View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4201-Insertion-2 (Length: 1037)

Name: NF4201-Insertion-2
Description: NF4201
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4201-Insertion-2
NF4201-Insertion-2
[»] chr5 (61 HSPs)
chr5 (7-729)||(43254179-43254906)
chr5 (766-982)||(43240916-43241135)
chr5 (44-245)||(22668823-22669022)
chr5 (489-606)||(43258556-43258675)
chr5 (628-729)||(22981117-22981218)
chr5 (624-729)||(23115976-23116081)
chr5 (628-729)||(24886411-24886512)
chr5 (628-729)||(35511232-35511333)
chr5 (628-729)||(38527987-38528088)
chr5 (629-728)||(31786397-31786496)
chr5 (626-729)||(42343045-42343148)
chr5 (629-727)||(12910681-12910779)
chr5 (628-729)||(22255506-22255607)
chr5 (629-729)||(39573135-39573235)
chr5 (628-722)||(23954552-23954646)
chr5 (628-729)||(19120183-19120284)
chr5 (628-729)||(22019947-22020048)
chr5 (628-729)||(25889694-25889795)
chr5 (628-729)||(33908556-33908657)
chr5 (625-729)||(8437289-8437393)
chr5 (625-729)||(22973829-22973933)
chr5 (640-726)||(699477-699563)
chr5 (639-729)||(8741646-8741736)
chr5 (627-729)||(31705361-31705463)
chr5 (769-931)||(43235667-43235828)
chr5 (632-729)||(2888199-2888296)
chr5 (640-729)||(15992302-15992391)
chr5 (632-729)||(25669900-25669997)
chr5 (628-729)||(40133709-40133810)
chr5 (626-729)||(17157779-17157882)
chr5 (626-729)||(25500674-25500777)
chr5 (628-729)||(26269133-26269234)
chr5 (628-729)||(27330628-27330729)
chr5 (628-729)||(28416301-28416402)
chr5 (628-729)||(36867086-36867187)
chr5 (628-729)||(43308410-43308511)
chr5 (626-729)||(27318236-27318340)
chr5 (630-729)||(32563464-32563563)
chr5 (651-729)||(7208637-7208715)
chr5 (623-729)||(14409086-14409192)
chr5 (645-726)||(35504692-35504773)
chr5 (628-729)||(35934220-35934321)
chr5 (629-729)||(9200548-9200648)
chr5 (625-729)||(15724812-15724916)
chr5 (630-729)||(5837879-5837978)
chr5 (646-728)||(7693546-7693628)
chr5 (651-729)||(14919312-14919390)
chr5 (627-729)||(36860748-36860850)
chr5 (660-729)||(35826268-35826337)
chr5 (646-729)||(30969091-30969175)
chr5 (631-729)||(5830216-5830314)
chr5 (627-729)||(8467050-8467152)
chr5 (501-610)||(43225804-43225917)
chr5 (630-729)||(13956116-13956213)
chr5 (624-671)||(11898197-11898244)
chr5 (628-678)||(34853845-34853895)
chr5 (635-675)||(12080405-12080445)
chr5 (628-683)||(1428923-1428978)
chr5 (630-675)||(21321087-21321132)
chr5 (276-372)||(22668696-22668792)
chr5 (185-230)||(32021145-32021190)
[»] chr7 (52 HSPs)
chr7 (44-462)||(11896363-11896783)
chr7 (46-467)||(22792704-22793127)
chr7 (46-462)||(25001581-25001999)
chr7 (630-729)||(24212041-24212140)
chr7 (627-729)||(35353407-35353509)
chr7 (626-729)||(6546818-6546921)
chr7 (627-729)||(7335092-7335194)
chr7 (631-729)||(9355590-9355688)
chr7 (627-729)||(38258878-38258980)
chr7 (628-729)||(18797626-18797727)
chr7 (628-729)||(31520502-31520603)
chr7 (628-729)||(37703259-37703360)
chr7 (626-729)||(15612518-15612621)
chr7 (628-729)||(26980605-26980706)
chr7 (628-729)||(29173821-29173922)
chr7 (634-729)||(31578831-31578926)
chr7 (627-729)||(17842344-17842446)
chr7 (628-729)||(8861584-8861685)
chr7 (628-729)||(10358975-10359076)
chr7 (628-729)||(26587853-26587954)
chr7 (628-729)||(30055826-30055927)
chr7 (629-729)||(32432751-32432851)
chr7 (645-729)||(46480907-46480991)
chr7 (627-729)||(12390409-12390511)
chr7 (628-722)||(21991933-21992027)
chr7 (631-729)||(23111491-23111589)
chr7 (627-729)||(37110173-37110275)
chr7 (631-727)||(44411304-44411400)
chr7 (650-729)||(37347320-37347399)
chr7 (626-729)||(41764837-41764940)
chr7 (628-729)||(4583218-4583319)
chr7 (637-725)||(10481908-10481996)
chr7 (624-722)||(15672514-15672614)
chr7 (660-729)||(22687530-22687599)
chr7 (628-729)||(37704481-37704582)
chr7 (210-454)||(24437085-24437331)
chr7 (627-729)||(48928057-48928159)
chr7 (660-729)||(25691337-25691406)
chr7 (660-729)||(32820846-32820915)
chr7 (629-729)||(27284043-27284145)
chr7 (656-729)||(32592996-32593068)
chr7 (664-729)||(43925394-43925459)
chr7 (651-729)||(5657264-5657343)
chr7 (658-729)||(34361967-34362040)
chr7 (628-717)||(44598978-44599066)
chr7 (673-729)||(11071502-11071558)
chr7 (626-702)||(12166215-12166291)
chr7 (624-673)||(8759575-8759624)
chr7 (627-675)||(4902657-4902705)
chr7 (697-729)||(12166042-12166074)
chr7 (210-256)||(20369549-20369595)
chr7 (628-693)||(33688053-33688118)
[»] chr3 (58 HSPs)
chr3 (96-462)||(49722982-49723350)
chr3 (70-467)||(27429663-27430063)
chr3 (630-729)||(20373025-20373124)
chr3 (629-729)||(39282967-39283067)
chr3 (627-729)||(4015774-4015876)
chr3 (624-726)||(21193925-21194027)
chr3 (628-726)||(40552019-40552117)
chr3 (627-729)||(48355256-48355358)
chr3 (628-729)||(3362570-3362671)
chr3 (628-729)||(37158023-37158124)
chr3 (628-729)||(37203383-37203484)
chr3 (635-729)||(1090008-1090102)
chr3 (616-729)||(33378533-33378646)
chr3 (629-729)||(22445826-22445926)
chr3 (626-729)||(21009559-21009662)
chr3 (628-729)||(22622478-22622579)
chr3 (628-729)||(26941020-26941121)
chr3 (628-729)||(46297522-46297623)
chr3 (628-729)||(53228912-53229013)
chr3 (630-729)||(47481838-47481937)
chr3 (634-729)||(54506123-54506218)
chr3 (628-730)||(11356918-11357020)
chr3 (632-729)||(11357145-11357242)
chr3 (628-729)||(14586440-14586541)
chr3 (630-729)||(42505837-42505936)
chr3 (627-729)||(2008254-2008356)
chr3 (628-729)||(29099661-29099763)
chr3 (628-729)||(36012454-36012556)
chr3 (628-729)||(52040682-52040783)
chr3 (651-729)||(33698468-33698546)
chr3 (628-729)||(43975652-43975753)
chr3 (652-729)||(44891812-44891889)
chr3 (645-729)||(24707892-24707976)
chr3 (628-722)||(11467132-11467226)
chr3 (646-729)||(44186295-44186378)
chr3 (632-729)||(4761412-4761509)
chr3 (618-714)||(35844577-35844673)
chr3 (662-729)||(22451283-22451350)
chr3 (627-729)||(51212536-51212632)
chr3 (663-729)||(50475133-50475199)
chr3 (660-729)||(7327274-7327343)
chr3 (656-729)||(40936288-40936361)
chr3 (652-726)||(3654983-3655058)
chr3 (627-729)||(24488720-24488823)
chr3 (652-722)||(29164124-29164194)
chr3 (628-729)||(32373785-32373885)
chr3 (651-729)||(25580054-25580132)
chr3 (629-690)||(34133312-34133373)
chr3 (691-729)||(38592013-38592051)
chr3 (649-726)||(27480139-27480216)
chr3 (625-683)||(13498678-13498736)
chr3 (613-675)||(42663971-42664033)
chr3 (629-699)||(45174819-45174889)
chr3 (634-675)||(5125556-5125597)
chr3 (628-683)||(38592046-38592101)
chr3 (691-729)||(34133250-34133288)
chr3 (660-702)||(43348556-43348598)
chr3 (632-673)||(54607984-54608025)
[»] scaffold0884 (1 HSPs)
scaffold0884 (44-332)||(698-986)
[»] chr8 (44 HSPs)
chr8 (44-327)||(18621262-18621545)
chr8 (628-729)||(37970285-37970386)
chr8 (628-729)||(43643361-43643462)
chr8 (628-729)||(5299712-5299813)
chr8 (628-729)||(16446641-16446742)
chr8 (628-729)||(35859257-35859358)
chr8 (629-729)||(41362745-41362845)
chr8 (627-729)||(7890722-7890824)
chr8 (630-729)||(23854200-23854298)
chr8 (628-729)||(1149398-1149499)
chr8 (628-729)||(34895285-34895386)
chr8 (629-729)||(31933653-31933753)
chr8 (631-729)||(466155-466253)
chr8 (627-729)||(8803581-8803683)
chr8 (631-729)||(34951826-34951924)
chr8 (627-729)||(38644301-38644403)
chr8 (628-729)||(4132452-4132553)
chr8 (652-729)||(35459501-35459578)
chr8 (634-729)||(1953760-1953855)
chr8 (627-729)||(1205250-1205352)
chr8 (653-729)||(12587905-12587981)
chr8 (624-729)||(16223186-16223294)
chr8 (651-729)||(44869820-44869898)
chr8 (628-729)||(30654349-30654449)
chr8 (628-729)||(33198125-33198226)
chr8 (626-719)||(10554968-10555062)
chr8 (628-729)||(11727347-11727449)
chr8 (660-729)||(27082636-27082705)
chr8 (633-729)||(18259402-18259498)
chr8 (628-729)||(33906535-33906634)
chr8 (662-728)||(24823194-24823260)
chr8 (648-728)||(40862743-40862824)
chr8 (624-729)||(6098275-6098380)
chr8 (627-729)||(12876433-12876535)
chr8 (628-729)||(36694732-36694833)
chr8 (649-729)||(43025997-43026078)
chr8 (628-700)||(13307931-13308003)
chr8 (628-699)||(41910824-41910895)
chr8 (629-690)||(9864533-9864594)
chr8 (634-729)||(39098891-39098986)
chr8 (633-673)||(1872582-1872622)
chr8 (698-729)||(1149756-1149787)
chr8 (628-675)||(30650899-30650946)
chr8 (691-729)||(9864471-9864509)
[»] chr1 (61 HSPs)
chr1 (97-413)||(11777451-11777764)
chr1 (628-729)||(10923047-10923148)
chr1 (624-729)||(34012133-34012238)
chr1 (626-729)||(46931730-46931833)
chr1 (628-729)||(32216375-32216476)
chr1 (627-729)||(2960068-2960170)
chr1 (624-729)||(19899519-19899624)
chr1 (628-729)||(23999668-23999769)
chr1 (628-729)||(48353862-48353963)
chr1 (628-727)||(32267356-32267455)
chr1 (628-729)||(11742123-11742224)
chr1 (628-729)||(14758352-14758453)
chr1 (624-729)||(27563656-27563761)
chr1 (627-727)||(10181761-10181861)
chr1 (630-729)||(15168416-15168515)
chr1 (626-729)||(27532735-27532837)
chr1 (626-729)||(47682247-47682350)
chr1 (628-729)||(8222447-8222549)
chr1 (629-726)||(30254746-30254843)
chr1 (645-729)||(27763082-27763166)
chr1 (651-729)||(1547591-1547669)
chr1 (631-729)||(9902812-9902910)
chr1 (628-729)||(3535243-3535344)
chr1 (624-729)||(15752349-15752454)
chr1 (628-729)||(37451605-37451706)
chr1 (649-729)||(28564559-28564639)
chr1 (626-729)||(22171031-22171134)
chr1 (634-729)||(38823534-38823629)
chr1 (619-729)||(47279509-47279620)
chr1 (631-729)||(4330601-4330699)
chr1 (627-729)||(21289920-21290022)
chr1 (628-729)||(31962936-31963038)
chr1 (628-722)||(48620916-48621010)
chr1 (645-729)||(7078835-7078919)
chr1 (628-726)||(15383256-15383355)
chr1 (631-726)||(27266959-27267053)
chr1 (627-729)||(16415966-16416068)
chr1 (645-729)||(39393704-39393788)
chr1 (651-729)||(31621326-31621405)
chr1 (628-729)||(33725366-33725468)
chr1 (649-729)||(28769973-28770053)
chr1 (631-729)||(51129179-51129275)
chr1 (212-274)||(11778269-11778331)
chr1 (660-729)||(238300-238369)
chr1 (628-729)||(1359691-1359791)
chr1 (665-729)||(3309473-3309538)
chr1 (661-729)||(27227273-27227341)
chr1 (628-693)||(38759846-38759911)
chr1 (660-729)||(42721356-42721425)
chr1 (667-729)||(25160952-25161015)
chr1 (626-675)||(26970858-26970907)
chr1 (673-729)||(30326751-30326808)
chr1 (632-675)||(7843122-7843165)
chr1 (687-722)||(18422971-18423006)
chr1 (632-675)||(28013040-28013083)
chr1 (632-675)||(47555092-47555135)
chr1 (255-397)||(19002449-19002591)
chr1 (633-675)||(42663232-42663274)
chr1 (632-673)||(422322-422363)
chr1 (633-674)||(10598223-10598264)
chr1 (652-729)||(41926476-41926553)
[»] chr6 (20 HSPs)
chr6 (46-274)||(4928513-4928742)
chr6 (629-729)||(1946159-1946260)
chr6 (628-729)||(6090941-6091042)
chr6 (626-729)||(20768406-20768509)
chr6 (628-729)||(3879698-3879799)
chr6 (628-729)||(5627716-5627817)
chr6 (630-729)||(7054533-7054632)
chr6 (626-716)||(7234789-7234879)
chr6 (651-729)||(33892794-33892872)
chr6 (640-722)||(8513552-8513634)
chr6 (651-729)||(29182485-29182563)
chr6 (649-722)||(33619164-33619237)
chr6 (628-729)||(4318575-4318682)
chr6 (672-727)||(33724062-33724117)
chr6 (667-729)||(21016916-21016978)
chr6 (663-722)||(6089227-6089286)
chr6 (97-240)||(34222167-34222310)
chr6 (97-240)||(3340260-3340404)
chr6 (628-675)||(6613657-6613704)
chr6 (624-680)||(21016722-21016778)
[»] chr4 (52 HSPs)
chr4 (628-729)||(25184437-25184538)
chr4 (628-729)||(34361277-34361378)
chr4 (627-729)||(879333-879435)
chr4 (624-729)||(7703833-7703938)
chr4 (628-729)||(49376291-49376392)
chr4 (625-729)||(19440431-19440535)
chr4 (627-729)||(6864359-6864461)
chr4 (628-729)||(33816302-33816403)
chr4 (628-729)||(35020817-35020918)
chr4 (628-729)||(36493475-36493576)
chr4 (629-726)||(3042946-3043043)
chr4 (640-729)||(23761395-23761484)
chr4 (628-729)||(32912365-32912466)
chr4 (624-729)||(46887940-46888045)
chr4 (628-729)||(47254064-47254165)
chr4 (626-729)||(19089237-19089340)
chr4 (624-729)||(25700838-25700943)
chr4 (628-729)||(26896412-26896513)
chr4 (628-729)||(28002772-28002873)
chr4 (624-729)||(30002423-30002528)
chr4 (624-729)||(37775982-37776087)
chr4 (625-729)||(32579770-32579874)
chr4 (645-729)||(39400332-39400416)
chr4 (626-729)||(55240889-55240992)
chr4 (627-729)||(4598306-4598408)
chr4 (628-729)||(23431879-23431980)
chr4 (628-729)||(29583986-29584087)
chr4 (625-729)||(50765044-50765148)
chr4 (628-729)||(4205308-4205409)
chr4 (652-729)||(7152014-7152091)
chr4 (628-729)||(17272288-17272389)
chr4 (628-729)||(37663527-37663628)
chr4 (628-729)||(38012586-38012687)
chr4 (661-729)||(1815625-1815693)
chr4 (645-729)||(33341722-33341806)
chr4 (628-727)||(37288054-37288154)
chr4 (634-725)||(32592412-32592503)
chr4 (651-729)||(50697566-50697644)
chr4 (626-729)||(4933996-4934100)
chr4 (629-729)||(9139553-9139653)
chr4 (654-729)||(35025379-35025453)
chr4 (627-729)||(5047751-5047853)
chr4 (628-729)||(17168037-17168138)
chr4 (628-729)||(17173614-17173715)
chr4 (628-728)||(42200056-42200155)
chr4 (667-729)||(55477716-55477778)
chr4 (660-729)||(46883932-46884001)
chr4 (630-718)||(27396949-27397037)
chr4 (670-725)||(34947923-34947978)
chr4 (632-673)||(14246531-14246572)
chr4 (632-675)||(47073065-47073108)
chr4 (193-230)||(21781472-21781509)
[»] chr2 (39 HSPs)
chr2 (628-729)||(18494059-18494160)
chr2 (628-729)||(31862176-31862277)
chr2 (629-729)||(43648024-43648124)
chr2 (627-729)||(19289100-19289202)
chr2 (627-729)||(41961164-41961266)
chr2 (626-729)||(19424418-19424521)
chr2 (628-729)||(33660155-33660256)
chr2 (625-729)||(35959216-35959320)
chr2 (628-727)||(29241923-29242022)
chr2 (628-729)||(4167246-4167347)
chr2 (630-729)||(44913991-44914090)
chr2 (628-715)||(45328028-45328114)
chr2 (628-726)||(2325156-2325254)
chr2 (628-729)||(11366158-11366259)
chr2 (628-729)||(41465825-41465926)
chr2 (628-729)||(4763955-4764057)
chr2 (651-729)||(7006739-7006817)
chr2 (651-729)||(43770649-43770727)
chr2 (628-729)||(26357901-26358002)
chr2 (633-729)||(33709015-33709111)
chr2 (647-723)||(39167166-39167242)
chr2 (630-729)||(3177263-3177362)
chr2 (651-729)||(5881853-5881931)
chr2 (629-726)||(33902341-33902439)
chr2 (628-729)||(19500695-19500794)
chr2 (628-729)||(27349731-27349827)
chr2 (645-729)||(31570529-31570613)
chr2 (667-726)||(33550800-33550859)
chr2 (656-729)||(37906034-37906108)
chr2 (659-729)||(13711783-13711853)
chr2 (630-729)||(41051083-41051179)
chr2 (624-724)||(17071544-17071646)
chr2 (624-724)||(17053904-17054005)
chr2 (652-729)||(18257340-18257417)
chr2 (660-729)||(41463400-41463469)
chr2 (632-673)||(6357160-6357201)
chr2 (628-693)||(36642296-36642361)
chr2 (645-697)||(4263704-4263756)
chr2 (632-675)||(18514400-18514443)
[»] scaffold0008 (1 HSPs)
scaffold0008 (624-723)||(267606-267705)
[»] scaffold0291 (1 HSPs)
scaffold0291 (628-729)||(8211-8312)
[»] scaffold0022 (1 HSPs)
scaffold0022 (628-729)||(145775-145876)
[»] scaffold0061 (1 HSPs)
scaffold0061 (628-729)||(44280-44381)
[»] scaffold0017 (1 HSPs)
scaffold0017 (628-729)||(154406-154507)
[»] scaffold0318 (1 HSPs)
scaffold0318 (629-729)||(12233-12332)
[»] scaffold0002 (4 HSPs)
scaffold0002 (664-729)||(452-517)
scaffold0002 (662-729)||(408223-408290)
scaffold0002 (627-729)||(93860-93961)
scaffold0002 (625-680)||(690-745)
[»] scaffold0057 (1 HSPs)
scaffold0057 (348-462)||(77747-77863)
[»] scaffold0312 (1 HSPs)
scaffold0312 (632-673)||(8209-8250)


Alignment Details
Target: chr5 (Bit Score: 596; Significance: 0; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 596; E-Value: 0
Query Start/End: Original strand, 7 - 729
Target Start/End: Complemental strand, 43254906 - 43254179
Alignment:
Q  7 agttttaagccgttgcctaaatggagtttgggtcgtaggtatcacacaaggtttgttggcctatatgaggatgaatctaggttcactaactttgccattt 106  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43254906 agttttatgccgttgcctaaatggagtttggatcgtaggtatcacacaaggtttgttggcctatatgaggatgaatctaggttcactaactttgccattt 43254807  T
Q  107 atcaactgatttttgtccagtgtgacaaagtgaacaaatccgagaccatgtgtagtcgaaatgtgcgtgatgaggcagaagaaatgatccgtaattggat 206  Q
    |||||||||||||||||||| |  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43254806 atcaactgatttttgtccagcg--acaaagtgaacaaatctgagaccatgtgtagtcgaaatgtgcgtgatgaggcagaagaaatgatccgtaattggat 43254709  T
Q  207 aggaaaaaagactttggattctcacatctcctttatcagcattagaagatggaagttgttgatgaatgagttgctagcttatggaatttggtttaagtta 306  Q
    || |||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  43254708 agaaaaaaagactctgaattctcacatctcctttgtcagcattagaagatggaagttgttgatgaatgagttgctagcttatggaatttggtttaagttc 43254609  T
Q  307 tcatatttgtattcaaagtttaggtgtactgcaaatcctgttttaataggttttttctattgtattggctcttcaaaattgttggggaataccctttcaa 406  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43254608 tcatatttgtattcaaagtttaggtgtac-gcaaatcctgttttaataggttttttctattgtattggctcttcaaaattgttggggaataccctttcaa 43254510  T
Q  407 agttaactctagctgcttgtaa--ctctctattttatggaatgttaagctattgtttattgtc----nnnnnnncttctttgttgcaatttaatgtagtg 500  Q
    ||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||           ||||||||||||||||||||||||||    
T  43254509 agttaactctagctgcttgtaactctctctattttatgaaatgttaagctattgtttattgtcaaaaaaaaaaacttctttgttgcaatttaatgtagtg 43254410  T
Q  501 aaaattaaaattaattcttaacaaacatctagtgtataagtttgtttggaaaatgaatcatatttgtgagtatact--acatttgtcaatgctttcgaaa 598  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  43254409 aaaattaaaattaattcttaacaaacatctagtgtataagtttgtttggaaaatgaatcatatttgtgagtatactcaacatttgtcaatgctttcgaaa 43254310  T
Q  599 taaataaataaaacttacaatttagttatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattc 698  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||| ||||||||||||    
T  43254309 taaataaataaaacttacaatttagttatgggagcttctatggtgcagtcaggaaattgacttttttggaaaagttaattttgatcttaatgtttgattc 43254210  T
Q  699 atttttaaattgttgattactgattaatgat 729  Q
    |||||||||||||||||||||||||||||||    
T  43254209 atttttaaattgttgattactgattaatgat 43254179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 766 - 982
Target Start/End: Complemental strand, 43241135 - 43240916
Alignment:
Q  766 gtgctttcataatttgatttagatgccaaacccttgcgctaggaatttccatttttcattatttcataatttgcttcatatatcaaacactttgcactta 865  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  43241135 gtgctttcataatttgatttagatgccaaacccttgcgctaggaatttccatttttcattatttcgtaatttgcttcatatatcaaacactttgcactta 43241036  T
Q  866 caatctacaagaaaaaattattcaaatgtaaagtaaaacactctacatattcaaccatcgatatactaagttacaaagaccacgatgtccattg-atat- 963  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  43241035 caatctacaagaagaaattattcaaatgtaaagtaaaacactctacatattcaaccatcgatatactaagttacaaagaccacgatgtccattgaatata 43240936  T
Q  964 atac-ggagacatttattta 982  Q
    |||| |||||||||||||||    
T  43240935 atacgggagacatttattta 43240916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 44 - 245
Target Start/End: Complemental strand, 22669022 - 22668823
Alignment:
Q  44 ggtatcacacaaggtttgttggcctatatgaggatgaatctaggttcactaactttgccatttatcaactgatttttgtccagtgtgacaaagtgaacaa 143  Q
    ||||||||||||| ||| ||||||| |||||| ||||||| || ||||||| |||||||    ||||| ||||||||||||||  |||||||||||||||    
T  22669022 ggtatcacacaagctttattggcctctatgagaatgaatccagtttcactacctttgccc---atcaattgatttttgtccagcatgacaaagtgaacaa 22668926  T
Q  144 atccgagaccat-gtgtagtcgaaatgtgcgtgatgaggcagaagaaatgatccgtaattggataggaaaaaagactttggattctcacatctcctttat 242  Q
    |||||||||||  ||||||| |||||| |||||||| ||  |||||||||||| |||| |||||||||||||||||| |||||||||||||||||||| |    
T  22668925 atccgagaccaaagtgtagtagaaatgggcgtgatgtggttgaagaaatgatctgtaactggataggaaaaaagactctggattctcacatctcctttgt 22668826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 489 - 606
Target Start/End: Complemental strand, 43258675 - 43258556
Alignment:
Q  489 tttaatgtagtgaaaattaaaattaattcttaacaaacatctagtgtataagtttgtttggaaaatgaatcatatttgtgagtatact--acatttgtca 586  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||  ||||||||||    
T  43258675 tttaatgtagtgaaaattaaaatgaattcttaacaaacatttagtgtataagtttgattggaaaatgaatcatatttgcgagtatactcaacatttgtca 43258576  T
Q  587 atgctttcgaaataaataaa 606  Q
    ||||||||||||||||||||    
T  43258575 atgctttcgaaataaataaa 43258556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 22981218 - 22981117
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22981218 gggagcttctatggtgcagtcaggaaactgactttttaaaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactgattaatg 22981119  T
Q  728 at 729  Q
    ||    
T  22981118 at 22981117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 624 - 729
Target Start/End: Original strand, 23115976 - 23116081
Alignment:
Q  624 ttatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgatt 723  Q
    ||||||||| ||||| |||| |||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  23115976 ttatgggagtttctacggtgaagtcaggaaaatgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgatt 23116075  T
Q  724 aatgat 729  Q
    ||||||    
T  23116076 aatgat 23116081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 24886512 - 24886411
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  24886512 gggagcttttatggtgcagtcaagaaactgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgatttctgattaatg 24886413  T
Q  728 at 729  Q
    ||    
T  24886412 at 24886411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 35511232 - 35511333
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  35511232 gggagcttctacggtgcagtcaggaaactgacttttttaaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 35511331  T
Q  728 at 729  Q
    ||    
T  35511332 at 35511333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 38527987 - 38528088
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| |||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  38527987 gggagcttctacggtgcagtcaggaaactgatttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 38528086  T
Q  728 at 729  Q
    ||    
T  38528087 at 38528088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 629 - 728
Target Start/End: Original strand, 31786397 - 31786496
Alignment:
Q  629 ggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatga 728  Q
    |||| |||||||||| | ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  31786397 ggagattctatggtgcaatcaggaaactgacttttttgaaaaagttaattttgatattaatgtttgattcatttttaaattgttgattactgattaatga 31786496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 626 - 729
Target Start/End: Complemental strand, 42343148 - 42343045
Alignment:
Q  626 atgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaa 725  Q
    ||||||||||||| |||| ||||| ||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  42343148 atgggagcttctacggtgcagtcatgaaactgacttttctgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaa 42343049  T
Q  726 tgat 729  Q
    ||||    
T  42343048 tgat 42343045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 629 - 727
Target Start/End: Complemental strand, 12910779 - 12910681
Alignment:
Q  629 ggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  12910779 ggagcttctatggtgcagtcaggaaactgacttttttggaaaagttaattatgatcttaatgtttgattcatttttaaattgttgattgctgattaatg 12910681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 22255607 - 22255506
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  22255607 gggagcttctacggtacagtcaggaaactgactttttttaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 22255508  T
Q  728 at 729  Q
    ||    
T  22255507 at 22255506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 629 - 729
Target Start/End: Complemental strand, 39573235 - 39573135
Alignment:
Q  629 ggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatga 728  Q
