View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4201-Insertion-3 (Length: 1017)

Name: NF4201-Insertion-3
Description: NF4201
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4201-Insertion-3
NF4201-Insertion-3
[»] chr7 (36 HSPs)
chr7 (153-1013)||(36221063-36221926)
chr7 (154-958)||(36217132-36217934)
chr7 (506-954)||(36225994-36226446)
chr7 (193-476)||(32727359-32727642)
chr7 (563-948)||(35982180-35982561)
chr7 (563-948)||(36003592-36003973)
chr7 (635-957)||(35973546-35973868)
chr7 (635-957)||(35994958-35995280)
chr7 (193-413)||(35981797-35982017)
chr7 (193-413)||(36003209-36003429)
chr7 (154-413)||(35946529-35946788)
chr7 (481-684)||(35939415-35939622)
chr7 (193-413)||(35977231-35977451)
chr7 (193-413)||(35998643-35998863)
chr7 (529-699)||(35958123-35958295)
chr7 (23-88)||(36221990-36222055)
chr7 (822-954)||(35977867-35977999)
chr7 (822-954)||(35999279-35999411)
chr7 (825-954)||(35958415-35958544)
chr7 (567-636)||(35965669-35965738)
chr7 (529-693)||(35946918-35947084)
chr7 (822-954)||(35947207-35947339)
chr7 (529-641)||(35977578-35977690)
chr7 (529-641)||(35998990-35999102)
chr7 (210-381)||(35939131-35939306)
chr7 (225-393)||(35957808-35957976)
chr7 (23-82)||(35938945-35939004)
chr7 (514-637)||(29602862-29602987)
chr7 (26-88)||(36217999-36218061)
chr7 (539-639)||(35955182-35955282)
chr7 (566-637)||(29750307-29750378)
chr7 (566-637)||(29743270-29743341)
chr7 (23-82)||(35981628-35981687)
chr7 (23-82)||(36003040-36003099)
chr7 (29-79)||(35977068-35977118)
chr7 (29-79)||(35998480-35998530)
[»] chr2 (1 HSPs)
chr2 (226-436)||(26328685-26328895)
[»] chr1 (6 HSPs)
chr1 (154-436)||(18117804-18118086)
chr1 (529-742)||(18125831-18126046)
chr1 (482-609)||(18118138-18118267)
chr1 (193-370)||(18125496-18125673)
chr1 (23-79)||(18125327-18125383)
chr1 (801-930)||(18126105-18126234)


Alignment Details
Target: chr7 (Bit Score: 763; Significance: 0; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 763; E-Value: 0
Query Start/End: Original strand, 153 - 1013
Target Start/End: Complemental strand, 36221926 - 36221063
Alignment:
Q  153 aaatgcccatttcacaaacaaatacaaatagctctcttgcgaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttacta 252  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  36221926 aaatgcccatttcacaaacaaatacaaacagctctcttgcgaaagaccttccaaaatatacgaaggaacagtactcatcatggaagcaattgagttacta 36221827  T
Q  253 cgtgtcgtcactatgactttactttcttctccaccaactttgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctagga 352  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36221826 catgtcgtcactatgactttactttcttctccaccaactttgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctagga 36221727  T
Q  353 cgaggataaacttttgaccagaaagtttatgtcttagacgaatttgtagttgctcaatatcaaaatggttaatgtcttcttggttagccatagcaacact 452  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36221726 tgaggataaacttttgaccagaaagtttatgtcttagacgaatttgtagttgctcaatatcaaaatggttaatgtcttcttggttagccatagcaacact 36221627  T
Q  453 tggtggagttgatgctgaagcaaaagctgagttgataattttgataataatgcgcctaatatcaaaatcattggaga--cacatccaaatcttcaattgg 550  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||    
T  36221626 tggtggagttgatgctgaagcaaaagcagagttgataattttgataataatgcgcctaatatcaaaatcattggagacacacacccaaatcttcaattgg 36221527  T
Q  551 aaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatgggaata--acacaaatttttgt 648  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  36221526 aaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatgggaataacacacaaatttttgt 36221427  T
Q  649 caccatctccatctccatgaggatgcggttgcatcaaaagtttgataatttcttccctatcattctccctcccaataacacttgaagcatcaacgtatga 748  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36221426 caccatctccatctccatgaggatgcggttgcatcaaaagtttgataatttcttccctgtcattctccctcccaataacacttgaagcatcaacgtatga 36221327  T
Q  749 atgagtgaattctctcctctgcacaacaggatcaggtgcaacatcgattctcgcaagtccaaaccttgtcccgtcagctgccaccttattcaatctattt 848  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  36221326 atgagtgaattctctcctctgcacaacaggatcaggtgcaacatcgattctcacaagtccaaaccttgtcccgtcagctgccaccttattcaatctatct 36221227  T
Q  849 ctaatctctttgattttatgtgacatcctaaaacggaaagctggtggatttgaggaagaaaacaagtggcataccttcattcgagtgctgccagaagctt 948  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36221226 ctaatctctttgattttatgtgacatcctaaaacggaaagctagtggatttgaggaagaaaacaagtggcataccttcattcgagtgctgccagaagctt 36221127  T
Q  949 tcacaaattgnnnnnnnncttgtcttgcaactcaaatccatcttcagcatcatagcagatgtttt 1013  Q
    |||| ||||         |||||||||||||||||||||||||||||||||||||||||||||||    
T  36221126 tcac-aattttattttttcttgtcttgcaactcaaatccatcttcagcatcatagcagatgtttt 36221063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 284; E-Value: 1e-158
Query Start/End: Original strand, 154 - 958
Target Start/End: Complemental strand, 36217934 - 36217132
