View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4202_low_1 (Length: 756)

Name: NF4202_low_1
Description: NF4202
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4202_low_1
NF4202_low_1
[»] chr5 (48 HSPs)
chr5 (7-592)||(7835645-7836214)
chr5 (215-517)||(18695004-18695308)
chr5 (216-518)||(25556876-25557179)
chr5 (216-490)||(16900996-16901272)
chr5 (283-514)||(245599-245831)
chr5 (220-517)||(40428642-40428941)
chr5 (216-519)||(26639036-26639343)
chr5 (298-518)||(10379282-10379503)
chr5 (215-519)||(16307475-16307783)
chr5 (214-452)||(31055312-31055551)
chr5 (298-518)||(38408628-38408850)
chr5 (313-518)||(10293184-10293390)
chr5 (309-518)||(36641142-36641354)
chr5 (299-519)||(17704670-17704888)
chr5 (318-434)||(17825599-17825716)
chr5 (216-515)||(19169346-19169648)
chr5 (309-518)||(23765485-23765694)
chr5 (309-518)||(23815333-23815542)
chr5 (309-434)||(462851-462977)
chr5 (299-437)||(38476553-38476692)
chr5 (211-437)||(2373227-2373455)
chr5 (382-519)||(8645795-8645935)
chr5 (365-506)||(32465984-32466125)
chr5 (299-434)||(41663606-41663743)
chr5 (309-435)||(15885258-15885384)
chr5 (699-741)||(7835495-7835537)
chr5 (407-519)||(31648054-31648167)
chr5 (208-526)||(37961239-37961561)
chr5 (320-434)||(7187274-7187388)
chr5 (464-516)||(4800935-4800987)
chr5 (336-434)||(23040068-23040170)
chr5 (300-434)||(34125144-34125280)
chr5 (464-519)||(16900995-16901050)
chr5 (213-267)||(31648238-31648292)
chr5 (215-267)||(23765418-23765470)
chr5 (215-267)||(23815266-23815318)
chr5 (217-265)||(35302169-35302217)
chr5 (387-434)||(20653905-20653952)
chr5 (463-518)||(23765419-23765474)
chr5 (463-518)||(23815267-23815322)
chr5 (213-275)||(20654040-20654102)
chr5 (469-519)||(23039949-23039999)
chr5 (470-519)||(245851-245900)
chr5 (461-518)||(23040284-23040341)
chr5 (460-521)||(24025307-24025367)
chr5 (467-520)||(26639034-26639087)
chr5 (469-518)||(31648240-31648289)
chr5 (469-518)||(38408883-38408932)
[»] chr7 (74 HSPs)
chr7 (213-517)||(24597513-24597819)
chr7 (216-517)||(19195213-19195517)
chr7 (215-518)||(21224352-21224657)
chr7 (211-527)||(27869190-27869509)
chr7 (216-518)||(11843177-11843482)
chr7 (217-519)||(31493909-31494214)
chr7 (216-518)||(20636618-20636923)
chr7 (213-518)||(48175958-48176267)
chr7 (241-518)||(13577811-13578089)
chr7 (298-516)||(2331015-2331235)
chr7 (300-517)||(42271333-42271552)
chr7 (300-518)||(19919687-19919906)
chr7 (312-514)||(3562529-3562733)
chr7 (298-517)||(17305764-17305987)
chr7 (216-518)||(8526795-8527099)
chr7 (348-518)||(20638490-20638663)
chr7 (217-452)||(35337523-35337759)
chr7 (298-436)||(36746585-36746724)
chr7 (304-519)||(14624606-14624818)
chr7 (285-452)||(41452318-41452486)
chr7 (309-432)||(4193637-4193761)
chr7 (298-518)||(44077952-44078175)
chr7 (362-514)||(18754412-18754567)
chr7 (309-437)||(10023878-10024006)
chr7 (216-515)||(39181939-39182238)
chr7 (285-517)||(10655330-10655564)
chr7 (215-434)||(19493404-19493622)
chr7 (286-384)||(6650646-6650744)
chr7 (309-434)||(26385346-26385472)
chr7 (294-434)||(21264134-21264276)
chr7 (309-434)||(26126339-26126465)
chr7 (309-427)||(24448135-24448256)
chr7 (298-519)||(33237495-33237718)
chr7 (348-436)||(21225680-21225768)
chr7 (336-434)||(5111524-5111623)
chr7 (342-527)||(9157176-9157360)
chr7 (376-504)||(6798074-6798201)
chr7 (368-516)||(25002712-25002859)
chr7 (460-518)||(24448044-24448103)
chr7 (309-434)||(24464660-24464787)
chr7 (464-519)||(39182184-39182239)
chr7 (464-514)||(19493567-19493617)
chr7 (469-519)||(25002961-25003011)
chr7 (407-519)||(6650542-6650653)
chr7 (336-434)||(4571463-4571563)
chr7 (298-386)||(5087130-5087218)
chr7 (460-503)||(9157045-9157088)
chr7 (464-519)||(20636869-20636924)
chr7 (464-519)||(27869194-27869249)
chr7 (368-439)||(29051699-29051770)
chr7 (309-422)||(39440213-39440328)
chr7 (295-384)||(5348163-5348253)
chr7 (286-384)||(9822170-9822267)
chr7 (286-384)||(10724095-10724192)
chr7 (298-384)||(15681766-15681852)
chr7 (460-518)||(21810087-21810145)
chr7 (469-518)||(2331274-2331323)
chr7 (469-518)||(33237415-33237464)
chr7 (464-504)||(23373672-23373712)
chr7 (463-507)||(24448288-24448332)
chr7 (464-514)||(3403055-3403106)
chr7 (217-264)||(23080818-23080865)
chr7 (460-519)||(23658772-23658831)
chr7 (298-434)||(3403133-3403271)
chr7 (464-514)||(10023789-10023839)
chr7 (212-266)||(21225573-21225627)
chr7 (469-507)||(43517168-43517206)
chr7 (362-434)||(3769489-3769562)
chr7 (470-519)||(5111667-5111716)
chr7 (469-518)||(11843177-11843226)
chr7 (470-519)||(14624857-14624906)
chr7 (469-518)||(21225577-21225626)
chr7 (464-517)||(31494161-31494214)
chr7 (470-519)||(42271589-42271638)
[»] chr2 (35 HSPs)
chr2 (217-518)||(38716193-38716496)
chr2 (213-518)||(30714271-30714579)
chr2 (211-526)||(11175898-11176217)
chr2 (217-518)||(9051028-9051332)
chr2 (212-518)||(18537824-18538133)
chr2 (217-518)||(15735063-15735367)
chr2 (202-520)||(6763702-6764024)
chr2 (217-514)||(9787563-9787861)
chr2 (220-518)||(25298804-25299105)
chr2 (214-518)||(15700746-15701053)
chr2 (241-514)||(2986689-2986966)
chr2 (339-518)||(4587859-4588042)
chr2 (219-518)||(22191045-22191347)
chr2 (309-434)||(22387160-22387287)
chr2 (212-421)||(17368314-17368523)
chr2 (299-504)||(36464289-36464493)
chr2 (299-431)||(4104907-4105040)
chr2 (298-518)||(28365511-28365732)
chr2 (312-434)||(2190617-2190741)
chr2 (312-452)||(331779-331921)
chr2 (216-267)||(43301656-43301707)
chr2 (464-518)||(25884177-25884231)
chr2 (469-517)||(15735319-15735367)
chr2 (468-518)||(21773332-21773382)
chr2 (337-434)||(26829210-26829308)
chr2 (464-518)||(30714274-30714328)
chr2 (215-268)||(32677814-32677867)
chr2 (312-434)||(14743402-14743526)
chr2 (463-514)||(36464521-36464572)
chr2 (362-431)||(1020478-1020548)
chr2 (469-507)||(25298811-25298849)
chr2 (215-265)||(36464527-36464577)
chr2 (460-517)||(17368461-17368518)
chr2 (469-518)||(18537828-18537877)
chr2 (469-518)||(32677815-32677864)
[»] scaffold0025 (2 HSPs)
scaffold0025 (217-517)||(19285-19585)
scaffold0025 (216-519)||(61812-62123)
[»] chr3 (58 HSPs)
chr3 (214-517)||(13080894-13081201)
chr3 (215-518)||(25179577-25179881)
chr3 (215-518)||(26628023-26628330)
chr3 (283-519)||(48907359-48907597)
chr3 (300-524)||(8542603-8542830)
chr3 (216-517)||(3328812-3329117)
chr3 (217-517)||(8338940-8339244)
chr3 (215-517)||(22500594-22500898)
chr3 (217-518)||(27852753-27853056)
chr3 (309-518)||(30155238-30155448)
chr3 (285-519)||(10743407-10743642)
chr3 (283-514)||(4521957-4522191)
chr3 (215-514)||(22447738-22448045)
chr3 (293-519)||(3780881-3781105)
chr3 (215-513)||(25022662-25022960)
chr3 (217-435)||(28154882-28155102)
chr3 (336-518)||(26633479-26633660)
chr3 (298-452)||(23428701-23428856)
chr3 (214-436)||(28173726-28173950)
chr3 (285-517)||(46673116-46673350)
chr3 (213-393)||(32960641-32960819)
chr3 (213-437)||(34878525-34878751)
chr3 (220-393)||(6927597-6927770)
chr3 (309-518)||(40836271-40836483)
chr3 (339-517)||(48860704-48860883)
chr3 (216-519)||(20001709-20002012)
chr3 (309-506)||(33279678-33279877)
chr3 (309-434)||(26126999-26127125)
chr3 (407-519)||(3820915-3821025)
chr3 (304-519)||(22416331-22416550)
chr3 (285-434)||(26177025-26177175)
chr3 (285-494)||(33104965-33105176)
chr3 (298-493)||(23320391-23320582)
chr3 (283-518)||(36311151-36311388)
chr3 (217-384)||(3821018-3821186)
chr3 (464-527)||(26633351-26633413)
chr3 (460-530)||(33279573-33279644)
chr3 (362-434)||(9496363-9496436)
chr3 (375-494)||(49657939-49658057)
chr3 (469-518)||(1743505-1743554)
chr3 (309-377)||(43668571-43668639)
chr3 (469-516)||(40836181-40836228)
chr3 (463-517)||(4776068-4776122)
chr3 (464-517)||(8338940-8338993)
chr3 (298-434)||(35201077-35201213)
chr3 (460-507)||(23320606-23320654)
chr3 (213-265)||(40836434-40836486)
chr3 (464-515)||(4775852-4775903)
chr3 (464-519)||(20001959-20002013)
chr3 (213-353)||(46387579-46387718)
chr3 (217-275)||(3781124-3781182)
chr3 (464-518)||(22447739-22447793)
chr3 (464-518)||(26628024-26628078)
chr3 (464-518)||(34878528-34878582)
chr3 (470-519)||(1743253-1743302)
chr3 (214-267)||(26628279-26628332)
chr3 (464-517)||(28154882-28154935)
chr3 (470-515)||(32315174-32315219)
[»] chr8 (41 HSPs)
chr8 (216-519)||(5192271-5192577)
chr8 (214-519)||(4518866-4519173)
chr8 (211-517)||(8802394-8802703)
chr8 (213-519)||(44146970-44147278)
chr8 (217-514)||(38630058-38630359)
chr8 (215-452)||(19391386-19391624)
chr8 (298-519)||(17648241-17648465)
chr8 (283-517)||(30784332-30784568)
chr8 (309-517)||(19924265-19924476)
chr8 (309-513)||(12723354-12723561)
chr8 (215-518)||(4807598-4807906)
chr8 (285-517)||(33895375-33895608)
chr8 (216-517)||(21666273-21666577)
chr8 (218-517)||(32400325-32400624)
chr8 (299-518)||(22452256-22452478)
chr8 (380-518)||(21929967-21930106)
chr8 (298-434)||(18252968-18253105)
chr8 (298-393)||(23565216-23565311)
chr8 (296-436)||(3208063-3208204)
chr8 (214-518)||(18881501-18881806)
chr8 (313-434)||(7117211-7117334)
chr8 (309-433)||(31268365-31268490)
chr8 (464-518)||(19392817-19392871)
chr8 (212-341)||(21929842-21929972)
chr8 (387-504)||(1824621-1824737)
chr8 (387-504)||(1859066-1859182)
chr8 (460-514)||(2053152-2053206)
chr8 (304-434)||(4423118-4423250)
chr8 (309-518)||(15869431-15869638)
chr8 (362-517)||(3380199-3380356)
chr8 (468-516)||(32400325-32400373)
chr8 (309-434)||(41688203-41688330)
chr8 (217-275)||(3380199-3380257)
chr8 (469-507)||(15869347-15869385)
chr8 (464-518)||(23565340-23565394)
chr8 (464-504)||(38630306-38630346)
chr8 (464-519)||(5192270-5192325)
chr8 (460-514)||(2053434-2053488)
chr8 (470-515)||(3208236-3208281)
chr8 (214-263)||(4807859-4807908)
chr8 (469-518)||(33895629-33895678)
[»] chr1 (50 HSPs)
chr1 (216-518)||(4059521-4059827)
chr1 (217-519)||(3616797-3617102)
chr1 (216-518)||(24196260-24196566)
chr1 (218-517)||(43706655-43706957)
chr1 (309-518)||(24961952-24962164)
chr1 (283-519)||(19077992-19078229)
chr1 (283-519)||(19125882-19126119)
chr1 (218-517)||(48471864-48472165)
chr1 (215-517)||(46432214-46432520)
chr1 (213-518)||(51719119-51719425)
chr1 (309-509)||(24749805-24750009)
chr1 (298-518)||(28920738-28920956)
chr1 (213-517)||(2425225-2425531)
chr1 (213-433)||(27092849-27093070)
chr1 (309-518)||(29676078-29676290)
chr1 (309-517)||(22786031-22786238)
chr1 (294-435)||(29182078-29182220)
chr1 (304-518)||(2657601-2657816)
chr1 (298-452)||(16551725-16551881)
chr1 (310-518)||(18606777-18606988)
chr1 (309-434)||(47685186-47685312)
chr1 (299-434)||(4455125-4455262)
chr1 (470-518)||(16972107-16972155)
chr1 (464-516)||(50334719-50334771)
chr1 (309-434)||(21185290-21185414)
chr1 (460-517)||(6285453-6285510)
chr1 (309-434)||(26605370-26605494)
chr1 (463-519)||(24750019-24750075)
chr1 (470-517)||(2657513-2657560)
chr1 (217-384)||(9554201-9554369)
chr1 (464-519)||(14601743-14601798)
chr1 (460-519)||(19563270-19563328)
chr1 (464-519)||(24196512-24196567)
chr1 (329-404)||(31084725-31084800)
chr1 (315-384)||(16858466-16858536)
chr1 (216-266)||(31084615-31084665)
chr1 (368-517)||(10684794-10684946)
chr1 (470-514)||(4455045-4455089)
chr1 (464-516)||(16551645-16551697)
chr1 (309-434)||(2260471-2260598)
chr1 (214-265)||(2657767-2657818)
chr1 (464-519)||(4059520-4059575)
chr1 (464-519)||(21148198-21148253)
chr1 (407-437)||(21148060-21148090)
chr1 (469-507)||(28552315-28552353)
chr1 (469-519)||(31084614-31084664)
chr1 (464-518)||(51719122-51719176)
chr1 (469-526)||(2260369-2260426)
chr1 (220-265)||(26605528-26605573)
chr1 (214-267)||(28920905-28920958)
[»] scaffold0419 (2 HSPs)
scaffold0419 (217-517)||(2961-3264)
scaffold0419 (464-517)||(2961-3014)
[»] chr4 (57 HSPs)
chr4 (283-518)||(5304414-5304650)
chr4 (215-518)||(43793629-43793935)
chr4 (216-519)||(15058819-15059123)
chr4 (299-518)||(35475290-35475510)
chr4 (300-519)||(13397759-13397981)
chr4 (220-517)||(4357252-4357552)
chr4 (215-437)||(13826418-13826641)
chr4 (216-517)||(25011735-25012039)
chr4 (311-517)||(52838231-52838436)
chr4 (299-517)||(4433266-4433485)
chr4 (339-518)||(9195787-9195967)
chr4 (309-518)||(41877121-41877329)
chr4 (216-518)||(1588414-1588717)
chr4 (299-513)||(27018221-27018435)
chr4 (220-519)||(6788961-6789264)
chr4 (339-518)||(55780386-55780567)
chr4 (339-518)||(55844566-55844747)
chr4 (213-424)||(15795412-15795624)
chr4 (285-517)||(19232412-19232648)
chr4 (213-517)||(2931321-2931627)
chr4 (316-429)||(2715817-2715930)
chr4 (304-518)||(45633437-45633652)
chr4 (460-519)||(24626220-24626279)
chr4 (309-434)||(51291262-51291389)
chr4 (317-518)||(41034634-41034839)
chr4 (309-514)||(15734403-15734609)
chr4 (298-437)||(4098738-4098879)
chr4 (407-519)||(25618788-25618902)
chr4 (470-517)||(17138540-17138587)
chr4 (298-384)||(25618710-25618795)
chr4 (331-431)||(23362519-23362620)
chr4 (216-345)||(47869829-47869958)
chr4 (464-518)||(18259362-18259416)
chr4 (304-432)||(24626308-24626438)
chr4 (464-518)||(43793630-43793684)
chr4 (469-517)||(4098912-4098960)
chr4 (464-519)||(3927664-3927719)
chr4 (470-517)||(45633693-45633740)
chr4 (464-518)||(13826419-13826473)
chr4 (298-384)||(36729170-36729256)
chr4 (464-517)||(9397440-9397493)
chr4 (469-518)||(20919334-20919383)
chr4 (469-517)||(4099045-4099093)
chr4 (215-267)||(4433181-4433233)
chr4 (362-452)||(9397258-9397350)
chr4 (470-514)||(20079151-20079195)
chr4 (463-518)||(4433182-4433237)
chr4 (470-517)||(13394536-13394583)
chr4 (470-517)||(13397675-13397722)
chr4 (460-519)||(15058818-15058877)
chr4 (214-265)||(45633435-45633486)
chr4 (213-275)||(35475287-35475349)
chr4 (213-275)||(41877270-41877332)
chr4 (213-267)||(55780383-55780437)
chr4 (213-267)||(55844563-55844617)
chr4 (477-518)||(2931583-2931624)
chr4 (469-518)||(24626472-24626521)
[»] chr6 (40 HSPs)
chr6 (216-518)||(34833924-34834229)
chr6 (283-518)||(18791357-18791594)
chr6 (300-517)||(26710391-26710611)
chr6 (217-518)||(31210793-31211095)
chr6 (299-518)||(24051008-24051229)
chr6 (298-519)||(32451724-32451948)
chr6 (285-518)||(14572247-14572481)
chr6 (215-518)||(4597403-4597710)
chr6 (300-517)||(24603361-24603581)
chr6 (215-437)||(35102489-35102713)
chr6 (213-503)||(15298500-15298792)
chr6 (309-517)||(22269410-22269617)
chr6 (309-517)||(25819685-25819895)
chr6 (215-428)||(18749095-18749309)
chr6 (298-518)||(22968238-22968458)
chr6 (298-518)||(23819935-23820155)
chr6 (362-519)||(32682424-32682582)
chr6 (331-518)||(8412757-8412947)
chr6 (298-515)||(3118683-3118901)
chr6 (385-517)||(18749297-18749432)
chr6 (294-430)||(24615771-24615908)
chr6 (309-384)||(20863821-20863896)
chr6 (299-517)||(19282296-19282514)
chr6 (294-384)||(23124798-23124888)
chr6 (341-516)||(4013791-4013968)
chr6 (362-434)||(4370983-4371056)
chr6 (213-384)||(34528284-34528454)
chr6 (464-519)||(35102714-35102769)
chr6 (298-430)||(9241742-9241874)
chr6 (464-519)||(2059071-2059126)
chr6 (470-517)||(8415305-8415352)
chr6 (463-494)||(9241900-9241931)
chr6 (294-434)||(12427316-12427459)
chr6 (213-275)||(8412754-8412816)
chr6 (464-518)||(18749096-18749150)
chr6 (464-513)||(14572182-14572231)
chr6 (463-504)||(15298734-15298775)
chr6 (214-267)||(22968407-22968460)
chr6 (214-267)||(23819933-23819986)
chr6 (466-519)||(34834177-34834230)
[»] scaffold0179 (1 HSPs)
scaffold0179 (215-519)||(5648-5955)
[»] scaffold0607 (2 HSPs)
scaffold0607 (216-518)||(2047-2352)
scaffold0607 (464-520)||(2045-2101)
[»] scaffold0062 (2 HSPs)
scaffold0062 (214-518)||(49658-49965)
scaffold0062 (214-518)||(62197-62504)
[»] scaffold0087 (1 HSPs)
scaffold0087 (225-519)||(24972-25270)
[»] scaffold0001 (1 HSPs)
scaffold0001 (309-514)||(142040-142247)
[»] scaffold0406 (2 HSPs)
scaffold0406 (215-517)||(1997-2296)
scaffold0406 (469-518)||(2246-2295)
[»] scaffold0267 (1 HSPs)
scaffold0267 (297-515)||(3649-3866)
[»] scaffold0060 (2 HSPs)
scaffold0060 (216-518)||(66182-66478)
scaffold0060 (460-520)||(66420-66480)
[»] scaffold0291 (2 HSPs)
scaffold0291 (298-434)||(10006-10143)
scaffold0291 (469-518)||(10179-10228)
[»] scaffold1875 (1 HSPs)
scaffold1875 (215-519)||(754-1061)
[»] scaffold1202 (1 HSPs)
scaffold1202 (348-514)||(1906-2074)
[»] scaffold0150 (1 HSPs)
scaffold0150 (213-437)||(5913-6138)
[»] scaffold0007 (2 HSPs)
scaffold0007 (309-393)||(250611-250695)
scaffold0007 (464-517)||(250518-250571)
[»] scaffold0002 (1 HSPs)
scaffold0002 (298-434)||(455111-455249)
[»] scaffold0174 (1 HSPs)
scaffold0174 (285-519)||(29717-29951)
[»] scaffold0014 (1 HSPs)
scaffold0014 (309-431)||(112214-112338)
[»] scaffold0064 (1 HSPs)
scaffold0064 (313-384)||(54506-54576)
[»] scaffold0683 (2 HSPs)
scaffold0683 (214-354)||(5117-5259)
scaffold0683 (406-518)||(5289-5402)
[»] scaffold0024 (1 HSPs)
scaffold0024 (220-434)||(43827-44043)


Alignment Details
Target: chr5 (Bit Score: 443; Significance: 0; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 443; E-Value: 0
Query Start/End: Original strand, 7 - 592
Target Start/End: Complemental strand, 7836214 - 7835645
Alignment:
Q  7 gtagcatagggatgatggttgtatttgcactgagaatgagaatgactgaatgagtggtgaatttgtcttgcagaacaaccgacaaggtcttgttggtcct 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||    
T  7836214 gtagcatagggatgatggttgtatttgcactgagaatgagaatgactg--------gtgaatttgtcttgcagaacaaccgacaaggtcttgttggtcct 7836123  T
Q  107 cttctgcagcaccctggtccaggtttaaattattattgtccttcacaatctatgtctacaatacctcatgaaatccattgaggtttattaaattagttta 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7836122 cttctgcagcaccctggtccaggtttaaattattattgtccttcacaatctatgtctacaatacctcatgaaatccattgaggtttattaaattagttta 7836023  T
Q  207 tttgaatttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcc 306  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||       ||||||||||||||||||||||||    
T  7836022 tttgaatttaggctaaactgcacttttcgcctcttatgttttaaaatattgcgattttggcttcctattaaaaaaatggcaattctagcctctttcatcc 7835923  T
Q  307 cgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttata 406  Q
    | || ||| |||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||     
T  7835922 caaagttgttgagaagacgccacatgtctaaaaaaaagggccataatcccacctctttgtaaagataaggggtcaaaaaacatattttccttatgttatg 7835823  T
Q  407 ggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaataggggtcaaaatcgcaacattttaaaacttagagggcgaaaagt 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||        |||||||| ||||||| ||||||||||||||||||||||||||||||    
T  7835822 ggtcaaaagagcatatttccctaaacataggatgccacttttgcc--------aataggggccaaaatcacaacattttaaaacttagagggcgaaaagt 7835731  T
Q  507 ggagtttagccttgaatttatccactgtcataaattttgtgtgattggttgggagaatttataagaatttataaaattagcttata 592  Q
    | ||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7835730 gaagtttagtcttgaatttttctactgtcataaattttgtgtgattggttgggagaatttataagaatttataaaattagcttata 7835645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 215 - 517
Target Start/End: Complemental strand, 18695308 - 18695004
Alignment:
Q  215 taggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattg 314  Q
    ||||||||| |||| |||||||| | |||||||||||||||||||||||||||  ||||||       |||||||| | ||| |||||||| | ||||||    
T  18695308 taggctaaagtgcacttttcgccccctatgtttcaaaatattgcgattttggccccctattaaaaaaatggcaattttggcccctttcatctcaaaattg 18695209  T
Q  315 ctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaa 413  Q
    ||||||||||||| | |||| ||||||||||||||||||| || || |||||||||||||||||||||||| |||||||  |||||||||  ||||||||    
T  18695208 ctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaa 18695109  T
Q  414 agagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagt 511  Q
    ||||||||||||||||||||||||  | |||||||||||        |||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  18695108 agagcatatttccctaaacatagg-ggtcacttttgccattttttttaatagggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtgaagt 18695010  T
Q  512 ttagcc 517  Q
    ||||||    
T  18695009 ttagcc 18695004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 216 - 518
Target Start/End: Original strand, 25556876 - 25557179
Alignment:
Q  216 aggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattgc 315  Q
    ||||||||||||| || ||||| || |||||||||||| |||| ||||||||  ||||||       |||||||| | ||| |||||||||| |||||||    
T  25556876 aggctaaactgcacttatcgcccct-atgtttcaaaatgttgcaattttggccccctattaaaaaattggcaattttggcccctttcatcccaaaattgc 25556974  T
Q  316 tgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaa 414  Q
    |||||||||||| | |||| ||||||||||||||||||  || || ||||||||||||||||||||||||||||||||  |||||||||   ||||||||    
T  25556975 tgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaa 25557074  T
Q  415 gagcatatttccctaaacataggatgccacttttgccannnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagttt 513  Q
    |||||||||||||||||||||||  | |||||||||||       |||| |||||||||||||||||||||| |||||||| ||||||||||| ||||||    
T  25557075 gagcatatttccctaaacatagggggtcacttttgccatttttttaatagggggtcaaaatcgcaacattttgaaacttagggggcgaaaagtagagttt 25557174  T
Q  514 agcct 518  Q
    |||||    
T  25557175 agcct 25557179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 216 - 490
Target Start/End: Original strand, 16900996 - 16901272
Alignment:
Q  216 aggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaattg 314  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||||||||| |  ||||||        |||||||| | |||  ||||||||| ||||||    