    |||||||||| |||| ||| | |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  39573235 ggagcttctacggtgcagttatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatga 39573136  T
Q  729 t 729  Q
    |    
T  39573135 t 39573135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 628 - 722
Target Start/End: Original strand, 23954552 - 23954646
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgat 722  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||| ||||    
T  23954552 gggagcttctatggtgcagtcaggaaactgacttttttgaaaaagttaattatgatcttaatgtttaattcatttttaaattgttgattaatgat 23954646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 19120284 - 19120183
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||| |||||||||||    
T  19120284 gggagcttctaaggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgattgattcatttttaaattgttgatcactgattaatg 19120185  T
Q  728 at 729  Q
    ||    
T  19120184 at 19120183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 22020048 - 22019947
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||| |||||| |||| ||||| |||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||    
T  22020048 gggaacttctacggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatatttgattcatttttaaattgttgattactgattaatg 22019949  T
Q  728 at 729  Q
    ||    
T  22019948 at 22019947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 25889795 - 25889694
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| | || ||||||||||||||||||| || |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  25889795 gggagcttctacgatgcagtcaggaaactgacttttctggaaaagttaattttgatcttaatgtttaattcatttttaaattgttgattactgattaatg 25889696  T
Q  728 at 729  Q
    ||    
T  25889695 at 25889694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 33908657 - 33908556
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||| |||| |||| ||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  33908657 gggagcatctacggtgcagttagaaaactgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattgctgattaatg 33908558  T
Q  728 at 729  Q
    ||    
T  33908557 at 33908556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 625 - 729
Target Start/End: Complemental strand, 8437393 - 8437289
Alignment:
Q  625 tatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgatta 724  Q
    ||||||||| |||| | || ||||||||||||||||||||||||||||||||||||||| | ||| ||| ||||||||||||||||||||||||||||||    
T  8437393 tatgggagcatctacgatgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatatttaattcatttttaaattgttgattactgatta 8437294  T
Q  725 atgat 729  Q
    |||||    
T  8437293 atgat 8437289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 625 - 729
Target Start/End: Original strand, 22973829 - 22973933
Alignment:
Q  625 tatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgatta 724  Q
    ||||| || |||||||||| |||||| ||||||| |||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  22973829 tatggaagtttctatggtgcagtcagaaaactgattttttttaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgatta 22973928  T
Q  725 atgat 729  Q
    |||||    
T  22973929 atgat 22973933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 640 - 726
Target Start/End: Complemental strand, 699563 - 699477
Alignment:
Q  640 ggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    |||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  699563 ggtgcagtcaggaaactgacttttttggaaaagttaattttgatcttaatgtttgattcatttttaaattgttaattactgattaat 699477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 639 - 729
Target Start/End: Original strand, 8741646 - 8741736
Alignment:
Q  639 tggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||| ||||| ||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  8741646 tggtgcagtcatgaaacagacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgat 8741736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 627 - 729
Target Start/End: Original strand, 31705361 - 31705463
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    |||||| ||||| |||| ||||| |||| ||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||    
T  31705361 tgggagattctacggtgcagtcaagaaattgacttttttgaaaaagttaatttttattttaatgtttgattcatttttaaattgttgattactgattaat 31705460  T
Q  727 gat 729  Q
    |||    
T  31705461 gat 31705463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 769 - 931
Target Start/End: Complemental strand, 43235828 - 43235667
Alignment:
Q  769 ctttcataatttgatttagatgccaaacccttgcgctaggaatttccatttttcattatttcataatttgcttcatatatcaaacactttgcacttacaa 868  Q
    |||||||||||||||||||||| |||||  ||   ||| ||||||||||||||| ||||||| |||||||||||| |||| ||| | || |||||||||     
T  43235828 ctttcataatttgatttagatgtcaaacatttaaactaagaatttccatttttctttatttcctaatttgcttcagatataaaaaagtt-gcacttacat 43235730  T
Q  869 tctacaagaaaaaattattcaaatgtaaagtaaaacactctacatattcaaccatcgatatac 931  Q
    ||| |||||| |||| ||||||||||||||||||| || |||||||| ||||||| |||||||    
T  43235729 tctgcaagaagaaataattcaaatgtaaagtaaaataccctacatatccaaccattgatatac 43235667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 632 - 729
Target Start/End: Original strand, 2888199 - 2888296
Alignment:
Q  632 gcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||| |||| |||||| ||| ||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||    
T  2888199 gcttctacggtgcagtcagaaaattgacttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgttgattactgattaatgat 2888296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 640 - 729
Target Start/End: Original strand, 15992302 - 15992391
Alignment:
Q  640 ggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||| ||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||    
T  15992302 ggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttaattactgattaatgat 15992391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 632 - 729
Target Start/End: Complemental strand, 25669997 - 25669900
Alignment:
Q  632 gcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||| |||| ||||| |||||||| ||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||    
T  25669997 gcttctacggtgcagtcatgaaactgatttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgttgattactgattaatgat 25669900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 40133810 - 40133709
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| |||||| ||| ||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||| |||    
T  40133810 gggagcttctacggtgcagtcagaaaattgacttttttgaaaaagttaattttaatcttaatgtttaattcatttttaaattgttgattactgattcatg 40133711  T
Q  728 at 729  Q
    ||    
T  40133710 at 40133709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 626 - 729
Target Start/End: Original strand, 17157779 - 17157882
Alignment:
Q  626 atgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaa 725  Q
    ||||||||||||| |||  ||||| |||| |||||||||||||||||| || |||||| | |||||||||||||||||||||||||||||||||||||||    
T  17157779 atgggagcttctacggtacagtcaagaaattgacttttttgaaaaagtcaagtttgattttaatgtttgattcatttttaaattgttgattactgattaa 17157878  T
Q  726 tgat 729  Q
    ||||    
T  17157879 tgat 17157882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 626 - 729
Target Start/End: Original strand, 25500674 - 25500777
Alignment:
Q  626 atgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaa 725  Q
    ||||||||||||| |||| ||||| |||||||| ||||||||||||||||||||| |||| | | |||||||||||||||||||||| ||||||||||||    
T  25500674 atgggagcttctacggtgcagtcatgaaactgatttttttgaaaaagttaattttaatcttagtatttgattcatttttaaattgttaattactgattaa 25500773  T
Q  726 tgat 729  Q
    ||||    
T  25500774 tgat 25500777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 26269234 - 26269133
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||| ||||| |||| ||||| ||||||||||||| |||||||||||||||| |||| |||| ||| ||||||||||||||||||||||||||||||||    
T  26269234 gggagtttctacggtgcagtcatgaaactgacttttatgaaaaagttaattttaatcttaatgattggttcatttttaaattgttgattactgattaatg 26269135  T
Q  728 at 729  Q
    ||    
T  26269134 at 26269133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 27330729 - 27330628
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| ||||| |||| |||||| |||||||||||||||||| |||| |||||||||||||||||||||| ||| ||||||||||||||    
T  27330729 gggagcttctacggtgcagtcatgaaattgacttgtttgaaaaagttaattttaatcttaatgtttgattcatttttaaatcgttcattactgattaatg 27330630  T
Q  728 at 729  Q
    ||    
T  27330629 at 27330628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 28416301 - 28416402
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| ||||| ||| |||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||  |||||||||    
T  28416301 gggagcttctacggtgcagtcatgaagctgacttttttgaaaaagttaattttaatcttaatgtttgattcttttttaaattgttgattgttgattaatg 28416400  T
Q  728 at 729  Q
    ||    
T  28416401 at 28416402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 36867187 - 36867086
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| |||||| ||| |||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||| |||    
T  36867187 gggagcttctacggtgcagtcagaaaattgacttttttaaaaaagttaattttaatcttaatgtttaattcatttttaaattgttgattactgattcatg 36867088  T
Q  728 at 729  Q
    ||    
T  36867087 at 36867086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 43308410 - 43308511
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||| | | | |||||||| ||||||||||||||||| ||||||||||    
T  43308410 gggagcttcaatggtgcagttaggaaactgacttttttgaaaaagttaattttgattttagtatttgattcgtttttaaattgttgatttctgattaatg 43308509  T
Q  728 at 729  Q
    ||    
T  43308510 at 43308511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 626 - 729
Target Start/End: Original strand, 27318236 - 27318340
Alignment:
Q  626 atgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcattttt-aaattgttgattactgatta 724  Q
    ||||||| |||||||||| |||||| |||||||||||||| |||||||||||||| |||| |||||||||||||||||| ||||||||||||  ||||||    
T  27318236 atgggagtttctatggtgcagtcagaaaactgacttttttaaaaaagttaattttaatcttaatgtttgattcatttttaaaattgttgatttttgatta 27318335  T
Q  725 atgat 729  Q
    |||||    
T  27318336 atgat 27318340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 630 - 729
Target Start/End: Complemental strand, 32563563 - 32563464
Alignment:
Q  630 gagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||||| |||| ||| | |||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||| ||| ||||||||||||    
T  32563563 gagcttctacggtgcagttatgaaactgacttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgttaattgctgattaatgat 32563464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 651 - 729
Target Start/End: Original strand, 7208637 - 7208715
Alignment:
Q  651 gaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||||||||||| |||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||    
T  7208637 gaaactgactttttttaaaaagttaatttttattttaatgtttgattcatttttaaattgttgattactgattaatgat 7208715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 623 - 729
Target Start/End: Original strand, 14409086 - 14409192
Alignment:
Q  623 gttatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgat 722  Q
    |||| ||||||||||| |||| |||||||||||||| |||||||||||| |||||||| || | |||||| ||||||||||||||||||||||| ||||     
T  14409086 gttaagggagcttctacggtgcagtcaggaaactgatttttttgaaaaatttaattttaattttaatgttcgattcatttttaaattgttgattgctgaa 14409185  T
Q  723 taatgat 729  Q
    |||||||    
T  14409186 taatgat 14409192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 645 - 726
Target Start/End: Complemental strand, 35504773 - 35504692
Alignment:
Q  645 agtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    ||||| |||| |||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  35504773 agtcaagaaattgacttttttgaaaaagtcaattttgattttaatgtttgattcatttttaaattgttgattactgattaat 35504692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 35934321 - 35934220
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||| ||||| |||| ||| | |||||||| ||||||||||||||||||||| || | ||||||||| |||||||||||||||||||||||||||||||    
T  35934321 gggagtttctacggtgcagttatgaaactgatttttttgaaaaagttaattttaattttaatgtttgaatcatttttaaattgttgattactgattaatg 35934222  T
Q  728 at 729  Q
    ||    
T  35934221 at 35934220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 629 - 729
Target Start/End: Complemental strand, 9200648 - 9200548
Alignment:
Q  629 ggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatga 728  Q
    |||||||||| |||| ||||| |||||||| |||||||||||| |||||||| || | ||  ||||||||||||||||||||||||||||||||||||||    
T  9200648 ggagcttctacggtgcagtcatgaaactgatttttttgaaaaaattaattttaattttaaattttgattcatttttaaattgttgattactgattaatga 9200549  T
Q  729 t 729  Q
    |    
T  9200548 t 9200548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 625 - 729
Target Start/End: Complemental strand, 15724916 - 15724812
Alignment:
Q  625 tatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgatta 724  Q
    ||||||||||| || |||| ||||| |||||| | ||||||||||||||||||||| |  | ||||||||||||||||||||||||||||||| ||||||    
T  15724916 tatgggagcttttaaggtgaagtcatgaaactaatttttttgaaaaagttaattttaactttaatgtttgattcatttttaaattgttgattattgatta 15724817  T
Q  725 atgat 729  Q
    |||||    
T  15724816 atgat 15724812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 630 - 729
Target Start/End: Complemental strand, 5837978 - 5837879
Alignment:
Q  630 gagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||| ||||| |||||  ||||||||||||||||||| ||||||||| || | |||| |||||||||||||||||||||||||| |||||||||||    
T  5837978 gagcttctctggtgcagtcatcaaactgacttttttgaaaaggttaattttaattttaatgattgattcatttttaaattgttgattattgattaatgat 5837879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 646 - 728
Target Start/End: Complemental strand, 7693628 - 7693546
Alignment:
Q  646 gtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatga 728  Q
    |||| ||||||||||||| | |||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||    
T  7693628 gtcatgaaactgacttttctaaaaaagttaattttaattttaatgtttgattcatttttaaattgttgattactgattaatga 7693546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 651 - 729
Target Start/End: Original strand, 14919312 - 14919390
Alignment:
Q  651 gaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||    
T  14919312 gaaactgacttttttgaaaaaattaattttgatcttaatgtttgattcatttttaaattttagatttctgattaatgat 14919390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 627 - 729
Target Start/End: Complemental strand, 36860850 - 36860748
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    |||| ||||||| |||| |||||| ||| |||||||||| |||||||||||||| |||| |||| |||||||||||||||||||||||||||| ||| ||    
T  36860850 tgggtgcttctacggtgcagtcagaaaattgacttttttaaaaaagttaattttaatcttaatgcttgattcatttttaaattgttgattactaattcat 36860751  T
Q  727 gat 729  Q
    |||    
T  36860750 gat 36860748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 660 - 729
Target Start/End: Original strand, 35826268 - 35826337
Alignment:
Q  660 ttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  35826268 tttttttaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattattgattaatgat 35826337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 646 - 729
Target Start/End: Original strand, 30969091 - 30969175
Alignment:
Q  646 gtcaggaaactgacttttttgaaaa-agttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||| ||||||||||||||| |||| |||||||||| || | ||||||||||||||||||||||||| |||||||||||||||||    
T  30969091 gtcatgaaactgactttttttaaaaaagttaattttaattttaatgtttgattcatttttaaattgtggattactgattaatgat 30969175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 631 - 729
Target Start/End: Complemental strand, 5830314 - 5830216
Alignment:
Q  631 agcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgatt-catttttaaattgttgattactgattaatgat 729  Q
    |||||||| |||| |||||| ||| |||| |||| ||||| |||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||    
T  5830314 agcttctacggtgcagtcagaaaattgacattttggaaaa-gttaattttgattttaatgtttgatttcatttttaaattgttgattactgattaatgat 5830216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 627 - 729
Target Start/End: Complemental strand, 8467152 - 8467050
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    |||||| |||||||||| | |||  ||||||| |||||| ||||||||||||||  | | ||||||||||||||||||||| ||||||||||| ||||||    
T  8467152 tgggagtttctatggtgcaatcattaaactgattttttttaaaaagttaattttatttttaatgtttgattcatttttaaactgttgattactaattaat 8467053  T
Q  727 gat 729  Q
    |||    
T  8467052 gat 8467050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 501 - 610
Target Start/End: Complemental strand, 43225917 - 43225804
Alignment:
Q  501 aaaattaaaattaattcttaacaaacatctagtgtataagtttgtttggaaaatgaatcatatttgtgagtat---act--acatttgtcaatgctttcg 595  Q
    ||||||||||| ||||||| ||||| || ||||||||| ||||| |||  |||||||||||||||||||||||   |||  ||||||||||||||| |||    
T  43225917 aaaattaaaatcaattcttgacaaatatttagtgtata-gtttgattgataaatgaatcatatttgtgagtatgcaactcaacatttgtcaatgctatcg 43225819  T
Q  596 aaataaataaataaa 610  Q
    |||||||||||||||    
T  43225818 aaataaataaataaa 43225804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 630 - 729
Target Start/End: Original strand, 13956116 - 13956213
Alignment:
Q  630 gagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||||| |||| |||||| || |||| ||||||||||| |||||||||||| | |||||||||   |   |||||||||||||||||||||||||||    
T  13956116 gagcttctacggtgcagtcagaaagctgatttttttgaaaatgttaattttgattttaatgtttga--aaaagttaaattgttgattactgattaatgat 13956213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 624 - 671
Target Start/End: Complemental strand, 11898244 - 11898197
Alignment:
Q  624 ttatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaa 671  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||    
T  11898244 ttatgggagcttctacggtgcagtcaggaaactgacttttttgaaaaa 11898197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 628 - 678
Target Start/End: Original strand, 34853845 - 34853895
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaatt 678  Q
    |||||||||||||||| |||| ||||||||||||||||| |||||||||||    
T  34853845 gggagcttctatggtgcagtcgggaaactgacttttttggaaaagttaatt 34853895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 635 - 675
Target Start/End: Original strand, 12080405 - 12080445
Alignment:
Q  635 tctatggtgtagtcaggaaactgacttttttgaaaaagtta 675  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  12080405 tctatggtgtagtcaggaaattgacttttttgaaaaagtta 12080445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 628 - 683
Target Start/End: Original strand, 1428923 - 1428978
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgat 683  Q
    |||||||||||||||| | ||| |||||||||||||||| ||||||||||| ||||    
T  1428923 gggagcttctatggtgcactcatgaaactgacttttttggaaaagttaattatgat 1428978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 630 - 675
Target Start/End: Complemental strand, 21321132 - 21321087
Alignment:
Q  630 gagcttctatggtgtagtcaggaaactgacttttttgaaaaagtta 675  Q
    |||||||||||||| || ||| ||||||||||||||||||||||||    
T  21321132 gagcttctatggtgcagccagaaaactgacttttttgaaaaagtta 21321087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 276 - 372
Target Start/End: Complemental strand, 22668792 - 22668696
Alignment:
Q  276 gttgctagcttatggaatttggtttaagttatcatatttgtattcaaagtttaggtgtactgcaaatcctgttttaataggttttttctattgtatt 372  Q
    |||| ||| ||||| ||||||| |||| || ||||| |||| | ||||||||||||| |||||||||| |  |||| |||| ||||||| |||||||    
T  22668792 gttgttaggttatgtaatttggcttaaattctcatacttgtctccaaagtttaggtgcactgcaaatcataatttagtaggctttttctcttgtatt 22668696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 32021190 - 32021145
Alignment:
Q  185 aagaaatgatccgtaattggataggaaaaaagactttggattctca 230  Q
    ||||||| |||||||| ||||| |||||||||||| ||||||||||    
T  32021190 aagaaattatccgtaactggattggaaaaaagactgtggattctca 32021145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 186; Significance: 1e-100; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 44 - 462
Target Start/End: Original strand, 11896363 - 11896783
Alignment:
Q  44 ggtatcacacaaggtttgttggcctatatgaggatgaatctaggttcactaactttgccatttatcaactgatttttgtccagtgtgacaaagtgaacaa 143  Q
    ||||||||||||| ||| ||||||| |||||| ||||||| || ||||||| |||| || |||||||| || |||||||||||  |||||||||||||||    
T  11896363 ggtatcacacaagctttattggcctctatgagaatgaatccagtttcactaccttttccctttatcaattgttttttgtccagcatgacaaagtgaacaa 11896462  T
Q  144 atccgagaccatgtgtagtcgaaatgtgcgtgatgaggcagaagaaatgatccgtaattggataggaaaaaagactttggattctcacatctcctttatc 243  Q
    || |||||||| |||||||||||||| |||||||| ||  ||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||| ||    
T  11896463 attcgagaccaagtgtagtcgaaatgggcgtgatgtggttgaagaaatgatccgtaactggataggaaaaaagactcaggattctcacatctcctttgtc 11896562  T
Q  244 agcattagaagatggaagttgttgatgaatgagttgctagcttatggaatttggtttaagttatcatatttgtattcaaagtttaggtgtactgcaaatc 343  Q
    ||   |||||||||||||||||||||  ||| | || ||| ||||| ||||||| |||| || ||||| |||| | ||||||||||||||| ||||||||    
T  11896563 agttatagaagatggaagttgttgatagatggggtgttaggttatgtaatttggcttaaattctcatacttgtctccaaagtttaggtgtattgcaaatc 11896662  T
Q  344 ctgttttaataggttttttctattgtattggctcttcaaaattgttggggaataccctttcaaagttaactctagctgcttgta--actctctattttat 441  Q
     |  |||| |||| ||||||| ||||||||||||||||||||| ||||| ||||||| ||||| |||||| ||||||| |||||  | ||| | ||||||    
T  11896663 ataatttagtaggctttttctcttgtattggctcttcaaaattattgggaaataccccttcaatgttaacactagctgtttgtaatattctatgttttat 11896762  T
Q  442 ggaatgttaagctattgttta 462  Q
    | |||||||||||||||||||    
T  11896763 gaaatgttaagctattgttta 11896783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 46 - 467
Target Start/End: Complemental strand, 22793127 - 22792704
Alignment:
Q  46 tatcacacaaggtttgttggcctatatgaggatgaatctaggttcactaactttgccatttatcaactgatttttgtccagtgtgacaaagtgaacaaat 145  Q
    ||||| ||||| ||||||| | | |||||||||||||| |||||||    ||||||| ||||||  ||||||| ||||||| |||||| |||||| ||||    
T  22793127 tatcatacaagttttgttgccttttatgaggatgaatccaggttcaacccctttgccttttatcggctgatttctgtccagagtgacagagtgaaaaaat 22793028  T
Q  146 ccgagaccatgtgtagtcgaaatgtgcgtgatgaggcagaagaaatgatccgtaattggataggaaaaaagactttggattctcacatctcctttatcag 245  Q
    |||||||||  | ||||||||||||| ||| ||| ||  || |||| |||||||| ||||||||||||||||||||||||||||| ||||||||| |||     
T  22793027 ccgagaccaaatatagtcgaaatgtgtgtggtgaagccaaaaaaattatccgtaactggataggaaaaaagactttggattctcatatctcctttgtcac 22792928  T
Q  246 cattagaagatggaagttgttgatgaatgagttgctagcttatggaatttggtttaagttatcatatttgtattcaaagtttaggtgtactgcaaatcct 345  Q
    | |||||||||||||| ||||||||||||  ||| ||| || || | | || |  || || |||||||||| | ||||||||| ||||| || ||||| |    
T  22792927 ctttagaagatggaagatgttgatgaatggattgttaggttgtgaattatgatcaaatttctcatatttgtctacaaagtttatgtgtattgtaaatcat 22792828  T
Q  346 gttttaataggttttttctattgtattggctcttcaaaattgttggggaataccctttcaaagttaactctagctgcttgta--actctctattttatgg 443  Q
    |  ||| |||| | ||||| |||||||  ||||||||  ||||||| ||||  || ||||| || ||| |||| ||  ||||  | ||| | |||||||     
T  22792827 gaattagtaggctatttctcttgtattaactcttcaagtttgttggagaatgtcccttcaatgtcaacactagttggatgtaatattctatgttttatga 22792728  T
Q  444 aatgttaagctattgtttattgtc 467  Q
    ||||||||||| ||||||| ||||    
T  22792727 aatgttaagctcttgtttactgtc 22792704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 46 - 462
Target Start/End: Complemental strand, 25001999 - 25001581
Alignment:
Q  46 tatcacacaaggtttgttggcctatatgaggatgaatctaggttcactaactttgccatttatcaactgatttttgtccagtgtgacaaagtgaacaaat 145  Q