Alignment:
Q  154 aatgcccatttcacaaacaaatacaaatagctctcttgcgaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttactac 253  Q
    ||||||||||||||||||| | ||||| |   ||||  ||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||| ||||    
T  36217934 aatgcccatttcacaaacagagacaaacaatcctctaacgaaagaccttccaaaacatacgaaggaacagtacccatcatggaagcaactgagttgctac 36217835  T
Q  254 gtgtcgtcactatgactttactttcttctccaccaactttgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctaggac 353  Q
    |||| |||||||| | ||||||| || || |||||||||||||||||| |  ||||||||||||||||||||| ||||||||||||| ||||||||| ||    
T  36217834 gtgtggtcactataattttacttcctactgcaccaactttgatcaaatcttccaactcaatccattttgcacgatcatcattccatacatcatctagcac 36217735  T
Q  354 gaggataaacttttgaccagaaagtttatgtcttagacgaatttgtagttgctcaatatcaaaatggttaatgtcttcttggttagccatagcaacactt 453  Q
    ||||||||||||||| ||||| |||||| |||||||| ||||||||||||||||||| ||| | |||||| | |||||||||  ||| |||| |||||||    
T  36217734 gaggataaacttttggccagatagtttacgtcttagatgaatttgtagttgctcaatgtcacagtggttactatcttcttggggagcaataggaacactt 36217635  T
Q  454 ggtggagttgatgctgaagcaaaagctgagttgataattttgataataatgcgcctaatatcaaaatcattggagacacat--ccaaatcttcaattgga 551  Q
    |||| |      |||||||||||| | |||||||||||||||||||  ||  | || ||||||||||||   |||||||||  ||| ||||||||||| |    
T  36217634 ggtgca------gctgaagcaaaaacggagttgataattttgataacgatctgtcttatatcaaaatcaacagagacacatgcccacatcttcaattgaa 36217541  T
Q  552 aaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatgggaataacac--aaatttttgtc 649  Q
    |||  ||||||||||||||||||||| |||||||  |||||||||||||||||||||| || |||||||| ||||||||||||||||  ||| || | |     
T  36217540 aaacttcatctatcctcttatcattgtacaccaattttgcaagtgtggtcttccccaatcctccaattcccactatgggaataacacataaacttctatg 36217441  T
Q  650 accatctccatctccatgaggatgcggttgcatcaaaagtttgataatttcttccctatcattctccctcccaataacacttgaagcatcaacgtatgaa 749  Q
    ||||| |||||  || |||||||  |  | ||||||||| | ||||||| ||||| | ||||||||||| || |||||||||||| ||||||  |  |||    
T  36217440 accatttccataaccttgaggatcggaatccatcaaaagctcgataattgcttccttgtcattctcccttcctataacacttgaaacatcaatatgggaa 36217341  T
Q  750 tgagtgaattctctcctctgcacaacaggatcaggtgcaacatcgattctcgcaagtccaaaccttgtcccgtcagctgccaccttattcaatctatttc 849  Q
    |  |||| ||||||  | ||||||  | |  | ||  ||||||  |||||| ||||||||||| | ||||| ||||||||||| |||| |||||||| ||    
T  36217340 taggtgatttctctattgtgcacagaaagtccgggctcaacatgaattctcacaagtccaaacttggtcccatcagctgccactttatccaatctatctc 36217241  T
Q  850 taatctctttgattttatgtgacatcctaaaacggaaagctggtggatttgaggaagaaaacaagtggcataccttcattcgagtgctgccagaagcttt 949  Q
    ||||||||||||||| | ||||||||||||||||||||||  | ||||| ||||||||||| ||||||||||||||||  || ||||| ||||||||||     
T  36217240 taatctctttgatttgacgtgacatcctaaaacggaaagcaagcggattagaggaagaaaagaagtggcataccttcaaccgtgtgcttccagaagcttc 36217141  T
Q  950 cacaaattg 958  Q
     ||||||||    
T  36217140 aacaaattg 36217132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 147; E-Value: 6e-77
Query Start/End: Original strand, 506 - 954
Target Start/End: Original strand, 36225994 - 36226446
Alignment:
Q  506 gcctaatatcaaaatcattggaga--cacatccaaatcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtctt 603  Q
    ||||||||||||||||||  ||||  |||| ||| |||||||||||||||| |||||| | ||||||||| |||||||||||  ||||||||||||||||    
T  36225994 gcctaatatcaaaatcatcagagatacacacccacatcttcaattggaaaagatcatcaaccctcttatcgttgaacaccaattttgcaagtgtggtctt 36226093  T
Q  604 ccccaagccaccaattccaactatgggaata--acacaaatttttgtcaccatctccatctccatgaggatgcggttgcatcaaaagtttgataatttct 701  Q
    |||||||||||||||||| ||||||||||||  ||||||| |||| ||||||||  |||| || |||||||| || ||||||||||| |||||||| ||     
T  36226094 ccccaagccaccaattcccactatgggaataacacacaaacttttatcaccatcagcatcaccttgaggatgtggctgcatcaaaagcttgataatatca 36226193  T
Q  702 tccctatcattctccctcccaataacacttgaagcatcaacgtatgaatgagtgaattctctcctctgcacaacaggatcaggtgcaacatcgattctcg 801  Q
    | ||| ||||||||||| || || |||  ||||||||||||||  |||||||| | ||||||| |||||||| || |  |     |||||   |||   |    
T  36226194 ttcctctcattctcccttcctatcacatctgaagcatcaacgtgggaatgagtcatttctctcttctgcacagcaagtcctaaatcaacactaattgctg 36226293  T
Q  802 caagtccaaaccttgtcccgtcagctgccaccttattcaatctatttctaatctctttgattttatgtgacatcctaaaacggaaagctggtggatttga 901  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||  |||||||||||||||  |  || |||| |||||||||||||  ||||| | ||    
T  36226294 caagtccaaacctagtcccatcagctgccaccttattcaatctatccctaatctctttgattcgacatgccatcttaaaacggaaagcaagtggactaga 36226393  T
Q  902 ggaagaaaacaagtggcataccttcattcgagtgctgccagaagctttcacaa 954  Q
    ||||||||| || |||| ||||||||| | ||||||||  ||||||| |||||    
T  36226394 ggaagaaaaaaattggcgtaccttcatcctagtgctgcatgaagcttccacaa 36226446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 193 - 476