T  16900996 aggctaaactgcacttttcgcctcctatgtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaattttggcccatttcatcccaaaattg 16901095  T
Q  315 ctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaa 413  Q
    ||||||||||||| | |||| ||||||||||||||||||| || || ||||||||||||||||||||||||||||||||  |||||||||  ||||||||    
T  16901096 ctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaaa 16901195  T
Q  414 agagcatatttccctaaacataggatgccacttttgccannnnnnnaata-ggggtcaaaatcgcaacattttaaaac 490  Q
    ||||||||||||||||||||||||  | |||||||||||       |||| |||||||||||||||||||||| ||||    
T  16901196 agagcatatttccctaaacatagg-ggtcacttttgccatttttttaatagggggtcaaaatcgcaacattttgaaac 16901272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 283 - 514
Target Start/End: Complemental strand, 245831 - 245599
Alignment:
Q  283 tggcaattctagcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaa 382  Q
    |||||||| | ||| | |||||||  ||||||||||||||||||| | |||| ||||||||||||||||||| || || |||||||||||||||||||||    
T  245831 tggcaattttggcccccttcatccgaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaa 245732  T
Q  383 aaaacatatttttcttatgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaata-ggggtcaaaatcgcaac 480  Q
    ||| |||||||  |||||||||  ||||||||||||||||||||||||||||||||  | |||||||||||       |||| |||| |||||| ||||     
T  245731 aaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagg-ggtcacttttgccatttttttaatagggggccaaaattgcaat 245633  T
Q  481 attttaaaacttagagggcgaaaagtggagttta 514  Q
    ||||| ||||||||||||||||||||| ||||||    
T  245632 attttgaaacttagagggcgaaaagtgaagttta 245599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 220 - 517
Target Start/End: Original strand, 40428642 - 40428941
Alignment:
Q  220 taaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaattgctga 318  Q
    |||| |||| |||||||| | ||||||||||||| ||||||||||||   ||||||        |||||||| | ||| | ||| |||| ||||||||||    
T  40428642 taaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggtcccctattaaaaaaaatggcaattttggcccccttcgtcccaaaattgctga 40428741  T
Q  319 gaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaagag 417  Q
    ||||||||| | |||| ||||||||||| ||||||| ||  | |||||||||||||||||||||||| |||||||  |||||||||  |||||||||||     
T  40428742 gaagacgccacgtgtcccaaaaaaggggtcataatcgcaattttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagaa 40428841  T
Q  418 catatttccctaaacataggatgccacttttgcca-nnnnnnnaataggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagc 516  Q
    |||||||||||||||| |||  |  ||||||||||        |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  40428842 catatttccctaaacacagg-ggtgacttttgccatattttttaataggggtcaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagc 40428940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 216 - 519
Target Start/End: Original strand, 26639036 - 26639343
Alignment:
Q  216 aggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaattg 314  Q
    |||||||| |||| |||||||| | ||||||||||||| ||| ||||||| || ||||||        |||||||| | ||| | |||||||| ||||||    
T  26639036 aggctaaagtgcacttttcgccccctatgtttcaaaatgttgtgattttgactccctattaaaaaaaatggcaattttggcccccttcatcccaaaattg 26639135  T
Q  315 ctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaa 413  Q
     |||||||||||| | |||| |||||||| |||||||||  || || |||||||||||||||||||||||  |||||||  |||||||||  ||||||||    
T  26639136 ttgagaagacgccacgtgtcccaaaaaagaggccataattgcaactttttgtaaagataaggggtcaaaacgcatatttcccttatgttaggaggtcaaa 26639235  T
Q  414 agagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaatagggg-tcaaaatcgcaacattttaaaacttagagggcgaaaagtggagt 511  Q
    |||||||||||||||||||||| |  | |||||||||||        || |||||  ||||||||||||||||| ||||||||||| ||||||||| |||    
T  26639236 agagcatatttccctaaacatatggggtcacttttgccattttttttaacaggggaccaaaatcgcaacattttgaaacttagaggacgaaaagtgaagt 26639335  T
Q  512 ttagcctt 519  Q
    ||||||||    
T  26639336 ttagcctt 26639343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 298 - 518
Target Start/End: Complemental strand, 10379503 - 10379282
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttct 397  Q
    |||||||||| ||||| || |||||| ||| | ||||||| |||||||| ||||||| || || ||||||||||||||||||||||||||||||||  ||    
T  10379503 ctttcatcccaaaatttctcagaagatgccacttgtctcagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttccct 10379404  T
Q  398 tatgttataggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaat-aggggtcaaaatcgcaacattttaaaacttagag 496  Q
    |||||||  |||||||||||||||||| ||||||||||||| | ||||||||| |       ||| ||||| |||||| | ||||||||||||||||| |    
T  10379403 tatgttaggggtcaaaagagcatattttcctaaacataggaggtcacttttgctatttttttaataaggggccaaaattgtaacattttaaaacttaggg 10379304  T
Q  497 ggcgaaaagtggagtttagcct 518  Q
    | |||||| ||| |||||||||    
T  10379303 gacgaaaaatggggtttagcct 10379282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 215 - 519
Target Start/End: Original strand, 16307475 - 16307783
Alignment:
Q  215 taggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattg 314  Q
    |||| ||||||||| ||||| || | ||||||| ||||| ||| ||||||||   ||||||       |||||||| | ||| ||||||||   ||||||    
T  16307475 taggttaaactgcacttttcaccccctatgttttaaaatgttgtgattttggtcccctattaaaaaaatggcaattttggcccctttcatcttaaaattg 16307574  T
Q  315 ctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta--taggtcaa 412  Q
    ||||||||||||| ||||||  |||||||||| ||||||  || || ||||||||||||||| ||||||||||||||||| |||||||||    ||||||    
T  16307575 ctgagaagacgccacatgtccaaaaaaaggggtcataattgcaactttttgtaaagataaggagtcaaaaaacatattttccttatgttaggggggtcaa 16307674  T
Q  413 aagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaataggg-gtcaaaatcgcaacattttaaaacttagagggcgaaaagtggag 510  Q
    |||||||||||||||||||||||||  | ||||||||| |        ||||||| |  |||||||||||||||||||||||| |||||||||||||||     
T  16307675 aagagcatatttccctaaacatagggggtcacttttgcaattttttttaatagggagctaaaatcgcaacattttaaaacttaaagggcgaaaagtggac 16307774  T
Q  511 tttagcctt 519  Q
     ||||||||    
T  16307775 cttagcctt 16307783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 214 - 452
Target Start/End: Original strand, 31055312 - 31055551
Alignment:
Q  214 ttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaatt 313  Q
    ||||||||||||||| |||||||| | ||||||||| ||| |||| ||||||||  ||||||       | |||||| | ||| |||||||||| |||||    
T  31055312 ttaggctaaactgcacttttcgccccctatgtttcataatgttgcaattttggccccctattaaaaaaatagcaattttggcccctttcatcccaaaatt 31055411  T
Q  314 gctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtt-ataggtcaa 412  Q
    ||| |||||| ||| | |||| || |||||||| ||||||| ||  | ||||||||||||||||||||||||||||||||  |||||||| |  ||||||    
T  31055412 gctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaattttttgtaaagataaggggtcaaaaaacatatttcccttatgttaaggggtcaa 31055511  T
Q  413 aagagcatatttccctaaacataggatgccacttttgcca 452  Q
    |||||||||||||||||||||||||  | |||||||||||    
T  31055512 aagagcatatttccctaaacatagggggtcacttttgcca 31055551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 298 - 518
Target Start/End: Complemental strand, 38408850 - 38408628
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttct 397  Q
    |||||||||| |||||||| |||||| ||| | |||| || |||| ||| ||||||  || || ||||||||||||||||||||||||||||||||  ||    
T  38408850 ctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaatgggtcataatagcaactttttgtaaagataaggggtcaaaaaacatatttccct 38408751  T
Q  398 tatgttataggtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttaga 495  Q
    |||||||  ||||||||||||||||||| |||||||||||  | |||||||||||        |||| |||| ||||||||||| ||||| ||||||||     
T  38408750 tatgttagtggtcaaaagagcatatttctctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaatattttgaaacttagg 38408651  T
Q  496 gggcgaaaagtggagtttagcct 518  Q
    || ||||||||||||||||||||    
T  38408650 ggacgaaaagtggagtttagcct 38408628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 313 - 518
Target Start/End: Original strand, 10293184 - 10293390
Alignment:
Q  313 tgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtca 411  Q
    ||||||||||||||| ||||||| ||||||| || ||||||| || || |||| |||||||||| ||||||||||||||||  |||||||||  ||||||    
T  10293184 tgctgagaagacgccacatgtcttaaaaaagaggtcataatcgcaactttttggaaagataaggagtcaaaaaacatatttcccttatgttaggaggtca 10293283  T
Q  412 aaagagcatatttccctaaacataggatgccacttttgccannnnnnnaatag-gggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggag 510  Q
    |||||||||||||||| |||||||||  | || ||||||||       ||||| ||||||||||| ||||||||| |||||||| || ||||||||| |     
T  10293284 aaagagcatatttcccaaaacatagggggtcatttttgcca-ttttttaatagcgggtcaaaatcacaacattttgaaacttagtggacgaaaagtgcaa 10293382  T
Q  511 tttagcct 518  Q
    ||||||||    
T  10293383 tttagcct 10293390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 309 - 518
Target Start/End: Complemental strand, 36641354 - 36641142
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-tag 407  Q
    |||||||||||||||||||   |||| ||||||||||  ||||||| || || ||| ||||||||| |||||||||| |||||||  |||||||||  ||    
T  36641354 aaattgctgagaagacgccatgtgtcccaaaaaagggatcataatcgcaactttttataaagataacgggtcaaaaagcatatttcccttatgttaggag 36641255  T
Q  408 gtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaatagggg-tcaaaatcgcaacattttaaaacttagagggcgaaaag 505  Q
    |||||||||||||||||| |||||||||||    |||||||||||        ||||||||  ||||||| ||| ||||| ||||||||| |||||||||    
T  36641254 gtcaaaagagcatatttctctaaacataggggctcacttttgccattttttttaataggggaccaaaatcacaatattttgaaacttagaaggcgaaaag 36641155  T
Q  506 tggagtttagcct 518  Q
    || ||||||||||    
T  36641154 tgaagtttagcct 36641142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 299 - 519
Target Start/End: Original strand, 17704670 - 17704888
Alignment:
Q  299 tttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttctt 398  Q
    |||| |||| ||||||||||||| | ||| | | || ||||||||||||||||||  || || ||||||||||||| ||||||||||  ||||||  |||    
T  17704670 tttcgtcccaaaattgctgagaacatgccacttatcccaaaaaaggggccataatttcaactttttgtaaagataaagggtcaaaaagtatatttccctt 17704769  T
Q  399 atgttataggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagg 497  Q
    ||||||| |||||||||||||||||| ||||||||| || |   |||||||| |       |||| |||| ||||||||||| ||||| |||||||| ||    
T  17704770 atgttatgggtcaaaagagcatattttcctaaacatgggtt---acttttgctatttttttaatagggggccaaaatcgcaatattttgaaacttagggg 17704866  T
Q  498 gcgaaaagtggagtttagcctt 519  Q
     ||||||||| ||||| |||||    
T  17704867 acgaaaagtgtagtttggcctt 17704888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 318 - 434
Target Start/End: Original strand, 17825599 - 17825716
Alignment:
Q  318 agaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttttcttatgttataggtcaaaaga 416  Q
    |||||||||| | |||| ||||||||||||||||||| || || ||||  ||||||| ||||||||| ||||||||| ||||||||||  ||||||||||    
T  17825599 agaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgacaagataaagggtcaaaagaacatatttctcttatgttaggggtcaaaaga 17825698  T
Q  417 gcatatttccctaaacat 434  Q
    ||||||||||||||||||    
T  17825699 gcatatttccctaaacat 17825716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 216 - 515
Target Start/End: Complemental strand, 19169648 - 19169346
Alignment:
Q  216 aggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaattg 314  Q
    |||||||| |||| |||||| | | ||| ||||||||| ||| ||||||||| |||||||        |||||||| | ||| | || ||||  ||||||    
T  19169648 aggctaaagtgcacttttcgtcccctatatttcaaaatgttgtgattttggcctcctattaaaaaaaatggcaattttggcccccttgatcctaaaattg 19169549  T
Q  315 ctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtt-ataggtcaaa 413  Q
    ||||||||||||| | |||   |||||| ||||||||||  || || |||||||||||||||||||||||| |||||||  |||||||| | ||||||||    
T  19169548 ctgagaagacgccacgtgttcaaaaaaatgggccataattgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaagaggtcaaa 19169449  T
Q  414 agagcatatttccctaaacataggatgccacttttgccannnnnnnaatag-gggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtt 512  Q
     |||||||||| ||||||||||||    |||||||||||       ||||| |   |||||| | |||||||||||||||||| | ||||||||| ||||    
T  19169448 tgagcatattttcctaaacataggggatcacttttgccatttttttaatagagaaccaaaattgtaacattttaaaacttagaagacgaaaagtgaagtt 19169349  T
Q  513 tag 515  Q
    |||    
T  19169348 tag 19169346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 309 - 518
Target Start/End: Original strand, 23765485 - 23765694
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttat-ag 407  Q
    ||||| ||||||||||||| | ||||  |||||||   |||||||| || || |||||||||||||  | ||||||| |||||||  |||||||||  ||    
T  23765485 aaatttctgagaagacgccacgtgtccaaaaaaaga--ccataatcgcaactttttgtaaagataaatgatcaaaaagcatatttcccttatgttaggag 23765582  T
Q  408 gtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaag 505  Q
    ||||||||||||||||||||||||||||||  | |||||||  ||        |||| |||| |||||| ||||||||||||||||||||||||||||||    
T  23765583 gtcaaaagagcatatttccctaaacatagg-ggtcacttttatcattttttttaatagggggccaaaattgcaacattttaaaacttagagggcgaaaag 23765681  T
Q  506 tggagtttagcct 518  Q
    || ||||||||||    
T  23765682 tgaagtttagcct 23765694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 309 - 518
Target Start/End: Original strand, 23815333 - 23815542
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttat-ag 407  Q
    ||||| ||||||||||||| | ||||  |||||||   |||||||| || || |||||||||||||  | ||||||| |||||||  |||||||||  ||    
T  23815333 aaatttctgagaagacgccacgtgtccaaaaaaaga--ccataatcgcaactttttgtaaagataaatgatcaaaaagcatatttcccttatgttaggag 23815430  T
Q  408 gtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaag 505  Q
    ||||||||||||||||||||||||||||||  | |||||||  ||        |||| |||| |||||| ||||||||||||||||||||||||||||||    
T  23815431 gtcaaaagagcatatttccctaaacatagg-ggtcacttttatcattttttttaatagggggccaaaattgcaacattttaaaacttagagggcgaaaag 23815529  T
Q  506 tggagtttagcct 518  Q
    || ||||||||||    
T  23815530 tgaagtttagcct 23815542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 309 - 434
Target Start/End: Complemental strand, 462977 - 462851
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttttcttatgttatag 407  Q
    |||||| ||| |||||||| | ||||| |||||   || ||||||| || || ||||||||||||||||||||||| ||||||||| |||||| ||||||    
T  462977 aaattgttgaaaagacgccacgtgtctaaaaaagaaggtcataatcgcaactttttgtaaagataaggggtcaaaagaacatatttctcttatattatag 462878  T
Q  408 gtcaaaagagcatatttccctaaacat 434  Q
    |||||||  ||||||||||||||||||    
T  462877 gtcaaaaaggcatatttccctaaacat 462851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 299 - 437
Target Start/End: Original strand, 38476553 - 38476692
Alignment:
Q  299 tttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttttct 397  Q
    |||| |||| ||||||||||||||||||| | |||| ||||||| ||| ||||||| || || ||||  ||||||||||||||||| | |||||||  ||    
T  38476553 tttcgtcccaaaattgctgagaagacgccacgtgtcccaaaaaa-gggtcataatcgcaactttttgagaagataaggggtcaaaagatcatatttccct 38476651  T
Q  398 tatgttat-aggtcaaaagagcatatttccctaaacatagg 437  Q
    ||||||||  ||||||||||||||||||||||||| |||||    
T  38476652 tatgttatggggtcaaaagagcatatttccctaaatatagg 38476692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 211 - 437
Target Start/End: Complemental strand, 2373455 - 2373227
Alignment:
Q  211 aatttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntgg-caattctagcctctttcatcccga 309  Q
    |||||||||||||||||| |||||  | | || |||||||||  ||||||||||||| |||||||        || ||||| | ||| || || |||| |    
T  2373455 aatttaggctaaactgcacttttcaacccctaagtttcaaaaagttgcgattttggcctcctatttaaaaaaaggacaattttggcccctgtcgtcccaa 2373356  T
Q  310 aattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttcttatgttatagg 408  Q
    ||||||| |||||||||| | |||| | ||||||||| ||||||| ||  | ||||  || ||||||||||| || | |||||||  |||||||||| ||    
T  2373355 aattgctaagaagacgccacgtgtccccaaaaaggggtcataatcgcaaatttttgagaaaataaggggtcataatatcatatttcccttatgttatggg 2373256  T
Q  409 tcaaaagagcatatttccctaaacatagg 437  Q
    |||||||||||||||| | ||||||||||    
T  2373255 tcaaaagagcatattttcttaaacatagg 2373227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 382 - 519
Target Start/End: Complemental strand, 8645935 - 8645795
Alignment:
Q  382 aaaaacatatttttcttatgttat-aggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnn-aatagggg-tcaaaatcgca 478  Q
    |||| |||||||  |||||||||  ||||||||||||||||||||||||||||| ||  | || ||||||||        |||||||| |||||||||||    
T  8645935 aaaatcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacattgggggtcaattttgccattttttttaatagggggtcaaaatcgca 8645836  T
Q  479 acattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    ||||||| ||||| ||||||||||||||| |||||||||||    
T  8645835 acattttgaaactaagagggcgaaaagtgaagtttagcctt 8645795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 365 - 506
Target Start/End: Original strand, 32465984 - 32466125
Alignment:
Q  365 gtaaagataaggggtcaaaaaacatatttttcttatgttataggtcaaaagagcatatttccctaaacat-aggatgccacttttgccannnnnnnaata 463  Q
    ||||||||||||||||||||||| || || |||||| |||  |||||||||||||||||| ||||||||| || ||  || ||||||||       ||||    
T  32465984 gtaaagataaggggtcaaaaaacttaattatcttatattaggggtcaaaagagcatattttcctaaacatgagaat--catttttgccacttttttaata 32466081  T
Q  464 gggg-tcaaaatcgcaacattttaaaacttagagggcgaaaagt 506  Q
    |||| |||||||||||||||||| |||||||| || ||||||||    
T  32466082 ggggatcaaaatcgcaacattttgaaacttaggggacgaaaagt 32466125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 299 - 434
Target Start/End: Original strand, 41663606 - 41663743
Alignment:
Q  299 tttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttct 397  Q
    |||| |||| |||||||| |||||| ||| | |||| ||||||||||||||||||| ||  | ||||  || |||| | ||||||||| |||||||  ||    
T  41663606 tttcgtcccaaaattgctaagaagatgccacgtgtcccaaaaaaggggccataatcgcaattttttgagaaaataaagagtcaaaaaatcatatttccct 41663705  T
Q  398 tatgttat-aggtcaaaagagcatatttccctaaacat 434  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  41663706 tatgttatggggtcaaaagagcatatttccctaaacat 41663743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 309 - 435
Target Start/End: Original strand, 15885258 - 15885384
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtt-atag 407  Q
    ||||||||||||| || || |||||| |||||||  | ||||||||  | || ||||||||||||| ||||||| ||||||||||  |||||||| | ||    
T  15885258 aaattgctgagaaaacaccacatgtcccaaaaaaatgaccataatcgaaactttttgtaaagataa-gggtcaacaaacatatttcccttatgttaagag 15885356  T
Q  408 gtcaaaagagcatatttccctaaacata 435  Q
    |||||||||| |||||||| ||||||||    
T  15885357 gtcaaaagagaatatttccataaacata 15885384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 699 - 741
Target Start/End: Complemental strand, 7835537 - 7835495
Alignment:
Q  699 gataagtgtttgtgcagttattatggtaagtgtttgtgttata 741  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  7835537 gataagtgtttgtgcagttattatggtaagtgtttgtgttata 7835495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 407 - 519
Target Start/End: Complemental strand, 31648167 - 31648054
Alignment:
Q  407 ggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaataggggtc-aaaatcgcaacattttaaaacttagagggcgaaaag 505  Q
    |||||||| |||||||||||||||||||| |  | |||||||||||       |||||||| | |||||||||||||||| ||| |||  || |||||||    
T  31648167 ggtcaaaaaagcatatttccctaaacataaggggtcacttttgccatttttttaatagggggcgaaaatcgcaacattttgaaatttatgggacgaaaag 31648068  T
Q  506 tggagtttagcctt 519  Q
    ||||||||||||||    
T  31648067 tggagtttagcctt 31648054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 208 - 526
Target Start/End: Original strand, 37961239 - 37961561
Alignment:
Q  208 ttgaatttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctatt-nnnnnnntggcaattctagcctctttcatcc 306  Q
    |||| |||||||||||| ||| ||||| |||| || |||||||||||||||||||||| |  ||||||        |  ||||  | | | |||||||||    
T  37961239 ttgattttaggctaaaccgcacttttcacctcctaagtttcaaaatattgcgattttgaccccctattaaaaaaaattacaatcttggtccctttcatcc 37961338  T
Q  307 cgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttttcttatgtta- 404  Q
    | |||||||||||||||| || | |||| |  |||||||||||||||  || || ||||  ||| ||||||||||||| | ||| |||  |||||||||     
T  37961339 caaaattgctgagaagacaccacgtgtcccttaaaaggggccataattgcaactttttgagaagttaaggggtcaaaagatcatttttcccttatgttag 37961438  T
Q  405 taggtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaataggggtcaaaatcgcaacattttaaaacttagagggcgaaa 503  Q
      |||||||||||| ||||||||||||||| ||    ||||||||| |        |||||| | |||||| |||||||||| |||||||| ||| ||||    
T  37961439 gcggtcaaaagagcgtatttccctaaacatgggggatcacttttgctattttttttaataggagccaaaattgcaacattttgaaacttagggggtgaaa 37961538  T
Q  504 agtggagtttagccttgaattta 526  Q
    |||| |||||| |||||| ||||    
T  37961539 agtgcagtttaaccttgatttta 37961561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 320 - 434
Target Start/End: Complemental strand, 7187388 - 7187274
Alignment:
Q  320 aagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttata-ggtcaaaagagc 418  Q
    |||||||| |||||| |||||||||| | |||||| || || |||||||| ||||  ||||| |||||||||||  ||||||||| | ||||||||||      