    ||||||||||| ||||||| | | |||||||||||||| || ||||    ||||||| ||||||   |||||  ||||||| ||||||||||||| ||||    
T  25001999 tatcacacaagttttgttgccatttatgaggatgaatccagattcaacccctttgccttttatcggttgattcctgtccagagtgacaaagtgaaaaaat 25001900  T
Q  146 ccgagaccatgtgtagtcgaaatgtgcgtgatgaggcagaagaaatgatccgtaattggataggaaaaaagactttggattctcacatctcctttatcag 245  Q
    |||||||||  | |||||||||||||  |||||| ||  || ||||||| ||||| |||||||||||||| ||||||||||||||| |||||||| ||      
T  25001899 ccgagaccaaatatagtcgaaatgtgtatgatgaagccaaaaaaatgattcgtaactggataggaaaaaatactttggattctcacgtctcctttgtctt 25001800  T
Q  246 cattagaagatggaagttgttgatgaatgagttgctagcttatggaatttggtttaagttatcatatttgtattcaaagtttaggtgtactgcaaatcct 345  Q
      |||||||||||||| |||||||||| |  ||| ||| || |  | | ||||| || ||||||||||||| | ||||||||| ||||| ||| |||| |    
T  25001799 ttttagaagatggaagatgttgatgaagggattgttaggttgtaaattatggttgaatttatcatatttgtctacaaagtttatgtgtattgcgaatcat 25001700  T
Q  346 gttttaataggttttttctattgtattggctcttcaaaattgttggggaataccctttcaaagttaactctagctgcttgta--actctctattttatgg 443  Q
    | | || |||| | ||||| ||||||||  |||| || ||| |||||||||  || | ||| || ||| ||||||| |||||  | ||||  |||||||     
T  25001699 gatctagtaggctatttctcttgtattgaatctttaagatttttggggaatgtccctccaatgtcaacactagctggttgtaatattctcggttttatga 25001600  T
Q  444 aatgttaagctattgttta 462  Q
    |||||||||||||||||||    
T  25001599 aatgttaagctattgttta 25001581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 630 - 729
Target Start/End: Complemental strand, 24212140 - 24212041
Alignment:
Q  630 gagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  24212140 gagcttctacggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgat 24212041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 627 - 729
Target Start/End: Complemental strand, 35353509 - 35353407
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||    
T  35353509 tgggagcttctaaggtgcagtcaggaaactgacttttttgaaaaagttaattttgatcttaatgttcgattcatttttaaattgttgattgctgattaat 35353410  T
Q  727 gat 729  Q
    |||    
T  35353409 gat 35353407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 626 - 729
Target Start/End: Complemental strand, 6546921 - 6546818
Alignment:
Q  626 atgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaa 725  Q
    ||||||||||||| |||| ||||| |||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||    
T  6546921 atgggagcttctacggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgattgattcatttttaaattgttgattactgattaa 6546822  T
Q  726 tgat 729  Q
    ||||    
T  6546821 tgat 6546818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 627 - 729
Target Start/End: Complemental strand, 7335194 - 7335092
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    ||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||| |||||||||    
T  7335194 tgggagcttctatggtgcagtcaggaaattgacttttttgaaaaaattaattttgatcttaatgtttgattcatttttaaattattgatttctgattaat 7335095  T
Q  727 gat 729  Q
    |||    
T  7335094 gat 7335092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 631 - 729
Target Start/End: Original strand, 9355590 - 9355688
Alignment:
Q  631 agcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||    
T  9355590 agcttctatggtgcaggcaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattattgattaatgat 9355688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 627 - 729
Target Start/End: Complemental strand, 38258980 - 38258878
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    |||||||||||| |||| |||||| ||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  38258980 tgggagcttctacggtgcagtcagaaaactgatttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaat 38258881  T
Q  727 gat 729  Q
    |||    
T  38258880 gat 38258878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 18797727 - 18797626
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||| |||| || |||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18797727 gggagcttttatgatgcagtcagaaaactgacttttttaaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactgattaatg 18797628  T
Q  728 at 729  Q
    ||    
T  18797627 at 18797626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 31520502 - 31520603
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||| ||||||||    
T  31520502 gggagcttctatggtgcagttaggaaactgacttttttgaaaaagttaattatgatcttaatgtttgattcatttttaaattgttaattacggattaatg 31520601  T
Q  728 at 729  Q
    ||    
T  31520602 at 31520603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 37703259 - 37703360
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||    
T  37703259 gggagcttctatggtgcagtcagtaaattgacttttttgaaaaagttaattttgatcttaatgtttaattcatttttaaattgttgattattgattaatg 37703358  T
Q  728 at 729  Q
    ||    
T  37703359 at 37703360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 626 - 729
Target Start/End: Original strand, 15612518 - 15612621
Alignment:
Q  626 atgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaa 725  Q
    ||||||||||||| |||| ||||| ||||||||||||||| |||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||    
T  15612518 atgggagcttctacggtgcagtcatgaaactgactttttttaaaaagttaattttaatcttaatgattgattcatttttaaattgttgattactgattaa 15612617  T
Q  726 tgat 729  Q
    ||||    
T  15612618 tgat 15612621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 26980706 - 26980605
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||| ||||||||    
T  26980706 gggagcttctaaggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgattgattcatttttaaattgttgattaccgattaatg 26980607  T
Q  728 at 729  Q
    ||    
T  26980606 at 26980605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 29173922 - 29173821
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| | || |||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||    
T  29173922 gggagcttctacgatgcagtcagaaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 29173823  T
Q  728 at 729  Q
    ||    
T  29173822 at 29173821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 634 - 729
Target Start/End: Original strand, 31578831 - 31578926
Alignment:
Q  634 ttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||| ||||||| |||||||||||    
T  31578831 ttctatggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttattgtttgattcatttttaaattattgattattgattaatgat 31578926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 627 - 729
Target Start/End: Original strand, 17842344 - 17842446
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    |||||||||||| |||| ||||| |||| ||||||||||| ||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||    
T  17842344 tgggagcttctacggtgcagtcaagaaattgacttttttggaaaagttaattttaattttaatgtttgattcatttttaaattgttgattactgattaat 17842443  T
Q  727 gat 729  Q
    |||    
T  17842444 gat 17842446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 8861685 - 8861584
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||| | |||| ||| | |||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||    
T  8861685 gggagcttcaacggtgcagtgatgaaactgacttttttgaaaaagttaattttaatcttagtgtttgattcatttttaaattgttgattactgattaatg 8861586  T
Q  728 at 729  Q
    ||    
T  8861585 at 8861584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 10358975 - 10359076
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| ||| | |||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||    
T  10358975 gggagcttctacggtgcagttaagaaactaacttttttgaaaaagttaattttgatcataatgtttgattcatttttaaattgttgattattgattaatg 10359074  T
Q  728 at 729  Q
    ||    
T  10359075 at 10359076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 26587853 - 26587954
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| || | | ||| |||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||    
T  26587853 gggagcttctacggcgcaatcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgatttatttttaaattgttgattactgattaatg 26587952  T
Q  728 at 729  Q
    ||    
T  26587953 at 26587954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 30055927 - 30055826
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| |||||||||| |||||||||||| ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||||    
T  30055927 gggagcttctacggtgcagtcaggaaattgacttttttgataaagttaattttgattttaacgattgattcatttttaaattgttgattactgattaatg 30055828  T
Q  728 at 729  Q
    ||    
T  30055827 at 30055826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 629 - 729
Target Start/End: Complemental strand, 32432851 - 32432751
Alignment:
Q  629 ggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatga 728  Q
    |||||||||| |||| ||||||||||||||||||||| ||||||||| |||| |||| ||||||||||||||||||||||||||||||| ||||| ||||    
T  32432851 ggagcttctacggtgcagtcaggaaactgacttttttaaaaaagttacttttaatcttaatgtttgattcatttttaaattgttgattattgattcatga 32432752  T
Q  729 t 729  Q
    |    
T  32432751 t 32432751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 645 - 729
Target Start/End: Original strand, 46480907 - 46480991
Alignment:
Q  645 agtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||| ||| |||||||||||||||||||||||||||||||    
T  46480907 agtcaggaaactgacttttttgaaaaagttaattatgatcttaatgttttatttatttttaaattgttgattactgattaatgat 46480991  T

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Target: chr7; HSP #24
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 627 - 729
Target Start/End: Original strand, 12390409 - 12390511
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    |||||||||||| |||| |||||||||| ||||||||||| |||||||||||||||||| |||||||  ||||||||||||||||  |||||||||||||    
T  12390409 tgggagcttctacggtgaagtcaggaaattgacttttttggaaaagttaattttgatcttaatgtttatttcatttttaaattgtcaattactgattaat 12390508  T
Q  727 gat 729  Q
    |||    
T  12390509 gat 12390511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 628 - 722
Target Start/End: Complemental strand, 21992027 - 21991933
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgat 722  Q
    ||||||||||| |||||| ||| |||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| ||||    
T  21992027 gggagcttctacggtgtaatcatgaaactgacttttttgaaaaggttaattttaatcttaatgtttgattcatttttaaattgttgattaatgat 21991933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 631 - 729
Target Start/End: Complemental strand, 23111589 - 23111491
Alignment:
Q  631 agcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||| |||  |||||| |||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  23111589 agcttctacggtacagtcagaaaactgacttttttaaaaaagttaactttgatcttaatgtttgattcatttttaaattgttgattactgatttatgat 23111491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 627 - 729
Target Start/End: Complemental strand, 37110275 - 37110173
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    |||||||||||| |||| ||||| |||| ||| ||||||| ||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||    
T  37110275 tgggagcttctacggtgcagtcaagaaattgatttttttggaaaagttaattttaattttaatgtttgattcatttttaaattgttgattactgattaat 37110176  T
Q  727 gat 729  Q
    |||    
T  37110175 gat 37110173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 631 - 727
Target Start/End: Original strand, 44411304 - 44411400
Alignment:
Q  631 agcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||| ||||||| |||||||||||| ||||||||| ||| ||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||    
T  44411304 agcttatatggtgcagtcaggaaactaacttttttggaaaggttaattatgatcttaatgtttcattcatttttaaattgttgattactgattaatg 44411400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 650 - 729
Target Start/End: Complemental strand, 37347399 - 37347320
Alignment:
Q  650 ggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  37347399 ggaaactgacttttttgaaaaagttaattatgatcttaatgtttgattcatttttaaattgttaattacggattaatgat 37347320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 626 - 729
Target Start/End: Original strand, 41764837 - 41764940
Alignment:
Q  626 atgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaa 725  Q
    ||||||| ||||| |||| |||| ||||| ||||||||||||||| |||||||||||||| |||||| | ||||||||||||||||||||| ||||||||    
T  41764837 atgggagtttctacggtggagtcgggaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaa 41764936  T
Q  726 tgat 729  Q
    ||||    
T  41764937 tgat 41764940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 4583319 - 4583218
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| || ||| ||| ||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||| ||||||| |||    
T  4583319 gggagcttctacggtgcagccagaaaattgacttttttgaaaaagttaattttaatcttaatgtttaattcatttttaaattgttgatgactgattcatg 4583220  T
Q  728 at 729  Q
    ||    
T  4583219 at 4583218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 637 - 725
Target Start/End: Complemental strand, 10481996 - 10481908
Alignment:
Q  637 tatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaa 725  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||| ||| ||| ||| |||||||||||||| ||||||||||||    
T  10481996 tatggtgcagtcagaaaactgacttttttgaaaaagttaattttgatcttaatatttaatttatttttaaattgttaattactgattaa 10481908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 624 - 722
Target Start/End: Original strand, 15672514 - 15672614
Alignment:
Q  624 ttatgggagcttctat--ggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactga 721  Q
    |||||||||||||||   |||| ||||||||||||||||||||||||||| |||||||| | || ||||||| ||||||||||||||||||||||| |||    
T  15672514 ttatgggagcttctacagggtgcagtcaggaaactgacttttttgaaaaaattaattttaaccttaatgtttaattcatttttaaattgttgattattga 15672613  T
Q  722 t 722  Q
    |    
T  15672614 t 15672614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 660 - 729
Target Start/End: Complemental strand, 22687599 - 22687530
Alignment:
Q  660 ttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||    
T  22687599 ttttttgaaaaagttaattttaatcttaatgtatgattcatttttaaattgttgattactgattaatgat 22687530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 37704582 - 37704481
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||| ||||||| |||||||||| ||||||||||| ||||  |||| ||||| | |||||||||||||||| |||||||||||||||| |||||||    
T  37704582 gggagcttttatggtgcagtcaggaaattgacttttttggaaaaactaatcttgattttaatgtttgattcatttgtaaattgttgattactaattaatg 37704483  T
Q  728 at 729  Q
    ||    
T  37704482 at 37704481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 210 - 454
Target Start/End: Complemental strand, 24437331 - 24437085
Alignment:
Q  210 aaaaaagactttggattctcacatctcctttatcagcattagaagatggaagttgttgatgaatgagttgctagcttatggaatttggtttaagttatca 309  Q
    |||||| |||||||||||||||||||||||| | |||| |||||||| ||||||||||||||| | |||| ||| ||||  |||||||||||  || | |    
T  24437331 aaaaaatactttggattctcacatctcctttgttagcagtagaagatagaagttgttgatgaaagggttgttaggttataaaatttggtttattttctta 24437232  T
Q  310 tatttgtattcaaagtttaggtgtactgcaaatcctgttttaataggttttttctattgtattggctcttcaaaattgttggggaataccctttcaaagt 409  Q
     | |||| | ||||||||| ||||  || ||| | || | |  ||| |||||||| ||||  | |||||||||||| | |||||||| ||| ||||| ||    
T  24437231 cacttgtctacaaagtttatgtgtcttgaaaagcatgatgttgtagattttttctcttgtcctagctcttcaaaatggatggggaatgccccttcaatgt 24437132  T
Q  410 taactctagctgcttgtaa-ctc-tctattttatggaatgttaagct 454  Q
    |||| |||| || ||||||  || ||||||||||| |||||||||||    
T  24437131 taacactagttgtttgtaatatcttctattttatgaaatgttaagct 24437085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 627 - 729
Target Start/End: Original strand, 48928057 - 48928159
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    |||||||||||| |||| ||| || ||| |||||||||| ||||| ||||||||||||| |||||| |||| ||||||||||||||||||  ||||||||    
T  48928057 tgggagcttctacggtgcagttagaaaattgacttttttaaaaaaattaattttgatctaaatgttcgatttatttttaaattgttgattgttgattaat 48928156  T
Q  727 gat 729  Q
    |||    
T  48928157 gat 48928159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 660 - 729
Target Start/End: Original strand, 25691337 - 25691406
Alignment:
Q  660 ttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||| ||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  25691337 ttttttaaaaaatttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgat 25691406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 660 - 729
Target Start/End: Original strand, 32820846 - 32820915
Alignment:
Q  660 ttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||    
T  32820846 tttttttaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattattgatgaatgat 32820915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 629 - 729
Target Start/End: Complemental strand, 27284145 - 27284043
Alignment:
Q  629 ggagcttctatggtgtagtcaggaaactgacttttttgaaaaag-ttaattttgatctgaatgtttgattc-atttttaaattgttgattactgattaat 726  Q
    |||||||||| |||| |||||||||| ||||||||||  ||||| ||||||||||| | |||||||||||  ||||||||||| ||||||||||||||||    
T  27284145 ggagcttctacggtgcagtcaggaaattgactttttttgaaaagattaattttgattttaatgtttgattttatttttaaattattgattactgattaat 27284046  T
Q  727 gat 729  Q
    |||    
T  27284045 gat 27284043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 656 - 729
Target Start/End: Original strand, 32592996 - 32593068
Alignment:
Q  656 tgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||||||||||||||||||||||||| ||||||  ||||| |||||||||||||||| ||||||||||||    
T  32592996 tgacttttttgaaaaagttaattttgatcttaatgttcaattca-ttttaaattgttgattgctgattaatgat 32593068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 664 - 729
Target Start/End: Complemental strand, 43925459 - 43925394
Alignment:
Q  664 ttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  43925459 ttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattagtgattcatgat 43925394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 651 - 729
Target Start/End: Original strand, 5657264 - 5657343
Alignment:
Q  651 gaaactgacttttttgaaaaagttaattttgatc-tgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||||| |||||||||||||||||||| ||| | |||| || ||||||||||||||| ||||||||| |||||||||    
T  5657264 gaaactgacatttttgaaaaagttaattttaatctttaatgatttattcatttttaaatttttgattactcattaatgat 5657343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 658 - 729
Target Start/End: Original strand, 34361967 - 34362040
Alignment:
Q  658 acttttttgaaaaagttaattttga-tctg-aatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||||||||||||||||||| | |||  |||||||||||||||||||||||||| || |||||||||||||    
T  34361967 acttttttgaaaaagttaattttaaatctttaatgtttgattcatttttaaattgttaatgactgattaatgat 34362040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 628 - 717
Target Start/End: Complemental strand, 44599066 - 44598978
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgatta 717  Q
    ||||| ||||| |||| ||||| |||||||| |||||||||||| |||||||| |||| || | |||||||| |||||||||||||||||    
T  44599066 gggagtttctacggtgcagtcatgaaactgatttttttgaaaaaattaattttaatcttaacgattgattca-ttttaaattgttgatta 44598978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 673 - 729
Target Start/End: Complemental strand, 11071558 - 11071502
Alignment:
Q  673 ttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||| |||| | ||||||||||||||||||||||||||||||| |||||||||||    
T  11071558 ttaattatgattttaatgtttgattcatttttaaattgttgattaatgattaatgat 11071502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 626 - 702
Target Start/End: Complemental strand, 12166291 - 12166215
Alignment:
Q  626 atgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcattt 702  Q
    |||||||||||||   || ||||| ||||||||||||| | |||||||||||||| |||| ||||||||||||||||    
T  12166291 atgggagcttctacactgcagtcatgaaactgacttttctaaaaaagttaattttaatcttaatgtttgattcattt 12166215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 624 - 673
Target Start/End: Complemental strand, 8759624 - 8759575
Alignment:
Q  624 ttatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagt 673  Q
    ||||||| ||||||||||||||| || |||| ||||||||||||||||||    
T  8759624 ttatgggggcttctatggtgtagccaagaaaatgacttttttgaaaaagt 8759575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 627 - 675
Target Start/End: Complemental strand, 4902705 - 4902657
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagtta 675  Q
    |||| |||||||||||| |||||| ||| ||||||||||||||||||||    
T  4902705 tgggggcttctatggtgaagtcagaaaattgacttttttgaaaaagtta 4902657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 697 - 729
Target Start/End: Complemental strand, 12166074 - 12166042
Alignment:
Q  697 tcatttttaaattgttgattactgattaatgat 729  Q
    |||||||||||||||||||||||||||||||||    
T  12166074 tcatttttaaattgttgattactgattaatgat 12166042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 20369549 - 20369595
Alignment:
Q  210 aaaaaagactttggattctcacatctcctttatcagcattagaagat 256  Q
    |||||||||||||||||||| |||||||||  | |||||||||||||    
T  20369549 aaaaaagactttggattctctcatctccttcgtaagcattagaagat 20369595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 628 - 693
Target Start/End: Original strand, 33688053 - 33688118
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgttt 693  Q
    |||||||||||  ||| ||||  ||||||||||||||| |||||||||||||| || | |||||||    
T  33688053 gggagcttctacagtgcagtcgtgaaactgacttttttaaaaaagttaattttaattttaatgttt 33688118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 158; Significance: 2e-83; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 158; E-Value: 2e-83
Query Start/End: Original strand, 96 - 462
Target Start/End: Original strand, 49722982 - 49723350
Alignment:
Q  96 ctttgccatttatcaactgatttttgtccagtgtgacaaagtgaacaaatccgagaccatgtgtagtcgaaatgtgcgtgatgaggcagaagaaatgatc 195  Q
    ||||||| |||||||||||||||||||||||  ||| |||||||||||||||||||||| || ||||| ||| | ||||||||| ||  || | ||||||    
T  49722982 ctttgccttttatcaactgatttttgtccagcatgataaagtgaacaaatccgagaccaagtttagtcaaaacgcgcgtgatgaagccaaaaatatgatc 49723081  T
Q  196 cgtaattggataggaaaaaagactttggattctcacatctcctttatcagcattagaagatggaagttgttgatgaatgagttgctagcttatggaattt 295  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||| |||| ||| ||||| | |||    
T  49723082 cgtaactggataggaaaaaagactttggattctcacatcttctttatcagcattagaagatgaaagctgttgatgaatgggttgttaggttatgaatttt 49723181  T
Q  296 ggtttaagttatcatatttgtattcaaagtttaggtgtactgcaaatcctgttttaataggttttttctattgtattggctcttcaaaattgttggggaa 395  Q
    ||||||| || |||||||||| | ||||||||| ||||  |||||||| || | |  |||| ||||||| ||||| ||| ||||||||||||||||||||    
T  49723182 ggtttaatttctcatatttgtctgcaaagtttatgtgttttgcaaatcatgctcttgtaggatttttcttttgtactggatcttcaaaattgttggggaa 49723281  T
Q  396 taccctttcaaagttaactctagctgcttgtaa--ctctctattttatggaatgttaagctattgttta 462  Q
    |  || ||||| |||||| ||| ||||||||||   ||||||| ||||| |||| ||||||| ||||||    
T  49723282 tgtcccttcaatgttaacgctatctgcttgtaatgttctctatgttatgaaatgctaagctagtgttta 49723350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 70 - 467
Target Start/End: Original strand, 27429663 - 27430063
Alignment:
Q  70 tatgaggatgaatctaggttcactaactttgccatttatcaactgatttttgtccagtgtgacaaagtgaacaaatccgagaccatgtgtagtcgaaatg 169  Q
    |||||||||||||| |||||||    ||||||| ||||||  ||||||| ||||||| ||||||||||||| |||||||||||||  | |||||||||||    
T  27429663 tatgaggatgaatccaggttcaacccctttgccttttatcggctgatttctgtccagagtgacaaagtgaaaaaatccgagaccaaatatagtcgaaatg 27429762  T
Q  170 tgcgtgatgaggcagaagaaatgatccgtaattggataggaaaaaagactttggattctcacatctcctttatcagcattagaagatggaagttgttgat 269  Q
    |||||||||| ||  || ||||||||||||| ||||||| ||||||||| ||||||||||||||||||||| ||| | |||||||||||||| |||||||    
T  27429763 tgcgtgatgaagccaaaaaaatgatccgtaactggatagaaaaaaagacattggattctcacatctcctttgtcacctttagaagatggaagatgttgat 27429862  T