Target Start/End: Original strand, 32727359 - 32727642
Alignment:
Q  193 gaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttactacgtgtcgtcactatgactttactttcttctccaccaactt 292  Q
    ||||||||||||||||  ||||| |||| | |||||||||| ||||||| |||||| ||||||||||||||||||| ||| ||| || || |||| ||||    
T  32727359 gaaagaccttccaaaacgtacgagggaatagtacccatcattgaagcaaatgagttgctacgtgtcgtcactatgattttgcttcctgctgcaccgactt 32727458  T
Q  293 tgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctaggacgaggataaacttttgaccagaaagtttatgtcttagacg 392  Q
    | ||||||| || ||||||||||||||||||||| ||||||||||||||||| |||||||| || | |||||| ||||||| |||||||||||||  |||    
T  32727459 ttatcaaatctatcaactcaatccattttgcacgatcatcattccatatatcgtctaggacaagcaaaaacttctgaccagcaagtttatgtctttaacg 32727558  T
Q  393 aatttgtagttgctcaatatcaaaatggttaatgtcttcttggttagccatagcaacacttggtggagttgatgctgaagcaaa 476  Q
    | ||||||| |||||||||||||| | ||| |||| |||||||| ||| | || |||||||||||||  ||| |||| ||||||    
T  32727559 actttgtagctgctcaatatcaaagttgttgatgttttcttggtgagcaagagaaacacttggtggaactgaagctggagcaaa 32727642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 563 - 948
Target Start/End: Original strand, 35982180 - 35982561
Alignment:
Q  563 atcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatgggaataacacaaatttttgtcaccatctccatct 662  Q
    ||||||| ||||||||| |||||  |||||||||| ||||| ||||| || |||||||| || |||||||||||||| |   || |    ||| |||||     
T  35982180 atcctctcatcattgaaaaccaattttgcaagtgtagtctttcccaaacctccaattcccacaatgggaataacacataagctttt----atcaccatca 35982275  T
Q  663 ccatgaggatgcggttgcatcaaaagtttgataatttcttccctatcattctccctcccaataacacttgaagcatcaacgtatgaatgagtgaattctc 762  Q
    || |||||||| ||| |||||||||| ||||||||||| |||||||| ||||| || || || |||    |||||||||| |  |||||||| |||||||    
T  35982276 ccttgaggatgtggtagcatcaaaagcttgataatttcatccctatccttctctcttcctatcacatccaaagcatcaacatgggaatgagtcaattctc 35982375  T
Q  763 tcctctgcacaacaggatcaggtgcaacatcgattctcgcaagtccaaaccttgtcccgtcagctgccaccttattcaatctatttctaatctctttgat 862  Q
    |  | ||||||| | |  ||||  ||||||| ||||||  |||||||||| | ||||| ||||||||||||||||  |||||||| ||||| ||||||||    
T  35982376 ttttttgcacaatatgtccaggatcaacatcaattctcataagtccaaacttagtcccatcagctgccaccttatctaatctattcctaatttctttgat 35982475  T
Q  863 tttatgtgacatcctaaaacggaaagctggtggatttgaggaagaaaacaagtggcataccttcattcgagtgctgccagaagctt 948  Q
    |  ||||| |||||||| ||| |||||  ||||||| ||||||||||| ||||||| ||||||| | |||||||||||||||||||    
T  35982476 tcgatgtgccatcctaagacgaaaagcaagtggattagaggaagaaaagaagtggcgtaccttcgtccgagtgctgccagaagctt 35982561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 563 - 948
Target Start/End: Original strand, 36003592 - 36003973
Alignment:
Q  563 atcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatgggaataacacaaatttttgtcaccatctccatct 662  Q
    ||||||| ||||||||| |||||  |||||||||| ||||| ||||| || |||||||| || |||||||||||||| |   || |    ||| |||||     
T  36003592 atcctctcatcattgaaaaccaattttgcaagtgtagtctttcccaaacctccaattcccacaatgggaataacacataagctttt----atcaccatca 36003687  T
Q  663 ccatgaggatgcggttgcatcaaaagtttgataatttcttccctatcattctccctcccaataacacttgaagcatcaacgtatgaatgagtgaattctc 762  Q
    || |||||||| ||| |||||||||| ||||||||||| |||||||| ||||| || || || |||    |||||||||| |  |||||||| |||||||    
T  36003688 ccttgaggatgtggtagcatcaaaagcttgataatttcatccctatccttctctcttcctatcacatccaaagcatcaacatgggaatgagtcaattctc 36003787  T
Q  763 tcctctgcacaacaggatcaggtgcaacatcgattctcgcaagtccaaaccttgtcccgtcagctgccaccttattcaatctatttctaatctctttgat 862  Q
    |  | ||||||| | |  ||||  ||||||| ||||||  |||||||||| | ||||| ||||||||||||||||  |||||||| ||||| ||||||||    
T  36003788 ttttttgcacaatatgtccaggatcaacatcaattctcataagtccaaacttagtcccatcagctgccaccttatctaatctattcctaatttctttgat 36003887  T
Q  863 tttatgtgacatcctaaaacggaaagctggtggatttgaggaagaaaacaagtggcataccttcattcgagtgctgccagaagctt 948  Q
    |  ||||| |||||||| ||| |||||  ||||||| ||||||||||| ||||||| ||||||| | |||||||||||||||||||    
T  36003888 tcgatgtgccatcctaagacgaaaagcaagtggattagaggaagaaaagaagtggcgtaccttcgtccgagtgctgccagaagctt 36003973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 635 - 957
Target Start/End: Original strand, 35973546 - 35973868
Alignment:
Q  635 acacaaatttttgtcaccatctccatctccatgaggatgcggttgcatcaaaagtttgataatttcttccctatcattctccctcccaataacacttgaa 734  Q
    ||||||| |||| ||||| |||||||| || |||||| | |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  35973546 acacaaacttttatcaccgtctccatcaccttgaggacgtggttgcatcagaagcttgataatttcttccctatcattctccctcccaataacacttgaa 35973645  T
Q  735 gcatcaacgtatgaatgagtgaattctctcctctgcacaacaggatcaggtgcaacatcgattctcgcaagtccaaaccttgtcccgtcagctgccacct 834  Q
    ||||| || |  |||| ||| ||||||||||| |||| |||| | |||||  ||   |||||| ||||||| |||||| |  |||| || ||||| ||||    
T  35973646 gcatcgacatgggaattagtcaattctctcctatgcaaaacaagttcaggaccattgtcgattttcgcaagaccaaacttgttcccatcggctgctacct 35973745  T