T  7187388 aagacgccacatgtcccaaaaaagggtc-ataatcgcaactttttgtaaaaataattggtcataaaacatatttcccttatgttagagggtcaaaagaat 7187290  T
Q  419 atatttccctaaacat 434  Q
    ||||||||||||||||    
T  7187289 atatttccctaaacat 7187274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 464 - 516
Target Start/End: Complemental strand, 4800987 - 4800935
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagc 516  Q
    ||||| ||||||||||||||||||||||||| ||||||||| || ||||||||    
T  4800987 ggggttaaaatcgcaacattttaaaacttagggggcgaaaaatgcagtttagc 4800935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 336 - 434
Target Start/End: Original strand, 23040068 - 23040170
Alignment:
Q  336 caaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttcttatgttat---aggtcaaaagagcatatttccctaaa 431  Q
    ||||||| ||| ||||||| || || ||||  ||||||||||||||||| | |||||||  |||||||||    ||||||||||||||||||||||||||    
T  23040068 caaaaaaagggtcataatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttaggggaggtcaaaagagcatatttccctaaa 23040167  T
Q  432 cat 434  Q
    |||    
T  23040168 cat 23040170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 300 - 434
Target Start/End: Complemental strand, 34125280 - 34125144
Alignment:
Q  300 ttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttctt 398  Q
    |||||||| ||||| ||||||| ||||| | |||  ||||| | ||| ||||||| || || ||||  |||||||| |||||||  | |||||||| |||    
T  34125280 ttcatcccaaaattactgagaatacgccacgtgttccaaaacatgggtcataatcgcaactttttgagaagataagaggtcaaatgatcatattttcctt 34125181  T
Q  399 atgttatagg-tcaaaagagcatatttccctaaacat 434  Q
    ||||||  || ||||||||||||||||||||||||||    
T  34125180 atgttaggggatcaaaagagcatatttccctaaacat 34125144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 464 - 519
Target Start/End: Complemental strand, 16901050 - 16900995
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    |||||||||||||||||||||| |||| |||  ||||||||||| |||||||||||    
T  16901050 ggggtcaaaatcgcaacattttgaaacataggaggcgaaaagtgcagtttagcctt 16900995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 31648292 - 31648238
Alignment:
Q  213 tttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggc 267  Q
    |||||||||||||||| |||||| | | ||||||||||||| |||||||||||||    
T  31648292 tttaggctaaactgcacttttcgtcccctatgtttcaaaatgttgcgattttggc 31648238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 215 - 267
Target Start/End: Original strand, 23765418 - 23765470
Alignment:
Q  215 taggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggc 267  Q
    |||||||||||||| |||||||| | ||||||||||||| |||| ||||||||    
T  23765418 taggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggc 23765470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 215 - 267
Target Start/End: Original strand, 23815266 - 23815318
Alignment:
Q  215 taggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggc 267  Q
    |||||||||||||| |||||||| | ||||||||||||| |||| ||||||||    
T  23815266 taggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggc 23815318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 35302217 - 35302169
Alignment:
Q  217 ggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttg 265  Q
    |||||||||||||||||| || |||| |||||||||| |||||||||||    
T  35302217 ggctaaactgcatttttctccccttaagtttcaaaatgttgcgattttg 35302169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 387 - 434
Target Start/End: Complemental strand, 20653952 - 20653905
Alignment:
Q  387 catatttttcttatgttataggtcaaaagagcatatttccctaaacat 434  Q
    |||||||  |||||||||  ||||||||||||||||||||||||||||    
T  20653952 catatttcacttatgttaggggtcaaaagagcatatttccctaaacat 20653905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 463 - 518
Target Start/End: Complemental strand, 23765474 - 23765419
Alignment:
Q  463 aggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    ||||| |||||| |||||||||| |||| ||| |||||||||||| ||||||||||    
T  23765474 aggggccaaaattgcaacattttgaaacatagggggcgaaaagtgcagtttagcct 23765419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 463 - 518
Target Start/End: Complemental strand, 23815322 - 23815267
Alignment:
Q  463 aggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    ||||| |||||| |||||||||| |||| ||| |||||||||||| ||||||||||    
T  23815322 aggggccaaaattgcaacattttgaaacatagggggcgaaaagtgcagtttagcct 23815267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 213 - 275
Target Start/End: Complemental strand, 20654102 - 20654040
Alignment:
Q  213 tttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctatt 275  Q
    |||||||||||||||| |||||| | | || |||||||||| ||| ||||||||| |||||||    
T  20654102 tttaggctaaactgcacttttcgacccctaagtttcaaaatgttgtgattttggcctcctatt 20654040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 469 - 519
Target Start/End: Complemental strand, 23039999 - 23039949
Alignment:
Q  469 caaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    |||||||| |||||||||||||||| ||| ||||||||| |||||| ||||    
T  23039999 caaaatcgtaacattttaaaacttataggtcgaaaagtgcagtttaacctt 23039949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 470 - 519
Target Start/End: Original strand, 245851 - 245900
Alignment:
Q  470 aaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    ||||||||||||||||||||| |||  ||||||||||| | |||||||||    
T  245851 aaaatcgcaacattttaaaacataggtggcgaaaagtgcactttagcctt 245900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 461 - 518
Target Start/End: Original strand, 23040284 - 23040341
Alignment:
Q  461 ataggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    |||||||||||||||||||| ||||||||||||  ||  |||||||| | ||||||||    
T  23040284 ataggggtcaaaatcgcaactttttaaaacttaagggatgaaaagtgtactttagcct 23040341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 521
Target Start/End: Original strand, 24025307 - 24025367
Alignment:
Q  460 aataggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagccttga 521  Q
    ||||| ||||||||| |||| |||||||||||||| |||||||||||| | |||| ||||||    
T  24025307 aatagaggtcaaaattgcaaaattttaaaacttag-gggcgaaaagtgcactttatccttga 24025367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 467 - 520
Target Start/End: Complemental strand, 26639087 - 26639034
Alignment:
Q  467 gtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagccttg 520  Q
    ||||||||| ||||||||| |||| ||| |||||||||||| | ||||||||||    
T  26639087 gtcaaaatcacaacattttgaaacatagggggcgaaaagtgcactttagccttg 26639034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 31648240 - 31648289
Alignment:
Q  469 caaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    ||||||||||||||||| |||| ||| || ||||||||| ||||||||||    
T  31648240 caaaatcgcaacattttgaaacataggggacgaaaagtgcagtttagcct 31648289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 38408883 - 38408932
Alignment:
Q  469 caaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    ||||||||||||||| |||||| |||||| |||||| || ||||||||||    
T  38408883 caaaatcgcaacattataaaacatagaggacgaaaaatgcagtttagcct 38408932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 126; Significance: 1e-64; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 213 - 517
Target Start/End: Original strand, 24597513 - 24597819
Alignment:
Q  213 tttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaat 312  Q
    ||||||||||| |||| |||||||||| ||||||||||||| ||| |||||||||  ||||||       |||||||| | ||| | |||||||| ||||    
T  24597513 tttaggctaaagtgcacttttcgcctcctatgtttcaaaatgttgtgattttggccccctattaaaaaaatggcaattttggcc-ccttcatcccaaaat 24597611  T
Q  313 tgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtca 411  Q
    ||||||||||||||| | ||||||||| |||||||||||||| || || |||||||||| |||||||||||||||||||||  |||||||||  ||||||    
T  24597612 tgctgagaagacgccacgtgtctcaaacaaggggccataatcgcaactttttgtaaagagaaggggtcaaaaaacatatttcccttatgttaggaggtca 24597711  T
Q  412 aaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtgga 509  Q
    ||||||||||||||||||||||||||  |  ||||||||||        |||| |||| ||||||||||||||||||||||||||||||||||||||| |    
T  24597712 aaagagcatatttccctaaacatagggggttacttttgccattttttttaatagggggacaaaatcgcaacattttaaaacttagagggcgaaaagtgaa 24597811  T
Q  510 gtttagcc 517  Q
    ||||||||    
T  24597812 gtttagcc 24597819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 216 - 517
Target Start/End: Original strand, 19195213 - 19195517
Alignment:
Q  216 aggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattgc 315  Q
    ||||||||||||||||||| || | |||||||||||||||||| |||||||   ||||||       | |||||| | ||| |||||||||  ||||||     
T  19195213 aggctaaactgcatttttcaccccctatgtttcaaaatattgcaattttggtcccctattaaaaaaatagcaattttggcccctttcatccaaaaattgt 19195312  T
Q  316 tgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaa 414  Q
    |||||||||||| |||||| ||||||||||||||||||| || || ||||||||||||||||||||||||||||||||  |||||||||  |||||||||    
T  19195313 tgagaagacgccacatgtcccaaaaaaggggccataatcacaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaaaa 19195412  T
Q  415 gagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtt 512  Q
    |||| ||||||||||||||||||  | |||||||||||        |||| ||||||||||| ||||||||||||||||||||||| |||||||| ||||    
T  19195413 gagcgtatttccctaaacatagggggtcacttttgccattttttttaatagggggtcaaaattgcaacattttaaaacttagagggtgaaaagtgaagtt 19195512  T
Q  513 tagcc 517  Q
    |||||    
T  19195513 tagcc 19195517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 215 - 518
Target Start/End: Original strand, 21224352 - 21224657
Alignment:
Q  215 taggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattg 314  Q
    ||||||||||||||||||||||| ||||||||||||||| |||| |||||||   ||||||       | |||||| | ||| |||||||||  ||||||    
T  21224352 taggctaaactgcatttttcgcc-cttatgtttcaaaatgttgcaattttggtcccctattaaaaaaatagcaattttggcccctttcatccaaaaattg 21224450  T
Q  315 ctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaa 413  Q
    ||||||||||||| | |||||||||||| ||||||||||| || || |||||||||||||||||||||||| |||||||  |||||||||  ||||||||    
T  21224451 ctgagaagacgccacgtgtctcaaaaaaagggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaa 21224550  T
Q  414 agagcatatttccctaaacataggatgccacttttgcc-annnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagt 511  Q
    ||||||||||||||||||||||||  | ||||||||||         || | |||||||||||||||||||||| ||||||||||||||||||||| |||    
T  21224551 agagcatatttccctaaacatagggggtcacttttgcctttttttttaacagggggtcaaaatcgcaacattttgaaacttagagggcgaaaagtgaagt 21224650  T
Q  512 ttagcct 518  Q
    |||||||    
T  21224651 ttagcct 21224657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 211 - 527
Target Start/End: Original strand, 27869190 - 27869509
Alignment:
Q  211 aatttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaa 310  Q
    |||| |||||||| |||| |||||||| | ||||||||||||| ||||||||||| |  ||||||       || ||||| | ||||| |||||||| ||    
T  27869190 aattaaggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgaccccctattaaaaaaatgacaattttggcctccttcatcccaaa 27869289  T
Q  311 attgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggt 409  Q
    |||||||||||||||||   |||| ||||||||||||||||||| || || |||||||||||||||||||||||| |||||||  |||||||||  ||||    
T  27869290 attgctgagaagacgccatgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggt 27869389  T
Q  410 caaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaataggggt-caaaatcgcaacattttaaaacttagagggcgaaaagtg 507  Q
    ||||||||||||||||||||||||||||  | |||||||||||        ||||||| | ||||||||||||||||| |||||||||||||||||||||    
T  27869390 caaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggctccaaaatcgcaacattttgaaacttagagggcgaaaagtg 27869489  T
Q  508 gagtttagccttgaatttat 527  Q
     |||||| |||  |||||||    
T  27869490 aagtttaacctataatttat 27869509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 216 - 518
Target Start/End: Original strand, 11843177 - 11843482
Alignment:
Q  216 aggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaattg 314  Q
    ||||||||||||| || ||||| | ||||||||||||| |||||||||||||| ||||||        |||||||| | ||| |||||||||| ||||||    
T  11843177 aggctaaactgcacttctcgccccctatgtttcaaaatgttgcgattttggctccctattaaaaaaaatggcaattttggcccctttcatcccaaaattg 11843276  T
Q  315 ctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttataggtcaaaa 414  Q
    ||||||||||||| | | |   |||||||||||||||||  || || ||||||| |||||||||||||||| |||||||| |||||||||  ||||||||    
T  11843277 ctgagaagacgccacgtattcaaaaaaaggggccataattgcaactttttgtaaggataaggggtcaaaaagcatattttccttatgttaggggtcaaaa 11843376  T
Q  415 gagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtt 512  Q
    |||||||||||||||||||||||| | |||||||||||        |||| |||||||||||||||||||||| |||||||  | ||||||||| |||||    
T  11843377 gagcatatttccctaaacataggaggtcacttttgccattttttttaatagggggtcaaaatcgcaacattttgaaacttaaggagcgaaaagtagagtt 11843476  T
Q  513 tagcct 518  Q
    ||||||    
T  11843477 tagcct 11843482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 217 - 519
Target Start/End: Complemental strand, 31494214 - 31493909
Alignment:
Q  217 ggctaaactgcatttttcgc-ctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaattg 314  Q
    |||||||||||||||||||| |||| |||||||||||| |||||||||||||  ||||||        |||||||| | ||| |||||||||  ||||||    
T  31494214 ggctaaactgcatttttcgcactct-atgtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccctttcatcctaaaattg 31494116  T
Q  315 ctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttata-ggtcaaa 413  Q
    ||||||||||||| | |||  ||||||||||||||||||| || || |||||||||||||||||||||||| |||||||| ||||||||| | |||||||    
T  31494115 ctgagaagacgccacgtgttccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatattttccttatgttagagggtcaaa 31494016  T
Q  414 agagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagt 511  Q
    ||||||||||||||||||||||||  | |||||||||||        |||| |||| |||||||| |||||||| |||||||| || |||||||||||||    
T  31494015 agagcatatttccctaaacatagg-ggtcacttttgccatttttgttaatagggggccaaaatcgtaacattttgaaacttaggggccgaaaagtggagt 31493917  T
Q  512 ttagcctt 519  Q
    ||||||||    
T  31493916 ttagcctt 31493909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 216 - 518
Target Start/End: Complemental strand, 20636923 - 20636618
Alignment:
Q  216 aggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaattg 314  Q
    |||||||| |||| |||||||| | ||||||||||||| ||||||||||| |  ||||||        |||||||| | ||| ||| |||||| ||||||    
T  20636923 aggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgaccccctatttaaaaaaatggcaattttggcccctt-catcccaaaattg 20636825  T
Q  315 ctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaa 413  Q
    ||||||| ||||| | |||| ||||||||||| ||||||| || || |||||||||||||||||||||||| |||||||  |||||||||  ||||||||    
T  20636824 ctgagaaaacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaa 20636725  T
Q  414 agagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagt 511  Q
    ||||||||||||||||||||||||  | |||||||||||        |||| |||| ||||||||||||||||||||||||||||||| ||||||| |||    
T  20636724 agagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttaaaacttagagggcaaaaagtgaagt 20636625  T
Q  512 ttagcct 518  Q
    |||||||    
T  20636624 ttagcct 20636618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 213 - 518
Target Start/End: Original strand, 48175958 - 48176267
Alignment:
Q  213 tttaggctaaactgca-tttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaa 310  Q
    |||||||||||||||| ||||||||| | ||||||||| ||| |||||||||||||  ||||||        | |||||| | ||| |||||||||| ||    
T  48175958 tttaggctaaactgcactttttcgccccctatgtttcataatgttgcgattttggccccctattagaaaaaatagcaattttggcccctttcatcccaaa 48176057  T
Q  311 attgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttataggtc 410  Q
    |||||| |||||| ||| | |||| || |||||||| ||||||| || || ||||||||||||||||||||||||||||||||  |||||||||  ||||    
T  48176058 attgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggggtc 48176157  T
Q  411 aaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtgg 508  Q
    |||||||||||||||||||||||||||  |  ||||||||||        |||| |||| ||||||||||||||||| |||||||| ||||||||||| |    
T  48176158 aaaagagcatatttccctaaacatagggagttacttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttagggggcgaaaagtag 48176257  T
Q  509 agtttagcct 518  Q
    ||||||||||    
T  48176258 agtttagcct 48176267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 241 - 518
Target Start/End: Original strand, 13577811 - 13578089
Alignment:
Q  241 tatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaa 340  Q
    ||||||||||||| |||||||||||||  ||||||       |||||||| | ||| |||||||||| ||||||||||||||||||| | |||  |||||    
T  13577811 tatgtttcaaaatgttgcgattttggccccctattaaaaaaatggcaattttggcccctttcatcccaaaattgctgagaagacgccacgtgttccaaaa 13577910  T
Q  341 aaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttataggtcaaaagagcatatttccctaaacataggatg 440  Q
    |||||||||||||  || || |||||| |||||| |||||||||| |||||||  |||||||||  |||||||||||||||||||| ||||||||||  |    
T  13577911 aaggggccataatttcaactttttgtatagataaagggtcaaaaagcatatttcccttatgttaggggtcaaaagagcatatttccttaaacatagg-gg 13578009  T
Q  441 ccacttttgcca-nnnnnnnaatag-gggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
     |||||||||||        ||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||    
T  13578010 tcacttttgccattttttttaatagagggtcaaaatcgcaacattttgaaacttagggggcgaaaagtagagtttagcct 13578089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 298 - 516
Target Start/End: Complemental strand, 2331235 - 2331015
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttct 397  Q
    |||||||||  ||||||||||||||||||| | |||| |||||||  |||||||||| || || ||||||||||||||| |||||||| |||||||  ||    
T  2331235 ctttcatccaaaaattgctgagaagacgccacttgtcccaaaaaataggccataatcgcaactttttgtaaagataaggagtcaaaaagcatatttccct 2331136  T
Q  398 tatgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaat-aggggtcaaaatcgcaacattttaaaacttaga 495  Q
    |||||||  ||||||||||||||||||||||||||||||||  | |||||||||||       ||| ||||| |||||| ||||||||||||||||||||    
T  2331135 tatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttaataaggggccaaaattgcaacattttaaaacttaga 2331036  T
Q  496 gggcgaaaagtggagtttagc 516  Q
    || ||||||||| ||||||||    
T  2331035 ggacgaaaagtgaagtttagc 2331015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 300 - 517
Target Start/End: Complemental strand, 42271552 - 42271333
Alignment:
Q  300 ttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttctta 399  Q
    |||||||  ||||||||||||||||||| | |||  ||||||| ||||||||||| || || |||||||| ||||||||||||||| |||||||  ||||    
T  42271552 ttcatccgaaaattgctgagaagacgccacgtgttccaaaaaaagggccataatcgcaactttttgtaaacataaggggtcaaaaagcatatttccctta 42271453  T
Q  400 tgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaatagg-ggtcaaaatcgcaacattttaaaacttagagg 497  Q
    |||||  ||||||||||||||||||||||||||||||||  | |||||||||||       |||||| || ||||||||||||||||| |||||||||||    
T  42271452 tgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttaataggaggccaaaatcgcaacattttgaaacttagagg 42271353  T
Q  498 gcgaaaagtggagtttagcc 517  Q
    ||||||| || | |||||||    
T  42271352 gcgaaaaatgaaatttagcc 42271333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 300 - 518
Target Start/End: Original strand, 19919687 - 19919906
Alignment:
Q  300 ttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttctta 399  Q
    |||||||| ||||||||||||| ||||  | |||| |||||||||||| |||||| || || ||||||||||||||||||||||||||||||||| ||||    
T  19919687 ttcatcccaaaattgctgagaaaacgctacgtgtcccaaaaaaggggctataatcacaactttttgtaaagataaggggtcaaaaaacatattttcctta 19919786  T
Q  400 tgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgcc-annnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagag 496  Q
    |||||  ||||||||||||||||||| ||||||||| ||  | ||||||||||         |||| |||||||||||||||||||||| ||||||||||    
T  19919787 tgttaggaggtcaaaagagcatattt-cctaaacat-gggggtcacttttgcctttttttttaatagggggtcaaaatcgcaacattttgaaacttagag 19919884  T
Q  497 ggcgaaaagtggagtttagcct 518  Q
    ||||||||||| ||||||||||    
T  19919885 ggcgaaaagtgaagtttagcct 19919906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 312 - 514
Target Start/End: Original strand, 3562529 - 3562733
Alignment:
Q  312 ttgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtc 410  Q
    |||||||||||||||| | ||||  |||||||||||||||||| || || |||||||||||||||||||||||| |||||||  |||||||||  |||||    
T  3562529 ttgctgagaagacgccacgtgtcctaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtc 3562628  T
Q  411 aaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtgg 508  Q
    |||||||||||||||||||||||||||  | |||||||||||        |||| |||| |||||||| |||||||| ||||||||||| |||||||||     
T  3562629 aaaagagcatatttccctaaacatagg-ggtcacttttgccattttttttaatagggggccaaaatcgtaacattttgaaacttagaggacgaaaagtga 3562727  T
Q  509 agttta 514  Q
    ||||||    
T  3562728 agttta 3562733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 298 - 517
Target Start/End: Complemental strand, 17305987 - 17305764
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaa-ggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttc 396  Q