Q  270 gaatgagttgctagcttatggaatttggtttaagttatcata-tttgtattcaaagtttaggtgtactgcaaatcctgttttaataggttttttctattg 368  Q
    |||||  ||| ||| || || | | ||||  || || ||||| ||||| | ||||||||| ||||| || ||||| ||  ||| |||||| ||||| |||    
T  27429863 gaatggattgttaggttgtgaattatggtcgaatttctcatattttgtctacaaagtttatgtgtattgtaaatcatgaattagtaggttatttctcttg 27429962  T
Q  369 tattggctcttcaaaattgttggggaataccctttcaaagttaactctagctgcttgta--actctctattttatggaatgttaagctattgtttattgt 466  Q
    ||||| ||||||||  ||||||||||||  || ||||| || ||  |||||||  ||||  | ||| | ||||||| ||||||||||| ||||||| |||    
T  27429963 tattgactcttcaagtttgttggggaatgtcccttcaatgtcaatactagctggatgtaatattctatgttttatgaaatgttaagctcttgtttactgt 27430062  T
Q  467 c 467  Q
    |    
T  27430063 c 27430063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 630 - 729
Target Start/End: Original strand, 20373025 - 20373124
Alignment:
Q  630 gagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  20373025 gagcttctatggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgat 20373124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 629 - 729
Target Start/End: Complemental strand, 39283067 - 39282967
Alignment:
Q  629 ggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatga 728  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  39283067 ggagcttctacggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatga 39282968  T
Q  729 t 729  Q
    |    
T  39282967 t 39282967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 627 - 729
Target Start/End: Complemental strand, 4015876 - 4015774
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    |||||||||||| |||| ||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  4015876 tgggagcttctacggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaat 4015777  T
Q  727 gat 729  Q
    |||    
T  4015776 gat 4015774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 624 - 726
Target Start/End: Complemental strand, 21194027 - 21193925
Alignment:
Q  624 ttatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgatt 723  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  21194027 ttatgggagcttctacggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgatt 21193928  T
Q  724 aat 726  Q
    |||    
T  21193927 aat 21193925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 628 - 726
Target Start/End: Original strand, 40552019 - 40552117
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    ||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  40552019 gggagcttctacggtgcagtctggaaactgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactgattaat 40552117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 627 - 729
Target Start/End: Complemental strand, 48355358 - 48355256
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    ||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  48355358 tgggagcttctatggtgcagttaggaaattgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgcttactgattaat 48355259  T
Q  727 gat 729  Q
    |||    
T  48355258 gat 48355256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 3362671 - 3362570
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||||||||||| |||||||||| ||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  3362671 gggagcttctatggtgcagtcaggaaattgacttttttggaaaagttaattatgatcttaatgtttgattcatttttaaattgttgattactgattaatg 3362572  T
Q  728 at 729  Q
    ||    
T  3362571 at 3362570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 37158124 - 37158023
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  37158124 gggagcttctacggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactcattaatg 37158025  T
Q  728 at 729  Q
    ||    
T  37158024 at 37158023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 37203484 - 37203383
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  37203484 gggagcttctacggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactcattaatg 37203385  T
Q  728 at 729  Q
    ||    
T  37203384 at 37203383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 635 - 729
Target Start/End: Complemental strand, 1090102 - 1090008
Alignment:
Q  635 tctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  1090102 tctacggtgtagtcaggaaactgacttttttaaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattattgattaatgat 1090008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 616 - 729
Target Start/End: Original strand, 33378533 - 33378646
Alignment:
Q  616 caatttagttatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgat 715  Q
    ||||||| || |||||||||||| |||| ||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||| ||||||    
T  33378533 caatttaattttgggagcttctacggtgcagtcaggaaactgacttttttgaaaaaattaattttaatcttaatgtttgattcatttttaaatcgttgat 33378632  T
Q  716 tactgattaatgat 729  Q
    || |||||||||||    
T  33378633 tattgattaatgat 33378646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 629 - 729
Target Start/End: Original strand, 22445826 - 22445926
Alignment:
Q  629 ggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatga 728  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||    
T  22445826 ggagcttctatagtgcagtcaggaaactgacttttttggaaaagttaattatgatcttaatgtttgattcatatttaaattgttgattactgattaatga 22445925  T
Q  729 t 729  Q
    |    
T  22445926 t 22445926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 626 - 729
Target Start/End: Original strand, 21009559 - 21009662
Alignment:
Q  626 atgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaa 725  Q
    ||||||| ||||| |||| ||||||||||||||||||||| ||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  21009559 atgggagtttctacggtgcagtcaggaaactgacttttttaaaaaaattaattttgattttaatgtttgattcatttttaaattgttgattactgattaa 21009658  T
Q  726 tgat 729  Q
    ||||    
T  21009659 tgat 21009662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 22622478 - 22622579
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||| || |||| |||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||    
T  22622478 gggagcttttacggtgcagtcaggaaactgatttttttgaaaaagttaattttgattttaatgtttgattcatttttaaatagttgattactgattaatg 22622577  T
Q  728 at 729  Q
    ||    
T  22622578 at 22622579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 26941020 - 26941121
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| |||||| |||||||||||||||||||||||||||||||| | || | ||||||||||||||||||||||||||||||||||||    
T  26941020 gggagcttctacggtgcagtcagaaaactgacttttttgaaaaagttaattttgattttaacgcttgattcatttttaaattgttgattactgattaatg 26941119  T
Q  728 at 729  Q
    ||    
T  26941120 at 26941121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 46297522 - 46297623
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| |||||  |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  46297522 gggagcttctacggtgcagtcaaaaaactgacttttttaaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactaattaatg 46297621  T
Q  728 at 729  Q
    ||    
T  46297622 at 46297623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 53228912 - 53229013
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| ||||||| |||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  53228912 gggagcttctacggtgcagtcaggcaactgatttttttggaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattattgattaatg 53229011  T
Q  728 at 729  Q
    ||    
T  53229012 at 53229013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 630 - 729
Target Start/End: Complemental strand, 47481937 - 47481838
Alignment:
Q  630 gagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||||| |||  |||||||||| ||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  47481937 gagcttctacggtacagtcaggaaattgatttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgat 47481838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 634 - 729
Target Start/End: Complemental strand, 54506218 - 54506123
Alignment:
Q  634 ttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||| |||| |||||||||| ||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  54506218 ttctacggtgcagtcaggaaattgatttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgat 54506123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 628 - 730
Target Start/End: Original strand, 11356918 - 11357020
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||| |||| |||| ||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||    
T  11356918 gggagcatctacggtgcagtcagacaactgacttttttgaaaaagttaattttgatcttaatgttggattcatttttaaattgttgattactaattaatg 11357017  T
Q  728 atg 730  Q
    |||    
T  11357018 atg 11357020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 632 - 729
Target Start/End: Original strand, 11357145 - 11357242
Alignment:
Q  632 gcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||| | || ||||||  |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11357145 gcttctacgatgcagtcagacaactgacttttttggaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactgattaatgat 11357242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 14586440 - 14586541
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||||||||||| | ||  ||||||||||||||||||||| |||||||| |||| ||||||||||| |||||||||||||||||||||||||||||    
T  14586440 gggagcttctatggtgcactcgtgaaactgacttttttgaaaaaattaattttaatcttaatgtttgatttatttttaaattgttgattactgattaatg 14586539  T
Q  728 at 729  Q
    ||    
T  14586540 at 14586541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 630 - 729
Target Start/End: Original strand, 42505837 - 42505936
Alignment:
Q  630 gagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||||| |||| |||||||||| |||||||||||| ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||||||    
T  42505837 gagcttctacggtgcagtcaggaaattgacttttttgataaagttaattttgattttaacgattgattcatttttaaattgttgattactgattaatgat 42505936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 627 - 729
Target Start/End: Complemental strand, 2008356 - 2008254
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    ||||||||| || |||| | ||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||| |    
T  2008356 tgggagcttttacggtgcaatcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattaatgattact 2008257  T
Q  727 gat 729  Q
    |||    
T  2008256 gat 2008254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 29099763 - 29099661
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgactttttt-gaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    ||||||||||| |||| ||||| ||||||||||||||| ||||||||||||||| || | |||||||||||||||||||||||||||||| |||||||||    
T  29099763 gggagcttctacggtgcagtcatgaaactgactttttttgaaaaagttaattttaatattaatgtttgattcatttttaaattgttgattgctgattaat 29099664  T
Q  727 gat 729  Q
    |||    
T  29099663 gat 29099661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 36012556 - 36012454
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaa-ttttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||||| |||| || | ||||||||||| ||||||||||||||||||||||||||||    
T  36012556 gggagcttctacggtgcagtcatgaaactgacttttttgaaaaagttaaattttaattttaatgtttgatttatttttaaattgttgattactgattaat 36012457  T
Q  727 gat 729  Q
    |||    
T  36012456 gat 36012454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 52040682 - 52040783
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| | || |||||   |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  52040682 gggagcttctacgctgcagtcatacaactgacttttttggaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactcattaatg 52040781  T
Q  728 at 729  Q
    ||    
T  52040782 at 52040783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 651 - 729
Target Start/End: Complemental strand, 33698546 - 33698468
Alignment:
Q  651 gaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||||||||||||||||||||||||| |||| ||||  |||||||||||||||||||||||||||||||||||||    
T  33698546 gaaactgacttttttgaaaaagttaattttaatcttaatgactgattcatttttaaattgttgattactgattaatgat 33698468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 43975652 - 43975753
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||| ||||| |||| |||||| ||||||||| |||||||||| ||||| ||||||| |||||| ||||||||||||||||||||||| ||||||||||    
T  43975652 gggagtttctacggtgcagtcagaaaactgactcttttgaaaaaattaatcttgatcttaatgttcgattcatttttaaattgttgattgctgattaatg 43975751  T
Q  728 at 729  Q
    ||    
T  43975752 at 43975753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 652 - 729
Target Start/End: Complemental strand, 44891889 - 44891812
Alignment:
Q  652 aaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||||||||| |||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||    
T  44891889 aaactgacttttttaaaaaagttaattttaatcttaatgattgattcatttttaaattgttgattactgattaatgat 44891812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 645 - 729
Target Start/End: Original strand, 24707892 - 24707976
Alignment:
Q  645 agtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||| ||| ||| ||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||    
T  24707892 agtcagaaaattgatttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgttgattactgattaatgat 24707976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 628 - 722
Target Start/End: Complemental strand, 11467226 - 11467132
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgat 722  Q
    ||||||||||| |||| |||||  |||||||||||||||||||||||||||||  ||| |||| |||||||||||||||||||||||||| ||||    
T  11467226 gggagcttctacggtgcagtcatcaaactgacttttttgaaaaagttaattttattcttaatgattgattcatttttaaattgttgattaatgat 11467132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 646 - 729
Target Start/End: Original strand, 44186295 - 44186378
Alignment:
Q  646 gtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||| |||| ||| ||||| ||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  44186295 gtcatgaaattgattttttcgaaaatgttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgat 44186378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 632 - 729
Target Start/End: Original strand, 4761412 - 4761509
Alignment:
Q  632 gcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||| ||| | ||| |||| | |||||||| ||||||||||||||||| | ||||||||||||||||| |||||||||||| ||||||||||||    
T  4761412 gcttctatagtgcattcaagaaagttactttttttaaaaagttaattttgattttaatgtttgattcattttcaaattgttgatttctgattaatgat 4761509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 618 - 714
Target Start/End: Complemental strand, 35844673 - 35844577
Alignment:
Q  618 atttagttatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttga 714  Q
    ||||| |||||||||||| || |||| ||| | |||| ||||||||||||||||||||||||| || | ||||||||||| ||||||||||||||||    
T  35844673 atttatttatgggagcttttacggtgcagttatgaaattgacttttttgaaaaagttaattttaattttaatgtttgatttatttttaaattgttga 35844577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 662 - 729
Target Start/End: Complemental strand, 22451350 - 22451283
Alignment:
Q  662 ttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||| |||||| ||||||||||||    
T  22451350 ttttgaaaaagttaattttgatcttaatgttcgattcatttttaaatttttgattgctgattaatgat 22451283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 627 - 729
Target Start/End: Original strand, 51212536 - 51212632
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    ||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| |||      |||||||||||||||||||||  | ||||||    
T  51212536 tgggagcttctatggtgcagtcagaaaactgacatttttgaaaaagttaattttgatcttaat------ttcatttttaaattgttgatttttaattaat 51212629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 663 - 729
Target Start/End: Complemental strand, 50475199 - 50475133
Alignment:
Q  663 tttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||||| ||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||    
T  50475199 tttgaaaaatttaattttgattttaatgtttgattcatttttaaattattgattactgattaatgat 50475133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 660 - 729
Target Start/End: Original strand, 7327274 - 7327343
Alignment:
Q  660 ttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||| |||||||||||||| |||| |||  ||||||||||||||||||||||||||||||||||||||    
T  7327274 ttttttaaaaaagttaattttaatcttaataattgattcatttttaaattgttgattactgattaatgat 7327343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 656 - 729
Target Start/End: Complemental strand, 40936361 - 40936288
Alignment:
Q  656 tgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||||||||||||||||||||  |||| |||| |||||| |||||||||||||||||||| ||||||||||    
T  40936361 tgacttttttgaaaaagttaatttcaatcttaatgattgatttatttttaaattgttgattaccgattaatgat 40936288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 652 - 726
Target Start/End: Original strand, 3654983 - 3655058
Alignment:
Q  652 aaactgacttttttgaaaaagttaattttgatctgaatgtttga-ttcatttttaaattgttgattactgattaat 726  Q
    ||||||| ||||||||||| |||||||||||| | ||||||||| || ||||||||||||||||||||||||||||    
T  3654983 aaactgatttttttgaaaatgttaattttgattttaatgtttgattttatttttaaattgttgattactgattaat 3655058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 627 - 729
Target Start/End: Original strand, 24488720 - 24488823
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgactttt-ttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaa 725  Q
    |||||||||||| | |||| | |||||| |||||||| || |||||||||||||| || | ||||||||||||||||||||||| ||||||| ||||| |    
T  24488720 tgggagcttctacgatgtaatgaggaaattgacttttatttaaaaagttaattttaatattaatgtttgattcatttttaaattattgattattgattca 24488819  T
Q  726 tgat 729  Q
    ||||    
T  24488820 tgat 24488823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 652 - 722
Target Start/End: Complemental strand, 29164194 - 29164124
Alignment:
Q  652 aaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgat 722  Q
    |||||||||||| | |||||||||||||| |||| ||||||||||| ||||||||||||||||||| ||||    
T  29164194 aaactgacttttctaaaaaagttaattttaatcttaatgtttgatttatttttaaattgttgattaatgat 29164124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 32373885 - 32373785
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||  ||||  |||||||| ||||||||||||||||||||| |||| | || |  ||||| |||||||||||||||||||||||||||    
T  32373885 gggagcttctacggtacagtcgtgaaactgaattttttgaaaaagttaattttaatcttattgatgaattca-ttttaaattgttgattactgattaatg 32373787  T
Q  728 at 729  Q
    ||    
T  32373786 at 32373785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 651 - 729
Target Start/End: Complemental strand, 25580132 - 25580054
Alignment:
Q  651 gaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||| |||||||||| ||||||||||| || |||| |||| ||| ||||||||||||||||||||| | ||||||||||    
T  25580132 gaaattgacttttttaaaaaagttaatcttaatcttaatgattggttcatttttaaattgttgattgcggattaatgat 25580054  T

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Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 629 - 690
Target Start/End: Complemental strand, 34133373 - 34133312
Alignment:
Q  629 ggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatg 690  Q
    |||||||||| |||| ||| |||||||||||||||||||||||||||||||| |||| ||||    
T  34133373 ggagcttctaaggtgcagttaggaaactgacttttttgaaaaagttaattttaatcttaatg 34133312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 691 - 729
Target Start/End: Complemental strand, 38592051 - 38592013
Alignment:
Q  691 tttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||||||||||||||||||||||||||||||||||    
T  38592051 tttgattcatttttaaattgttgattactgattaatgat 38592013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 649 - 726
Target Start/End: Original strand, 27480139 - 27480216
Alignment:
Q  649 aggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    |||||| ||| |||||| |||||  |||||||| ||| |||||| ||||||||||||||||||||||  |||||||||    
T  27480139 aggaaattgattttttttaaaaatataattttgttcttaatgttcgattcatttttaaattgttgatcgctgattaat 27480216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 625 - 683
Target Start/End: Complemental strand, 13498736 - 13498678
Alignment:
Q  625 tatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgat 683  Q
    |||| |||||||||  |||||||||| ||| |||||||||| |||||||||||||||||    
T  13498736 tatgagagcttctacagtgtagtcagaaaattgacttttttaaaaaagttaattttgat 13498678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 613 - 675
Target Start/End: Original strand, 42663971 - 42664033
Alignment:
Q  613 ttacaatttagttatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagtta 675  Q
    ||||| |||| ||| ||| |||||||||||||||||| |||| ||||||||| ||||||||||    
T  42663971 ttacattttaattaagggggcttctatggtgtagtcaagaaaatgactttttagaaaaagtta 42664033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 629 - 699
Target Start/End: Complemental strand, 45174889 - 45174819
Alignment:
Q  629 ggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattca 699  Q
    |||||||||  ||||||||||  |||||| |||||||||||||||||||||| || | ||||||| |||||    
T  45174889 ggagcttcttcggtgtagtcatcaaactggcttttttgaaaaagttaattttaattttaatgtttaattca 45174819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 634 - 675
Target Start/End: Complemental strand, 5125597 - 5125556
Alignment:
Q  634 ttctatggtgtagtcaggaaactgacttttttgaaaaagtta 675  Q
    |||||||||||||||| |||| ||||||||||||||||||||    
T  5125597 ttctatggtgtagtcaagaaaatgacttttttgaaaaagtta 5125556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 628 - 683
Target Start/End: Complemental strand, 38592101 - 38592046
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgat 683  Q
    ||||||||| | |||| ||| | |||| ||||||||||||||||||||||||||||    
T  38592101 gggagcttcaacggtgcagttaagaaattgacttttttgaaaaagttaattttgat 38592046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 691 - 729
Target Start/End: Complemental strand, 34133288 - 34133250
Alignment:
Q  691 tttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  34133288 tttgattcatttttaaattgttgattaccgattcatgat 34133250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 660 - 702
Target Start/End: Complemental strand, 43348598 - 43348556
Alignment:
Q  660 ttttttgaaaaagttaattttgatctgaatgtttgattcattt 702  Q
    ||||||||||||||||||||| |||| |||| |||||||||||    
T  43348598 ttttttgaaaaagttaattttaatcttaatgattgattcattt 43348556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 632 - 673
Target Start/End: Complemental strand, 54608025 - 54607984
Alignment:
Q  632 gcttctatggtgtagtcaggaaactgacttttttgaaaaagt 673  Q
    |||||||||||||||| | |||| ||||||||||||||||||    
T  54608025 gcttctatggtgtagttaagaaaatgacttttttgaaaaagt 54607984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 137; Significance: 5e-71; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 44 - 332
Target Start/End: Complemental strand, 986 - 698
Alignment:
Q  44 ggtatcacacaaggtttgttggcctatatgaggatgaatctaggttcactaactttgccatttatcaactgatttttgtccagtgtgacaaagtgaacaa 143  Q
    ||||||||||||| ||| ||||||| |||| | ||||||| || ||||||| ||||||  || ||||| ||||||||||||||  |||||||||||||||    
T  986 ggtatcacacaagctttattggcctctatgggaatgaatccagtttcactacctttgcacttcatcaattgatttttgtccagcatgacaaagtgaacaa 887  T
Q  144 atccgagaccatgtgtagtcgaaatgtgcgtgatgaggcagaagaaatgatccgtaattggataggaaaaaagactttggattctcacatctcctttatc 243  Q
    ||||||||||| |||||||||||||| |||||||| ||  ||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| ||    
T  886 atccgagaccaagtgtagtcgaaatgggcgtgatgtggttgaagatatgatccgtaattggatagaaaaaaagactctggattctcacatctcctttgtc 787  T
Q  244 agcattagaagatggaagttgttgatgaatgagttgctagcttatggaatttggtttaagttatcatatttgtattcaaagtttaggtg 332  Q
