107 |
aaaagcacatggcgacaacaagcggatcactcgtttccatcctatgaagattttggctcgtcgcaacattgggaagaggatgaaggaggttgctaaaaag |
206 |
Q |
| |
|
|||||||||||| ||||||||| ||||||| ||||||||||||| || ||||||||||||| | | ||||| ||||||||||||||||||||||||||| |
|
|
| T |
5415 |
aaaagcacatggagacaacaagtggatcacccgtttccatcctaagatgattttggctcgtagggatattggaaagaggatgaaggaggttgctaaaaag |
5316 |
T |
|
| Q |
207 |
attcatgatattgctgaagaaaggatgaagttcggattacatgtgggggtcat---cgagcgccaaccagaagatgaagagtggcggcaaactacgtctg |
303 |
Q |
| |
|
||| ||| |||||||||||||||||| ||||| |||||||| | || ||||| || ||||||| || |||||| | ||||| |||||| |||| |
|
|
| T |
5315 |
attgatgttattgctgaagaaaggatcaagtttggattacaagcggtagtcatggaagatcgccaacgaggagatgataaatggcgccaaactttttctg |
5216 |
T |
|
| Q |
304 |
tcatcactgaatccaaagtatatggaagagacaaagataaagagcatattgtagagtttcttctaaggcatgctggtgacagtgaagaactctctgtcta |
403 |
Q |
| |
|
|| |||||||| | ||||||||||||||||| || | |||||| |||| |||||||||||||| ||||||| || |||||||||||||||||||| |
|
|
| T |
5215 |
tcgtcactgaaccgaaagtatatggaagagatcgtgacagagagcaagttgttgagtttcttctaagtcatgctgtcgatagtgaagaactctctgtcta |
5116 |
T |
|
| Q |
404 |
ttccattgttggccacggtggatatggaaaaacaacacttgctcaaacagtcttcaatgatgaaagggtaaagacacattttgacttgaaaatatgg--g |
501 |
Q |
| |
|
|||||||||||| ||||| | ||||||||||||||||||||| || |||||||| ||||||||| | ||||| ||| |||||||||||||| | |
|
|
| T |
5115 |
ttccattgttggtgttggtgggcaaggaaaaacaacacttgctcaagtggtgttcaatgaggaaagggtagatacacactttaacttgaaaatatgggtg |
5016 |
T |
|
| Q |
502 |
tgtgtttctggtgatatcaattcgatgaaagttttagagtccaccatagaaaacaccattggaaaaaatccacatctctcgtctttagagtcaa |
595 |
Q |
| |
|
|||||||||| ||| | ||| |||||||||||| |||||| ||||||| |||| ||||||||||||| |||||||||||||||| |||| |
|
|
| T |
5015 |
tgtgtttctgaggattttaatatgatgaaagttttgcagtccatcatagaatccaccgatggaaaaaatccagatctctcgtctttagaatcaa |
4922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 173; Significance: 1e-92; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 72 - 516
Target Start/End: Complemental strand, 13378868 - 13378419
Alignment:
| Q |
72 |
cttgatgatatattggatgaatgttcaataaccttaaaagcacatgg---cgacaacaagcggatcactcgtttccatcctatgaagattttggctcgtc |
168 |
Q |
| |
|
|||||||||||||| || |||| ||| |||| | ||||||||||| |||| ||||| ||||||||||||||||||||| ||||||||||||||| | |
|
|
| T |
13378868 |
cttgatgatatattagacgaatattcgataagatccaaagcacatggagacgacgacaagtggatcactcgtttccatcctaagaagattttggctcgcc |
13378769 |
T |
|
| Q |
169 |
gcaacattgggaagaggatgaaggaggttgctaaaaagattcatgatattgctgaagaaaggatgaagttcggattacatgtgggggtcatcgagcgcca |
268 |
Q |
| |
|
| ||||| ||||||||||| |||||||||||||||||| ||| |||||||||||| |||| ||||| |||||||||||||| ||||| |||| | |
|
|
| T |
13378768 |
gaggtattggaaagaggatgaaagaggttgctaaaaagattgatgttattgctgaagaccggatcaagtttggattacatgtgggagtcatggagcatct |
13378669 |
T |
|
| Q |
269 |
accagaagatgaagagtggcggcaaactacgtctgtcatcactgaatccaaagtatatggaagagacaaagataaagagcatattgtagagtttcttcta |
368 |
Q |
| |
|
||||||||| |||||||| |||||||| ||| |||||||| |||||||||||||||||||||||||||||||||| || ||||| |||| ||||||| |
|
|
| T |
13378668 |
accagaagacatggagtggcgccaaactacttctatcatcactaaatccaaagtatatggaagagacaaagataaagaacaaattgttgagtatcttcta |
13378569 |
T |
|
| Q |
369 |
aggcatgctggtgacagtgaagaactctctgtctattccattgttggccacggtggatatggaaaaacaacacttgctcaaacagtcttcaatgatgaaa |
468 |
Q |
| |
|
||| |||| || |||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| || | ||| ||||||| |
|
|
| T |
13378568 |
agggatgcaagtaacagagaagatatctctgtctattccattgttggcctaggtggatatggaaaaacaacacttgctcaattggtgtacaacgatgaaa |
13378469 |
T |
|
| Q |
469 |
gggtaaagacacattttgacttgaaaatatggg--tgtgtttctggtgat |
516 |
Q |
| |
|
|||| || || ||||||||||||||||||| |||||||||| |||| |
|
|
| T |
13378468 |
acgtaagcacccactttgacttgaaaatatgggtttgtgtttctgatgat |
13378419 |
T |
|
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