    |||||||||| |||||| |||||||||||| |||||| ||||||| |||| ||||||| || || |||||||| ||||||||||||||| |||||||  |    
T  17305987 ctttcatcccaaaattgatgagaagacgccacatgtcccaaaaaagggggtcataatcacaactttttgtaaaaataaggggtcaaaaagcatatttccc 17305888  T
Q  397 ttatgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgcca--nnnnnnnaata-ggggtcaaaatcgcaacattttaaaactt 492  Q
    ||||||||  ||||||||||||||||||| ||||||||||||  | |||||||||||         |||| |||| ||||||||||||||||| ||||||    
T  17305887 ttatgttaggaggtcaaaagagcatattttcctaaacatagg-ggtcacttttgccatttttttttaatagggggccaaaatcgcaacattttgaaactt 17305789  T
Q  493 agagggcgaaaagtggagtttagcc 517  Q
    ||||| ||||||||| |||||||||    
T  17305788 agaggacgaaaagtgaagtttagcc 17305764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 216 - 518
Target Start/End: Complemental strand, 8527099 - 8526795
Alignment:
Q  216 aggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattgc 315  Q
    |||||||| |||| |||||||| | ||| ||||||||| |||||||||||||  ||||||       |||||||| | |||   |||||||| |||||||    
T  8527099 aggctaaagtgcacttttcgccccctatatttcaaaatgttgcgattttggccccctattaaaaaaatggcaattttggccctcttcatcccaaaattgc 8527000  T
Q  316 tgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaa 414  Q
    |||||||| ||| | |||||||||||||||||||||||  || || |||||||| || |||||||||||| |||||||  |||||||||  ||||||||     
T  8526999 tgagaagatgccacgtgtctcaaaaaaggggccataattgcaactttttgtaaaaat-aggggtcaaaaagcatatttcccttatgttaggaggtcaaat 8526901  T
Q  415 gagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtt 512  Q
    |||||||||| ||||||||||||  | || ||||||||        |||| ||||||||||| |||| ||||| |||||||||||| |||||||| | ||    
T  8526900 gagcatattttcctaaacatagggggtcatttttgccatttttattaatagggggtcaaaattgcaaaattttgaaacttagagggtgaaaagtgaaatt 8526801  T
Q  513 tagcct 518  Q
    ||||||    
T  8526800 tagcct 8526795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 348 - 518
Target Start/End: Complemental strand, 20638663 - 20638490
Alignment:
Q  348 cataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttat-aggtcaaaagagcatatttccctaaacataggatgccactt 446  Q
    ||||||| || || |||||||||||||||||||||||| |||||||  |||||||||  ||||||||||||||||||||||||||||||||  | |||||    
T  20638663 cataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactt 20638564  T
Q  447 ttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    ||||||        |||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  20638563 ttgccattttttttaatagggggccaaaatcgcaacattttaaaacttagagggcaaaaagtgaagtttagcct 20638490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 217 - 452
Target Start/End: Original strand, 35337523 - 35337759
Alignment:
Q  217 ggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattgct 316  Q
    ||||||| |||| ||||||||  |||||||| ||||||||||  ||||||   ||||||       | |||||| | ||| ||||||||   |||||  |    
T  35337523 ggctaaattgcacttttcgccctttatgttttaaaatattgcagttttggtcccctattaaaaaaatagcaattttggcccctttcatcaaaaaattatt 35337622  T
Q  317 gagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaag 415  Q
    ||||||||||| | |||| ||||||||||| ||||||| || || |||||||||||||||||||||||| |||||||  |||||||||  ||||||||||    
T  35337623 gagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaag 35337722  T
Q  416 agcatatttccctaaacataggatgccacttttgcca 452  Q
    ||||||||||||||||||||||  | |||||||||||    
T  35337723 agcatatttccctaaacatagggggtcacttttgcca 35337759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 298 - 436
Target Start/End: Original strand, 36746585 - 36746724
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttct 397  Q
    |||||||||| |||||| |||||||||||| | |||| ||||||||||| ||||||| || || |||||||||||||||||| ||||  ||||||| |||    
T  36746585 ctttcatcccaaaattgttgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggttaaaaggcatatttctct 36746684  T
Q  398 tatgtta-taggtcaaaagagcatatttccctaaacatag 436  Q
    |||||||  |||||||||||||||||||||||||||||||    
T  36746685 tatgttaggaggtcaaaagagcatatttccctaaacatag 36746724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 304 - 519
Target Start/End: Complemental strand, 14624818 - 14624606
Alignment:
Q  304 tcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtt 403  Q
    |||| ||||||||||||| | ||| | |||| ||||||||||||||||||  || || ||||||||||||| ||||||||||  ||||||  ||||||||    
T  14624818 tcccaaaattgctgagaacatgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaagggtcaaaaagtatatttcccttatgtt 14624719  T
Q  404 ataggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaataggggtcaaaatcgcaacattttaaaacttagagggcgaaa 503  Q
    || |||||||||||||||||| ||||||||| ||  |  ||||||||||       |||||||| ||||||||||| ||||| |||||||| || |||||    
T  14624718 atgggtcaaaagagcatattttcctaaacattgg--gttacttttgcca-ttttttaataggggccaaaatcgcaatattttgaaacttaggggacgaaa 14624622  T
Q  504 agtggagtttagcctt 519  Q
    |||| |||||||||||    
T  14624621 agtgtagtttagcctt 14624606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 285 - 452
Target Start/End: Original strand, 41452318 - 41452486
Alignment:
Q  285 gcaattctagcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa 384  Q
    |||||| | ||| |||||||||  ||||||||||||||||| | | |||| ||||||||||| ||||||| || || |||||||||||||||||||||||    
T  41452318 gcaattttggcccctttcatccaaaaattgctgagaagacgacacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa 41452417  T
Q  385 aacatatttttcttatgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgcca 452  Q
    | |||||||  |||||||||  |||||| ||||| ||||||||||||||||| |  | |||||||||||    
T  41452418 agcatatttcccttatgttaggaggtcagaagagtatatttccctaaacataaggggtcacttttgcca 41452486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 309 - 432
Target Start/End: Complemental strand, 4193761 - 4193637
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttttcttatgttatag 407  Q
    |||||||||| |||||| | | |||||||||||||||||||||||  || || |||| |||||||||||||||||| | ||||||| ||||||||||  |    
T  4193761 aaattgctgaaaagacgtcacgtgtctcaaaaaaggggccataattgcaactttttgaaaagataaggggtcaaaagatcatatttctcttatgttaagg 4193662  T
Q  408 gtcaaaagagcatatttccctaaac 432  Q
    |||||||||||||||||||||||||    
T  4193661 gtcaaaagagcatatttccctaaac 4193637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 298 - 518
Target Start/End: Original strand, 44077952 - 44078175
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctcttt-gtaaagataaggggtcaaaaaacatatttttc 396  Q
    ||||| |||| |||||||| ||||||||||   |||| |||||| |  | ||||||| || || ||| ||||||||||||||||||||||||||||| ||    
T  44077952 ctttcgtcccaaaattgctaagaagacgccatgtgtcccaaaaaggatgtcataatcgcaacttttttgtaaagataaggggtcaaaaaacatatttctc 44078051  T
Q  397 ttatgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaactta 493  Q
    ||||||||  |||||||||||||||||||||||||||||   | | |||||| ||||        |||| ||||||||||||||||| ||||||||||||    
T  44078052 ttatgttaggaggtcaaaagagcatatttccctaaacatgataggtcactttcgccatttttttaaatagggggtcaaaatcgcaacgttttaaaactta 44078151  T
Q  494 gagggcgaaaagtggagtttagcct 518  Q
    |||| | ||||||| ||||||||||    
T  44078152 gaggac-aaaagtgcagtttagcct 44078175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 362 - 514
Target Start/End: Original strand, 18754412 - 18754567
Alignment:
Q  362 tttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnn 459  Q
    ||||||||||||||||||||||||||||||||  |||||||||   ||||||||||||||||||||||||||||||     |||||||||||            
T  18754412 tttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagaggatcacttttgccatttttttt 18754511  T
Q  460 aatagggg-tcaaaatcgcaacattttaaaacttagagggcgaaaagtggagttta 514  Q
    ||||||||  ||||||||||||||||| |||||||| |||||||||||||||||||    
T  18754512 aataggggaccaaaatcgcaacattttgaaacttagggggcgaaaagtggagttta 18754567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 309 - 437
Target Start/End: Original strand, 10023878 - 10024006
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-tag 407  Q
    |||||||||||||||| || | |||| ||||| |||||||||| || || || ||||||||||||||||||||||||| ||||||| ||||||| |   |    
T  10023878 aaattgctgagaagacaccacgtgtcccaaaa-aggggccatattcgcaactttttgtaaagataaggggtcaaaaaaaatattttccttatgtaagggg 10023976  T
Q  408 gtcaaaagagcatatttccctaaacatagg 437  Q
    ||||||||||||||||||||||||||||||    
T  10023977 gtcaaaagagcatatttccctaaacatagg 10024006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 216 - 515
Target Start/End: Complemental strand, 39182238 - 39181939
Alignment:
Q  216 aggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattgc 315  Q
    ||||||||||||| |||||||| | || |||| ||||| |||| |||||| |  ||||||       || ||||| | ||| ||||  |||| |||||||    
T  39182238 aggctaaactgcacttttcgccccctaagtttaaaaatgttgcaattttgaccccctattaaaaaaatgacaattttggccccttttgtcccaaaattgc 39182139  T
Q  316 tgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttttcttatgttataggtcaaaa 414  Q
    |||||| || || | |||| ||||| || |||||||||| || || ||||  ||||||||||||||||| | |||||||  |||||||||| ||||||||    
T  39182138 tgagaaaacaccacgtgtcccaaaacagaggccataatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttat-ggtcaaaa 39182040  T
Q  415 gagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaatagg-ggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtt 512  Q
    |||||||||||||||||||| ||  | || ||||||||        |||||| || |||||||||||||||||||||||| |||||| ||||||| ||||    
T  39182039 gagcatatttccctaaacatggg--gtcatttttgccattttttttaataggaggccaaaatcgcaacattttaaaacttggagggccaaaagtgcagtt 39181942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 285 - 517
Target Start/End: Complemental strand, 10655564 - 10655330
Alignment:
Q  285 gcaattctagcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa 384  Q
    |||||| | ||| |||||||||| |||||||| |||||| ||| | |||| || |||| ||| ||||||| || || |||||||||||||||||| ||||    
T  10655564 gcaattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaatgggtcataatcgcaactttttgtaaagataaggggttaaaa 10655465  T
Q  385 aacatatttttcttatgttatagg-tcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaat-aggggtcaaaatcgcaaca 481  Q
    || |||||| |||||| |||  || | |||||||||||||||||||||||||||    || |||||| |        ||| ||||| |||||  ||||||    
T  10655464 aa-atatttctcttatattaggggattaaaagagcatatttccctaaacataggggatcatttttgcaattttttttaataaggggccaaaactgcaaca 10655366  T
Q  482 ttttaaaacttagagggcgaaaagtggagtttagcc 517  Q
    ||||||||||||| |||| |||||||||||||||||    
T  10655365 ttttaaaacttagggggcaaaaagtggagtttagcc 10655330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 215 - 434
Target Start/End: Complemental strand, 19493622 - 19493404
Alignment:
Q  215 taggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattg 314  Q
    |||| ||||||||||||||||||  ||| |||| ||||| ||||||||||| |  ||||||       | |||||| | ||| |||||||||| |||| |    
T  19493622 taggttaaactgcatttttcgccctttaagttttaaaatgttgcgattttgaccccctattaaaaaa-tagcaattttggcccctttcatcccaaaatgg 19493524  T
Q  315 ctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttcttatgttataggtcaaa 413  Q
    ||||||||||||| | ||||  |||| ||||||||||||| || || ||||  ||||||| ||||||||||| |||||||| ||||||||   |||||||    
T  19493523 ctgagaagacgccacgtgtcctaaaacaggggccataatcaca-ctttttgagaagataaagggtcaaaaaatcatattttccttatgtttggggtcaaa 19493425  T
Q  414 agagcatatttccctaaacat 434  Q
    | ||||||||||| |||||||    
T  19493424 atagcatatttccataaacat 19493404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 286 - 384
Target Start/End: Complemental strand, 6650744 - 6650646
Alignment:
Q  286 caattctagcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa 384  Q
    ||||| ||||| ||||| |||| |||||| |||||||||||| |||||||||||| ||||||||||||| || || ||||  |||||||||||||||||    
T  6650744 caattttagcccctttcgtcccaaaattgatgagaagacgccacatgtctcaaaacaggggccataatcgcaactttttgagaagataaggggtcaaaa 6650646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 309 - 434
Target Start/End: Complemental strand, 26385472 - 26385346
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttcttatgttatag 407  Q
    |||||||| | |||||||| |||||| ||||| | ||||||||||| || || ||||  |||||||| |||||||| | ||||||| ||||||||||  |    
T  26385472 aaattgctaataagacgccacatgtcccaaaacatgggccataatcgcaactttttgagaagataagaggtcaaaatatcatatttctcttatgttaggg 26385373  T
Q  408 gtcaaaagagcatatttccctaaacat 434  Q
    ||||||| |||||||||||||||||||    
T  26385372 gtcaaaatagcatatttccctaaacat 26385346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 294 - 434
Target Start/End: Original strand, 21264134 - 21264276
Alignment:
Q  294 gcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatt 392  Q
    |||||||||||||   |||||||||||||||| | |||||||||||| |||| ||| |||| ||  | ||| |||||||||  ||||||||||  |||||    
T  21264134 gcctctttcatccaagaattgctgagaagacgtcacatgtctcaaaatagggtccacaatcacagttttttataaagataaaaggtcaaaaaagtatatt 21264233  T
Q  393 tttcttatgttatagg-tcaaaagagcatatttccctaaacat 434  Q
    | |||| ||||| ||| |||||| |||||||||||||||||||    
T  21264234 tctcttctgttagaggatcaaaatagcatatttccctaaacat 21264276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 309 - 434
Target Start/End: Complemental strand, 26126465 - 26126339
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttcttatgttatag 407  Q
    ||||||| ||||||| | | | |||| ||||| ||||||||||||| || || ||||  ||||||||||||||||| | |||||||  |||||||||  |    
T  26126465 aaattgcagagaagatgtctcgtgtcccaaaacaggggccataatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttaggg 26126366  T
Q  408 gtcaaaagagcatatttccctaaacat 434  Q
    ||||||| |||||||||||||||||||    
T  26126365 gtcaaaaaagcatatttccctaaacat 26126339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 309 - 427
Target Start/End: Original strand, 24448135 - 24448256
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctca-aaaaaggggccataatcccacctctttgtaaagataaggggtca-aaaaacatatttttcttatgtta-t 405  Q
    ||||||||||||||||| ||| |||| |  ||||||||||||||||| ||  | |||||||||||||||||||| ||||||||||||  |||||||||      
T  24448135 aaattgctgagaagacgtcgcgtgtcccttaaaaaggggccataatcacatttttttgtaaagataaggggtcataaaaacatatttcccttatgttagg 24448234  T
Q  406 aggtcaaaagagcatatttccc 427  Q
     |||||||| ||||||||||||    
T  24448235 gggtcaaaaaagcatatttccc 24448256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 298 - 519
Target Start/End: Original strand, 33237495 - 33237718
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttc 396  Q
    |||||||||| ||||||||||||||||||| | |||| ||||| || || ||||||| || || |||   ||| ||||||||||||| | ||||||   |    
T  33237495 ctttcatcccaaaattgctgagaagacgccacgtgtcccaaaacagtggtcataatcacaacttttttagaaggtaaggggtcaaaatatcatattaccc 33237594  T
Q  397 ttatgttatagg-tcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnn-aataggg-gtcaaaatcgcaacattttaaaactta 493  Q
    |||| |||  || | ||||||||||||| |||||||||| || ||  ||||||||||        ||||||| |||||||||||||||||||||||| ||    
T  33237595 ttattttagggggtgaaaagagcatattgccctaaacatggggtg--acttttgccatattttttaatagggagtcaaaatcgcaacattttaaaaccta 33237692  T
Q  494 gagggcgaaaagtggagtttagcctt 519  Q
    |||||| |||| ||||||||| ||||    
T  33237693 gagggcaaaaaatggagtttaacctt 33237718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 348 - 436
Target Start/End: Original strand, 21225680 - 21225768
Alignment:
Q  348 cataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttataggtcaaaagagcatatttccctaaacatag 436  Q
    ||||||| || || ||||||||||  |||||||||| | |||||||  |||||||||  ||||||||||||||||||||||||||||||    
T  21225680 cataatcgcaactttttgtaaagacgaggggtcaaatagcatatttcccttatgttaggggtcaaaagagcatatttccctaaacatag 21225768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 336 - 434
Target Start/End: Complemental strand, 5111623 - 5111524
Alignment:
Q  336 caaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttttcttatgttataggtcaaaagagcatatttccctaaacat 434  Q
    ||||||||||||||||||| || || ||||  ||||||||||||||||| | |||||||  |||||||||  |||||||||| ||||||| |||||||||    
T  5111623 caaaaaaggggccataatcgcaactttttgagaagataaggggtcaaaatatcatatttcccttatgttaggggtcaaaagaacatattttcctaaacat 5111524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 342 - 527
Target Start/End: Original strand, 9157176 - 9157360
Alignment:
Q  342 aggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttcttatgttataggtcaaaagagcatatttccctaaacataggatg 440  Q
    |||||| |||||| || || ||||  |||||||| |||||||| | |||||||  |||||||||  |||||||||||||||||| |||||||||  |  |    
T  9157176 aggggctataatcgcaactttttgagaagataagtggtcaaaagatcatatttcacttatgttaggggtcaaaagagcatattttcctaaacatttg--g 9157273  T
Q  441 ccacttttgccannnnnnnaataggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagccttgaatttat 527  Q
     |||||||||||       ||||||| |||||||| ||||||||| ||| |||| || |||||| || |||||||||| ||| ||||    
T  9157274 tcacttttgccatttttttaatagggatcaaaatcacaacattttgaaatttaggggacgaaaaatgcagtttagcctagaaattat 9157360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 376 - 504
Target Start/End: Original strand, 6798074 - 6798201
Alignment:
Q  376 gggtcaaaaaacatatttttcttatgttatagg-tcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaataggggtcaaaat 474  Q
    |||||||||| |||||||  ||||||||| ||| ||||||||||||||||||||||||||  |||  || | ||| ||       ||||||| |||||||    
T  6798074 gggtcaaaaatcatatttcccttatgttagagggtcaaaagagcatatttccctaaacatgagat--caatattgtcatttttttaatagggatcaaaat 6798171  T
Q  475 cgcaacattttaaaacttagagggcgaaaa 504  Q
    ||||||||||||||| ||||| ||||||||    
T  6798172 cgcaacattttaaaatttagaaggcgaaaa 6798201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 368 - 516
Target Start/End: Complemental strand, 25002859 - 25002712
Alignment:
Q  368 aagataaggggtcaaaaaa-catatttttcttatgttataggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaataggg 466  Q
    ||||||||||||||||| | |||||||   ||||||||  |||||||||||||| ||||||||||||| ||  | || ||||||||       |||||||    
T  25002859 aagataaggggtcaaaagatcatatttcctttatgttaggggtcaaaagagcatgtttccctaaacatggg--gtcatttttgccatttatttaataggg 25002762  T
Q  467 gtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagc 516  Q
    | ||||||| ||||||||| |||||||| |  ||||||||| ||||||||    
T  25002761 gccaaaatcacaacattttgaaacttagggcacgaaaagtgcagtttagc 25002712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 460 - 518
Target Start/End: Complemental strand, 24448103 - 24448044
Alignment:
Q  460 aatagggg-tcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    |||||||| ||||||||||||||||||||||||| | |||||||||||| ||||||||||    
T  24448103 aataggggatcaaaatcgcaacattttaaaacttggggggcgaaaagtgcagtttagcct 24448044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 309 - 434
Target Start/End: Complemental strand, 24464787 - 24464660
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttcttatgttatag 407  Q
    ||||||||||||||||||| |||||| ||||| |  | |||||||| || |  ||||  ||||||||||||||||| | |||||||  |||||||||  |    
T  24464787 aaattgctgagaagacgccacatgtcacaaaacaatgaccataatcgcaacattttgagaagataaggggtcaaaagatcatatttcccttatgttaggg 24464688  T
Q  408 g-tcaaaagagcatatttccctaaacat 434  Q
    | |||||||| |||||||||||||||||    
T  24464687 ggtcaaaagaacatatttccctaaacat 24464660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 464 - 519
Target Start/End: Original strand, 39182184 - 39182239
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    ||||||||||| |||||||||| |||||||| |||||||||||| |||||||||||    
T  39182184 ggggtcaaaattgcaacatttttaaacttagggggcgaaaagtgcagtttagcctt 39182239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 464 - 514
Target Start/End: Original strand, 19493567 - 19493617
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagttta 514  Q
    |||||||||||||||||||||||||||||| |||||||||| || ||||||    
T  19493567 ggggtcaaaatcgcaacattttaaaacttaaagggcgaaaaatgcagttta 19493617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 519
Target Start/End: Original strand, 25002961 - 25003011
Alignment:
Q  469 caaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    |||||||||||||||||||||||||| |||||||||||  |||||||||||    
T  25002961 caaaatcgcaacattttaaaacttagggggcgaaaagtacagtttagcctt 25003011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 407 - 519
Target Start/End: Complemental strand, 6650653 - 6650542
Alignment:
Q  407 ggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaag 505  Q
    ||||||||||||||||||||||||| || || | ||  ||||||||       |||| |||| ||||||||||| |||||||||||||| ||||||| ||    
T  6650653 ggtcaaaagagcatatttccctaaatatggggtccc--ttttgccatttttttaataaggggccaaaatcgcaaaattttaaaacttagggggcgaacag 6650556  T
Q  506 tggagtttagcctt 519  Q
    || |||||||||||    
T  6650555 tgcagtttagcctt 6650542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 336 - 434
Target Start/End: Original strand, 4571463 - 4571563
Alignment:
Q  336 caaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttcttatgttatagg-tcaaaagagcatatttccctaaaca 433  Q
    ||||| |||||||| |||| || || ||||  ||||||||||||||||| | |||||||  |||||||||| || | |||||||||||||||||||||||    
T  4571463 caaaacaggggccacaatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttatggggtaaaaagagcatatttccctaaaca 4571562  T
Q  434 t 434  Q
    |    
T  4571563 t 4571563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 298 - 386