Q  835 tattcaatctatttctaatctctttgattttatgtgacatcctaaaacggaaagctggtggatttgaggaagaaaacaagtggcataccttcattcgagt 934  Q
    ||| ||| ||||  | |||  ||||||| | |||   ||| ||| |||||||| |  ||||||| ||||| ||||| |||| || ||||||||| |  ||    
T  35973746 tatccaacctatcccgaatgcctttgatctgatggtccattctagaacggaaaacaagtggattggaggaggaaaagaagtagcttaccttcatgctcgt 35973845  T
Q  935 gctgccagaagctttcacaaatt 957  Q
    |||||||||||| | ||||||||    
T  35973846 gctgccagaagcatccacaaatt 35973868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 635 - 957
Target Start/End: Original strand, 35994958 - 35995280
Alignment:
Q  635 acacaaatttttgtcaccatctccatctccatgaggatgcggttgcatcaaaagtttgataatttcttccctatcattctccctcccaataacacttgaa 734  Q
    ||||||| |||| ||||| |||||||| || |||||| | |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  35994958 acacaaacttttatcaccgtctccatcaccttgaggacgtggttgcatcagaagcttgataatttcttccctatcattctccctcccaataacacttgaa 35995057  T
Q  735 gcatcaacgtatgaatgagtgaattctctcctctgcacaacaggatcaggtgcaacatcgattctcgcaagtccaaaccttgtcccgtcagctgccacct 834  Q
    ||||| || |  |||| ||| ||||||||||| |||| |||| | |||||  ||   |||||| ||||||| |||||| |  |||| || ||||| ||||    
T  35995058 gcatcgacatgggaattagtcaattctctcctatgcaaaacaagttcaggaccattgtcgattttcgcaagaccaaacttgttcccatcggctgctacct 35995157  T
Q  835 tattcaatctatttctaatctctttgattttatgtgacatcctaaaacggaaagctggtggatttgaggaagaaaacaagtggcataccttcattcgagt 934  Q
    ||| ||| ||||  | |||  ||||||| | |||   ||| ||| |||||||| |  ||||||| ||||| ||||| |||| || ||||||||| |  ||    
T  35995158 tatccaacctatcccgaatgcctttgatctgatggtccattctagaacggaaaacaagtggattggaggaggaaaagaagtagcttaccttcatgctcgt 35995257  T
Q  935 gctgccagaagctttcacaaatt 957  Q
    |||||||||||| | ||||||||    
T  35995258 gctgccagaagcatccacaaatt 35995280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 193 - 413
Target Start/End: Original strand, 35981797 - 35982017
Alignment:
Q  193 gaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttactacgtgtcgtcactatgactttactttcttctccaccaactt 292  Q
    |||||||||| ||||| ||||| |||||||  ||||||||| |||| |||||||||||||||||| ||||| |  | ||| ||| |  || | |||||||    
T  35981797 gaaagacctttcaaaagatacggaggaacatcacccatcatcgaagaaattgagttactacgtgtagtcaccaaaattttgcttccagctgcgccaactt 35981896  T
Q  293 tgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctaggacgaggataaacttttgaccagaaagtttatgtcttagacg 392  Q
    ||||||||| |  ||||||||||||||||||||| ||||||||||  | |||||| |  || || | ||||||||| |  ||||||||||||||||||||    
T  35981897 tgatcaaatctttcaactcaatccattttgcacgatcatcattccgcacatcatccaacacaagtaaaaacttttgtctggaaagtttatgtcttagacg 35981996  T
Q  393 aatttgtagttgctcaatatc 413  Q
    | |||||||||||||||||||    
T  35981997 agtttgtagttgctcaatatc 35982017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 193 - 413
Target Start/End: Original strand, 36003209 - 36003429
Alignment:
Q  193 gaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttactacgtgtcgtcactatgactttactttcttctccaccaactt 292  Q
    |||||||||| ||||| ||||| |||||||  ||||||||| |||| |||||||||||||||||| ||||| |  | ||| ||| |  || | |||||||    
T  36003209 gaaagacctttcaaaagatacggaggaacatcacccatcatcgaagaaattgagttactacgtgtagtcaccaaaattttgcttccagctgcgccaactt 36003308  T
Q  293 tgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctaggacgaggataaacttttgaccagaaagtttatgtcttagacg 392  Q
    ||||||||| |  ||||||||||||||||||||| ||||||||||  | |||||| |  || || | ||||||||| |  ||||||||||||||||||||    
T  36003309 tgatcaaatctttcaactcaatccattttgcacgatcatcattccgcacatcatccaacacaagtaaaaacttttgtctggaaagtttatgtcttagacg 36003408  T
Q  393 aatttgtagttgctcaatatc 413  Q
    | |||||||||||||||||||    
T  36003409 agtttgtagttgctcaatatc 36003429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 154 - 413
Target Start/End: Original strand, 35946529 - 35946788
Alignment:
Q  154 aatgcccatttcacaaacaaatacaaatagctctcttgcgaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttactac 253  Q
    ||||||||||| ||||||| | ||||| |  ||| | | |||||||||||||||||||| | |||||||  ||||||||| |||||||||| |||||| |    
T  35946529 aatgcccatttgacaaacagagacaaacaattctttggagaaagaccttccaaaatatatggaggaacatcacccatcatcgaagcaattgcgttactgc 35946628  T
Q  254 gtgtcgtcactatgactttactttcttctccaccaactttgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctaggac 353  Q
    |||| ||||| || | ||| ||| ||  | |||||||||| ||||||| |  ||| |||| ||| |||||||| |||||||||||||  |||||||  ||    
T  35946629 gtgttgtcaccataattttgcttcctggtgcaccaacttttatcaaatctttcaattcaagccactttgcacgatcatcattccatacgtcatctaacac 35946728  T
Q  354 gaggataaacttttgaccagaaagtttatgtcttagacgaatttgtagttgctcaatatc 413  Q
    ||  | ||||||||||||||||||||| |||||||||||| ||  ||||||| |||||||    
T  35946729 gactaaaaacttttgaccagaaagtttttgtcttagacgacttactagttgcacaatatc 35946788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 481 - 684