    ||   ||||||||||||| |||||||| ||| |||| ||| ||||| ||||||| |||| || || ||||||| | |||||||||||||    
T  786 aggtatagaagatggaagctgttgatggatgggttgttaggttatgtaatttggcttaaattctcgtatttgtctccaaagtttaggtg 698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 2e-58; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 44 - 327
Target Start/End: Original strand, 18621262 - 18621545
Alignment:
Q  44 ggtatcacacaaggtttgttggcctatatgaggatgaatctaggttcactaactttgccatttatcaactgatttttgtccagtgtgacaaagtgaacaa 143  Q
    ||||||||||||| ||| ||| ||| |||||||||||||| |||||||||| ||||||| |||||||| |  |||||||||||  |||||||||||| ||    
T  18621262 ggtatcacacaagctttattgtcctctatgaggatgaatccaggttcactacctttgccctttatcaattattttttgtccagaatgacaaagtgaaaaa 18621361  T
Q  144 atccgagaccatgtgtagtcgaaatgtgcgtgatgaggcagaagaaatgatccgtaattggataggaaaaaagactttggattctcacatctcctttatc 243  Q
     |||||||||| |||||||||||||| |||||||| ||  | | ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  18621362 ttccgagaccaagtgtagtcgaaatgagcgtgatgtggttggaaaaatgatccgtaactggataggaaaaaagactttggattctcacatctcctttgtc 18621461  T
Q  244 agcattagaagatggaagttgttgatgaatgagttgctagcttatggaatttggtttaagttatcatatttgtattcaaagttt 327  Q
    |    |||||| |||||| |||||||| ||| |||| |||  |||| ||||||| |||| |  ||||| |||| | ||||||||    
T  18621462 aaacatagaagttggaagatgttgatggatgggttgttagagtatgaaatttggcttaaatcctcatacttgtctgcaaagttt 18621545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 37970285 - 37970386
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  37970285 gggagcttctatggtgcagtcaggaaagtgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgatttctgattaatg 37970384  T
Q  728 at 729  Q
    ||    
T  37970385 at 37970386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 43643361 - 43643462
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  43643361 gggagcttctatggtgcagtcagaaaactgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgtcgattactgattaatg 43643460  T
Q  728 at 729  Q
    ||    
T  43643461 at 43643462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 5299712 - 5299813
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||    
T  5299712 gggagcttctatggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttaattcatttttaaattgttgattactgattaatg 5299811  T
Q  728 at 729  Q
    ||    
T  5299812 at 5299813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 16446641 - 16446742
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||    
T  16446641 gggagcttctacggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatgttagattcatttttaaattgttgattactgattaatg 16446740  T
Q  728 at 729  Q
    ||    
T  16446741 at 16446742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 35859358 - 35859257
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  35859358 gggagtttctacggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 35859259  T
Q  728 at 729  Q
    ||    
T  35859258 at 35859257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 629 - 729
Target Start/End: Complemental strand, 41362845 - 41362745
Alignment:
Q  629 ggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatga 728  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||    
T  41362845 ggagcttctatggtgcagtcaggaaactgacttttttgaaaaaattaattttgatcttaatgtttaattcatttttaaattgttgattactggttaatga 41362746  T
Q  729 t 729  Q
    |    
T  41362745 t 41362745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 627 - 729
Target Start/End: Original strand, 7890722 - 7890824
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    |||||||||||| ||||  |||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  7890722 tgggagcttctacggtgcggtcatgaaactgacttttttgaaaaagttaattttgatcttaatatttgattcatttttaaattgttgattactgattaat 7890821  T
Q  727 gat 729  Q
    |||    
T  7890822 gat 7890824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 630 - 729
Target Start/End: Original strand, 23854200 - 23854298
Alignment:
Q  630 gagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||| |||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  23854200 gagcttttatggtgtagtcaggaaattga-ttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgatttctgattaatgat 23854298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 1149398 - 1149499
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| |||||||||| |||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||| ||||||||    
T  1149398 gggagcttctacggtgcagtcaggaaattgacttttttgaaaaaattaattttgattttaatgtttgattcatttttaaattgttgattaccgattaatg 1149497  T
Q  728 at 729  Q
    ||    
T  1149498 at 1149499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 34895386 - 34895285
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| ||| |||||| |||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  34895386 gggagcttctacggtgcagttaggaaattgacttttttaaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 34895287  T
Q  728 at 729  Q
    ||    
T  34895286 at 34895285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 629 - 729
Target Start/End: Original strand, 31933653 - 31933753
Alignment:
Q  629 ggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatga 728  Q
    ||||||||||||||| |||  |||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||    
T  31933653 ggagcttctatggtgcagttgggaaactgacttttttgaaaaaattaattttgatcttaatatttgattcatttttaaatcgttgattactgattaatga 31933752  T
Q  729 t 729  Q
    |    
T  31933753 t 31933753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 631 - 729
Target Start/End: Complemental strand, 466253 - 466155
Alignment:
Q  631 agcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||| |||| ||||| |||||||| ||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  466253 agcttctacggtgcagtcatgaaactgatttttttgaataagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgat 466155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 627 - 729
Target Start/End: Original strand, 8803581 - 8803683
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    |||||| || || |||| |||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||    
T  8803581 tgggagtttttacggtgcagtcaggaaattgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttcattactgattaat 8803680  T
Q  727 gat 729  Q
    |||    
T  8803681 gat 8803683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 631 - 729
Target Start/End: Original strand, 34951826 - 34951924
Alignment:
Q  631 agcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||| |||| | ||| ||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  34951826 agcttctacggtgcaatcatgaaactgacttttctgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgat 34951924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 627 - 729
Target Start/End: Complemental strand, 38644403 - 38644301
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    ||||||||| || |||| ||||| |||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||| ||||||||||||||||    
T  38644403 tgggagcttttacggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgatttatttttaaatttttgattactgattaat 38644304  T
Q  727 gat 729  Q
    |||    
T  38644303 gat 38644301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 4132452 - 4132553
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||||||||||||  |||||||    
T  4132452 gggagcttctatggtgcagtcagcaaactgacttttttggaaaagttaattttgatcttaatgtgtaattcatttttaaattgttgattacaaattaatg 4132551  T
Q  728 at 729  Q
    ||    
T  4132552 at 4132553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 652 - 729
Target Start/End: Original strand, 35459501 - 35459578
Alignment:
Q  652 aaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  35459501 aaactgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgatttctgattaatgat 35459578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 634 - 729
Target Start/End: Original strand, 1953760 - 1953855
Alignment:
Q  634 ttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||| |||| |||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||    
T  1953760 ttctacggtgcagtcaggaaactgatttttttgaaaaaattaattttgatcttaatgtttgattcattttaaaattgttgattattgattaatgat 1953855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 627 - 729
Target Start/End: Complemental strand, 1205352 - 1205250
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    |||||||||||| ||||||||||| ||| |||||||||| |||||||||||||||||||   |||||||||||||||||||||| |||||| ||||||||    
T  1205352 tgggagcttctacggtgtagtcagaaaattgacttttttaaaaaagttaattttgatcttgttgtttgattcatttttaaattgctgattagtgattaat 1205253  T
Q  727 gat 729  Q
    |||    
T  1205252 gat 1205250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 653 - 729
Target Start/End: Complemental strand, 12587981 - 12587905
Alignment:
Q  653 aactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  12587981 aactgacttttttgaaaaaattaattttgatcttaatgtttgattcatttttaaattgttaattactgattaatgat 12587905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 624 - 729
Target Start/End: Complemental strand, 16223294 - 16223186
Alignment:
Q  624 ttatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaag---ttaattttgatctgaatgtttgattcatttttaaattgttgattactg 720  Q
    |||||||||||||||||||  |||||| |||||||||||||  |||||    ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  16223294 ttatgggagcttctatggtccagtcagaaaactgactttttgaaaaaaaaaattaattttgattttaatgtttgattcatttttaaattgttgattactg 16223195  T
Q  721 attaatgat 729  Q
    |||||||||    
T  16223194 attaatgat 16223186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 651 - 729
Target Start/End: Complemental strand, 44869898 - 44869820
Alignment:
Q  651 gaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||| |||||||||||||||    
T  44869898 gaaactgacttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgttggttactgattaatgat 44869820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 30654349 - 30654449
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||| ||||| |||| |||||||||||||| |||||||||||||||||||||||| | ||| ||||||||| |||||||||||| ||||||||||||||    
T  30654349 gggagtttctacggtgcagtcaggaaactgatttttttgaaaaagttaattttgattttaatatttgattca-ttttaaattgttaattactgattaatg 30654447  T
Q  728 at 729  Q
    ||    
T  30654448 at 30654449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 33198226 - 33198125
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| | ||| |||| |||||||||||||||||||||| || |||| |||| |||||||||||||||||||||||||| |||||||||    
T  33198226 gggagcttctacggtgcaatcatgaaattgacttttttgaaaaagttaatcttaatcttaatgattgattcatttttaaattgttgattattgattaatg 33198127  T
Q  728 at 729  Q
    ||    
T  33198126 at 33198125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 626 - 719
Target Start/End: Original strand, 10554968 - 10555062
Alignment:
Q  626 atgggagcttctatggtgtagtcaggaaactgacttttttgaaaaag-ttaattttgatctgaatgtttgattcatttttaaattgttgattact 719  Q
    ||||||||||||||||||  ||||| ||| ||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| ||||||    
T  10554968 atgggagcttctatggtgcggtcagaaaattgacttttttgaaaaaaattaattttgatcttaatgtttgattcatttttaaattgtttattact 10555062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 11727449 - 11727347
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgac-ttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    ||||||||||| |||| ||||| |||| |||| |||||| |||||||||||||| |||| |||  |||||||||||||||||||||||||||||||||||    
T  11727449 gggagcttctacggtgcagtcatgaaattgacattttttaaaaaagttaattttaatcttaataattgattcatttttaaattgttgattactgattaat 11727350  T
Q  727 gat 729  Q
    |||    
T  11727349 gat 11727347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 660 - 729
Target Start/End: Original strand, 27082636 - 27082705
Alignment:
Q  660 ttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||    
T  27082636 ttttttgaaaaagttaattttgatcttaatgtttaattcatttttaaattgttgattattgattaatgat 27082705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 633 - 729
Target Start/End: Complemental strand, 18259498 - 18259402
Alignment:
Q  633 cttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||||||| ||||| |||| ||||||||||||||| ||||||||| || | |||| |||||||||||||||||||||||||||| |||| ||||    
T  18259498 cttctatggtgcagtcatgaaattgacttttttgaaaaggttaattttaattttaatgattgattcatttttaaattgttgattactcattactgat 18259402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 33906634 - 33906535
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||||||  ||| |||||| |||||||||||||||||||||||||||||||||| | | || |||||||||||||||  |||||| ||||||||||    
T  33906634 gggagcttctacagtgcagtcagaaaactgacttttttgaaaaagttaattttgatcttactattcgattcatttttaaat--ttgattgctgattaatg 33906537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 662 - 728
Target Start/End: Original strand, 24823194 - 24823260
Alignment:
Q  662 ttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatga 728  Q
    |||| |||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||    
T  24823194 ttttaaaaaagttaattttaatcttaatgtttgatttatttttaaattgttgattactgattaatga 24823260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 648 - 728
Target Start/End: Complemental strand, 40862824 - 40862743
Alignment:
Q  648 caggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcat-ttttaaattgttgattactgattaatga 728  Q
    ||||||| |||||||||||||||||||| |||| |||| |||||||||||||| ||||||||||| ||||||||||| ||||    
T  40862824 caggaaattgacttttttgaaaaagttacttttaatcttaatgtttgattcattttttaaattgtcgattactgatttatga 40862743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 624 - 729
Target Start/End: Original strand, 6098275 - 6098380
Alignment:
Q  624 ttatgggagcttctatggtgtagtcaggaaactgactttttt-gaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgat 722  Q
    |||| ||||||||||||||| | | || ||||||| |||||| |  |||||||||  |||||| ||||||||||||||||||||||||||||||||| ||    
T  6098275 ttataggagcttctatggtgcatt-agaaaactgattttttttgggaaagttaatcatgatcttaatgtttgattcatttttaaattgttgattactaat 6098373  T
Q  723 taatgat 729  Q
    |||||||    
T  6098374 taatgat 6098380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 627 - 729
Target Start/End: Complemental strand, 12876535 - 12876433
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    ||||||||| || ||| || ||||||||||||||||||| ||||||||| |||| || | ||||||||||| ||||| ||| ||||||||||| ||| ||    
T  12876535 tgggagcttatacggtataatcaggaaactgacttttttaaaaaagttacttttaattttaatgtttgatttattttcaaactgttgattacttattcat 12876436  T
Q  727 gat 729  Q
    |||    
T  12876435 gat 12876433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 36694732 - 36694833
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| | || ||| | |||||||| |||||||||||||||| |||| || | ||||||||||| ||||||||||| ||||||||| ||| |||    
T  36694732 gggagcttctacgatgcagtgaagaaactgatttttttgaaaaagttacttttaattttaatgtttgatttatttttaaattattgattacttattcatg 36694831  T
Q  728 at 729  Q
    ||    
T  36694832 at 36694833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 649 - 729
Target Start/End: Complemental strand, 43026078 - 43025997
Alignment:
Q  649 aggaaactgacttttttgaaaaa-gttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||| ||| |||||||||||| ||||||||| || | ||||||||||||||||||||||||||||| ||||||| |||||    
T  43026078 aggaaattgatttttttgaaaaaagttaattttaattttaatgtttgattcatttttaaattgttgatcactgattcatgat 43025997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 628 - 700
Target Start/End: Complemental strand, 13308003 - 13307931
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcat 700  Q
    |||||||||||||||| | ||| |||| ||||| ||||||||||||||||||| |||| ||||||||||||||    
T  13308003 gggagcttctatggtgcaatcatgaaattgactattttgaaaaagttaattttaatcttaatgtttgattcat 13307931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 628 - 699
Target Start/End: Original strand, 41910824 - 41910895
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattca 699  Q
    |||||||||||||||| |||||  ||  |||||||||| |||||||||||||| ||||||||||||||||||    
T  41910824 gggagcttctatggtgcagtcattaatttgacttttttaaaaaagttaattttaatctgaatgtttgattca 41910895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 629 - 690
Target Start/End: Complemental strand, 9864594 - 9864533
Alignment:
Q  629 ggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatg 690  Q
    |||||||||| |||| ||| |||||||||||||||||||||||||||||||| |||| ||||    
T  9864594 ggagcttctaaggtgcagttaggaaactgacttttttgaaaaagttaattttaatcttaatg 9864533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 634 - 729
Target Start/End: Original strand, 39098891 - 39098986
Alignment:
Q  634 ttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||| |||| | ||| |||||||| |||||| ||||| |||||||| || | |||||||||| |||||||||||| ||||||| | |||||||||    
T  39098891 ttctacggtgcaatcatgaaactgatttttttaaaaaaattaattttaattttaatgtttgatgcatttttaaattattgattattaattaatgat 39098986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 633 - 673
Target Start/End: Original strand, 1872582 - 1872622
Alignment:
Q  633 cttctatggtgtagtcaggaaactgacttttttgaaaaagt 673  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  1872582 cttctatggtgtagtcaagaaaatgacttttttgaaaaagt 1872622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 698 - 729
Target Start/End: Original strand, 1149756 - 1149787
Alignment:
Q  698 catttttaaattgttgattactgattaatgat 729  Q
    ||||||||||||||||||||||||||||||||    
T  1149756 catttttaaattgttgattactgattaatgat 1149787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 628 - 675
Target Start/End: Original strand, 30650899 - 30650946
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagtta 675  Q
    ||||||||||| |||| ||||| |||| ||||||||||||||||||||    
T  30650899 gggagcttctacggtgcagtcaagaaattgacttttttgaaaaagtta 30650946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 691 - 729
Target Start/End: Complemental strand, 9864509 - 9864471
Alignment:
Q  691 tttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  9864509 tttgattcatttttaaattgttgattaccgattcatgat 9864471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 2e-42; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 97 - 413
Target Start/End: Original strand, 11777451 - 11777764
Alignment:
Q  97 tttgccatttatcaactgatttttgtccagtgtgacaaagtgaacaaatccgagaccatgtgtagtcgaaatgtgcgtgatgaggcagaagaaatgatcc 196  Q
    |||||| |||||||||  |||||| ||  || ||| |||||||||||||| ||||||| || |||||||||   ||||||||| ||  || |||||||      
T  11777451 tttgccttttatcaaccaatttttatcttgtatgataaagtgaacaaatctgagaccaagtttagtcgaaacacgcgtgatgaagccaaaaaaatgattt 11777550  T
Q  197 gtaattggataggaaaaaagactttggattctcacatctcctttatcagcattagaagatggaagttgttgatgaatgagttgctagcttatggaatttg 296  Q
    |||| | ||||| ||||||||||||||||||||||| ||||||| |||||||||||||||| ||  |||||||||||| |||| ||| |||| |||||||    
T  11777551 gtaactagatag-aaaaaagactttggattctcacacctcctttgtcagcattagaagatgaaaactgttgatgaatgggttgttaggttat-gaatttg 11777648  T
Q  297 gtttaagttatcatatttgtattcaaagtttaggtgtactgcaaatcctgttttaataggttttttctattgtattggctcttcaaaattgttggggaat 396  Q
    |||||| || ||| |||||| | | | ||| | ||||  |||||||| || | ||||||||||||||| |||  |||| |||||||||||||| ||||||    
T  11777649 gtttaatttctcacatttgtttgcgaggttaatgtgtcttgcaaatcatgctctaataggttttttctcttgcgttggatcttcaaaattgtt-gggaat 11777747  T
Q  397 accctttcaaagttaac 413  Q
     ||| ||||| ||||||    
T  11777748 gccccttcaatgttaac 11777764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 10923148 - 10923047
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10923148 gggagcttctatggtgcagtcagaaaactgactcttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactgattaatg 10923049  T
Q  728 at 729  Q
    ||    
T  10923048 at 10923047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 624 - 729
Target Start/End: Original strand, 34012133 - 34012238
Alignment:
Q  624 ttatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgatt 723  Q
    ||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  34012133 ttatgggagcttctacggtgcagtcaggaaactgacttttttaaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgatt 34012232  T
Q  724 aatgat 729  Q
    ||||||    
T  34012233 aatgat 34012238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 626 - 729
Target Start/End: Complemental strand, 46931833 - 46931730
Alignment:
Q  626 atgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaa 725  Q
    ||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  46931833 atgggagcttctacggtgcagtaaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaa 46931734  T
Q  726 tgat 729  Q
    ||||    
T  46931733 tgat 46931730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 32216476 - 32216375
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| |||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  32216476 gggagcttctacggtgcagtcagaaaactgacttttttaaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactgattaatg 32216377  T
Q  728 at 729  Q
    ||    
T  32216376 at 32216375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 627 - 729
Target Start/End: Complemental strand, 2960170 - 2960068
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    ||||| |||||| |||| |||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  2960170 tgggatcttctacggtgcagtcaggaaactgatttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaat 2960071  T
Q  727 gat 729  Q
    |||    
T  2960070 gat 2960068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 624 - 729
Target Start/End: Original strand, 19899519 - 19899624
Alignment:
Q  624 ttatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgatt 723  Q
    |||||||||||||||  ||| ||| |||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  19899519 ttatgggagcttctacagtgcagttaggaaactgacttttttggaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgatt 19899618  T
Q  724 aatgat 729  Q
    ||||||    
T  19899619 aatgat 19899624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 23999769 - 23999668
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||||||||||| |||||||||| |||| ||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  23999769 gggagcttctatggtgcagtcaggaaattgacctttttaaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 23999670  T
Q  728 at 729  Q
    ||    
T  23999669 at 23999668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 48353963 - 48353862
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| ||||| |||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  48353963 gggagcttctacggtgcagtcatgaaactgatttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatg 48353864  T
Q  728 at 729  Q
    ||    
T  48353863 at 48353862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 628 - 727
Target Start/End: Complemental strand, 32267455 - 32267356
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| |||||||||| |||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  32267455 gggagcttctacggtgcagtcaggaaattgacttttttgaaaaaattaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 32267356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 11742123 - 11742224
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||| |||||||| | ||||| |||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  11742123 gggagtttctatggcgcagtcatgaaactgatttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatg 11742222  T
Q  728 at 729  Q
    ||    
T  11742223 at 11742224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 14758453 - 14758352
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||  |||||||||    