Target Start/End: Complemental strand, 5087218 - 5087130
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaa 386  Q
    ||||| |||| |||||| |||||||||||| | |||| ||||| ||||  ||||||| || || |||| ||||||||||||||||||||    
T  5087218 ctttcgtcccaaaattgatgagaagacgccacgtgtcccaaaatagggatcataatcgcaactttttgaaaagataaggggtcaaaaaa 5087130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 460 - 503
Target Start/End: Complemental strand, 9157088 - 9157045
Alignment:
Q  460 aataggggtcaaaatcgcaacattttaaaacttagagggcgaaa 503  Q
    |||||||| |||||||||||||||||||||| ||||||||||||    
T  9157088 aataggggccaaaatcgcaacattttaaaacctagagggcgaaa 9157045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 464 - 519
Target Start/End: Original strand, 20636869 - 20636924
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    |||||||||||||||||||||| |||| ||| |||||||||||| | |||||||||    
T  20636869 ggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcctt 20636924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 464 - 519
Target Start/End: Complemental strand, 27869249 - 27869194
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    |||||||||||||||||||||| |||| ||| |||||||||||| | |||||||||    
T  27869249 ggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcctt 27869194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 368 - 439
Target Start/End: Complemental strand, 29051770 - 29051699
Alignment:
Q  368 aagataaggggtcaaaaaacatatttttcttatgttataggtcaaaagagcatatttccctaaacataggat 439  Q
    |||||||||||||||||| ||| ||| |||||| |||| ||||||| ||||||||||  |||||||| ||||    
T  29051770 aagataaggggtcaaaaatcatttttctcttatattatgggtcaaaggagcatatttttctaaacatgggat 29051699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 309 - 422
Target Start/End: Original strand, 39440213 - 39440328
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttttcttatgtta-ta 406  Q
    |||||| |||||||||||| ||||||  |||| ||||| ||||||| || || |||| ||||||||||| |||||| | |||||||  |||||||||  |    
T  39440213 aaattgttgagaagacgccacatgtcctaaaacaggggtcataatcgcaactttttgaaaagataagggatcaaaagatcatatttcccttatgttagga 39440312  T
Q  407 ggtcaaaagagcatat 422  Q
    |||||||||| |||||    
T  39440313 ggtcaaaagatcatat 39440328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 295 - 384
Target Start/End: Complemental strand, 5348253 - 5348163
Alignment:
Q  295 cctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgta-aagataaggggtcaaaa 384  Q
    |||||||| |||| ||||||||||||||||| | ||| || ||||| ||| ||||||||| || || ||| || |||||||||||||||||    
T  5348253 cctctttcgtcccaaaattgctgagaagacgtcacatatcccaaaacaggagccataatcgcaactttttttagaagataaggggtcaaaa 5348163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 286 - 384
Target Start/End: Original strand, 9822170 - 9822267
Alignment:
Q  286 caattctagcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa 384  Q
    ||||| ||||| ||||| |||| |||||||||||||||||||   |||| | ||||||||| ||||||| || || ||||  |||||||||||||||||    
T  9822170 caattttagcccctttcgtcccaaaattgctgagaagacgccatgtgtc-ccaaaaaggggtcataatcgcaactttttgagaagataaggggtcaaaa 9822267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 286 - 384
Target Start/End: Original strand, 10724095 - 10724192
Alignment:
Q  286 caattctagcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa 384  Q
    ||||| ||||| ||||| |||| |||||||||||||||||||   |||| | ||||||||| ||||||| || || ||||  |||||||||||||||||    
T  10724095 caattttagcccctttcgtcccaaaattgctgagaagacgccatgtgtc-ccaaaaaggggtcataatcgcaactttttgagaagataaggggtcaaaa 10724192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 298 - 384
Target Start/End: Complemental strand, 15681852 - 15681766
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa 384  Q
    ||||| |||| |||||  |||||||||||| | |||| |||||||| |||||||||| || || ||||  |||||||||||||||||    
T  15681852 ctttcgtcccaaaatttatgagaagacgccacgtgtcccaaaaaagaggccataatcgcaactttttgacaagataaggggtcaaaa 15681766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 460 - 518
Target Start/End: Original strand, 21810087 - 21810145
Alignment:
Q  460 aataggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    ||||||||| |||||| ||| |||||||||||||| |||||||||||| | ||||||||    
T  21810087 aataggggttaaaatcacaatattttaaaacttagggggcgaaaagtgcactttagcct 21810145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 2331274 - 2331323
Alignment:
Q  469 caaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    |||||| ||||||||||||||| ||| |||||||||||| ||||||||||    
T  2331274 caaaattgcaacattttaaaacatagggggcgaaaagtgcagtttagcct 2331323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 33237464 - 33237415
Alignment:
Q  469 caaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    ||||||||||||||||||||| |||||||| |||||||  ||||||||||    
T  33237464 caaaatcgcaacattttaaaatttagagggtgaaaagtacagtttagcct 33237415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 464 - 504
Target Start/End: Original strand, 23373672 - 23373712
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaa 504  Q
    ||||| ||||||||||||||||||||||||| |||||||||    
T  23373672 ggggttaaaatcgcaacattttaaaacttagggggcgaaaa 23373712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 463 - 507
Target Start/End: Original strand, 24448288 - 24448332
Alignment:
Q  463 aggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtg 507  Q
    ||||||||||||||||||||||||||||||| | || ||||||||    
T  24448288 aggggtcaaaatcgcaacattttaaaacttaaatggagaaaagtg 24448332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 514
Target Start/End: Complemental strand, 3403106 - 3403055
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagaggg-cgaaaagtggagttta 514  Q
    |||||||||||||||||||||||||||| || ||| ||||||||| ||||||    
T  3403106 ggggtcaaaatcgcaacattttaaaactcagggggtcgaaaagtgcagttta 3403055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 264
Target Start/End: Original strand, 23080818 - 23080865
Alignment:
Q  217 ggctaaactgcatttttcgcctcttatgtttcaaaatattgcgatttt 264  Q
    |||||||||||| |||| ||| |||| |||||||||||||||||||||    
T  23080818 ggctaaactgcactttttgccccttaagtttcaaaatattgcgatttt 23080865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 519
Target Start/End: Complemental strand, 23658831 - 23658772
Alignment:
Q  460 aataggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    ||||| || |||||||||||||||||||||||||| |  ||||||||| |||||| ||||    
T  23658831 aatagaggccaaaatcgcaacattttaaaacttagggatcgaaaagtgcagtttaacctt 23658772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 298 - 434
Target Start/End: Original strand, 3403133 - 3403271
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttc 396  Q
    ||||| |||| ||||| ||||| ||||||| |||||| |||||||| || ||||||| ||  | ||||  || ||||||| |||||| | |||||||  |    
T  3403133 ctttcgtcccaaaattcctgaggagacgccacatgtcccaaaaaagtggtcataatcgcaagtttttgagaacataagggatcaaaagatcatatttccc 3403232  T
Q  397 ttatgttatagg-tcaaaagagcatatttccctaaacat 434  Q
    ||||||||  || |||||||||||||||| |||| ||||    
T  3403233 ttatgttagggggtcaaaagagcatattttcctatacat 3403271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 514
Target Start/End: Complemental strand, 10023839 - 10023789
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagttta 514  Q
    ||||||||| ||||||||||||||||  ||| |||||||||||| ||||||    
T  10023839 ggggtcaaactcgcaacattttaaaatatagggggcgaaaagtgcagttta 10023789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 212 - 266
Target Start/End: Original strand, 21225573 - 21225627
Alignment:
Q  212 atttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttgg 266  Q
    ||||||||||||||||| |||||||||| || |||| ||||| ||| ||||||||    
T  21225573 atttaggctaaactgcaattttcgcctcctaagttttaaaatgttgtgattttgg 21225627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 469 - 507
Target Start/End: Original strand, 43517168 - 43517206
Alignment:
Q  469 caaaatcgcaacattttaaaacttagagggcgaaaagtg 507  Q
    |||||||||||||||||||||||||| || |||||||||    
T  43517168 caaaatcgcaacattttaaaacttagtggacgaaaagtg 43517206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 362 - 434
Target Start/End: Complemental strand, 3769562 - 3769489
Alignment:
Q  362 tttgtaaagataaggggtcaaaaaacatatttttcttatgtt-ataggtcaaaagagcatatttccctaaacat 434  Q
    |||||||||||||| | ||||||| ||||||| || |||||| |  |||||||| |||||||||| ||||||||    
T  3769562 tttgtaaagataagagatcaaaaagcatatttctcatatgttaaggggtcaaaaaagcatatttctctaaacat 3769489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 470 - 519
Target Start/End: Original strand, 5111667 - 5111716
Alignment:
Q  470 aaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    ||||||||||| ||||||||||||| || | ||||||| |||||||||||    
T  5111667 aaaatcgcaactttttaaaacttaggggtcaaaaagtgtagtttagcctt 5111716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 11843226 - 11843177
Alignment:
Q  469 caaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    ||||||||||||||||| |||| ||| |||||| ||||| ||||||||||    
T  11843226 caaaatcgcaacattttgaaacatagggggcgagaagtgcagtttagcct 11843177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 470 - 519
Target Start/End: Original strand, 14624857 - 14624906
Alignment:
Q  470 aaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    |||||||||| ||||| ||||||||||| ||||||||| |||| ||||||    
T  14624857 aaaatcgcaaaattttgaaacttagaggacgaaaagtgcagttgagcctt 14624906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 21225626 - 21225577
Alignment:
Q  469 caaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    ||||||| ||||||||||||||||||  |||||||| || ||||||||||    
T  21225626 caaaatcacaacattttaaaacttaggaggcgaaaattgcagtttagcct 21225577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 464 - 517
Target Start/End: Original strand, 31494161 - 31494214
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcc 517  Q
    |||| ||||||||||||||||| |||| ||||| ||||||| || |||||||||    
T  31494161 ggggccaaaatcgcaacattttgaaacatagagtgcgaaaaatgcagtttagcc 31494214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 470 - 519
Target Start/End: Original strand, 42271589 - 42271638
Alignment:
Q  470 aaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    ||||| ||||||||||||||| ||| |||||||||||| | |||||||||    
T  42271589 aaaattgcaacattttaaaacatagggggcgaaaagtgcactttagcctt 42271638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 1e-64; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 217 - 518
Target Start/End: Complemental strand, 38716496 - 38716193
Alignment:
Q  217 ggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattgct 316  Q
    |||||||||||| ||||| |||| ||||||||||||| |||| |||||| |  |||||        | |||||| | ||| |||||||||  ||||||||    
T  38716496 ggctaaactgcacttttcacctcctatgtttcaaaatgttgcaattttgaccccctataaaaaaaatagcaattttggcccctttcatccaaaaattgct 38716397  T
Q  317 gagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaag 415  Q
    ||||||||||| | |||| ||||||||||||||||||| || || |||||||||||||||||||||||| ||||||| ||||||||||  ||||||||||    
T  38716396 gagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttctcttatgttaggaggtcaaaag 38716297  T
Q  416 agcatatttccctaaacataggatgccacttttgccannnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagttta 514  Q
    |||||||||||||||||||| |  | |||||||||||       |||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  38716296 agcatatttccctaaacatatggggtcacttttgccatttttttaatagggggtcaaaatcgcaacattttaaaacttagagggtgaaaagtgaagttta 38716197  T
Q  515 gcct 518  Q
    ||||    
T  38716196 gcct 38716193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 213 - 518
Target Start/End: Original strand, 30714271 - 30714579
Alignment:
Q  213 tttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaat 312  Q
    ||||||||||| |||| |||||||| | ||||||| ||||| |||||||||||||  ||||||       |||||||| | ||| |||||||||| ||||    
T  30714271 tttaggctaaagtgcacttttcgccccctatgttttaaaatgttgcgattttggccccctattaaaaaaatggcaattttggcccctttcatcccaaaat 30714370  T
Q  313 tgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtca 411  Q
    ||||||||||||||| |||||| ||||||||||||||||||| || || ||||||||||||| |||||||||| |||||||  |||||||||  ||||||    
T  30714371 tgctgagaagacgccacatgtcccaaaaaaggggccataatcacaactttttgtaaagataacgggtcaaaaagcatatttcccttatgttaggaggtca 30714470  T
Q  412 aaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtgga 509  Q
    |||||||||||||||| |||||||||  | |||||||||||        |||| |||| |||||| |||||||||||||| ||||||||||||||||| |    
T  30714471 aaagagcatatttcccgaaacatagggggtcacttttgccattttttttaatagggggccaaaattgcaacattttaaaatttagagggcgaaaagtgaa 30714570  T
Q  510 gtttagcct 518  Q
    |||||||||    
T  30714571 gtttagcct 30714579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 211 - 526
Target Start/End: Complemental strand, 11176217 - 11175898
Alignment:
Q  211 aatttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccga 309  Q
    ||||||||||||| |||| |||| ||||| ||||||||||||| ||||||||||| |  ||||||        |||||||| |   | |||||||||| |    
T  11176217 aatttaggctaaagtgcacttttggcctcctatgtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaattttgatccctttcatcccaa 11176118  T
Q  310 aattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-tagg 408  Q
    |||||||||||||||||| | |||| ||||||||||||||||||| || || |||||||||||||||||||||||| |||||||  |||||||||  |||    
T  11176117 aattgctgagaagacgccacgtgtcccaaaaaaggggccataatcacaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggagg 11176018  T
Q  409 tcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagt 506  Q
    |||||||||||||||||||||||||||||  | |||||||||||        |||| |||| ||||||||||||||||| ||||||||||||||||||||    
T  11176017 tcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagt 11175918  T
Q  507 ggagtttagccttgaattta 526  Q
    | ||||||||||| ||||||    
T  11175917 gaagtttagccttaaattta 11175898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 217 - 518
Target Start/End: Original strand, 9051028 - 9051332
Alignment:
Q  217 ggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaattgc 315  Q
    ||||||| ||||||||||||||| ||||||| ||||| |||||||||||    ||||||        |||||||| | ||| | |||||| | |||||||    
T  9051028 ggctaaagtgcatttttcgcctcctatgttttaaaatgttgcgattttgatcccctattaaaaaaaatggcaattttggcccccttcatctcaaaattgc 9051127  T
Q  316 tgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaa 414  Q
    |||||||||||| | |||| |||||||||| |||||||| || || |||||||||||||| ||||||||| |||||||  |||||||||  |||||||||    
T  9051128 tgagaagacgccccgtgtcccaaaaaaggg-ccataatcgcaactttttgtaaagataagaggtcaaaaagcatatttcccttatgttaggaggtcaaaa 9051226  T
Q  415 gagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtt 512  Q
    |||||||||||||||||||||||  | |||||||||||        |||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9051227 gagcatatttccctaaacatagggagtcacttttgccattttttttaatagggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtgaagtt 9051326  T
Q  513 tagcct 518  Q
    ||||||    
T  9051327 tagcct 9051332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 212 - 518
Target Start/End: Original strand, 18537824 - 18538133
Alignment:
Q  212 atttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaa 311  Q
    ||||||||||||||||| |||||| | | ||||||| ||||| |||| |||||||   ||||||       | |||||| | ||| |||||||||  |||    
T  18537824 atttaggctaaactgcacttttcgtcccctatgttttaaaatgttgcaattttggtcccctattaaaaaaatagcaattttggcccctttcatccaaaaa 18537923  T
Q  312 ttgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttat-aggtc 410  Q
    |||||||||||||||| | |||| ||||||||||||||||||  || || |||||||||||||||||||||||| |||||||  || ||||||| |||||    
T  18537924 ttgctgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaagcatatttccctaatgttatgaggtc 18538023  T
Q  411 aaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtgg 508  Q
    |||| ||||||||||||||||||||||  | |||||||||||        |||| |||| ||||||||||||||||| |||||||||||||||||||||     
T  18538024 aaaaaagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtga 18538123  T
Q  509 agtttagcct 518  Q
    ||||||||||    
T  18538124 agtttagcct 18538133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 217 - 518
Target Start/End: Complemental strand, 15735367 - 15735063
Alignment:
Q  217 ggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattgct 316  Q
    ||||||||| || |||||||| | ||||||| ||||| |||| |||||||   ||| ||       |||||||| | ||| |||||||||| |||||| |    
T  15735367 ggctaaactccacttttcgccccctatgttttaaaatgttgcaattttggtccccttttaaaaaaatggcaattttggcccctttcatcccaaaattgtt 15735268  T
Q  317 gagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaag 415  Q
    ||||||||||| | |||| ||||||||||||||||||| || || ||||||||||||||||||||||| ||||||||  |||||||||  ||||||||||    
T  15735267 gagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaatacatatttcccttatgttacgaggtcaaaag 15735168  T
Q  416 agcatatttccctaaacataggatgccacttttgcca-nnnnnnnaatagggg-tcaaaatcgcaacattttaaaacttagagggcgaaaagtggagttt 513  Q
    |||||||||||| |||||||||  | |||||||||||        ||||||||  ||||||||||||||||| ||||||||||||||||||||| |||||    
T  15735167 agcatatttcccaaaacatagggggtcacttttgccatttcttttaataggggaccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagttt 15735068  T
Q  514 agcct 518  Q
    |||||    
T  15735067 agcct 15735063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 202 - 520
Target Start/End: Original strand, 6763702 - 6764024
Alignment:
Q  202 gtttatttgaatttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctt 300  Q
    |||||||||  ||||||||||||||||||||| |||  |||||||| ||||| ||| ||||||||   ||||||        |||||||| | | |  ||    
T  6763702 gtttatttggttttaggctaaactgcattttttgccctttatgttttaaaatgttgtgattttggtcccctattaaaaaaaatggcaattttggtccatt 6763801  T
Q  301 tcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttat 400  Q
    | ||||| ||||||||||||||||||| | |||| ||||||||||||| ||||| |  || |||||||||||||||||||||||| |||||||| |||||    
T  6763802 ttatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccgtaatcgctactttttgtaaagataaggggtcaaaaagcatattttccttat 6763901  T
Q  401 gtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaatagggg-tcaaaatcgcaacattttaaaacttagagg 497  Q
    ||||  ||||||||||||||||||||||||||||||||  | |||||||||||        ||||||||  ||||||||||||||||| |||||||||||    
T  6763902 gttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaataggggaccaaaatcgcaacattttgaaacttagagg 6764001  T
Q  498 gcgaaaagtggagtttagccttg 520  Q
    ||||||| || ||||||||||||    
T  6764002 gcgaaaaatgaagtttagccttg 6764024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 217 - 514
Target Start/End: Complemental strand, 9787861 - 9787563
Alignment:
Q  217 ggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattgct 316  Q
    ||||||||| || |||||||| | |||||||||||||||||| ||||||||  ||||||       || ||||| | ||| |||||||||  ||||||||    
T  9787861 ggctaaactacacttttcgccccctatgtttcaaaatattgcaattttggccccctattaaaaaa-tgacaattttggcccctttcatccaaaaattgct 9787763  T
Q  317 gagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaag 415  Q
    ||||||||||| | |||| |||||||||||||||||||  | || |||||||||||||||||||||||| |||||||  |||||||||  ||||||||||    
T  9787762 gagaagacgccacgtgtcccaaaaaaggggccataatcgtaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagcaggtcaaaag 9787663  T
Q  416 agcatatttccctaaacataggatgccacttttgccannnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagttta 514  Q
    |||||||||||||||||||||   | |||||||||||       |||| ||||||||||| ||||||||||||||| ||| ||||||||| || ||||||    
T  9787662 agcatatttccctaaacatagtgggtcacttttgccatttttttaatagggggtcaaaattgcaacattttaaaacatagggggcgaaaaatgtagttta 9787563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 220 - 518
Target Start/End: Original strand, 25298804 - 25299105
Alignment:
Q  220 taaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaattgctga 318  Q
    |||| |||| |||||||| | ||||||| ||||| ||||||||||||| |||||||        | |||||| | ||| | |||||||| |||||| |||    
T  25298804 taaagtgcacttttcgccccctatgttttaaaatgttgcgattttggcctcctattaaaaaaaattgcaattttggcccccttcatcccaaaattgttga 25298903  T
Q  319 gaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtt-ataggtcaaaagag 417  Q
    ||||| ||| | |||| ||||||||||||||||||| || || |||||||||||||||| |||||||||||||||   ||||||| | ||||||||||||    
T  25298904 gaagatgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataagggatcaaaaaacatatttcctttatgttaagaggtcaaaagag 25299003  T
Q  418 catatttccctaaacataggatgccacttttgccannnnnnnaataggggtc-aaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagc 516  Q
    ||||||||||||||||||||  | |||||||||||       |||||||| | |||||||||||||||| |||||||||||||||||| || ||||||||    
T  25299004 catatttccctaaacatagggggtcacttttgccatttttttaatagggggctaaaatcgcaacattttgaaacttagagggcgaaaattgaagtttagc 25299103  T
Q  517 ct 518  Q
    ||    
T  25299104 ct 25299105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 214 - 518
Target Start/End: Complemental strand, 15701053 - 15700746
Alignment:
Q  214 ttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaatt 313  Q
    |||||||||| |||| |||||||| | ||||||||| ||| |||||||||||    ||||||       | |||||| | ||| |||||||||| |||||    