Target Start/End: Original strand, 35939415 - 35939622
Alignment:
Q  481 gagttgataattttgataataatgcgcctaatatcaaaatcattggagacacat--ccaaatcttcaattggaaaatatcatctatcctcttatcattga 578  Q
    |||||||| ||||| ||||| ||  |||| |||||||| ||||||||||||||   ||| ||||||||||||||||  | ||  | ||||||||||||||    
T  35939415 gagttgattattttaataattatctgcctgatatcaaactcattggagacacacaaccacatcttcaattggaaaagttgattcaccctcttatcattga 35939514  T
Q  579 acaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatgggaataacac--aaatttttgtcaccatctccatctccatgaggatgcgg 676  Q
    |||||||| ||||||||||||||||||| || || |||||||| || |||||||||||||  ||| |||| |||||||| ||||| || |||||||| ||    
T  35939515 acaccaactttgcaagtgtggtcttccctaatcctccaattcccacaatgggaataacacataaacttttatcaccatcaccatcaccgtgaggatgtgg 35939614  T
Q  677 ttgcatca 684  Q
    ||||||||    
T  35939615 ttgcatca 35939622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 193 - 413
Target Start/End: Original strand, 35977231 - 35977451
Alignment:
Q  193 gaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttactacgtgtcgtcactatgactttactttcttctccaccaactt 292  Q
    |||||||||| ||||| ||| | |||||||  ||||||||| ||||||||||||||||||||||| ||||| || | ||| ||| ||  | |||||||||    
T  35977231 gaaagacctttcaaaagatatggaggaacatcacccatcatcgaagcaattgagttactacgtgttgtcacgataattttgcttcctggtgcaccaactt 35977330  T
Q  293 tgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctaggacgaggataaacttttgaccagaaagtttatgtcttagacg 392  Q
    | ||||||| |  ||| |||| ||| |||||||| |||||||||||||  |||||||  ||||  | ||||||||||||||||||||| ||||| |||||    
T  35977331 ttatcaaatctttcaattcaagccactttgcacgatcatcattccatacgtcatctaacacgactaaaaacttttgaccagaaagtttttgtctgagacg 35977430  T
Q  393 aatttgtagttgctcaatatc 413  Q
    | ||  ||||||| |||||||    
T  35977431 acttactagttgcacaatatc 35977451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 193 - 413
Target Start/End: Original strand, 35998643 - 35998863
Alignment:
Q  193 gaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttactacgtgtcgtcactatgactttactttcttctccaccaactt 292  Q
    |||||||||| ||||| ||| | |||||||  ||||||||| ||||||||||||||||||||||| ||||| || | ||| ||| ||  | |||||||||    
T  35998643 gaaagacctttcaaaagatatggaggaacatcacccatcatcgaagcaattgagttactacgtgttgtcacgataattttgcttcctggtgcaccaactt 35998742  T
Q  293 tgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctaggacgaggataaacttttgaccagaaagtttatgtcttagacg 392  Q
    | ||||||| |  ||| |||| ||| |||||||| |||||||||||||  |||||||  ||||  | ||||||||||||||||||||| ||||| |||||    
T  35998743 ttatcaaatctttcaattcaagccactttgcacgatcatcattccatacgtcatctaacacgactaaaaacttttgaccagaaagtttttgtctgagacg 35998842  T
Q  393 aatttgtagttgctcaatatc 413  Q
    | ||  ||||||| |||||||    
T  35998843 acttactagttgcacaatatc 35998863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 529 - 699
Target Start/End: Original strand, 35958123 - 35958295
Alignment:
Q  529 acacatccaaatcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatg 628  Q
    ||||| ||| |||||||| |||||||  | ||| ||||||||||||||||||||| || |||||||||| ||||| ||||| || |||||||| |||||     
T  35958123 acacacccacatcttcaactggaaaagttgatccatcctcttatcattgaacaccgactttgcaagtgttgtctttcccaaacctccaattcccactatt 35958222  T
Q  629 ggaataacac--aaatttttgtcaccatctccatctccatgaggatgcggttgcatcaaaagtttgataattt 699  Q
    ||||| ||||  | | | || |||||||| ||||||||  ||||||| || ||||||||||| ||||||||||    
T  35958223 ggaatgacacagagactattatcaccatcaccatctccgcgaggatgtggctgcatcaaaagattgataattt 35958295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 36222055 - 36221990
Alignment:
Q  23 atttaaatcaaattttgagaatagagaacttcctaatgttttgacagccagcggaactccagcaca 88  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  36222055 atttaaatcaaattttgataacagagaacttcctaatgttttgacagccagcggaactccagcaca 36221990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 822 - 954
Target Start/End: Original strand, 35977867 - 35977999
Alignment:
Q  822 tcagctgccaccttattcaatctatttctaatctctttgattttatgtgacatcctaaaacggaaagctggtggatttgaggaagaaaacaagtggcata 921  Q
    |||||||||||||||| || |||||  |||||||||||||||| | ||| |||||||||||||||| |  ||||||| ||||||||||| ||||||| ||    
T  35977867 tcagctgccaccttatccattctatccctaatctctttgatttgacgtgccatcctaaaacggaaaacaagtggattagaggaagaaaagaagtggcgta 35977966  T
Q  922 ccttcattcgagtgctgccagaagctttcacaa 954  Q
    ||||||  ||  |||| | ||||||||||||||    
T  35977967 ccttcacccgtctgcttcgagaagctttcacaa 35977999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 822 - 954
Target Start/End: Original strand, 35999279 - 35999411
Alignment:
Q  822 tcagctgccaccttattcaatctatttctaatctctttgattttatgtgacatcctaaaacggaaagctggtggatttgaggaagaaaacaagtggcata 921  Q
    |||||||||||||||| || |||||  |||||||||||||||| | ||| |||||||||||||||| |  ||||||| ||||||||||| ||||||| ||    