T  14758453 gggagcttctacggtgcagtcacgaaactgacttttttgaaaaagttaattttgatcttaatgttcgattcatttttaaattgttgattgttgattaatg 14758354  T
Q  728 at 729  Q
    ||    
T  14758353 at 14758352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 624 - 729
Target Start/End: Original strand, 27563656 - 27563761
Alignment:
Q  624 ttatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgatt 723  Q
    ||||| ||| |||||||||| |||||||||||||| ||||||| ||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||    
T  27563656 ttatgagagtttctatggtgcagtcaggaaactgatttttttggaaaagttaattatgatcttaatgtttgattcttttttaaattgttgattactgatt 27563755  T
Q  724 aatgat 729  Q
    ||||||    
T  27563756 aatgat 27563761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 627 - 727
Target Start/End: Original strand, 10181761 - 10181861
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    ||||||||||||||||| |||||||||||| ||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||  ||||||||    
T  10181761 tgggagcttctatggtgcagtcaggaaactaacttttttggaaaagttaattatgatcttaatgtttgattcatttttaaattgttgattgttgattaat 10181860  T
Q  727 g 727  Q
    |    
T  10181861 g 10181861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 630 - 729
Target Start/End: Complemental strand, 15168515 - 15168416
Alignment:
Q  630 gagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||||| |||| ||| |||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||    
T  15168515 gagcttctacggtgcagttaggaaactgatttttttgaaaaagttaattttgatcttaatgttcgattcatttttaaattgttgattgctgattaatgat 15168416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 626 - 729
Target Start/End: Original strand, 27532735 - 27532837
Alignment:
Q  626 atgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaa 725  Q
    ||||||||||||| |||| ||||| |||||||| ||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||    
T  27532735 atgggagcttctacggtgcagtcatgaaactgatttttttgaaaaagttaattttaatcttaatgtttgattcattttt-aattgttgattactgattaa 27532833  T
Q  726 tgat 729  Q
    ||||    
T  27532834 tgat 27532837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 626 - 729
Target Start/End: Original strand, 47682247 - 47682350
Alignment:
Q  626 atgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaa 725  Q
    |||||||||||||||||| |||||| ||||||||||||||||| ||||||||||| |||| ||||||| |||| ||||||||||||| ||||||||||||    
T  47682247 atgggagcttctatggtgcagtcagtaaactgacttttttgaacaagttaattttaatcttaatgtttaattcttttttaaattgttaattactgattaa 47682346  T
Q  726 tgat 729  Q
    ||||    
T  47682347 tgat 47682350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 8222549 - 8222447
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttga-ttcatttttaaattgttgattactgattaat 726  Q
    ||||||||||| |||  |||||| |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  8222549 gggagcttctacggtacagtcagaaaactgacttttttgaaaaagttaattttgattttaatgtttgatttcatttttaaattgttgattactgattaat 8222450  T
Q  727 gat 729  Q
    |||    
T  8222449 gat 8222447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 629 - 726
Target Start/End: Complemental strand, 30254843 - 30254746
Alignment:
Q  629 ggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    |||| ||||| |||| ||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||    
T  30254843 ggagtttctacggtgcagtcaggaaactgacttttttaaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattattgattaat 30254746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 645 - 729
Target Start/End: Original strand, 27763082 - 27763166
Alignment:
Q  645 agtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||||| |||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  27763082 agtcaggaaattgacatttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgat 27763166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 651 - 729
Target Start/End: Complemental strand, 1547669 - 1547591
Alignment:
Q  651 gaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  1547669 gaaactgacttttttgaaaaaattaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgat 1547591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 631 - 729
Target Start/End: Original strand, 9902812 - 9902910
Alignment:
Q  631 agcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||| |||| ||||| |||  |||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||    
T  9902812 agcttctacggtgcagtcaagaatttgacttttttgaaaaagttaattttgattttaatatttgattcatttttaaattgttgattactgattaatgat 9902910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 3535344 - 3535243
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||||||||| |||||||| |||||| ||||||||| |||| |||| ||||||||||||||||||||||||||||||  |||||||||    
T  3535344 gggagcttctacggtgtagtcatgaaactgattttttttaaaaagttagttttaatcttaatgtttgattcatttttaaattgttgattgttgattaatg 3535245  T
Q  728 at 729  Q
    ||    
T  3535244 at 3535243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 624 - 729
Target Start/End: Complemental strand, 15752454 - 15752349
Alignment:
Q  624 ttatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgatt 723  Q
    ||||||||||||||| |||| |||||| ||| ||| |||||  ||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  15752454 ttatgggagcttctacggtgcagtcagaaaattgattttttaaaaaaaattaattttgatcttaatgtttaattcatttttaaattgttgattactgatt 15752355  T
Q  724 aatgat 729  Q
    ||||||    
T  15752354 aatgat 15752349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 37451706 - 37451605
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||| ||||| |||| ||| | |||| ||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||    
T  37451706 gggagattctacggtgcagtgaagaaattgacttttttgaaaaagttaatttttattttaatgtttgattcatttttaaattgttgattactgattaatg 37451607  T
Q  728 at 729  Q
    ||    
T  37451606 at 37451605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 649 - 729
Target Start/End: Original strand, 28564559 - 28564639
Alignment:
Q  649 aggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||    
T  28564559 aggaaattgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattattgattaatgat 28564639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 626 - 729
Target Start/End: Complemental strand, 22171134 - 22171031
Alignment:
Q  626 atgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaa 725  Q
    ||||||||||||| |||| | | || ||||||| |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||| |||||    
T  22171134 atgggagcttctacggtgcaattagaaaactgatttttttgaaaaagttaattttgattttaatgtttgatttatttttaaattgttgattactaattaa 22171035  T
Q  726 tgat 729  Q
    ||||    
T  22171034 tgat 22171031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 634 - 729
Target Start/End: Complemental strand, 38823629 - 38823534
Alignment:
Q  634 ttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||| |||| ||||| ||||||||||||||| |||||||||||||| |||| ||| |||| ||||||||||||||||||||||||||||||||||    
T  38823629 ttctacggtgcagtcatgaaactgacttttttaaaaaagttaattttaatcttaatatttgtttcatttttaaattgttgattactgattaatgat 38823534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 619 - 729
Target Start/End: Complemental strand, 47279620 - 47279509
Alignment:
Q  619 tttagttatgggagcttctatggtgtagtcaggaaactgactttttt-gaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgatta 717  Q
    |||| ||| ||||||||||| |||| |||||  ||||||| |||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  47279620 tttaattaagggagcttctacggtgcagtcataaaactgattttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgatta 47279521  T
Q  718 ctgattaatgat 729  Q
    || |||||||||    
T  47279520 ctaattaatgat 47279509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 631 - 729
Target Start/End: Complemental strand, 4330699 - 4330601
Alignment:
Q  631 agcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||| |||| ||||||  |||||| ||||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  4330699 agcttctacggtgcagtcagacaactgatttttttggaaaaattaattttgatcttaatgtttgattcatttttatattgttgattactgattaatgat 4330601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 627 - 729
Target Start/End: Complemental strand, 21290022 - 21289920
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    |||| |||| ||||||| ||| |  ||||||||||||||  |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21290022 tgggggcttatatggtgcagttaaaaaactgacttttttagaaaaattaattttgatcttaatgtttgattcatttttaaattgttgattactgattaat 21289923  T
Q  727 gat 729  Q
    |||    
T  21289922 gat 21289920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 31963038 - 31962936
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcattttt-aaattgttgattactgattaat 726  Q
    ||||||||||| |||| ||| | |||||||||||||||||||||||||||||| |||| ||||||||||| |||||| |||||||||||||| |||||||    
T  31963038 gggagcttctacggtgcagttatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgatttatttttaaaattgttgattaccgattaat 31962939  T
Q  727 gat 729  Q
    |||    
T  31962938 gat 31962936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 628 - 722
Target Start/End: Complemental strand, 48621010 - 48620916
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgat 722  Q
    ||||||||||| |||| ||||| ||||||||||||| |||||||||||||||| |||| ||||||||||||||||| ||||||||||||| ||||    
T  48621010 gggagcttctacggtgcagtcatgaaactgacttttctgaaaaagttaattttaatcttaatgtttgattcattttaaaattgttgattaatgat 48620916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 645 - 729
Target Start/End: Original strand, 7078835 - 7078919
Alignment:
Q  645 agtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||| |||||||| ||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||| |||||||||||    
T  7078835 agtcatgaaactgatttttttgaaaaagttaattttaatcttaatgattgattcatttttaaattgttgattattgattaatgat 7078919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 628 - 726
Target Start/End: Complemental strand, 15383355 - 15383256
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttga-ttcatttttaaattgttgattactgattaat 726  Q
    ||||||||||| |||  |||||||||| ||| |||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||| |||||||||    
T  15383355 gggagcttctacggttcagtcaggaaattgatttttttgaaaaagttaattttgattttaatgtttgatttcatttttaaattgttgattgctgattaat 15383256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 631 - 726
Target Start/End: Original strand, 27266959 - 27267053
Alignment:
Q  631 agcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    ||||||||||||| | |||||||||||||||||| ||||| |||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||    
T  27266959 agcttctatggtgcattcaggaaactgactttttggaaaa-gttaattttgatcttaatgtttaattcatttttaaattattgattattgattaat 27267053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 627 - 729
Target Start/End: Complemental strand, 16416068 - 16415966
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    |||||||||||| || | |||||   |||| ||||||||  |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16416068 tgggagcttctacggcgcagtcaaataactaacttttttagaaaaattaattttgatcttaatgtttgattcatttttaaattgttgattactgattaat 16415969  T
Q  727 gat 729  Q
    |||    
T  16415968 gat 16415966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 645 - 729
Target Start/End: Complemental strand, 39393788 - 39393704
Alignment:
Q  645 agtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||| |||| |||||||||| |||||||||||||| || | ||||||| |||||||||||||||||||||||||||||||||||    
T  39393788 agtcatgaaattgacttttttaaaaaagttaattttaattttaatgttttattcatttttaaattgttgattactgattaatgat 39393704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 651 - 729
Target Start/End: Original strand, 31621326 - 31621405
Alignment:
Q  651 gaaactgacttttttgaaaaagttaattttgatctgaatgtttgattca-tttttaaattgttgattactgattaatgat 729  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||  |||||||||||    
T  31621326 gaaactgacttttttgaaaaagttaattttgatcttaatgttcgattcattttttaaattgttgattgatgattaatgat 31621405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 33725366 - 33725468
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattca-tttttaaattgttgattactgattaat 726  Q
    |||||||| || | || |||||||||||||| ||||||||||||||| |||||||||| |||||| |||||| ||||| ||||||||||| |||||||||    
T  33725366 gggagcttatacgttgcagtcaggaaactgatttttttgaaaaagtttattttgatcttaatgttcgattcatttttttaattgttgattgctgattaat 33725465  T
Q  727 gat 729  Q
    |||    
T  33725466 gat 33725468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 649 - 729
Target Start/End: Complemental strand, 28770053 - 28769973
Alignment:
Q  649 aggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||| ||| ||||||||||||||||||||| || | ||||||||||||||||||||||||||||||| | |||||||||    
T  28770053 aggaaattgatttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgttgattattaattaatgat 28769973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 631 - 729
Target Start/End: Complemental strand, 51129275 - 51129179
Alignment:
Q  631 agcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||| | |||||| | |||| ||||||||||||||||||||||||  || | |||  ||||||||||||||||||||||||||||||||||||||    
T  51129275 agcttctacgatgtagttaagaaattgacttttttgaaaaagttaattt--attttaatacttgattcatttttaaattgttgattactgattaatgat 51129179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 212 - 274
Target Start/End: Original strand, 11778269 - 11778331
Alignment:
Q  212 aaaagactttggattctcacatctcctttatcagcattagaagatggaagttgttgatgaatg 274  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  11778269 aaaagactttggattctcacatctcctttatcagcattagaagatggaaaccgttgatgaatg 11778331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 660 - 729
Target Start/End: Original strand, 238300 - 238369
Alignment:
Q  660 ttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||||||||||| ||||| |||| ||||||||||||||||||||||||| ||||||||||| |||||    
T  238300 ttttttgaaaaagttgattttaatcttaatgtttgattcatttttaaattgtggattactgattcatgat 238369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 1359691 - 1359791
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||| |||||| |||| |||||| |||||||||| ||  |||||   ||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  1359691 gggatcttctacggtgcagtcagaaaactgacttgttaaaaaaaaaaaattt-gatcttaatgtttgattcatttttaaattgttgattactgattaatg 1359789  T
Q  728 at 729  Q
    ||    
T  1359790 at 1359791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 665 - 729
Target Start/End: Complemental strand, 3309538 - 3309473
Alignment:
Q  665 tgaaaaagttaattttga-tctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||    
T  3309538 tgaaaaagttaattttaaatctaaatgtttgattcatttttaaattgttgattactgattaatgat 3309473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 661 - 729
Target Start/End: Original strand, 27227273 - 27227341
Alignment:
Q  661 tttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||| |||||||||||||||| | ||||||| |||||||||||||| ||||||||||||||||||||    
T  27227273 tttttggaaaagttaattttgatattaatgtttaattcatttttaaatggttgattactgattaatgat 27227341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 628 - 693
Target Start/End: Complemental strand, 38759911 - 38759846
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgttt 693  Q
    |||||||||||||||| |||||   ||||||||||||||||||||||||||||||||| |||||||    
T  38759911 gggagcttctatggtgcagtcaattaactgacttttttgaaaaagttaattttgatcttaatgttt 38759846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 660 - 729
Target Start/End: Complemental strand, 42721425 - 42721356
Alignment:
Q  660 ttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||| |||||||||||| |||| | ||||||||||||||||||||||| ||||||||| |||||||||    
T  42721425 ttttttaaaaaagttaattatgattttaatgtttgattcatttttaaattattgattactcattaatgat 42721356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 667 - 729
Target Start/End: Complemental strand, 25161015 - 25160952
Alignment:
Q  667 aaaaagttaattttgatctgaatgtttgatt-catttttaaattgttgattactgattaatgat 729  Q
    |||| |||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||    
T  25161015 aaaaggttaattttgattttaatgtttgatttcatttttaaattgttgattactgattaatgat 25160952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 626 - 675
Target Start/End: Complemental strand, 26970907 - 26970858
Alignment:
Q  626 atgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagtta 675  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||||||||    
T  26970907 atgggtgcttttatggtgtagtcagtaaactgacttttttgaaaaagtta 26970858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 673 - 729
Target Start/End: Original strand, 30326751 - 30326808
Alignment:
Q  673 ttaattttgatctgaatgtttgatt-catttttaaattgttgattactgattaatgat 729  Q
    ||||||||||| | ||| ||||||| |||||||||||||||||||||||||| |||||    
T  30326751 ttaattttgattttaatatttgatttcatttttaaattgttgattactgattgatgat 30326808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 632 - 675
Target Start/End: Complemental strand, 7843165 - 7843122
Alignment:
Q  632 gcttctatggtgtagtcaggaaactgacttttttgaaaaagtta 675  Q
    |||||||||||||||||| |||| |||||||||| |||||||||    
T  7843165 gcttctatggtgtagtcaagaaaatgactttttttaaaaagtta 7843122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 687 - 722
Target Start/End: Complemental strand, 18423006 - 18422971
Alignment:
Q  687 aatgtttgattcatttttaaattgttgattactgat 722  Q
    ||||||||||||||||||||||||||||||| ||||    
T  18423006 aatgtttgattcatttttaaattgttgattaatgat 18422971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 632 - 675
Target Start/End: Complemental strand, 28013083 - 28013040
Alignment:
Q  632 gcttctatggtgtagtcaggaaactgacttttttgaaaaagtta 675  Q
    |||||||||||||||||| |||| || |||||||||||||||||    
T  28013083 gcttctatggtgtagtcaagaaaatgtcttttttgaaaaagtta 28013040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 632 - 675
Target Start/End: Complemental strand, 47555135 - 47555092
Alignment:
Q  632 gcttctatggtgtagtcaggaaactgacttttttgaaaaagtta 675  Q
    ||||||| |||| ||| |||||||||||||||||||||||||||    
T  47555135 gcttctacggtgcagttaggaaactgacttttttgaaaaagtta 47555092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 255 - 397
Target Start/End: Complemental strand, 19002591 - 19002449
Alignment:
Q  255 atggaagttgttgatgaatgagttgctagcttatggaatttggtttaagttatcatatttgtattcaaagtttaggtgtactgcaaatcctgttttaata 354  Q
    |||||||||||||||| ||  |||| |||  |||| |||||||||||| || |||||||||| | ||||||||  ||||| || ||||| || |||| |     
T  19002591 atggaagttgttgatggattggttgttagggtatgaaatttggtttaatttttcatatttgtctgcaaagtttctgtgtattgtaaatcatgatttagtt 19002492  T
Q  355 ggttttttctattgtattggctcttcaaaattgttggggaata 397  Q
    |  | || || || |||| ||||||||||||||  ||||||||    
T  19002491 gcctattactcttatattagctcttcaaaattgcaggggaata 19002449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 633 - 675
Target Start/End: Original strand, 42663232 - 42663274
Alignment:
Q  633 cttctatggtgtagtcaggaaactgacttttttgaaaaagtta 675  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||    
T  42663232 cttctatggtgcagtcacgaaattgacttttttgaaaaagtta 42663274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 632 - 673
Target Start/End: Complemental strand, 422363 - 422322
Alignment:
Q  632 gcttctatggtgtagtcaggaaactgacttttttgaaaaagt 673  Q
    ||||||||||||| |||| |||| ||||||||||||||||||    
T  422363 gcttctatggtgttgtcaagaaaatgacttttttgaaaaagt 422322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 633 - 674
Target Start/End: Complemental strand, 10598264 - 10598223
Alignment:
Q  633 cttctatggtgtagtcaggaaactgacttttttgaaaaagtt 674  Q
    |||||| |||| ||||| ||||||||||||||||||||||||    
T  10598264 cttctacggtgcagtcaagaaactgacttttttgaaaaagtt 10598223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 652 - 729
Target Start/End: Complemental strand, 41926553 - 41926476
Alignment:
Q  652 aaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||| ||||||  |||| |||||| |||| | ||||||||||||| ||||||||  ||||||| | |||||||||    
T  41926553 aaactgatttttttttaaaaattaattatgattttaatgtttgattcaattttaaatcattgattattaattaatgat 41926476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 1e-40; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 46 - 274
Target Start/End: Complemental strand, 4928742 - 4928513
Alignment:
Q  46 tatcacacaaggtttgttggcctatatgaggatgaatctaggttcactaactttgccatttatcaactgatttttgtccagtgtgacaaagtgaacaaat 145  Q
    ||||||||||| ||||||| | | |||||||||||||| |||||||    ||||||| ||||||  ||||||| |||| || ||  ||||||||| ||||    
T  4928742 tatcacacaagttttgttgccttttatgaggatgaatccaggttcaacccctttgccttttatcggctgatttctgtctagagtctcaaagtgaaaaaat 4928643  T
Q  146 ccgagaccatgtgtagtcgaaatgtgcgtgatgaggc-agaagaaatgatccgtaattggataggaaaaaagactttggattctcacatctcctttatca 244  Q
    | |||||||  | ||||||||||||||||||||| || | || ||||||| ||||| | ||||||||||||||||||||||||||||||||||||| |||    
T  4928642 ctgagaccaaatatagtcgaaatgtgcgtgatgaagccaaaaaaaatgattcgtaactagataggaaaaaagactttggattctcacatctcctttgtca 4928543  T
Q  245 gcattagaagatggaagttgttgatgaatg 274  Q
     | |||||  ||||||| ||||||||||||    
T  4928542 cctttagagaatggaagatgttgatgaatg 4928513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 629 - 729
Target Start/End: Complemental strand, 1946260 - 1946159
Alignment:
Q  629 ggagcttctatggtgtagtcaggaaactgacttttttgaaaaa-gttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  1946260 ggagcttctacggtgcagtcaggaaactgacttttttgaaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 1946161  T
Q  728 at 729  Q
    ||    
T  1946160 at 1946159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 6090941 - 6091042
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| |||||| ||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6090941 gggagcttctacggtgcagtcagaaaacttacttttttaaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactgattaatg 6091040  T
Q  728 at 729  Q
    ||    
T  6091041 at 6091042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 626 - 729
Target Start/End: Complemental strand, 20768509 - 20768406
Alignment:
Q  626 atgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaa 725  Q
    ||||||||||||| |||| |||||||||| ||| |||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||    
T  20768509 atgggagcttctacggtgcagtcaggaaattgatttttttgaaaaagttaattttgatcttaatgttcaattcatttttaaattgttgattactgattaa 20768410  T
Q  726 tgat 729  Q
    ||||    
T  20768409 tgat 20768406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 3879698 - 3879799
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||| |||||| |||| |||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||    
T  3879698 gggaccttctacggtgcagtcaggaaactgatttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 3879797  T
Q  728 at 729  Q
    ||    
T  3879798 at 3879799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 5627817 - 5627716
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| |||||||||||||| |||||| ||||| ||||||||||| | ||| |||||||||||||||||||||||||||||||||||||    
T  5627817 gggagcttctacggtgcagtcaggaaactgatttttttaaaaaaattaattttgattttaatatttgattcatttttaaattgttgattactgattaatg 5627718  T
Q  728 at 729  Q
    ||    
T  5627717 at 5627716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 630 - 729
Target Start/End: Original strand, 7054533 - 7054632
Alignment:
Q  630 gagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||| || |||| ||||| ||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||| |||||||||||    
T  7054533 gagcttttacggtgcagtcaagaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatctttaaattgttgattaatgattaatgat 7054632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 626 - 716
Target Start/End: Original strand, 7234789 - 7234879