T  15701053 ttaggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttgatcccctatttaaaaaatagcaattttggcccctttcatcccaaaatt 15700954  T
Q  314 gctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaa 412  Q
    ||| |||||| ||| | |||| || |||||||| ||||||| || || ||||||||||||||||||||||||||||||||  |||||||||   ||||||    
T  15700953 gctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaa 15700854  T
Q  413 aagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaataggggt-caaaatcgcaacattttaaaacttagagggcgaaaagtggag 510  Q
    ||||||||||||||| |||||||||  | ||||| |||||        ||||||||| |||||||||||||||||||||||||  ||||||||||||||     
T  15700853 aagagcatatttcccgaaacatagggggtcacttgtgccattttttttaataggggtccaaaatcgcaacattttaaaacttaaggggcgaaaagtggac 15700754  T
Q  511 tttagcct 518  Q
    ||||||||    
T  15700753 tttagcct 15700746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 241 - 514
Target Start/End: Complemental strand, 2986966 - 2986689
Alignment:
Q  241 tatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaa 339  Q
    ||||||||||||| |||||||||||||  ||||||        |||||||| | ||| | |||||||| |||||||||||||||||||   ||||  |||    
T  2986966 tatgtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccccttcatcccaaaattgctgagaagacgccatgtgtccaaaa 2986867  T
Q  340 aaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaagagcatatttccctaaacatagga 438  Q
    ||||||||||||||| || || |||||||||||||||||||||||| |||||||  |||||||||  ||||||||||||||||||||||||||||||||     
T  2986866 aaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggg 2986767  T
Q  439 tgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagttta 514  Q
     | |||||||| ||        |||| |||| ||||||||||||||||| ||||||| ||||||||||||| ||||||    
T  2986766 ggtcacttttgtcattttttttaatagggggccaaaatcgcaacattttgaaacttaaagggcgaaaagtgaagttta 2986689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 339 - 518
Target Start/End: Complemental strand, 4588042 - 4587859
Alignment:
Q  339 aaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaagagcatatttccctaaacatagg 437  Q
    |||||||| ||||||| || || |||||||||||||||||| |||||||||||||  |||||||||   |||||||||||||||||||||||||||||||    
T  4588042 aaaaggggtcataatcgcaactttttgtaaagataaggggttaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagg 4587943  T
Q  438 atgccacttttgcca--nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
      | |||||||||||         |||| |||| ||||||||||||||||| |||||||| ||||||||||||| |||||||||    
T  4587942 gggtcacttttgccatttttttttaatagggggccaaaatcgcaacattttgaaacttagggggcgaaaagtggtgtttagcct 4587859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 219 - 518
Target Start/End: Complemental strand, 22191347 - 22191045
Alignment:
Q  219 ctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnnt-ggcaattctagcctctttcatcccgaaattgctg 317  Q
    ||||||| || |||||||||| ||||||||||||| |||| |||||||   ||||||         ||||||| | ||| |||||||||| |||||||||    
T  22191347 ctaaactacacttttcgcctcctatgtttcaaaatgttgcaattttggtcccctattaaaaaaaaaggcaattttggcccctttcatcccaaaattgctg 22191248  T
Q  318 agaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttat-aggtcaaaaga 416  Q
    ||||| |||| | |||| |||||||||| | ||||||  | || |||||||||||||||||||||||  |||||||  |||||||||  | |||||||||    
T  22191247 agaaggcgccacgtgtcccaaaaaagggtc-ataatcgtaactttttgtaaagataaggggtcaaaaggcatatttcccttatgttaggaagtcaaaaga 22191149  T
Q  417 gcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagttta 514  Q
    |||||||||||||||||||||  | |||||||||||         ||| |||| |||||| ||||||||||||||| ||| || ||||||||| ||||||    
T  22191148 gcatatttccctaaacatagggggtcacttttgccattttttttgatagggggccaaaattgcaacattttaaaacataggggacgaaaagtgtagttta 22191049  T
Q  515 gcct 518  Q
    ||||    
T  22191048 gcct 22191045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 309 - 434
Target Start/End: Original strand, 22387160 - 22387287
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaagggg-ccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-ta 406  Q
    ||||||||||||||||||| | |||| ||||||||||| |||||||| || ||||||||| ||||||||||||||||||||||||| || |||||||       
T  22387160 aaattgctgagaagacgccacttgtcccaaaaaagggggccataatcacaactctttgtatagataaggggtcaaaaaacatatttctcatatgttaggg 22387259  T
Q  407 ggtcaaaagagcatatttccctaaacat 434  Q
    ||||||||||||||||||| ||||||||    
T  22387260 ggtcaaaagagcatatttcactaaacat 22387287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 212 - 421
Target Start/End: Complemental strand, 17368523 - 17368314
Alignment:
Q  212 atttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaa 311  Q
    |||| ||||||||  || |||||||| | ||||||||||||| |||| ||||||||  ||||||       | |||||| | ||| |||||||||  |||    
T  17368523 attttggctaaacaacacttttcgccccctatgtttcaaaatgttgcaattttggcc-cctattaaaaaaatagcaattttggcccctttcatccaaaaa 17368425  T
Q  312 ttgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtc 410  Q
     || |||||||||||| | |||| ||||||||||||||||||  || || |||||||||||||||||||||||| |||||||  |||||||||  |||||    
T  17368424 atgttgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtc 17368325  T
Q  411 aaaagagcata 421  Q
    |||||||||||    
T  17368324 aaaagagcata 17368314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 299 - 504
Target Start/End: Complemental strand, 36464493 - 36464289
Alignment:
Q  299 tttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttttct 397  Q
    |||| |||| ||||||||||||||| | | | |||||||||||||||||||| ||| || || ||||  ||||||||| ||||||| |  ||||||  ||    
T  36464493 tttcgtcccaaaattgctgagaagatgtcacgtgtctcaaaaaaggggccat-atcgcaactttttgagaagataaggagtcaaaagattatatttccct 36464395  T
Q  398 tatgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaataggggtcaaaatcgcaacattttaaaacttagag 496  Q
    |||||||   |||||||||| ||||||||||||||||| ||  | |||||||||||       ||||||||||||||||||||||||||||||||||  |    
T  36464394 tatgttagggggtcaaaagatcatatttccctaaacatggg--gtcacttttgccattttttaaataggggtcaaaatcgcaacattttaaaacttaagg 36464297  T
Q  497 ggcgaaaa 504  Q
    ||||||||    
T  36464296 ggcgaaaa 36464289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 299 - 431
Target Start/End: Original strand, 4104907 - 4105040
Alignment:
Q  299 tttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttttct 397  Q
    |||| |||| ||||||||||||||||||| | |||  | ||||||||| ||||||| || || |||||||| |||||| ||||||| | ||||||   ||    
T  4104907 tttcgtcccaaaattgctgagaagacgccacgtgttcctaaaaaggggtcataatcgcaactttttgtaaatataaggtgtcaaaagagcatattcccct 4105006  T
Q  398 tatgttataggtcaaaagagcatatttccctaaa 431  Q
    ||||||| |||||||||||  |||||||||||||    
T  4105007 tatgttagaggtcaaaagaatatatttccctaaa 4105040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 298 - 518
Target Start/End: Complemental strand, 28365732 - 28365511
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttc 396  Q
    ||||| |||| |||||||||||||||||||    ||| ||||||| ||| ||||||| || || ||||  |||||||||||| |||| | |||||||  |    
T  28365732 ctttcgtcccaaaattgctgagaagacgccatgcgtcccaaaaaaagggtcataatcgcaactttttgagaagataaggggttaaaagatcatatttccc 28365633  T
Q  397 ttatgttataggtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaataggggtcaaaatcgcaacattttaaaacttaga 495  Q
    | ||||||  ||||||| ||||||||||||||||| |||||  | |||||||| ||         |||||||||||||||||||| |||||||| |||      
T  28365632 tcatgttaggggtcaaacgagcatatttccctaaatatagg-ggtcacttttgtcattttttttcataggggtcaaaatcgcaactttttaaaatttaag 28365534  T
Q  496 gggcgaaaagtggagtttagcct 518  Q
    ||| |||||||| | ||||||||    
T  28365533 gggtgaaaagtgcattttagcct 28365511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 312 - 434
Target Start/End: Complemental strand, 2190741 - 2190617
Alignment:
Q  312 ttgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttcttatgttatagg-t 409  Q
    ||||||||||| |||  |||||| ||||| | ||| ||||| | || || ||||||||||||||||| ||||  | |||||||| |||| |||| ||| |    
T  2190741 ttgctgagaagccgcaacatgtcccaaaatatgggtcataaccgcaactttttgtaaagataaggggccaaacgagcatattttccttaagttagagggt 2190642  T
Q  410 caaaagagcatatttccctaaacat 434  Q
    |||||||||||||||||||||||||    
T  2190641 caaaagagcatatttccctaaacat 2190617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 312 - 452
Target Start/End: Complemental strand, 331921 - 331779
Alignment:
Q  312 ttgctgagaagacgccgcatgtctcaaaaa-aggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttcttatgttatagg- 408  Q
    |||| |||||| |||| ||||| ||||||| ||||| ||||||| || || |||| |||||||| || |||||||| |||||||  |||| |||| |||     
T  331921 ttgccgagaagccgccacatgt-tcaaaaataggggtcataatcgcaactttttgcaaagataatggatcaaaaaagcatatttcccttaagttagaggg 331823  T
Q  409 tcaaaagagcatatttccctaaacataggatgccacttttgcca 452  Q
    |||||||||||||||||||||||||| | | | |||||||||||    
T  331822 tcaaaagagcatatttccctaaacatggaaggtcacttttgcca 331779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 43301656 - 43301707
Alignment:
Q  216 aggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggc 267  Q
    ||||||||||||||||||||||||||| ||||| |||| |||||||||||||    
T  43301656 aggctaaactgcatttttcgcctcttaagtttcgaaatgttgcgattttggc 43301707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 464 - 518
Target Start/End: Complemental strand, 25884231 - 25884177
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    |||| |||||||||||||||||||||||||| |||||||| ||| ||||||||||    
T  25884231 ggggccaaaatcgcaacattttaaaacttagggggcgaaatgtgcagtttagcct 25884177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 469 - 517
Target Start/End: Original strand, 15735319 - 15735367
Alignment:
Q  469 caaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcc 517  Q
    |||||| ||||||||||||||| ||| ||||||||||||||||||||||    
T  15735319 caaaattgcaacattttaaaacatagggggcgaaaagtggagtttagcc 15735367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 468 - 518
Target Start/End: Complemental strand, 21773382 - 21773332
Alignment:
Q  468 tcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    ||||||||||||||||||||||||||| ||||  |||||| ||||||||||    
T  21773382 tcaaaatcgcaacattttaaaacttagggggcagaaagtgcagtttagcct 21773332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 26829210 - 26829308
Alignment:
Q  337 aaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttcttatgttataggtcaaaagagcatatttccctaaacat 434  Q
    ||||| |||||||||||| || || ||||  | ||||||||||||||| | |||||||  |||||||||  |||| ||||||||||||||| |||||||    
T  26829210 aaaaagggggccataatcacaactttttgagatgataaggggtcaaaagatcatatttcccttatgttaggggtccaaagagcatatttccttaaacat 26829308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 464 - 518
Target Start/End: Complemental strand, 30714328 - 30714274
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    |||| |||||||||||||||||||||| ||| |||||||||||| | ||||||||    
T  30714328 ggggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagcct 30714274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 32677814 - 32677867
Alignment:
Q  215 taggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggct 268  Q
    ||||||||| ||||||||||||||| || |||| ||||| ||||||||||||||    
T  32677814 taggctaaagtgcatttttcgcctcctaagttttaaaatgttgcgattttggct 32677867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 312 - 434
Target Start/End: Complemental strand, 14743526 - 14743402
Alignment:
Q  312 ttgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttttcttatgttata-ggt 409  Q
    ||||||||||| | || | |||| ||||| |||||| |||||| ||  | |||| ||| |||||||| ||||| | ||||||| ||||| |||||| |||    
T  14743526 ttgctgagaagccaccacgtgtcccaaaataggggctataatcgcaaatttttgcaaaaataaggggccaaaagagcatatttctcttaagttatagggt 14743427  T
Q  410 caaaagagcatatttccctaaacat 434  Q
    ||||||| |||||||||| ||||||    
T  14743426 caaaagatcatatttcccaaaacat 14743402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 463 - 514
Target Start/End: Original strand, 36464521 - 36464572
Alignment:
Q  463 aggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagttta 514  Q
    |||| |||||||||||||||||| ||||||||  ||||||||||| ||||||    
T  36464521 agggatcaaaatcgcaacattttgaaacttaggaggcgaaaagtgcagttta 36464572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 362 - 431
Target Start/End: Complemental strand, 1020548 - 1020478
Alignment:
Q  362 tttgtaaagataaggggtcaaaaaacatatttttcttatgttatagg-tcaaaagagcatatttccctaaa 431  Q
    |||| |||||||| ||| |||||| ||||||| |||||||||| ||| |||||| ||||||||||| ||||    
T  1020548 tttgaaaagataaagggacaaaaatcatatttctcttatgttagagggtcaaaatagcatatttccataaa 1020478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 469 - 507
Target Start/End: Complemental strand, 25298849 - 25298811
Alignment:
Q  469 caaaatcgcaacattttaaaacttagagggcgaaaagtg 507  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  25298849 caaaatcgcaacattttaaaacatagggggcgaaaagtg 25298811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 215 - 265
Target Start/End: Complemental strand, 36464577 - 36464527
Alignment:
Q  215 taggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttg 265  Q
    |||| ||||||||| |||||||||| || |||||||||| |||||||||||    
T  36464577 taggttaaactgcacttttcgcctcctaagtttcaaaatgttgcgattttg 36464527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 517
Target Start/End: Original strand, 17368461 - 17368518
Alignment:
Q  460 aataggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcc 517  Q
    |||||||| |||||| |||||||||| |||| ||| ||||||||||||  ||||||||    
T  17368461 aataggggccaaaattgcaacattttgaaacatagggggcgaaaagtgttgtttagcc 17368518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 18537877 - 18537828
Alignment:
Q  469 caaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    |||||| ||||||||||||||| ||| || ||||||||| ||||||||||    
T  18537877 caaaattgcaacattttaaaacataggggacgaaaagtgcagtttagcct 18537828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 32677864 - 32677815
Alignment:
Q  469 caaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    ||||||||||||||||||||||||||  |||||||| || | ||||||||    
T  32677864 caaaatcgcaacattttaaaacttaggaggcgaaaaatgcactttagcct 32677815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 124; Significance: 2e-63; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 217 - 517
Target Start/End: Complemental strand, 19585 - 19285
Alignment:
Q  217 ggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattgct 316  Q
    ||||||||||||||||||||| |||| |||||||| | || ||||||||||  ||||||       |||||||| | |||  ||||||||  ||||||||    
T  19585 ggctaaactgcatttttcgccccttaagtttcaaactgtttcgattttggccccctattaaaaaaatggcaattttggcccatttcatccaaaaattgct 19486  T
Q  317 gagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttataggtcaaaaga 416  Q
    ||||||||||| | |||| ||||||||||||||||||| || || |||||||||||||||||||||||| |||||||  |||||||||  ||||||||||    
T  19485 gagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggggtcaaaaga 19386  T
Q  417 gcatatttccctaaacataggatgccacttttgccannnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttag 515  Q
    |||||||||||||||||||||  | |||||||||||       |||| |||||||||||||||||||||| ||||||||  |||||||||| ||||||||    
T  19385 gcatatttccctaaacatagg-ggtcacttttgccatttttttaatagggggtcaaaatcgcaacattttgaaacttaggaggcgaaaagtagagtttag 19287  T
Q  516 cc 517  Q
    ||    
T  19286 cc 19285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 216 - 519
Target Start/End: Complemental strand, 62123 - 61812
Alignment:
Q  216 aggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn---tggcaattctagcctctttcatcccgaaat 312  Q
    ||||||||||||||||||| || | ||||||||||||| |||| ||||||||  | ||||          | |||||| | ||| |||||||||  ||||    
T  62123 aggctaaactgcatttttcaccccctatgtttcaaaatgttgcaattttggccccgtattaaaaaaaaaatagcaattttggcccctttcatccaaaaat 62024  T
Q  313 tgctgagaagacgccgcatgtctcaaaaaa--ggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggt 409  Q
    || |||||||||||| | |||| |||||||  |||||||||||  || || |||||||||||||||||||||||| |||||||  |||||||||  | ||    
T  62023 tgttgagaagacgccacgtgtcccaaaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggatgt 61924  T
Q  410 caaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtg 507  Q
    ||||||||||||||||||||||||||||  | |||||||||||        |||| |||| ||||||||||||||||| ||||||||| |||||||||||    
T  61923 caaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttagaaggcgaaaagtg 61824  T
Q  508 gagtttagcctt 519  Q
     |||||||||||    
T  61823 aagtttagcctt 61812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 122; Significance: 3e-62; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 214 - 517
Target Start/End: Complemental strand, 13081201 - 13080894
Alignment:
Q  214 ttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaat 312  Q
    |||||||||| |||  |||||||||| ||||||||||||| |||||||||||||  ||||||        |||||||| | ||| | |||||||| ||||    
T  13081201 ttaggctaaagtgcgcttttcgcctcctatgtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccccttcatcccaaaat 13081102  T
Q  313 tgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttat-aggtca 411  Q
    |||||||||||| || |||||| ||||||||||||||||||| || || |||||||||||||||||||||||| |||||||  |||||||||| ||||||    
T  13081101 tgctgagaagactccacatgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttatgaggtca 13081002  T
Q  412 aaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaataggg-gtcaaaatcgcaacattttaaaacttagagggcgaaaagtgga 509  Q
    |||||||||||||||||||| |||||  | |||||||||||        ||||||| | ||||||||||||||||| ||||||||||||||||||||| |    
T  13081001 aaagagcatatttccctaaatatagggggtcacttttgccattttttttaatagggagccaaaatcgcaacattttgaaacttagagggcgaaaagtgaa 13080902  T
Q  510 gtttagcc 517  Q
    ||||||||    
T  13080901 gtttagcc 13080894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 215 - 518
Target Start/End: Complemental strand, 25179881 - 25179577
Alignment:
Q  215 taggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattg 314  Q
    ||||||||| |||| |||||||| | ||||||||||||| ||||||| |||||  | ||||       |||||||| | ||| | |||||||| ||||||    
T  25179881 taggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgatattggccccttattaaaaaaatggcaattatggcccccttcatcccaaaattg 25179782  T
Q  315 ctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaa 413  Q
    ||||||||||||||  |||| ||||||||||||||||||| || || |||||||||||||||||||||||||||||||| ||||| ||||  ||||||||    
T  25179781 ctgagaagacgccg--tgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacatatttctcttacgttaggaggtcaaa 25179684  T
Q  414 agagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagt 511  Q
    ||||||||||||||||||||||||  | ||||||||| |        |||| |||| ||||||||||||||||||||||||||||||||||||||| |||    
T  25179683 agagcatatttccctaaacatagggggtcacttttgctattttttttaatagggggccaaaatcgcaacattttaaaacttagagggcgaaaagtgaagt 25179584  T
Q  512 ttagcct 518  Q
    |||||||    
T  25179583 ttagcct 25179577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 215 - 518
Target Start/End: Original strand, 26628023 - 26628330
Alignment:
Q  215 taggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaatt 313  Q
    ||||||||||| || |||||||| | ||||||||||||| |||| ||||||||  ||||||        |||||||| | ||| |||||||||| |||||    
T  26628023 taggctaaactacacttttcgccccctatgtttcaaaatgttgcaattttggccccctattaaaaaaaatggcaattttggcccctttcatcccaaaatt 26628122  T
Q  314 gctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaa 412  Q
    |||||||||||||| | |||| ||||||||||||||||||| || || |||||||||||||||||||||||| |||||||  |||||||||  |||||||    
T  26628123 gctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaa 26628222  T
Q  413 aagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggag 510  Q
    |||||||||||||||||||||||||  | |||||||||||        |||| |||| ||||||||||||||||| |||||||||||||||||| || ||    
T  26628223 aagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaaatgaag 26628322  T
Q  511 tttagcct 518  Q
    ||||||||    
T  26628323 tttagcct 26628330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 283 - 519
Target Start/End: Original strand, 48907359 - 48907597
Alignment:
Q  283 tggcaattctagcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaa 382  Q
    |||||||| | ||| |||||||||| ||||||||||||||||||| | |||| ||||||||||||||||||| || || ||| |||||||||||||||||    
T  48907359 tggcaattttggcccctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttttaaagataaggggtcaa 48907458  T
Q  383 aaaacatatttttcttatgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaata-ggggtcaaaatcgcaac 480  Q
    ||| |||||||  |||||||||  ||||||||||||||||||||||||||||||||  | |||||||||||       |||| |||| ||||||||||||    
T  48907459 aaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttaatagggggccaaaatcgcaac 48907558  T
Q  481 attttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  48907559 attttgaaacttagagggcgaaaagtgaagtttagcctt 48907597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 300 - 524
Target Start/End: Complemental strand, 8542830 - 8542603
Alignment:
Q  300 ttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttctta 399  Q
    |||||||| ||||||||||||||||||| | |||| ||||||||||||||||||  || || |||||||||||||||||||||||| |||||||  ||||    