T  35999279 tcagctgccaccttatccattctatccctaatctctttgatttgacgtgccatcctaaaacggaaaacaagtggattagaggaagaaaagaagtggcgta 35999378  T
Q  922 ccttcattcgagtgctgccagaagctttcacaa 954  Q
    ||||||  ||  |||| | ||||||||||||||    
T  35999379 ccttcacccgtctgcttcgagaagctttcacaa 35999411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 825 - 954
Target Start/End: Original strand, 35958415 - 35958544
Alignment:
Q  825 gctgccaccttattcaatctatttctaatctctttgattttatgtgacatcctaaaacggaaagctggtggatttgaggaagaaaacaagtggcatacct 924  Q
    ||||||||||||| ||||||||  ||||||||||||||||  || | |||  |||||||||||||  ||| ||| ||||||||||||||||||| |||||    
T  35958415 gctgccaccttatccaatctatccctaatctctttgatttggtgcgccattttaaaacggaaagcaagtgaattagaggaagaaaacaagtggcgtacct 35958514  T
Q  925 tcattcgagtgctgccagaagctttcacaa 954  Q
    |||  || ||||| |||||||||| |||||    
T  35958515 tcacccgtgtgcttccagaagcttccacaa 35958544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 567 - 636
Target Start/End: Original strand, 35965669 - 35965738
Alignment:
Q  567 tcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatgggaataac 636  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||| | ||||||||||||    
T  35965669 tcttatcattgaacaccaagtttgcaagtgtggtcttccccaagccaccaattcctagtatgggaataac 35965738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 529 - 693
Target Start/End: Original strand, 35946918 - 35947084
Alignment:
Q  529 acacatccaaatcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatg 628  Q
    ||||| ||| |||||||| |||||||  | || |||||||||||||||||||||| || | |||||||||||||||| ||| || |||||||| |||||     
T  35946918 acacacccacatcttcaactggaaaagttgatgtatcctcttatcattgaacaccgacttcgcaagtgtggtcttccacaaacctccaattcccactatt 35947017  T
Q  629 ggaataacac--aaatttttgtcaccatctccatctccatgaggatgcggttgcatcaaaagtttga 693  Q
    ||||| ||||  | | | || |||||||| ||||| || |||||||| || ||||||||||| ||||    
T  35947018 ggaatgacacagagactattatcaccatcaccatcgccgtgaggatgtggctgcatcaaaagattga 35947084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 822 - 954
Target Start/End: Original strand, 35947207 - 35947339
Alignment:
Q  822 tcagctgccaccttattcaatctatttctaatctctttgattttatgtgacatcctaaaacggaaagctggtggatttgaggaagaaaacaagtggcata 921  Q
    |||||||||||||||| || |||||  |||||||||||||||| | ||| |||||||||||| ||| |  ||||||| ||||||||||| ||||||  ||    
T  35947207 tcagctgccaccttatccattctatccctaatctctttgatttgacgtgccatcctaaaacgaaaaacaagtggattagaggaagaaaagaagtggacta 35947306  T
Q  922 ccttcattcgagtgctgccagaagctttcacaa 954  Q
     |||||  || ||||| | ||||||||||||||    
T  35947307 acttcacccgtgtgcttcgagaagctttcacaa 35947339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 529 - 641
Target Start/End: Original strand, 35977578 - 35977690
Alignment:
Q  529 acacatccaaatcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatg 628  Q
    ||||| ||| |||||||| |||||||  | ||| ||||||||||||||||||||| || ||||||  |||||||||||||| || |||||||| |||||     
T  35977578 acacacccacatcttcaactggaaaagttgatccatcctcttatcattgaacaccgactttgcaatggtggtcttccccaaacctccaattcccactatt 35977677  T
Q  629 ggaataacacaaa 641  Q
    ||||| |||||||    
T  35977678 ggaatgacacaaa 35977690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 529 - 641
Target Start/End: Original strand, 35998990 - 35999102
Alignment:
Q  529 acacatccaaatcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatg 628  Q
    ||||| ||| |||||||| |||||||  | ||| ||||||||||||||||||||| || ||||||  |||||||||||||| || |||||||| |||||     
T  35998990 acacacccacatcttcaactggaaaagttgatccatcctcttatcattgaacaccgactttgcaatggtggtcttccccaaacctccaattcccactatt 35999089  T
Q  629 ggaataacacaaa 641  Q
    ||||| |||||||    
T  35999090 ggaatgacacaaa 35999102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 210 - 381
Target Start/End: Original strand, 35939131 - 35939306
Alignment:
Q  210 atacgaaggaacaatacccatcatggaagcaattgagttactacgtgtcgtcactatgactttactttcttctccaccaactttgatcaaatttaacaac 309  Q
    |||||| |||||| | ||| |||| |||||||| || ||||| ||||| ||||| |||| ||| | |||| ||   |||||||| ||||||| |  ||||    
T  35939131 atacgagggaacagtgcccgtcattgaagcaatcgatttactgcgtgttgtcacaatgattttgcattctactgtgccaacttttatcaaatctttcaac 35939230  T
Q  310 tcaatccattttgcacggtcatc----attccatatatcatctaggacgaggataaacttttgaccagaaagttta 381  Q
    ||||||||||||| ||| |||||    ||||||||| |||||||  ||||| | ||||||||||||||||||||||    
T  35939231 tcaatccattttgaacgatcatccatcattccatatgtcatctaacacgagtaaaaacttttgaccagaaagttta 35939306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 225 - 393
Target Start/End: Original strand, 35957808 - 35957976
Alignment:
Q  225 acccatcatggaagcaattgagttactacgtgtcgtcactatgactttactttcttctccaccaactttgatcaaatttaacaactcaatccattttgca 324  Q
    ||||||||| ||||||||||||||||| ||||| ||||| || | ||| ||| ||  | |||||||||| ||||| |  | ||| |||| ||| ||||||    