Alignment:
Q  626 atgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgatt 716  Q
    |||||||||| || ||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||    
T  7234789 atgggagcttttacggtgtagtcaggaaaatgatttttttgaaaaagttaattttgatcttaatgttcgatttatttttaaattgttgatt 7234879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 651 - 729
Target Start/End: Original strand, 33892794 - 33892872
Alignment:
Q  651 gaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||| |||||||||||    
T  33892794 gaaactgacttttttgaaaaagttaattttaaccttaatgtttgattcatttttaaattgttgattattgattaatgat 33892872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 640 - 722
Target Start/End: Complemental strand, 8513634 - 8513552
Alignment:
Q  640 ggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgat 722  Q
    |||| ||||| |||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||| ||||    
T  8513634 ggtgcagtcatgaaactgacttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgttgattaatgat 8513552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 651 - 729
Target Start/End: Complemental strand, 29182563 - 29182485
Alignment:
Q  651 gaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||| |||||||||||||||||||||||  ||| |||| |||||||||||||||||||||||||  |||||||||||    
T  29182563 gaaactaacttttttgaaaaagttaattttagtcttaatgattgattcatttttaaattgttgattgttgattaatgat 29182485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 649 - 722
Target Start/End: Complemental strand, 33619237 - 33619164
Alignment:
Q  649 aggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgat 722  Q
    |||||| |||||||||| |||||||||||||| |||| |||||| ||||||||||||||||||||||| |||||    
T  33619237 aggaaattgactttttttaaaaagttaattttaatcttaatgttcgattcatttttaaattgttgattgctgat 33619164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 4318575 - 4318682
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaat------gtttgattcatttttaaattgttgattactga 721  Q
    ||||||||||| |||| ||| | |||||||| ||||||||||||||||||||| || | |||      |||||||| ||||||||||||||||||| |||    
T  4318575 gggagcttctacggtgcagttatgaaactgatttttttgaaaaagttaattttaattttaattttaatgtttgatttatttttaaattgttgattaatga 4318674  T
Q  722 ttaatgat 729  Q
    ||||||||    
T  4318675 ttaatgat 4318682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 672 - 727
Target Start/End: Original strand, 33724062 - 33724117
Alignment:
Q  672 gttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||    
T  33724062 gttaattttgatcttaatgtttgattcatttttaaattgttgcttaatgattaatg 33724117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 667 - 729
Target Start/End: Original strand, 21016916 - 21016978
Alignment:
Q  667 aaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||||||||| |||| ||| |||||||||||| |||||||||||||||||||| |||||    
T  21016916 aaaaagttaattttaatcttaatatttgattcatttataaattgttgattactgattcatgat 21016978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 663 - 722
Target Start/End: Complemental strand, 6089286 - 6089227
Alignment:
Q  663 tttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgat 722  Q
    ||||||||| |||||||| || | ||||||||||||||||||||||||||||||| ||||    
T  6089286 tttgaaaaaattaattttaattttaatgtttgattcatttttaaattgttgattaatgat 6089227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 240
Target Start/End: Complemental strand, 34222310 - 34222167
Alignment:
Q  97 tttgccatttatcaactgatttttgtccagtgtgacaaagtgaacaaatccgagaccatgtgtagtcgaaatgtgcgtgatgaggcagaagaaatgatcc 196  Q
    |||||| ||||||||||| || || ||||||| ||||  ||||||||   ||||||||  | ||||||||||| ||||||||| ||  || |||||||||    
T  34222310 tttgccttttatcaactgtttcttatccagtgcgacatggtgaacaagatcgagaccaattatagtcgaaatgcgcgtgatgaagccaaaaaaatgatcc 34222211  T
Q  197 gtaattggataggaaaaaagactttggattctcacatctccttt 240  Q
    |||  || |||| || ||||| | ||||||||||||| ||||||    
T  34222210 gtacctgaatagaaagaaagattgtggattctcacatttccttt 34222167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 240
Target Start/End: Original strand, 3340260 - 3340404
Alignment:
Q  97 tttgccatttatcaactgatttttgtccagtgtgacaaagtgaacaaatccgagaccatgtgtagtcgaaatgtgcgtgatgaggc-agaagaaatgatc 195  Q
    |||||| ||||||||||| || || ||  ||| ||||  ||||||||   ||||||||  | ||||||||||| ||||||||| || | || ||||||||    
T  3340260 tttgccttttatcaactgtttcttatctggtgcgacatggtgaacaagatcgagaccaattatagtcgaaatgcgcgtgatgaagctaaaaaaaatgatc 3340359  T
Q  196 cgtaattggataggaaaaaagactttggattctcacatctccttt 240  Q
    ||||| ||||||| || ||||| | ||||||||||||| ||||||    
T  3340360 cgtaactggatagaaagaaagattgtggattctcacatttccttt 3340404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 628 - 675
Target Start/End: Original strand, 6613657 - 6613704
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagtta 675  Q
    |||||||| || |||| |||||||||||||||||||||||||||||||    
T  6613657 gggagcttgtacggtgcagtcaggaaactgacttttttgaaaaagtta 6613704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 624 - 680
Target Start/End: Original strand, 21016722 - 21016778
Alignment:
Q  624 ttatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaatttt 680  Q
    ||||||||||||||| |||| |||||| ||| || ||||||||||||||||| ||||    
T  21016722 ttatgggagcttctacggtgcagtcagaaaattgtcttttttgaaaaagttattttt 21016778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 1e-40; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 25184538 - 25184437
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  25184538 gggagcttctatggtgcagtcagaaaactgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgtcgattactgattaatg 25184439  T
Q  728 at 729  Q
    ||    
T  25184438 at 25184437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 34361277 - 34361378
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  34361277 gggagcttctacggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 34361376  T
Q  728 at 729  Q
    ||    
T  34361377 at 34361378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 627 - 729
Target Start/End: Original strand, 879333 - 879435
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  879333 tgggagcttctatggtgtagtcagaaaactgactttttaaaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattacttattaat 879432  T
Q  727 gat 729  Q
    |||    
T  879433 gat 879435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 624 - 729
Target Start/End: Complemental strand, 7703938 - 7703833
Alignment:
Q  624 ttatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgatt 723  Q
    |||||| |||||||| |||| ||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  7703938 ttatggaagcttctacggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgatt 7703839  T
Q  724 aatgat 729  Q
    ||||||    
T  7703838 aatgat 7703833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 49376392 - 49376291
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  49376392 gggagcttctacggtgcagtcaggaaactgacttttttgaaaaagttaattttgatcttaatgtttaattcatttttaaattcttgattactgattaatg 49376293  T
Q  728 at 729  Q
    ||    
T  49376292 at 49376291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 625 - 729
Target Start/End: Original strand, 19440431 - 19440535
Alignment:
Q  625 tatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgatta 724  Q
    |||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||    
T  19440431 tatgggagcttctacggtgcagtcaggaaactgacttttttaaaaaagttaattttgatcttaatgtttgattaatttttaaattattgattactgatta 19440530  T
Q  725 atgat 729  Q
    |||||    
T  19440531 atgat 19440535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 627 - 729
Target Start/End: Complemental strand, 6864461 - 6864359
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    |||||||||||| |||| |||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||    
T  6864461 tgggagcttctacggtgcagtcagaaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattattgattaat 6864362  T
Q  727 gat 729  Q
    |||    
T  6864361 gat 6864359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 33816302 - 33816403
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| | || ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||    
T  33816302 gggagcttctacgatgcagtcaggaaactgacttttttgaaaaagttaattttgatcttaatgttcgattcatttttaaattgttgattgctgattaatg 33816401  T
Q  728 at 729  Q
    ||    
T  33816402 at 33816403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 35020817 - 35020918
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| ||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  35020817 gggagcttctacggtgtagtcagaaaactgactcttttaaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattaccgattaatg 35020916  T
Q  728 at 729  Q
    ||    
T  35020917 at 35020918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 36493475 - 36493576
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||| ||||||||    
T  36493475 gggagcttctatggtgcagtcaggaaattgacttttttgaaaaagttaattatgatcttaatgtttgattcatttttaaattgttaattacggattaatg 36493574  T
Q  728 at 729  Q
    ||    
T  36493575 at 36493576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 629 - 726
Target Start/End: Complemental strand, 3043043 - 3042946
Alignment:
Q  629 ggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    |||||||||| |||| ||||| |||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  3043043 ggagcttctacggtgcagtcaagaaattgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaat 3042946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 640 - 729
Target Start/End: Complemental strand, 23761484 - 23761395
Alignment:
Q  640 ggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||    
T  23761484 ggtgtagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattattgattactgattaatgat 23761395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 32912365 - 32912466
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||| || |||| ||||||||||||||||||||||||||| || |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  32912365 gggagcttttacggtgcagtcaggaaactgacttttttgaaaaaattcattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 32912464  T
Q  728 at 729  Q
    ||    
T  32912465 at 32912466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 624 - 729
Target Start/End: Original strand, 46887940 - 46888045
Alignment:
Q  624 ttatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgatt 723  Q
    ||||| ||||||||| |||| | ||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||| |||||    
T  46887940 ttatgcgagcttctacggtgcaatcaggaaactgacttttttgaaaaagttaattttgattttaatatttgattcatttttaaattgttgattagtgatt 46888039  T
Q  724 aatgat 729  Q
    ||||||    
T  46888040 aatgat 46888045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 47254165 - 47254064
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| |||||  ||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||    
T  47254165 gggagcttctacggtggagtcatcaaactgacttttttgaaaaagttaattttaatcttaatgattgattcatttttaaattgttgattactgattaatg 47254066  T
Q  728 at 729  Q
    ||    
T  47254065 at 47254064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 626 - 729
Target Start/End: Original strand, 19089237 - 19089340
Alignment:
Q  626 atgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaa 725  Q
    ||||||||||||| |||| |||||||||| |||||||||||| ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||    
T  19089237 atgggagcttctacggtgcagtcaggaaattgacttttttgataaagttaattttgattttaacgattgattcatttttaaattgttgattactgattaa 19089336  T
Q  726 tgat 729  Q
    ||||    
T  19089337 tgat 19089340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 624 - 729
Target Start/End: Original strand, 25700838 - 25700943
Alignment:
Q  624 ttatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgatt 723  Q
    ||||||||| ||||| |||| ||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||| |||||    
T  25700838 ttatgggagtttctacggtgcagttaggaaattgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgtacattattgatt 25700937  T
Q  724 aatgat 729  Q
    ||||||    
T  25700938 aatgat 25700943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 26896513 - 26896412
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||| |||||| |||| |||||||||| |||||||||| ||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||    
T  26896513 gggaacttctacggtgcagtcaggaaattgacttttttaaaaaagttaattttgattttaatgttcgattcatttttaaattgttgattactgattaatg 26896414  T
Q  728 at 729  Q
    ||    
T  26896413 at 26896412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 28002772 - 28002873
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||||||   || ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||  |||||||||    
T  28002772 gggagcttctacactgcagtcaggaaactgacttttttgaaaaagttaattttgatcttaatgttcgattcatttttaaattgttgattgttgattaatg 28002871  T
Q  728 at 729  Q
    ||    
T  28002872 at 28002873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 624 - 729
Target Start/End: Original strand, 30002423 - 30002528
Alignment:
Q  624 ttatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgatt 723  Q
    ||||||||||||||| |||| ||| | |||| |||||||| |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||    
T  30002423 ttatgggagcttctacggtgcagttatgaaattgacttttctgaaaaagttaattttaatcttaatgtttgattcatttttaaattgtttattactgatt 30002522  T
Q  724 aatgat 729  Q
    ||||||    
T  30002523 aatgat 30002528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 624 - 729
Target Start/End: Complemental strand, 37776087 - 37775982
Alignment:
Q  624 ttatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgatt 723  Q
    |||| |||||||||| |||| ||||| |||| |||||||||| |||||||||||||  |||| |||||||||||||||||||||||||||||||||||||    
T  37776087 ttattggagcttctacggtgcagtcatgaaattgacttttttaaaaaagttaatttcaatcttaatgtttgattcatttttaaattgttgattactgatt 37775988  T
Q  724 aatgat 729  Q
    ||||||    
T  37775987 aatgat 37775982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 625 - 729
Target Start/End: Complemental strand, 32579874 - 32579770
Alignment:
Q  625 tatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgatta 724  Q
    |||||||| ||||| |||| ||| || |||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||| |||||||    
T  32579874 tatgggagtttctacggtgcagttagaaaactgacttttttgaaaaaattaattttgatcttaatgtttgatttatttttaaattgttgattgctgatta 32579775  T
Q  725 atgat 729  Q
    |||||    
T  32579774 atgat 32579770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 645 - 729
Target Start/End: Complemental strand, 39400416 - 39400332
Alignment:
Q  645 agtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||    
T  39400416 agtcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattgctgattaatgat 39400332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 626 - 729
Target Start/End: Original strand, 55240889 - 55240992
Alignment:
Q  626 atgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaa 725  Q
    |||||| |||||| |||| ||| | ||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  55240889 atgggaacttctacggtgcagttatgaaactgacttttttgaaaaatttaattttaatcttaatgtttgattcatttttaaattgttgattattgattaa 55240988  T
Q  726 tgat 729  Q
    ||||    
T  55240989 tgat 55240992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 627 - 729
Target Start/End: Complemental strand, 4598408 - 4598306
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    |||||||||||| |||| ||||| ||||||||||||||  |||| ||||||||| |||| |||||||||||||||||||||||||||||| |||||||||    
T  4598408 tgggagcttctacggtgcagtcatgaaactgactttttgtaaaatgttaattttaatcttaatgtttgattcatttttaaattgttgattgctgattaat 4598309  T
Q  727 gat 729  Q
    |||    
T  4598308 gat 4598306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 23431980 - 23431879
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||||||  ||| ||||| |||||||||||||||||||||||||||||| || | |||||||||| |||||||||||||||||||||| |||||||    
T  23431980 gggagcttctacagtgcagtcatgaaactgacttttttgaaaaagttaattttaattttaatgtttgatgcatttttaaattgttgattactaattaatg 23431881  T
Q  728 at 729  Q
    ||    
T  23431880 at 23431879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 29583986 - 29584087
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| ||||| |||| |||||| |||||||||||||||||| |||| |||||||||||||||||||||| ||| ||||||||||||||    
T  29583986 gggagcttctacggtgcagtcatgaaattgacttgtttgaaaaagttaattttaatcttaatgtttgattcatttttaaatcgttcattactgattaatg 29584085  T
Q  728 at 729  Q
    ||    
T  29584086 at 29584087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 625 - 729
Target Start/End: Complemental strand, 50765148 - 50765044
Alignment:
Q  625 tatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgatta 724  Q
    |||| ||||||||| |||| | ||| |||||  |||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  50765148 tatgagagcttctacggtgcaatcatgaaacaaacttttttaaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgatta 50765049  T
Q  725 atgat 729  Q
    |||||    
T  50765048 atgat 50765044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 4205409 - 4205308
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| ||||| ||||||||||||||||||||||||| |||| || | ||||||||||||||||||||||| ||||||||| ||| |||    
T  4205409 gggagcttctacggtgcagtcaagaaactgacttttttgaaaaagttacttttaattttaatgtttgattcatttttaaattattgattacttattcatg 4205310  T
Q  728 at 729  Q
    ||    
T  4205309 at 4205308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 652 - 729
Target Start/End: Original strand, 7152014 - 7152091
Alignment:
Q  652 aaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||| |||||||||||    
T  7152014 aaactgacttttttgaaaaagttatttttcatcttaatgtttgattcatttttaaattgttgattattgattaatgat 7152091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 17272389 - 17272288
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| ||||| |||| |||||| |||||||||||||||||| |||| |||||||||||||||||||||| ||| ||||| ||||||||    
T  17272389 gggagcttctacggtgcagtcatgaaattgacttatttgaaaaagttaattttaatcttaatgtttgattcatttttaaatcgttcattaccgattaatg 17272290  T
Q  728 at 729  Q
    ||    
T  17272289 at 17272288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 37663527 - 37663628
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||  |||||||||| |||||||||| | ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||||    
T  37663527 gggagcttctacggtacagtcaggaaattgacttttttaataaagttaattttgattttaacgattgattcatttttaaattgttgattactgattaatg 37663626  T
Q  728 at 729  Q
    ||    
T  37663627 at 37663628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 38012687 - 38012586
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||| ||  ||| |||||||||||| | |||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| ||||||||||    
T  38012687 gggagcttttacagtgcagtcaggaaactaatttttttgaaaaagttaattttgatcttaatgttcgatttatttttaaattgttgattgctgattaatg 38012588  T
Q  728 at 729  Q
    ||    
T  38012587 at 38012586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 661 - 729
Target Start/End: Complemental strand, 1815693 - 1815625
Alignment:
Q  661 tttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  1815693 tttttaaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactgattaatgat 1815625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 645 - 729
Target Start/End: Complemental strand, 33341806 - 33341722
Alignment:
Q  645 agtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||| || |||||||||||| ||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  33341806 agtcatgatactgacttttttaaaaaaattaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgat 33341722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 628 - 727
Target Start/End: Complemental strand, 37288154 - 37288054
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttga-tctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    ||||||||| | |||| ||||| |||| ||||||||||||||||||||||||| | ||| ||||||||||||||||||||||| ||||||||||||||||    
T  37288154 gggagcttccacggtgcagtcatgaaagtgacttttttgaaaaagttaattttaaatcttaatgtttgattcatttttaaattattgattactgattaat 37288055  T
Q  727 g 727  Q
    |    
T  37288054 g 37288054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 634 - 725
Target Start/End: Complemental strand, 32592503 - 32592412
Alignment:
Q  634 ttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaa 725  Q
    ||||| |||| |||||  ||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  32592503 ttctacggtgcagtcataaaattgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattattgattaa 32592412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 651 - 729
Target Start/End: Complemental strand, 50697644 - 50697566
Alignment:
Q  651 gaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||||||||||||||||| |||||||| || | ||||||||||||||||||||||||||||||||| |||||||||    
T  50697644 gaaactgacttttttgaaaaaattaatttttattttaatgtttgattcatttttaaattgttgattactaattaatgat 50697566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 626 - 729
Target Start/End: Original strand, 4933996 - 4934100
Alignment:
Q  626 atgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcattttt-aaattgttgattactgatta 724  Q
    |||| ||||| |||| ||||||||  ||||||||||||||||| |||||||||||||||| ||||||| ||| |||||| ||||| ||||||||||||||    
T  4933996 atggaagcttatatgatgtagtcaataaactgacttttttgaacaagttaattttgatcttaatgtttaatttatttttaaaatttttgattactgatta 4934095  T
Q  725 atgat 729  Q
    |||||    
T  4934096 atgat 4934100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 629 - 729
Target Start/End: Complemental strand, 9139653 - 9139553
Alignment:
Q  629 ggagcttctatggtgt--agtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    ||||||||||||||||  ||| |||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||  | ||||| ||||||||    
T  9139653 ggagcttctatggtgtgcagtgaggaaactgacttttttggaaaagttaattatgatcttaatgtttgattcatttttaaat--tagattattgattaat 9139556  T
Q  727 gat 729  Q
    |||    
T  9139555 gat 9139553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 654 - 729
Target Start/End: Original strand, 35025379 - 35025453
Alignment:
Q  654 actgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||    
T  35025379 actgacttttatgaaaaagttaattttgattt-aatgtttgattcatttttaaattgttgattgctgattaatgat 35025453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 627 - 729
Target Start/End: Original strand, 5047751 - 5047853
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    ||||||||| || |||| ||||||||||| ||||||||||||||| ||||||||||| | |||||| ||||||||||||||||||| |||  |||||| |    
T  5047751 tgggagcttttacggtgcagtcaggaaacagacttttttgaaaaaattaattttgattttaatgttcgattcatttttaaattgtttattgttgattact 5047850  T
Q  727 gat 729  Q
    |||    
T  5047851 gat 5047853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 17168138 - 17168037
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||| ||||| |||| ||| | ||||||||||||||||||||| ||| |||| || | ||||||||||||||||||||||| ||||||||| |||||||    
T  17168138 gggagtttctacggtgcagtaaagaaactgacttttttgaaaaaattacttttaattttaatgtttgattcatttttaaattattgattactaattaatg 17168039  T
Q  728 at 729  Q
    ||    
T  17168038 at 17168037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 17173715 - 17173614
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||| ||||| |||| ||||| ||||||||||||||||||||| ||| |||| || | ||||||||||||||||||||||| ||||||||| ||| |||    
T  17173715 gggagtttctacggtgcagtcaagaaactgacttttttgaaaaaattacttttaattttaatgtttgattcatttttaaattattgattacttattcatg 17173616  T
Q  728 at 729  Q
    ||    
T  17173615 at 17173614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 628 - 728