T  8542830 ttcatcccaaaattgctgagaagacgccacgtgtcacaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaagcatatttccctta 8542731  T
Q  400 tgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagag 496  Q
    |||||  ||||||||||||||||||||||||||||||||  | |||||||||||        |||| ||||||||||| |||||||||| ||||||||||    
T  8542730 tgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggtcaaaattgcaacattttgaaacttagag 8542631  T
Q  497 ggcgaaaagtggagtttagccttgaatt 524  Q
    | ||||||||| ||||||||||| ||||    
T  8542630 gacgaaaagtgaagtttagcctttaatt 8542603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 216 - 517
Target Start/End: Original strand, 3328812 - 3329117
Alignment:
Q  216 aggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaattg 314  Q
    ||||||||||||| |||||||| | ||||||||||||| || | ||||||||  ||||||        | |||||| | ||| |||||||||  ||||||    
T  3328812 aggctaaactgcacttttcgccccctatgtttcaaaatgttacaattttggccccctattaaaaaaaatagcaattttggcccctttcatccaaaaattg 3328911  T
Q  315 ctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaa 413  Q
    ||||||||||||| | |||| ||||||||||||||||||| || || |||||||||||||||||||||||  |||||||  |||||||||  ||||||||    
T  3328912 ctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaggcatatttcccttatgttaggaggtcaaa 3329011  T
Q  414 agagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagt 511  Q
    ||||||||||||||||||| ||||  | ||||||| |||        |||| |||| ||||||||||||||||| ||||||||||||||||||||| |||    
T  3329012 agagcatatttccctaaacttagggggtcactttttccattttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagt 3329111  T
Q  512 ttagcc 517  Q
    ||||||    
T  3329112 ttagcc 3329117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 217 - 517
Target Start/End: Original strand, 8338940 - 8339244
Alignment:
Q  217 ggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaattgc 315  Q
    ||||||| |||| |||||||| | ||||||||||||| ||||||||||| |  ||||||        |||||||| | ||| | |||||||| |||||||    
T  8338940 ggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaattttggcccccttcatcccaaaattgc 8339039  T
Q  316 tgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaa 414  Q
    |||||||||||| | |||| |||||||| |||||||||| || || |||||||||||||||||||||||| ||||||| | ||||||||  |||||||||    
T  8339040 tgagaagacgccacgtgtcccaaaaaagaggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttctattatgttaggaggtcaaaa 8339139  T
Q  415 gagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtt 512  Q
     |||||||||||||||||||| |  | |||||||||||        |||| |||| |||||| |||||||||| ||||||||||||||||||||| ||||    
T  8339140 aagcatatttccctaaacataaggggtcacttttgccattttttttaatagggggccaaaattgcaacattttgaaacttagagggcgaaaagtgaagtt 8339239  T
Q  513 tagcc 517  Q
    |||||    
T  8339240 tagcc 8339244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 215 - 517
Target Start/End: Original strand, 22500594 - 22500898
Alignment:
Q  215 taggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattg 314  Q
    |||||||||||||| |||||| | | |||||||||||||||||| ||||||||  ||||||       |  ||||| ||||| |||||||||  |||||     
T  22500594 taggctaaactgcacttttcggcccctatgtttcaaaatattgcaattttggccccctattaaaaaaatatcaattttagcccctttcatccaaaaattt 22500693  T
Q  315 ctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaa 413  Q
    ||||||||||||| | ||||  ||||||||| |||||||| || || |||||||| ||||||| ||||||| |||||||  |||||||||  ||||||||    
T  22500694 ctgagaagacgccacgtgtccaaaaaaagggaccataatcgcaactttttgtaaatataagggatcaaaaagcatatttcccttatgttaggaggtcaaa 22500793  T
Q  414 agagcatatttccctaaacataggatgccacttttgccannnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtt 512  Q
    ||||||||||| ||||||||||||  | |||||||||||       |||| ||||||||||| |||||||||||||| ||| |||| |||||||| ||||    
T  22500794 agagcatattttcctaaacatagggggtcacttttgccatttttttaatagggggtcaaaattgcaacattttaaaatttaaagggtgaaaagtgaagtt 22500893  T
Q  513 tagcc 517  Q
    |||||    
T  22500894 tagcc 22500898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 217 - 518
Target Start/End: Original strand, 27852753 - 27853056
Alignment:
Q  217 ggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattgct 316  Q
    ||||||| |||| |||||||| | ||||||||||||| |||| ||||| ||  ||||||       |||||||| | ||| | |||| ||| |||||| |    
T  27852753 ggctaaagtgcacttttcgccccctatgtttcaaaatgttgcaattttagccccctattaaaaaaatggcaattttggcccccttcagcccaaaattgtt 27852852  T
Q  317 gagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaag 415  Q
    ||||||||||| | |||| ||||| ||||||||||||| || || |||||||||||||||||||||||| |||||||  |||||||||  ||||||||||    
T  27852853 gagaagacgccacgtgtcccaaaa-aggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaag 27852951  T
Q  416 agcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagttt 513  Q
    ||||||||||||||||||||||  | |||||||||||        |||| |||| |||||| |||||||||| ||||||||||||||||||||| |||||    
T  27852952 agcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaattgcaacattttgaaacttagagggcgaaaagtgaagttt 27853051  T
Q  514 agcct 518  Q
    |||||    
T  27853052 agcct 27853056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 309 - 518
Target Start/End: Original strand, 30155238 - 30155448
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-tag 407  Q
    ||||||||| |||||||||   |||| ||||||||||||||||||| || || ||||||||||||||||||||||||||||||||  |||||||||  ||    
T  30155238 aaattgctgcgaagacgccatgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggag 30155337  T
Q  408 gtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaatagggg-tcaaaatcgcaacattttaaaacttagagggcgaaaagt 506  Q
    ||||||||||||||||||||||||||||||    |||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||| |    
T  30155338 gtcaaaagagcatatttccctaaacataggggatcacttttgcca-ttttttaataggggatcaaaatcgcaacattttaaaacttagagggcgaaaaat 30155436  T
Q  507 ggagtttagcct 518  Q
      ||||||||||    
T  30155437 aaagtttagcct 30155448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 285 - 519
Target Start/End: Complemental strand, 10743642 - 10743407
Alignment:
Q  285 gcaattctagcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa 384  Q
    |||||| | ||| |||||||||| |||||||| | |||| ||| | || | || |||||||| ||||||| || || |||||||||||||||||||||||    
T  10743642 gcaattttggcccctttcatcccaaaattgctcaaaagatgccacgtgacccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa 10743543  T
Q  385 aacatatttttcttatgttataggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaata-ggggtcaaaatcgcaacatt 483  Q
    |||||||||  |||||||||  ||| |||||||||||||||||||||||||||  | |||||||| ||       |||| |||| |||||||||||||||    
T  10743542 aacatatttcccttatgttaggggttaaaagagcatatttccctaaacatagggagtcacttttgtcatttttttaatagggggccaaaatcgcaacatt 10743443  T
Q  484 ttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    ||||||||||| |||||||||| |||||||||||||    
T  10743442 ttaaaacttagggggcgaaaagaggagtttagcctt 10743407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 283 - 514
Target Start/End: Complemental strand, 4522191 - 4521957
Alignment:
Q  283 tggcaattctagcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaa 382  Q
    |||||||| | ||| |||||||||  ||||||||||||||||||| | |||| |||||||||||| |||||| || || |||||||||||||||||||||    
T  4522191 tggcaattttggcccctttcatcctaaaattgctgagaagacgccacgtgtcccaaaaaaggggcaataatcgcaactttttgtaaagataaggggtcaa 4522092  T
Q  383 aaaacatatttttcttatgtt-ataggtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaa 479  Q
    ||| |||||||  |||||||| | |||||||||||||||||||||||||||||| |  | ||||||||| |        |||| |||| |||||||||||    
T  4522091 aaagcatatttcccttatgttaagaggtcaaaagagcatatttccctaaacatatggggtcacttttgctactttttttaatagggggccaaaatcgcaa 4521992  T
Q  480 cattttaaaacttagagggcgaaaagtggagttta 514  Q
    |||||||||||||| ||||||||||||| ||||||    
T  4521991 cattttaaaacttatagggcgaaaagtgaagttta 4521957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 215 - 514
Target Start/End: Original strand, 22447738 - 22448045
Alignment:
Q  215 taggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaatt 313  Q
    |||||||||||||| |||||||| | ||||||||||||| |||| ||||||||  ||||||        | |||||| | | | |||||||||  |||||    
T  22447738 taggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggccccctattaaaaaaaatagcaattttggaccctttcatccaaaaatt 22447837  T
Q  314 gctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagata----aggggtcaaaaaacatatttttcttatgttat-agg 408  Q
     ||||||||||||| | | ||  |||||||||||||||||| || || ||||||||||||    |||||||||||| |||||||  |||||||||  |||    
T  22447838 tctgagaagacgccacgtatccaaaaaaaggggccataatcgcaactttttgtaaagatatataaggggtcaaaaagcatatttcccttatgttaggagg 22447937  T
Q  409 tcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagt 506  Q
    |||||||||||||||||||||||||||||| | |||||||||||        |||| |||| |||||| |||||||||||||||||||||||||||||||    
T  22447938 tcaaaagagcatatttccctaaacataggaggtcacttttgccatattttttaatagggggccaaaattgcaacattttaaaacttagagggcgaaaagt 22448037  T
Q  507 ggagttta 514  Q
    | ||||||    
T  22448038 gcagttta 22448045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 293 - 519
Target Start/End: Complemental strand, 3781105 - 3780881
Alignment:
Q  293 agcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatt 392  Q
    ||||| ||||||||  |||||||||||||||| || | |||| ||||||||||| |||| || || || ||||||||||||| |||||||||| ||||||    
T  3781105 agcctttttcatcctaaaattgctgagaagacaccacgtgtcccaaaaaaggggtcatattcgcaactttttgtaaagataaagggtcaaaaagcatatt 3781006  T
Q  393 tttcttatgttataggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaataggggtcaaaatcgcaacattttaaaactt 492  Q
    |  |||||||||  |||||||||||||||||||||||||||| ||  | |||||||||||       |||||||||||||||||||||||||| ||||||    
T  3781005 tcccttatgttaggggtcaaaagagcatatttccctaaacatggg--gtcacttttgccatttttttaataggggtcaaaatcgcaacattttgaaactt 3780908  T
Q  493 agagggcgaaaagtggagtttagcctt 519  Q
    || | || |||| || | |||||||||    
T  3780907 agggagcaaaaaatgcattttagcctt 3780881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 215 - 513
Target Start/End: Original strand, 25022662 - 25022960
Alignment:
Q  215 taggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattg 314  Q
    ||||||||| |||| |||| ||| | ||||||||| |||||||||||||||||  ||| ||       | |||||| | ||| |||||||||| ||||||    
T  25022662 taggctaaagtgcactttttgccccatatgtttcataatattgcgattttggccccctgttaaaaaaatagcaattttggcccctttcatcccaaaattg 25022761  T
Q  315 ctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttat-aggtcaaa 413  Q
    || |||||| ||| | |||| || |||||||| ||||||| || || |||||||||||||||| ||||||||||||| |  ||||||||||  |||||||    
T  25022762 ctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataagggttcaaaaaacatatatcccttatgttatggggtcaaa 25022861  T
Q  414 agagcatatttccctaaacataggatgccacttttgccannnnnnnaataggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagttt 513  Q
    ||||||||||||||||||||||||  | |||||||||||        | | ||| |||||||| |||||||| |||||||| ||||||||||||| ||||    
T  25022862 agagcatatttccctaaacatagggggtcacttttgccatttttaata-aagggccaaaatcgtaacattttgaaacttagtgggcgaaaagtggtgttt 25022960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 217 - 435
Target Start/End: Original strand, 28154882 - 28155102
Alignment:
Q  217 ggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaattgc 315  Q
    ||||||||| || |||||||| | ||||||||||||| |||| ||||||||  ||||||        |||||||| | ||| |||||||||  |||||||    
T  28154882 ggctaaactacacttttcgccccctatgtttcaaaatgttgcaattttggccccctattaaaaaaaatggcaattttggcccctttcatccaaaaattgc 28154981  T
Q  316 tgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaa 414  Q
    |||||||||||| | |||| ||||||| ||||||||||| || || |||||||||||||| ||||||||| |||||||  |||||||||  |||||||||    
T  28154982 tgagaagacgccacgtgtcccaaaaaaagggccataatcgcaactttttgtaaagataagaggtcaaaaagcatatttcccttatgttaggaggtcaaaa 28155081  T
Q  415 gagcatatttccctaaacata 435  Q
    |||||||||||||||||||||    
T  28155082 gagcatatttccctaaacata 28155102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 336 - 518
Target Start/End: Original strand, 26633479 - 26633660
Alignment:
Q  336 caaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttataggtcaaaagagcatatttccctaaacata 435  Q
    ||||||||||||||||||| || || |||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| ||     
T  26633479 caaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacatatttctcttatgttaggggtcaaaagagcatatttccctaaagatg 26633578  T
Q  436 ggatgccacttttgccannnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    ||  | || ||||||||       |||| |||||||||||||||||||||  |||||||| ||| ||||||||  |||||||||    
T  26633579 gg--gtcatttttgccatttttttaatagggggtcaaaatcgcaacatttagaaacttagggggtgaaaagtgccgtttagcct 26633660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 298 - 452
Target Start/End: Original strand, 23428701 - 23428856
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttct 397  Q
    |||||||||| |||||||| |||||| ||| | |||| || |||||||| ||||||| || || ||||||||||||||||||||||||||||||||  ||    
T  23428701 ctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttccct 23428800  T
Q  398 tatgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgcca 452  Q
    |||||||   |||||||||||||||||||||||||||||||  | |||||||||||    
T  23428801 tatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 23428856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 214 - 436
Target Start/End: Original strand, 28173726 - 28173950
Alignment:
Q  214 ttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaat 312  Q
    |||||||||| |||| |||||||| | ||||||||| ||| |||||||||||||  ||||||        | |||||| | ||| |||||||||| ||||    
T  28173726 ttaggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttggccccctattaaaaaaagtagcaattttggcccctttcatcccaaaat 28173825  T
Q  313 tgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtca 411  Q
    ||||  ||||| ||| | |||| || |||||||| ||||||| || || ||||||||||||||||||||||||||||||||  |||||||||   |||||    
T  28173826 tgctcggaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtca 28173925  T
Q  412 aaagagcatatttccctaaacatag 436  Q
    |||||||||||||||||||||||||    
T  28173926 aaagagcatatttccctaaacatag 28173950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 285 - 517
Target Start/End: Original strand, 46673116 - 46673350
Alignment:
Q  285 gcaattctagcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctcttt-gtaaagataaggggtcaaa 383  Q
    |||||| | ||| |||||||||| |||||||| |||||| ||| | ||||  | |||||||| ||||||| || || ||| |||||||||||||||||||    
T  46673116 gcaattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcctagaaaaggggtcataatcgcaacttttttgtaaagataaggggtcaaa 46673215  T
Q  384 aaacatatttttcttatgttatag-gtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaata-ggggtcaaaatcgcaaca 481  Q
    || |||||||  |||||||||  | ||||||||||||||||||||||||||||||    |||||||||||       |||| ||||||||||||||||||    
T  46673216 aa-catatttcccttatgttagggagtcaaaagagcatatttccctaaacataggggatcacttttgccatttttttaatagggggtcaaaatcgcaaca 46673314  T
Q  482 ttttaaaacttagagggcgaaaagtggagtttagcc 517  Q
    ||| ||||||||  |||||||||||||| |||||||    
T  46673315 tttgaaaacttaaggggcgaaaagtggactttagcc 46673350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 213 - 393
Target Start/End: Original strand, 32960641 - 32960819
Alignment:
Q  213 tttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaat 312  Q
    ||||||||||||||||||||||||| | ||||||||||||| |||| ||||||||  ||||||       |||||||| | ||| |||||||||| ||||    
T  32960641 tttaggctaaactgcatttttcgccccctatgtttcaaaatgttgcaattttggcc-cctattaaaaaaatggcaattttggcccctttcatcccaaaat 32960739  T
Q  313 tgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatattt 393  Q
    | ||||||||||||| | |||| ||||||| || |||||||| || || |||||||||||||||||||||||| |||||||    
T  32960740 tactgagaagacgccacgtgtcccaaaaaaagg-ccataatcgcaactttttgtaaagataaggggtcaaaaagcatattt 32960819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 213 - 437
Target Start/End: Original strand, 34878525 - 34878751
Alignment:
Q  213 tttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaa 311  Q
    |||||||||||||||| || ||||| | ||||||||||||| |||||||||||||  ||||||        |||||||| |  ||  ||||||| | |||    
T  34878525 tttaggctaaactgcacttctcgccccctatgtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaattttgacccatttcatctcaaaa 34878624  T
Q  312 ttgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtc 410  Q
    |||||||||||||||| | |||| ||||||||| ||||||||   | || |||||||||||||||| ||||||| |||||||  ||||| |||   ||||    
T  34878625 ttgctgagaagacgccacgtgtcccaaaaaaggtgccataattgaaactttttgtaaagataagggatcaaaaagcatatttcccttatattagggggtc 34878724  T
Q  411 aaaagagcatatttccctaaacatagg 437  Q
    |||||||||||||||||||||| ||||    
T  34878725 aaaagagcatatttccctaaacttagg 34878751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 220 - 393
Target Start/End: Complemental strand, 6927770 - 6927597
Alignment:
Q  220 taaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattgctgag 319  Q
    ||||| ||| |||||||| | ||||||||| ||| |||| ||||||||  ||||||       | |||||| ||||| |||||||||| |||||||| ||    
T  6927770 taaacagcacttttcgccccctatgtttcataatgttgcaattttggccccctattaaaaaaatagcaattttagcccctttcatcccaaaattgctcag 6927671  T
Q  320 aagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatattt 393  Q
    |||| ||| | |||| ||||||||||| ||||||| || || ||||||||||||||||||||||||||||||||    
T  6927670 aagatgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatattt 6927597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 309 - 518
Target Start/End: Original strand, 40836271 - 40836483
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgt-aaagataaggggtcaaaaaacatatttttcttatgtta-ta 406  Q
    |||||||||||||| |||| | |||| ||||||||||||||||||| || || ||| | | | |||||||||||||||||||||||  ||||| |||       
T  40836271 aaattgctgagaagccgccacgtgtcccaaaaaaggggccataatcgcaactttttttgagatataaggggtcaaaaaacatatttcccttatattaggg 40836370  T
Q  407 ggtcaaaagagcatatttccctaaacataggatgccacttttgcca--nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaa 503  Q
    |||||||||| ||||||||||||||||| ||  | |||||||||||         |||| ||||||||||||||||||||||||||||||| ||||||||    
T  40836371 ggtcaaaagaacatatttccctaaacatggg--gtcacttttgccatttttttttaatagggggtcaaaatcgcaacattttaaaacttagggggcgaaa 40836468  T
Q  504 agtggagtttagcct 518  Q
    | || ||||||||||    
T  40836469 aatgcagtttagcct 40836483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 339 - 517
Target Start/End: Complemental strand, 48860883 - 48860704
Alignment:
Q  339 aaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaagagcatatttccctaaacatagg 437  Q
    |||||||  ||||||| || || ||||||||||||||||||||||||||||||||  |||||||||  ||||||||| |||||||||||||||||||| |    
T  48860883 aaaagggatcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagaaggtcaaaatagcatatttccctaaacataag 48860784  T
Q  438 atgccacttttgccannnnnnnaataggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcc 517  Q
      | || ||||  ||       |  ||||||||||||  |||||||||||||||||| ||||| ||||||||||||||||    
T  48860783 gggtcatttttatcattttttaataaggggtcaaaattacaacattttaaaacttagggggcgcaaagtggagtttagcc 48860704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 216 - 519
Target Start/End: Complemental strand, 20002012 - 20001709
Alignment:
Q  216 aggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattgc 315  Q
    ||||||||||||| ||||| || || | |||||||||| |||||||||||||  ||||||       | |||||| |  ||  ||||||||| ||||||     
T  20002012 aggctaaactgcacttttctcccctaa-gtttcaaaatgttgcgattttggccccctattaaaaaaatagcaattttgccccttttcatcccaaaattgt 20001914  T
Q  316 tgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaa 414  Q
    |||||||||||| | |||  ||||| |||||||||| || || || ||||  || ||||||||  | | | |||||||  |||||||||   ||||||||    
T  20001913 tgagaagacgccacgtgttccaaaacaggggccatagtcgcaactttttgagaatataaggggcaagagatcatatttcccttatgttagggggtcaaaa 20001814  T
Q  415 gagcatatttccctaaacataggatgccacttttgccannnnnnnaataggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagttta 514  Q
    |||||||||||||||||||||||  | |||||||||         |||||||||||||||||||||||||| |||||||| |||  ||||||| ||||||    
T  20001813 gagcatatttccctaaacatagggggtcacttttgcactttttttaataggggtcaaaatcgcaacattttgaaacttagggggttaaaagtgcagttta 20001714  T
Q  515 gcctt 519  Q
     ||||    
T  20001713 tcctt 20001709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 309 - 506
Target Start/End: Original strand, 33279678 - 33279877
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttttcttatgtta-ta 406  Q
    ||||||||||||||||||| | |||||||||||| ||| |||||||  | || |||||||| ||||||| |||||| | |||||||  |||||||||       
T  33279678 aaattgctgagaagacgccacgtgtctcaaaaaaagggtcataatcgtaact-tttgtaaatataagggatcaaaagagcatatttcccttatgttaggg 33279776  T
Q  407 ggtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaa 504  Q
    |||||||||||||||||| |||||||| ||   |||||||||||||        |||| ||||||||||||||||||||||||||||||| |||||||||    
T  33279777 ggtcaaaagagcatattttcctaaaca-agagggccacttttgccattttttttaatagggggtcaaaatcgcaacattttaaaacttagggggcgaaaa 33279875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 309 - 434