T  35957808 acccatcattgaagcaattgagttactgcgtgttgtcacgataattttgcttcctggtgcaccaacttttatcaattcgatcaattcaagccactttgca 35957907  T
Q  325 cggtcatcattccatatatcatctaggacgaggataaacttttgaccagaaagtttatgtcttagacga 393  Q
    || |||||||||||||  |||||||  || |  | ||||||||||||||||||||| ||| | ||||||    
T  35957908 cgatcatcattccatacgtcatctaacacaactaaaaacttttgaccagaaagtttttgtttgagacga 35957976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 35938945 - 35939004
Alignment:
Q  23 atttaaatcaaattttgagaatagagaacttcctaatgttttgacagccagcggaactcc 82  Q
    |||||||||||||||||| || |||||||||||||||||||| |||||||| ||||||||    
T  35938945 atttaaatcaaattttgaaaacagagaacttcctaatgttttcacagccagtggaactcc 35939004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 514 - 637
Target Start/End: Original strand, 29602862 - 29602987
Alignment:
Q  514 tcaaaatcattggagacacat--ccaaatcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagc 611  Q
    |||||||||| |||||||||   ||| ||||| ||| ||||| | || ||||  ||||||||||||||||||  | |||||||||| ||||| |||||||    
T  29602862 tcaaaatcatcggagacacacacccacatctttaatgggaaagtctcgtctaaactcttatcattgaacaccgtctttgcaagtgtagtctttcccaagc 29602961  T
Q  612 caccaattccaactatgggaataaca 637  Q
    | ||||||||||| || |||||||||    
T  29602962 ctccaattccaacaataggaataaca 29602987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 36218061 - 36217999
Alignment:
Q  26 taaatcaaattttgagaatagagaacttcctaatgttttgacagccagcggaactccagcaca 88  Q
    |||||||||||||||||| |||||||||||||  ||| | |||||||||||||||||||||||    
T  36218061 taaatcaaattttgagaacagagaacttcctaccgttctcacagccagcggaactccagcaca 36217999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 539 - 639
Target Start/End: Original strand, 35955182 - 35955282
Alignment:
Q  539 atcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatgggaataacac 638  Q
    |||||||||| |||||| | ||| | ||| | |||||||||||| ||| |||||||||||||||| ||||| || ||||| || | ||||||||||||||    
T  35955182 atcttcaatttgaaaatttgatccaccctttcatcattgaacactaactttgcaagtgtggtctttcccaatcctccaatacctattatgggaataacac 35955281  T
Q  639 a 639  Q
    |    
T  35955282 a 35955282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 566 - 637
Target Start/End: Complemental strand, 29750378 - 29750307
Alignment:
Q  566 ctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatgggaataaca 637  Q
    ||||||||||||||||||  | |||||||||| ||||| |||||||| ||||||||||| || |||||||||    
T  29750378 ctcttatcattgaacaccgtctttgcaagtgtagtctttcccaagcctccaattccaacaataggaataaca 29750307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 566 - 637
Target Start/End: Complemental strand, 29743341 - 29743270
Alignment:
Q  566 ctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatgggaataaca 637  Q
    |||||||||||||||||   | ||||||| || ||||| |||||||| ||||||||||| || |||||||||    
T  29743341 ctcttatcattgaacactgtctttgcaagcgtagtctttcccaagcctccaattccaacaataggaataaca 29743270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 35981628 - 35981687
Alignment:
Q  23 atttaaatcaaattttgagaatagagaacttcctaatgttttgacagccagcggaactcc 82  Q
    |||||||||||  ||||| || || ||||||||||||||||||||||| || ||||||||    
T  35981628 atttaaatcaagctttgaaaacagggaacttcctaatgttttgacagctagtggaactcc 35981687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 36003040 - 36003099
Alignment:
Q  23 atttaaatcaaattttgagaatagagaacttcctaatgttttgacagccagcggaactcc 82  Q
    |||||||||||  ||||| || || ||||||||||||||||||||||| || ||||||||    
T  36003040 atttaaatcaagctttgaaaacagggaacttcctaatgttttgacagctagtggaactcc 36003099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 35977068 - 35977118
Alignment:
Q  29 atcaaattttgagaatagagaacttcctaatgttttgacagccagcggaac 79  Q
    |||||| |||||||| |||||||||||||||||| | ||||| ||||||||    
T  35977068 atcaaagtttgagaagagagaacttcctaatgttctcacagctagcggaac 35977118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 35998480 - 35998530
Alignment:
Q  29 atcaaattttgagaatagagaacttcctaatgttttgacagccagcggaac 79  Q
    |||||| |||||||| |||||||||||||||||| | ||||| ||||||||    
T  35998480 atcaaagtttgagaagagagaacttcctaatgttctcacagctagcggaac 35998530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 2e-36; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 226 - 436
Target Start/End: Complemental strand, 26328895 - 26328685
Alignment:
Q  226 cccatcatggaagcaattgagttactacgtgtcgtcactatgactttactttcttctccaccaactttgatcaaatttaacaactcaatccattttgcac 325  Q
    |||||||| ||||||||  ||||||||||||| ||||||| || ||| |||||| || |||||||||| |||| || |  ||||||||||||||||| ||    
T  26328895 cccatcatcgaagcaatcaagttactacgtgttgtcactaagattttgctttctactgcaccaacttttatcagatctttcaactcaatccattttgaac 26328796  T
Q  326 ggtcatcattccatatatcatctaggacgaggataaacttttgaccagaaagtttatgtcttagacgaatttgtagttgctcaatatcaaaatggttaat 425  Q