Target Start/End: Complemental strand, 42200155 - 42200056
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| | |||||||| |||| ||||||||||||||||||| ||| |  |||||||||| ||||||||||| |||||||||||||||||    
T  42200155 gggagcttctacggtgcaatcaggaaattgacctttttgaaaaagttaattt-gattttgatgtttgattaatttttaaattattgattactgattaatg 42200057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 667 - 729
Target Start/End: Original strand, 55477716 - 55477778
Alignment:
Q  667 aaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  55477716 aaaaaattaattttgatcttaatgtttgattcatttttaaattgttaattactgattaatgat 55477778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 660 - 729
Target Start/End: Original strand, 46883932 - 46884001
Alignment:
Q  660 ttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||||||| |||||||| || | ||||||||||| |||||||||||||||||||||||||||||||    
T  46883932 ttttttgaaaaaattaatttttattttaatgtttgatttatttttaaattgttgattactgattaatgat 46884001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 630 - 718
Target Start/End: Complemental strand, 27397037 - 27396949
Alignment:
Q  630 gagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattac 718  Q
    |||||| || |||| | ||| |||||||| |||||  |||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  27397037 gagcttttacggtgcaatcatgaaactgattttttaaaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattac 27396949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 670 - 725
Target Start/End: Original strand, 34947923 - 34947978
Alignment:
Q  670 aagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaa 725  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  34947923 aagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaa 34947978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 632 - 673
Target Start/End: Complemental strand, 14246572 - 14246531
Alignment:
Q  632 gcttctatggtgtagtcaggaaactgacttttttgaaaaagt 673  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  14246572 gcttctatggtgtagtcaagaaaatgacttttttgaaaaagt 14246531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 632 - 675
Target Start/End: Original strand, 47073065 - 47073108
Alignment:
Q  632 gcttctatggtgtagtcaggaaactgacttttttgaaaaagtta 675  Q
    ||||||||||||||||||| ||| ||||| ||||||||||||||    
T  47073065 gcttctatggtgtagtcagtaaattgactattttgaaaaagtta 47073108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 230
Target Start/End: Original strand, 21781472 - 21781509
Alignment:
Q  193 atccgtaattggataggaaaaaagactttggattctca 230  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  21781472 atccgtaactggattggaaaaaagactttggattctca 21781509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 3e-38; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 18494059 - 18494160
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||| || |||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  18494059 gggagcttatacggtgtagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatg 18494158  T
Q  728 at 729  Q
    ||    
T  18494159 at 18494160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 31862277 - 31862176
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  31862277 gggagcttctatggtgcagtcgggaaactgacttttttgaaaaagttaattttgatcttaatatttgattcatttttaaatcgttgattactgattaatg 31862178  T
Q  728 at 729  Q
    ||    
T  31862177 at 31862176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 629 - 729
Target Start/End: Original strand, 43648024 - 43648124
Alignment:
Q  629 ggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatga 728  Q
    |||||||||| |||| |||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  43648024 ggagcttctacggtgcagtcaggaaattgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatga 43648123  T
Q  729 t 729  Q
    |    
T  43648124 t 43648124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 627 - 729
Target Start/End: Original strand, 19289100 - 19289202
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||| |||||||||    
T  19289100 tgggagcttctatggtgcagttaggaaactgacttttttgaaaaagttaattttgatcttaatgtttaattcatttttaaattgttaatttctgattaat 19289199  T
Q  727 gat 729  Q
    |||    
T  19289200 gat 19289202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 627 - 729
Target Start/End: Complemental strand, 41961266 - 41961164
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    |||||||||||| |||| |||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||    
T  41961266 tgggagcttctacggtgcagtcaggaaactgaattttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattattgattaat 41961167  T
Q  727 gat 729  Q
    |||    
T  41961166 gat 41961164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 626 - 729
Target Start/End: Original strand, 19424418 - 19424521
Alignment:
Q  626 atgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaa 725  Q
    ||||||||||||| |||| |||||  ||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||    
T  19424418 atgggagcttctacggtgcagtcatcaaactgacttttttgaaaaagttaattttaatcttaatgattgattcatttttaaattgttgattactgattaa 19424517  T
Q  726 tgat 729  Q
    ||||    
T  19424518 tgat 19424521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 33660155 - 33660256
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| ||||| ||||||||||||| |||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||    
T  33660155 gggagcttctacggtgcagtcatgaaactgacttttctgaaaaagttaattttaattttaatgtttgattcatttttaaattgttgattactgattaatg 33660254  T
Q  728 at 729  Q
    ||    
T  33660255 at 33660256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 625 - 729
Target Start/End: Complemental strand, 35959320 - 35959216
Alignment:
Q  625 tatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgatta 724  Q
    |||||||||||||| |||| | |||  ||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  35959320 tatgggagcttctacggtgcactcaaaaaattgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgatta 35959221  T
Q  725 atgat 729  Q
    |||||    
T  35959220 atgat 35959216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 628 - 727
Target Start/End: Original strand, 29241923 - 29242022
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||||||||||| ||||||||||||||  |||||| ||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  29241923 gggagcttctatggtgcagtcaggaaactgaactttttggaaaagttaattatgatcttaatgtttgattcatttttaaattgttgattgctgattaatg 29242022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 4167347 - 4167246
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| |||||| ||| ||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||| |||    
T  4167347 gggagcttctacggtgcagtcagaaaattgacttttttgaaaaagttaattttaatcttaatgtttaattcatttttaaattgttgattactgattcatg 4167248  T
Q  728 at 729  Q
    ||    
T  4167247 at 4167246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 630 - 729
Target Start/End: Complemental strand, 44914090 - 44913991
Alignment:
Q  630 gagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||||| |||| |||||| ||||||  ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||    
T  44914090 gagcttctacggtgcagtcagcaaactggtttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgat 44913991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 628 - 715
Target Start/End: Complemental strand, 45328114 - 45328028
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgat 715  Q
    ||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  45328114 gggagcttctacggtgcagtcag-aaactgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgat 45328028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 628 - 726
Target Start/End: Original strand, 2325156 - 2325254
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    ||||||||||| |||| |||||| ||| ||| |||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  2325156 gggagcttctacggtgcagtcagaaaattgattttttttaaaaagttaattttgatcttaatgtttgatttatttttaaattgttgattactgattaat 2325254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 11366158 - 11366259
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||| |||| |||| |||||| ||| ||| ||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||    
T  11366158 gggagcatctacggtgcagtcagaaaattgatttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgttgattactgattaatg 11366257  T
Q  728 at 729  Q
    ||    
T  11366258 at 11366259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 41465926 - 41465825
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||| || ||||||| ||| || |||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||| ||||||||||    
T  41465926 gggagtttatatggtgcagttagaaaactgacttttttgaaaaagttaattttgatcttaatgttcgattcaattttaaattgttgattgctgattaatg 41465827  T
Q  728 at 729  Q
    ||    
T  41465826 at 41465825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 4764057 - 4763955
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaa-gttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    ||||||||||| |||| ||| ||||||||||||||||  ||||| |||||||||||| | ||||||||||||||||||||||| ||||||||||||||||    
T  4764057 gggagcttctacggtgcagtaaggaaactgactttttaaaaaaaagttaattttgattttaatgtttgattcatttttaaattattgattactgattaat 4763958  T
Q  727 gat 729  Q
    |||    
T  4763957 gat 4763955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 651 - 729
Target Start/End: Original strand, 7006739 - 7006817
Alignment:
Q  651 gaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||| ||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||    
T  7006739 gaaaatgacttttttgaaaaagttaattttaatcataatgtttgattcatttttaaattgttgattactgattaatgat 7006817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 651 - 729
Target Start/End: Original strand, 43770649 - 43770727
Alignment:
Q  651 gaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| || |||||||||    
T  43770649 gaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgatttctaattaatgat 43770727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 26358002 - 26357901
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||||||   || ||| || ||| |||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  26358002 gggagcttctacattgcagttagaaaattgacttttttaaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 26357903  T
Q  728 at 729  Q
    ||    
T  26357902 at 26357901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 633 - 729
Target Start/End: Original strand, 33709015 - 33709111
Alignment:
Q  633 cttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||| |||| ||||| || ||||| ||||||||||||||||||||| || | ||||||||||||||||||||||||||||||| |||||||||||    
T  33709015 cttctacggtgcagtcatgatactgaattttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgttgattaatgattaatgat 33709111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 647 - 723
Target Start/End: Original strand, 39167166 - 39167242
Alignment:
Q  647 tcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgatt 723  Q
    |||| ||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||    
T  39167166 tcagaaaactgacttttttgaaaaagttaattttaatcttaatgttttattcatttttaaattgttgattactgatt 39167242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 630 - 729
Target Start/End: Complemental strand, 3177362 - 3177263
Alignment:
Q  630 gagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| |||| || | ||||||||||| ||||| ||||||||||||||| ||| |||||    
T  3177362 gagcttctacggtgcagtcaggaaactgacttttttgaaaaagttacttttaattttaatgtttgatttattttcaaattgttgattacttattcatgat 3177263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 651 - 729
Target Start/End: Complemental strand, 5881931 - 5881853
Alignment:
Q  651 gaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||| |||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||    
T  5881931 gaaactgatttttatgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgaataatgat 5881853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 629 - 726
Target Start/End: Complemental strand, 33902439 - 33902341
Alignment:
Q  629 ggagcttctatggtgtagtcaggaaactgacttttttgaaaaa-gttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    |||||||||| |||| | |||| ||||| |||||||| ||||| |||||||||||||| ||||||||||| |||||||||||||||||||| |||||||    
T  33902439 ggagcttctacggtgcaatcagaaaactaactttttttaaaaaagttaattttgatcttaatgtttgatttatttttaaattgttgattacagattaat 33902341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 19500695 - 19500794
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||| ||||||||||| |||||  ||| | |||||||||||||| | ||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  19500695 gggatcttctatggtgcagtcaaaaaatt-acttttttgaaaaaat-aattttgatcttaatatttgattcatttttaaattgttgattactgattaatg 19500792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 27349731 - 27349827
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    |||||||||||  ||| ||||| ||||||||||||| |||||||||||||||| |     || |||||||||||||||||||||||||||||||||||||    
T  27349731 gggagcttctacagtgcagtcatgaaactgacttttctgaaaaagttaattttaa-----atatttgattcatttttaaattgttgattactgattaatg 27349825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 645 - 729
Target Start/End: Original strand, 31570529 - 31570613
Alignment:
Q  645 agtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||| ||||||||||||||| |||||||||||||| || | |||| |||||||||||||||||  |||||||||||||||||||    
T  31570529 agtcatgaaactgactttttttaaaaagttaattttcattttaatgattgattcatttttaaatatttgattactgattaatgat 31570613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 667 - 726
Target Start/End: Original strand, 33550800 - 33550859
Alignment:
Q  667 aaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  33550800 aaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactggttaat 33550859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 656 - 729
Target Start/End: Complemental strand, 37906108 - 37906034
Alignment:
Q  656 tgacttttttgaaaaagttaattttgatctgaatgtttgatt-catttttaaattgttgattactgattaatgat 729  Q
    |||||||||||||||| ||||||||||| | ||||||||||| ||||||||||||||| ||||||||||||||||    
T  37906108 tgacttttttgaaaaaattaattttgattttaatgtttgatttcatttttaaattgttaattactgattaatgat 37906034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 659 - 729
Target Start/End: Complemental strand, 13711853 - 13711783
Alignment:
Q  659 cttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||||||||| |||||||| || | |||| ||||||||||||||||| ||||||||||||||||||||    
T  13711853 cttttttgaaaaaattaattttaatttaaatgattgattcatttttaaatcgttgattactgattaatgat 13711783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 630 - 729
Target Start/End: Original strand, 41051083 - 41051179
Alignment:
Q  630 gagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||||| |||| ||||| |||| |||   |||||||||| |||||||| || | |||||||||||||||||| |||||||||||| |||||||||||    
T  41051083 gagcttctacggtgcagtcatgaaaatga---ttttgaaaaaattaattttaattttaatgtttgattcatttttgaattgttgattattgattaatgat 41051179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 624 - 724
Target Start/End: Original strand, 17071544 - 17071646
Alignment:
Q  624 ttatgggagcttctatggtgtagtcaggaaa-ctgacttttttgaaa-aagttaattttgatctgaatgtttgattcatttttaaattgttgattactga 721  Q
    ||||||||||||||| |||| |||||| ||| ||||||||||| ||| ||   ||  ||||||| ||||||||||||||||||| |||||||||||||||    
T  17071544 ttatgggagcttctacggtgcagtcagaaaaactgacttttttaaaataaaaaaaaattgatcttaatgtttgattcatttttacattgttgattactga 17071643  T
Q  722 tta 724  Q
    |||    
T  17071644 tta 17071646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 624 - 724
Target Start/End: Original strand, 17053904 - 17054005
Alignment:
Q  624 ttatgggagcttctatggtgtagtcaggaaa-ctgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgat 722  Q
    ||||||||||||||| |||| |||||| ||| ||||||||||  || ||   ||  ||||||| ||||||||||||||||||| ||||||||||||||||    
T  17053904 ttatgggagcttctacggtgcagtcagaaaaactgactttttaaaataaaaaaaaattgatcttaatgtttgattcatttttacattgttgattactgat 17054003  T
Q  723 ta 724  Q
    ||    
T  17054004 ta 17054005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 652 - 729
Target Start/End: Original strand, 18257340 - 18257417
Alignment:
Q  652 aaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||||||| |||||||||||||||| || | |||  || ||||||||| ||||||| |||||||||||||||||    
T  18257340 aaactgacttttgtgaaaaagttaattttaatattaataatttattcattttaaaattgtcgattactgattaatgat 18257417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 660 - 729
Target Start/End: Original strand, 41463400 - 41463469
Alignment:
Q  660 ttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||| |||||||||||||| |||| |||| |||||||||||||||||| || |||| |||||||||||    
T  41463400 tttttttaaaaagttaattttaatcttaatgattgattcatttttaaattattaattattgattaatgat 41463469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 632 - 673
Target Start/End: Complemental strand, 6357201 - 6357160
Alignment:
Q  632 gcttctatggtgtagtcaggaaactgacttttttgaaaaagt 673  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  6357201 gcttctatggtgtagtcaagaaaatgacttttttgaaaaagt 6357160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 628 - 693
Target Start/End: Complemental strand, 36642361 - 36642296
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgttt 693  Q
    |||||||||||||||| | ||| |||| ||||||||||||||||| ||||||| || | |||||||    
T  36642361 gggagcttctatggtgcattcatgaaattgacttttttgaaaaagctaattttaattttaatgttt 36642296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 645 - 697
Target Start/End: Original strand, 4263704 - 4263756
Alignment:
Q  645 agtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgatt 697  Q
    ||||| |||||||| |||||| |||||||||||||| |||| |||||||||||    
T  4263704 agtcatgaaactgattttttttaaaaagttaattttaatcttaatgtttgatt 4263756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 632 - 675
Target Start/End: Original strand, 18514400 - 18514443
Alignment:
Q  632 gcttctatggtgtagtcaggaaactgacttttttgaaaaagtta 675  Q
    ||||||| |||| |||||||||||||| ||||||||||||||||    
T  18514400 gcttctacggtggagtcaggaaactgaattttttgaaaaagtta 18514443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 76; Significance: 1e-34; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 624 - 723
Target Start/End: Complemental strand, 267705 - 267606
Alignment:
Q  624 ttatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgatt 723  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  267705 ttatgggagattctatggtgcagtcaagaaactgacttttttgaaaaaattaattttgatcttaatatttgattcatttttaaattgttgattactgatt 267606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 70; Significance: 5e-31; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 8312 - 8211
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| |||||||||| |||||||||||| ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||||    
T  8312 gggagcttctacggtgcagtcaggaaattgacttttttgataaagttaattttgattttaacgattgattcatttttaaattgttgattactgattaatg 8213  T
Q  728 at 729  Q
    ||    
T  8212 at 8211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 70; Significance: 5e-31; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 145775 - 145876
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| |||| |||||||||| |||||||||||||||||||||||||||| | ||||||| ||||||||||||||| || ||||||||||||||    
T  145775 gggagcttctacggtgcagtcaggaaattgacttttttgaaaaagttaattttgattttaatgtttaattcatttttaaattttttattactgattaatg 145874  T
Q  728 at 729  Q
    ||    
T  145875 at 145876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 628 - 729
Target Start/End: Complemental strand, 44381 - 44280
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| | || |||||  ||||||||||||||||||||||| |||||||| | ||||||| |||||||||||||||||||||||||||||||||    
T  44381 gggagcttctacgatgcagtcaacaaactgacttttttgaaaaagttgattttgattttaatgtttaattcatttttaaattgttgattactgattaatg 44282  T
Q  728 at 729  Q
    ||    
T  44281 at 44280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 628 - 729
Target Start/End: Original strand, 154406 - 154507
Alignment:
Q  628 gggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatg 727  Q
    ||||||||||| | || |||||  ||||||||||||||||||||||| |||||||| | ||||||| |||||||||||||||||||||||||||||||||    
T  154406 gggagcttctacgatgcagtcaacaaactgacttttttgaaaaagttgattttgattttaatgtttaattcatttttaaattgttgattactgattaatg 154505  T
Q  728 at 729  Q
    ||    
T  154506 at 154507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 65; Significance: 5e-28; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 629 - 729
Target Start/End: Complemental strand, 12332 - 12233
Alignment:
Q  629 ggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatga 728  Q
    |||||||||| |||| ||||| |||||| |||||||| |||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||    
T  12332 ggagcttctacggtgcagtcatgaaacttacttttttaaaaaagttaattttaatcttaatgtttgatt-atttttaaattgttgattactgattaatga 12234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 54; Significance: 2e-21; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 664 - 729
Target Start/End: Complemental strand, 517 - 452
Alignment:
Q  664 ttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||    
T  517 ttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgat 452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 662 - 729
Target Start/End: Original strand, 408223 - 408290
Alignment:
Q  662 ttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaatgat 729  Q
    |||||||||| |||||||| || | |||||||||||||||||||||||||||||||||||||||||||    
T  408223 ttttgaaaaaattaatttttattttaatgtttgattcatttttaaattgttgattactgattaatgat 408290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 627 - 729
Target Start/End: Original strand, 93860 - 93961
Alignment:
Q  627 tgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaattttgatctgaatgtttgattcatttttaaattgttgattactgattaat 726  Q
    |||||| || || |||| ||| ||||||| ||| ||||| ||||||||||||||||| | ||||||||||||| ||||||||||||||||| ||||||||    
T  93860 tgggagtttttacggtgcagtaaggaaacggacctttttaaaaaagttaattttgattttaatgtttgattca-ttttaaattgttgattagtgattaat 93958  T
Q  727 gat 729  Q
    |||    
T  93959 gat 93961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 625 - 680
Target Start/End: Complemental strand, 745 - 690
Alignment:
Q  625 tatgggagcttctatggtgtagtcaggaaactgacttttttgaaaaagttaatttt 680  Q
    |||||||||||||| |||| ||||| |||| ||| |||||||||||||||||||||    
T  745 tatgggagcttctacggtgcagtcaagaaattgatttttttgaaaaagttaatttt 690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 348 - 462
Target Start/End: Complemental strand, 77863 - 77747
Alignment:
Q  348 tttaataggttttttctattgtattggctcttcaaaattgttggggaataccctttcaaagttaactctagctgcttgtaac--tctctattttatggaa 445  Q
    |||| |||| ||||||| || |||||||||||||||||||||||| ||||||| ||||| |||||| ||| ||| ||||||   |||||   ||||| ||    
T  77863 tttagtaggctttttctcttatattggctcttcaaaattgttgggaaataccccttcaatgttaacactaactgtttgtaatattctctgccttatgaaa 77764  T
Q  446 tgttaagctattgttta 462  Q
    |||||||||||||||||    
T  77763 tgttaagctattgttta 77747  T

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Target: scaffold0312 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 632 - 673
Target Start/End: Original strand, 8209 - 8250
Alignment:
Q  632 gcttctatggtgtagtcaggaaactgacttttttgaaaaagt 673  Q
    ||||||||||||| |||| |||| ||||||||||||||||||    
T  8209 gcttctatggtgttgtcaagaaaatgacttttttgaaaaagt 8250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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