    ||| ||||| |||||||||||||| |||||| | |||||||| ||| ||||| |||||||| |||||| |   || ||||||||||||||| || | |||    
T  26328795 ggttatcatcccatatatcatctaagacgagtacaaactttttacctgaaagcttatgtctaagacgactcactaattgctcaatatcaaagtgttcaat 26328696  T
Q  426 gtcttcttggt 436  Q
    || ||||||||    
T  26328695 gttttcttggt 26328685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 2e-36; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 154 - 436
Target Start/End: Original strand, 18117804 - 18118086
Alignment:
Q  154 aatgcccatttcacaaacaaatacaaatagctctcttgcgaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttactac 253  Q
    ||||||||||||||||||||| | ||| || | ||    ||||| ||||  |||| ||| || |||||| |||||||||| || ||||||||||| || |    
T  18117804 aatgcccatttcacaaacaaagataaacagttttcaatagaaaggccttttaaaacataggagggaacagtacccatcatcgatgcaattgagttgctgc 18117903  T
Q  254 gtgtcgtcactatgactttactttcttctccaccaactttgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctaggac 353  Q
    |||| ||| | |||||||| ||| || ||   |||||||| ||||||| |  |||||| ||||||||| |||  ||||||||||||||||||||||  ||    
T  18117904 gtgttgtcgccatgactttgcttcctactgtgccaactttaatcaaatctttcaactcgatccattttacacaatcatcattccatatatcatctaacac 18118003  T
Q  354 gaggataaacttttgaccagaaagtttatgtcttagacgaatttgtagttgctcaatatcaaaatggttaatgtcttcttggt 436  Q
     || | |||| ||| |||| |||||||| |||| |||||| ||||||| |||||||||||||||||||| |||| ||||||||    
T  18118004 aagtaaaaaccttttaccataaagtttacgtctcagacgactttgtagctgctcaatatcaaaatggtttatgttttcttggt 18118086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 529 - 742
Target Start/End: Original strand, 18125831 - 18126046
Alignment:
Q  529 acacatccaaatcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatg 628  Q
    ||||| ||| ||||||||||| || |  |||||||| |||||||||||||| || | | |||| | ||||||||||||||||||||||||||| || |||    
T  18125831 acacacccacatcttcaattgaaagagttcatctattctcttatcattgaaaacaagctttgccaatgtggtcttccccaagccaccaattcccaccatg 18125930  T
Q  629 ggaataacacaaat--ttttgtcaccatctccatctccatgaggatgcggttgcatcaaaagtttgataatttcttccctatcattctccctcccaataa 726  Q
    ||||||||| | |   |||| |||||||| ||||| ||||||||||| | |||||||||||| |||||||| |||||||||||| |||| || || || |    
T  18125931 ggaataacagatagacttttatcaccatcaccatcaccatgaggatgtgcttgcatcaaaagcttgataatctcttccctatcactctctcttcctatta 18126030  T
Q  727 cacttgaagcatcaac 742  Q
    ||||  ||||||||||    
T  18126031 cactcaaagcatcaac 18126046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 482 - 609
Target Start/End: Original strand, 18118138 - 18118267
Alignment:
Q  482 agttgataattttgataataatgcgcctaatatcaaaatcattggagacacatcc--aaatcttcaattggaaaatatcatctatcctcttatcattgaa 579  Q
    ||||||| ||||||||||| ||| || |||||| ||||| ||||||||||||  |  | ||||||||||| ||||  ||||| ||||||||||| |||||    
T  18118138 agttgattattttgataattatgtgcataatataaaaataattggagacacagactcacatcttcaattgaaaaaattcatcgatcctcttatcgttgaa 18118237  T
Q  580 caccaaccttgcaagtgtggtcttccccaa 609  Q
     |||||| ||||||||||||||||||||||    
T  18118238 taccaactttgcaagtgtggtcttccccaa 18118267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 193 - 370
Target Start/End: Original strand, 18125496 - 18125673
Alignment:
Q  193 gaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttactacgtgtcgtcactatgactttactttcttctccaccaactt 292  Q
    |||||||||| ||||| ||| || |||||| |||||||||| ||||||||||||||| ||||||| ||||| || | ||| ||| ||  |   |||||||    
T  18125496 gaaagaccttgcaaaacatatgagggaacattacccatcatcgaagcaattgagttattacgtgttgtcaccataattttgcttcctcttgtgccaactt 18125595  T
Q  293 tgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctaggacgaggataaacttttgac 370  Q
    | ||||||| |  |||||| ||||| |||||||| ||||||||||||| ||||||||  || || | |||||||||||    
T  18125596 ttatcaaatctttcaactcgatccactttgcacgatcatcattccatacatcatctaacacaagtaaaaacttttgac 18125673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 18125327 - 18125383
Alignment:
Q  23 atttaaatcaaattttgagaatagagaacttcctaatgttttgacagccagcggaac 79  Q
    |||||||||||||||||||||||| ||||||||||||||| | ||||| || |||||    
T  18125327 atttaaatcaaattttgagaatagggaacttcctaatgttctaacagctagtggaac 18125383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 801 - 930
Target Start/End: Original strand, 18126105 - 18126234
Alignment:
Q  801 gcaagtccaaaccttgtcccgtcagctgccaccttattcaatctatttctaatctctttgattttatgtgacatcctaaaacggaaagctggtggatttg 900  Q
    |||||||||||| | ||||| || | ||| ||||||| ||||||||  ||||| ||||| ||||  | || |||||||| ||| |||||  ||| ||| |    
T  18126105 gcaagtccaaacttagtcccatcggttgctaccttatccaatctatccctaatatctttaatttgttttgccatcctaagacgaaaagcaagtgaattgg 18126204  T
Q  901 aggaagaaaacaagtggcataccttcattc 930  Q
    ||||| | || ||||||| |||||||||||    
T  18126205 aggaacagaagaagtggcgtaccttcattc 18126234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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