Target Start/End: Original strand, 26126999 - 26127125
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttata-g 407  Q
    ||||||||||||||||||| || |||  ||||||| |||||||||| || || ||||||||||||||||| |||||| |||||||  | ||||||| | |    
T  26126999 aaattgctgagaagacgccacaagtccaaaaaaagaggccataatcgcaactttttgtaaagataaggggccaaaaagcatatttcccctatgttagagg 26127098  T
Q  408 gtcaaaagagcatatttccctaaacat 434  Q
    ||||||| | |||||||||||||||||    
T  26127099 gtcaaaataacatatttccctaaacat 26127125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 407 - 519
Target Start/End: Complemental strand, 3821025 - 3820915
Alignment:
Q  407 ggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaataggggtcaaaatcgcaacattttaaaacttagagggcgaaaagt 506  Q
    |||||||||||||||||||||||||||| || |  |||||||||||       ||||||||||||||||||||||||||||||||||| | || ||||||    
T  3821025 ggtcaaaagagcatatttccctaaacatggggt--cacttttgccatttttttaataggggtcaaaatcgcaacattttaaaacttagggagcaaaaagt 3820928  T
Q  507 ggagtttagcctt 519  Q
    | | |||||||||    
T  3820927 gcattttagcctt 3820915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 304 - 519
Target Start/End: Complemental strand, 22416550 - 22416331
Alignment:
Q  304 tcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttttcttatgt 402  Q
    |||| |||||| |||||||||||| | |||| |||| |||||| ||||||  || || ||||||||||||| ||||||||| | |||||||  |||||||    
T  22416550 tcccaaaattgttgagaagacgccacgtgtcccaaataaggggtcataattgcaactttttgtaaagataatgggtcaaaagagcatatttaccttatgt 22416451  T
Q  403 ta-taggtcaaaagagcatatttccctaaaca-taggatgccacttttgcca-nnnnnnnaatagggg-tcaaaatcgcaacattttaaaacttagaggg 498  Q
    ||  ||||||||||||||||| |||||||||| | ||  | |||||||||||        |||||||| ||||||| |||||||| |||||||||| |||    
T  22416450 tagaaggtcaaaagagcatatatccctaaacattggggggtcacttttgccattttttttaataggggatcaaaattgcaacattataaaacttag-ggg 22416352  T
Q  499 cgaaaagtggagtttagcctt 519  Q
    |||||||||  ||||||||||    
T  22416351 cgaaaagtgttgtttagcctt 22416331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 285 - 434
Target Start/End: Original strand, 26177025 - 26177175
Alignment:
Q  285 gcaattctagcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa 384  Q
    |||||| | |||| |||| |||| ||||||||||||||| ||| || ||| |||||||| |||||||||| || || ||||||||||||| | | |||||    
T  26177025 gcaattttggcctatttcgtcccaaaattgctgagaagaagccacaagtcccaaaaaagaggccataatcgcaactttttgtaaagataatgagccaaaa 26177124  T
Q  385 aacatatttttcttatgttata-ggtcaaaagagcatatttccctaaacat 434  Q
    | |||||||  | ||||||| | |||||||| ||||||||||||| |||||    
T  26177125 agcatatttcccctatgttagagggtcaaaatagcatatttccctgaacat 26177175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 285 - 494
Target Start/End: Complemental strand, 33105176 - 33104965
Alignment:
Q  285 gcaattctagcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa 384  Q
    |||||| | |||| ||||||||| |||||| |||||||||||| | |||| ||||| | |||  ||||||  | || ||||  |||| ||||| ||||||    
T  33105176 gcaattttggcctatttcatcccaaaattgatgagaagacgccacgtgtcccaaaacatgggaaataatcgaaactttttgggaagaaaagggatcaaaa 33105077  T
Q  385 -aacatatttttcttatgttataggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaatagggg-tcaaaatcgcaacat 482  Q
     ||||||||| ||||||| || || |||||||||||||||||||||||||| ||  | |||||| ||||       || ||||| |||||||||||||||    
T  33105076 taacatatttctcttatgatagagatcaaaagagcatatttccctaaacatggggggtcactttagccatttttttaacaggggatcaaaatcgcaacat 33104977  T
Q  483 tttaaaacttag 494  Q
    ||||||| ||||    
T  33104976 tttaaaatttag 33104965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 298 - 493
Target Start/End: Complemental strand, 23320582 - 23320391
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttc 396  Q
    ||||| |||| |||||||||| |||||||| |||||| |||||| |||||||||||  || || ||||  ||||||||  ||||| | | || | || ||    
T  23320582 ctttcgtcccaaaattgctgaaaagacgccacatgtcccaaaaa-ggggccataatagcaactttttgagaagataagaagtcaatatatcagacttctc 23320484  T
Q  397 ttatgttataggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaataggggtcaaaatcgcaacattttaaaactta 493  Q
    ||||||||  |||||||||||||||||||||||||||| ||||  |||||||| ||        |||||||||||||||||||| ||||||||||||    
T  23320483 ttatgttaggggtcaaaagagcatatttccctaaacatgggat--cacttttgtcatttttc--ataggggtcaaaatcgcaactttttaaaactta 23320391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 283 - 518
Target Start/End: Complemental strand, 36311388 - 36311151
Alignment:
Q  283 tggcaattctagcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaa 382  Q
    |||||||| | ||| ||||| |||| |||||| |||||||| ||| | |||| ||||| | ||||| ||||| || || ||||  |||||||||||| ||    
T  36311388 tggcaattttggcccctttcgtcccaaaattgttgagaagaagccacgtgtcccaaaatatgggccgtaatcgcaactatttgagaagataaggggttaa 36311289  T
Q  383 aaaa-catatttttcttatgttatagg-tcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnn--aataggggtcaaaatcgca 478  Q
    ||   |||||||  |||||||||| || ||||||||| |||||| |||||| || || |  |||||||||||         |||||||| ||||||||||    
T  36311288 aatgtcatatttcccttatgttatggggtcaaaagagtatattttcctaaatatggggt--cacttttgccatttttttttaataggggccaaaatcgca 36311191  T
Q  479 acattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    |||||||||||||||| || ||||||||| ||||||||||    
T  36311190 acattttaaaacttaggggacgaaaagtgcagtttagcct 36311151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 217 - 384
Target Start/End: Complemental strand, 3821186 - 3821018
Alignment:
Q  217 ggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctatt-nnnnnnntggcaattctagcctctttcatcccgaaattgc 315  Q
    ||||||| |||| |||||||||||||  ||| ||||| ||||||||||||| |||||||        |   ||||  ||||| ||||||||  |||||||    
T  3821186 ggctaaaatgcacttttcgcctcttaaatttgaaaatgttgcgattttggcctcctattaaaagaaattaaaatttcagcctttttcatcctaaaattgc 3821087  T
Q  316 tgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa 384  Q
    ||||||||| || |||||| ||||||||||| ||||||| || || ||||||||||||| |||||||||    
T  3821086 tgagaagacaccacatgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaagggtcaaaa 3821018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 464 - 527
Target Start/End: Complemental strand, 26633413 - 26633351
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagccttgaatttat 527  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||    
T  26633413 ggggtcaaaatcgcaacattttaaaacttag-gggcgaaaagtgcagtttagccttgtatttat 26633351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 460 - 530
Target Start/End: Complemental strand, 33279644 - 33279573
Alignment:
Q  460 aataggggtc-aaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagccttgaatttatcca 530  Q
    |||||||||| ||||||||||||||| |||||||| ||||||||||||| ||||||||||| ||||||||||    
T  33279644 aataggggtctaaaatcgcaacatttcaaaacttaaagggcgaaaagtgcagtttagccttcaatttatcca 33279573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 362 - 434
Target Start/End: Original strand, 9496363 - 9496436
Alignment:
Q  362 tttgtaaagataaggggtcaaaaaacatatttttcttatgttatagg-tcaaaagagcatatttccctaaacat 434  Q
    ||||||||||||||||| |||||| |||||||   |||||||| ||| ||||||||||||||||||||||||||    
T  9496363 tttgtaaagataaggggacaaaaagcatatttcctttatgttagagggtcaaaagagcatatttccctaaacat 9496436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 375 - 494
Target Start/End: Original strand, 49657939 - 49658057
Alignment:
Q  375 ggggtcaaaaaa-catatttttcttatgttataggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaataggggtcaaaa 473  Q
    |||||||||| | |||||||| |||||||||  ||||||||||||||||||||||||| || ||  | ||||||||| |       |||| |||||||||    
T  49657939 ggggtcaaaagatcatattttccttatgttaggggtcaaaagagcatatttccctaaatattgg--gtcacttttgcaatttttttaatatgggtcaaaa 49658036  T
Q  474 tcgcaacattttaaaacttag 494  Q
    | |||||||||||||||||||    
T  49658037 ttgcaacattttaaaacttag 49658057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 1743505 - 1743554
Alignment:
Q  469 caaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    |||||||||||||||||||||||||| | |||||||||| ||||||||||    
T  1743505 caaaatcgcaacattttaaaacttagggagcgaaaagtgcagtttagcct 1743554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 43668639 - 43668571
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggg 377  Q
    ||||||||||||||||||| |||||| ||||| ||||| ||||||| || || |||||||| |||||||    
T  43668639 aaattgctgagaagacgccacatgtcccaaaacaggggtcataatcgcaactttttgtaaaaataaggg 43668571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 469 - 516
Target Start/End: Complemental strand, 40836228 - 40836181
Alignment:
Q  469 caaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagc 516  Q
    |||||||||||||||||||||||||| || ||||||||| ||||||||    
T  40836228 caaaatcgcaacattttaaaacttaggggacgaaaagtgtagtttagc 40836181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 463 - 517
Target Start/End: Original strand, 4776068 - 4776122
Alignment:
Q  463 aggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcc 517  Q
    ||||| |||||||||||||||||||| ||||||||||||||| |  |||||||||    
T  4776068 aggggccaaaatcgcaacattttaaatcttagagggcgaaaaatccagtttagcc 4776122  T

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Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 464 - 517
Target Start/End: Complemental strand, 8338993 - 8338940
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcc 517  Q
    |||||||||||||||||||||| |||| ||| |||||||||||| | |||||||    
T  8338993 ggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 8338940  T

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Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 298 - 434
Target Start/End: Original strand, 35201077 - 35201213
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttttc 396  Q
    |||||||||| |||||| |||||||| ||| ||||||  |||| ||| ||||| |||  | || ||||  ||||||||||||||||| | |||||||       
T  35201077 ctttcatcccaaaattgttgagaagatgccacatgtcctaaaacaggagccatgatcgtaactttttgagaagataaggggtcaaaatatcatatttcct 35201176  T
Q  397 ttatgttataggtcaaaagagcatatttccctaaacat 434  Q
    ||||||||  |||||||||||||| |||||| ||||||    
T  35201177 ttatgtta-gggtcaaaagagcatgtttcccaaaacat 35201213  T

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Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 507
Target Start/End: Original strand, 23320606 - 23320654
Alignment:
Q  460 aatagggg-tcaaaatcgcaacattttaaaacttagagggcgaaaagtg 507  Q
    |||||||| ||||||||||||||||||||||||||| || |||||||||    
T  23320606 aataggggatcaaaatcgcaacattttaaaacttagtggtcgaaaagtg 23320654  T

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Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 213 - 265
Target Start/End: Complemental strand, 40836486 - 40836434
Alignment:
Q  213 tttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttg 265  Q
    ||||||||||||||||||||||||| | || |||| ||||| |||||||||||    
T  40836486 tttaggctaaactgcatttttcgccccctaagttttaaaatgttgcgattttg 40836434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 515
Target Start/End: Complemental strand, 4775903 - 4775852
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttag 515  Q
    |||| |||||| |||||||||| |||||||||||| |||||||| |||||||    
T  4775903 ggggccaaaattgcaacattttgaaacttagagggtgaaaagtgtagtttag 4775852  T

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Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 519
Target Start/End: Original strand, 20001959 - 20002013
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    |||| ||||||||||||||||| |||||||| ||| |||||||| |||||||||||    
T  20001959 ggggccaaaatcgcaacattttgaaacttag-gggagaaaagtgcagtttagcctt 20002013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 353
Target Start/End: Original strand, 46387579 - 46387718
Alignment:
Q  213 tttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaat 312  Q
    |||||| |||||||||||||| ||||| || |||||||||| |||||||||||||  | ||||       | |||||| | |||  ||||||| | ||||    
T  46387579 tttaggttaaactgcatttttggcctc-taagtttcaaaatcttgcgattttggccccttatttaaaaaattgcaattttggcccatttcatctcaaaat 46387677  T
Q  313 tgctgagaagacgccgcatgtctcaaaaaaggggccataat 353  Q
    || ||||||||||||   |||  ||||||||||||||||||    
T  46387678 tgatgagaagacgccatgtgttccaaaaaaggggccataat 46387718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 3781182 - 3781124
Alignment:
Q  217 ggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctatt 275  Q
    |||||||||||| |||||||||||||  ||| ||||| || |||||||||| |||||||    
T  3781182 ggctaaactgcacttttcgcctcttaaattttaaaatgttacgattttggcctcctatt 3781124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 518
Target Start/End: Complemental strand, 22447793 - 22447739
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    |||| |||||| |||||||||| |||| ||| |||||||||||| ||||||||||    
T  22447793 ggggccaaaattgcaacattttgaaacatagggggcgaaaagtgcagtttagcct 22447739  T

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Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 518
Target Start/End: Complemental strand, 26628078 - 26628024
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    |||| |||||| |||||||||| |||| ||| |||||||||||| ||||||||||    
T  26628078 ggggccaaaattgcaacattttgaaacatagggggcgaaaagtgtagtttagcct 26628024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 518
Target Start/End: Complemental strand, 34878582 - 34878528
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    |||| ||||||||||||||||| |||| ||| |||||| ||||| ||||||||||    
T  34878582 ggggccaaaatcgcaacattttgaaacatagggggcgagaagtgcagtttagcct 34878528  T

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Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 470 - 519
Target Start/End: Complemental strand, 1743302 - 1743253
Alignment:
Q  470 aaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    ||||||| |||||||| |||||||| | |||||||||| |||||||||||    
T  1743302 aaaatcgaaacattttgaaacttagggtgcgaaaagtgcagtttagcctt 1743253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 267
Target Start/End: Complemental strand, 26628332 - 26628279
Alignment:
Q  214 ttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggc 267  Q
    |||||||||||| |||||||||||   || |||||||||| |||||||||||||    
T  26628332 ttaggctaaacttcatttttcgccctctaagtttcaaaatgttgcgattttggc 26628279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 464 - 517
Target Start/End: Complemental strand, 28154935 - 28154882
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcc 517  Q
    |||| |||||| |||||||||| |||| ||| |||||||||||| |||||||||    
T  28154935 ggggccaaaattgcaacattttgaaacatagggggcgaaaagtgtagtttagcc 28154882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 470 - 515
Target Start/End: Original strand, 32315174 - 32315219
Alignment:
Q  470 aaaatcgcaacattttaaaacttagagggcgaaaagtggagtttag 515  Q
    ||||||||||||||||||||||||  || ||||||||| |||||||    
T  32315174 aaaatcgcaacattttaaaacttaagggacgaaaagtgcagtttag 32315219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 3e-59; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 216 - 519
Target Start/End: Original strand, 5192271 - 5192577
Alignment:
Q  216 aggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattgc 315  Q
    |||||||||| || |||||||| | ||||||||||||| |||| ||||||||  ||||||       | |||||| | ||| |||| ||||  |||||||    
T  5192271 aggctaaacttcacttttcgccccctatgtttcaaaatgttgcaattttggccccctattaaataaatagcaattttggccccttttatccaaaaattgc 5192370  T
Q  316 tgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtt-ataggtcaaaa 414  Q
    |||||||||||| | |||| ||||||||||||||||||| || || |||||||||||||| |||||||||||||||||  |||||||| | |||||||||    
T  5192371 tgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataagaggtcaaaaaacatatttcccttatgttaagaggtcaaaa 5192470  T
Q  415 gagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaatag-gggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtt 512  Q
    |||||||||||||||||||||||| | |||||||||||        ||||| ||  ||||||||||||||||||||||||||||||||||||||| ||||    
T  5192471 gagcatatttccctaaacataggaggtcacttttgccattttttttaatagaggaccaaaatcgcaacattttaaaacttagagggcgaaaagtgaagtt 5192570  T
Q  513 tagcctt 519  Q
    || ||||    
T  5192571 taacctt 5192577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 214 - 519
Target Start/End: Original strand, 4518866 - 4519173
Alignment:
Q  214 ttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaatt 313  Q
    |||||||||| |||| |||||||| | ||| ||| |||||||||||||||||||  ||||||       |||||||| | ||| ||| |||| | |||||    
T  4518866 ttaggctaaagtgcacttttcgccccctatattttaaaatattgcgattttggccccctattaaaaaaatggcaattttggcccctt-catctcaaaatt 4518964  T
Q  314 gctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaa 412  Q
    | |||||||||||| | |||| ||||||||||||||||||| || || ||||||||||||||||||||||||||||||||  |||||||||  || ||||    
T  4518965 gttgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggagatcaa 4519064  T
Q  413 aagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaataggg-gtcaaaatcgcaacattttaaaacttagagggcgaaaagtggag 510  Q
    |||||||||||||||||||||||||  | |||||||||||        ||||||| | ||||||||||||||||| ||||||||||| ||||||||| ||    
T  4519065 aagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggagccaaaatcgcaacattttgaaacttagaggacgaaaagtgaag 4519164  T
Q  511 tttagcctt 519  Q
    |||||||||    
T  4519165 tttagcctt 4519173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 211 - 517
Target Start/End: Original strand, 8802394 - 8802703
Alignment:
Q  211 aatttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccga 309  Q
    ||||||||||||| |||| |||||| | | ||||||| ||||| |||||||||||||  ||||||        |||||||| | ||| | |||||||| |    
T  8802394 aatttaggctaaagtgcacttttcgtcccgtatgttttaaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccccttcatcccaa 8802493  T
Q  310 aattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttat-agg 408  Q
    |||||||||||||||||| |||||  ||||||||||||||||||| || || |||||||||||||||||||||||| | |||||  |||||||||  |||    
T  8802494 aattgctgagaagacgccacatgttccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagc-tatttcccttatgttaggagg 8802592  T
Q  409 tcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagt 506  Q
    ||||||||||||||||||||||||||||   | |||||||||||        |||| |||| ||||||||||||||||| ||||||||||||||||||||    
T  8802593 tcaaaagagcatatttccctaaacatagagggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagt 8802692  T
Q  507 ggagtttagcc 517  Q
      |||||||||    
T  8802693 aaagtttagcc 8802703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 213 - 519
Target Start/End: Complemental strand, 44147278 - 44146970
Alignment:
Q  213 tttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaa 311  Q
    ||||||||||| |||| |||||||| | |||||||||||||||||||||||||||  ||||||        || ||||| | ||||| || ||||| |||    
T  44147278 tttaggctaaagtgcacttttcgccccatatgtttcaaaatattgcgattttggccccctattaaaaaaaatgacaattttggcctcctttatcccaaaa 44147179  T
Q  312 ttgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtc 410  Q
    ||||||||||||||||   | || ||||||||||| ||||||| || || |||||||||||||||||||||||| |||||||  |||||||||  |||||    
T  44147178 ttgctgagaagacgccatgtatcccaaaaaaggggtcataatcgcaact-tttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtc 44147080  T
Q  411 aaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtgg 508  Q
    |||| ||||||||||||||||||||||  | |||||||||||        |||| |||| ||||||||||||||||| |||||| ||||||||||||||     
T  44147079 aaaatagcatatttccctaaacatagg-ggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttggagggcgaaaagtga 44146981  T
Q  509 agtttagcctt 519  Q
    |||||||||||    
T  44146980 agtttagcctt 44146970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 217 - 514
Target Start/End: Complemental strand, 38630359 - 38630058
Alignment:
Q  217 ggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaattgc 315  Q
    ||||||| || |||||||||||  ||||||| ||||| ||||||||||| |  ||||||        |||||||| | ||| | |||||| | |||||||    
T  38630359 ggctaaagtgtatttttcgccttctatgttttaaaatgttgcgattttgaccccctattaaaaaaaatggcaattttggcccccttcatctcaaaattgc 38630260  T
Q  316 tgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaa 414  Q
    |||||||||||| | |||| ||||||||||| ||||||| || || |||||||||||||||||||||||| |||||||  |||||||||  |||||||||    
T  38630259 tgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaa 38630160  T
Q  415 gagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaatagggg-tcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtt 512  Q
    |||||||||||||||||||||||  | ||||||| |||        |||||||| |||||||||||||||||| |||||||||||||||||| || ||||    
T  38630159 gagcatatttccctaaacatagggagtcacttttaccattttttttaataggggatcaaaatcgcaacattttgaaacttagagggcgaaaaatgaagtt 38630060  T
Q  513 ta 514  Q
    ||    
T  38630059 ta 38630058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 215 - 452
Target Start/End: Original strand, 19391386 - 19391624
Alignment:
Q  215 taggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaatt 313  Q
    |||||||||||||| |||||||| || |||||||||||| |||| |||||||   ||||||        | |||||| | ||| |||||||||  |||||    
T  19391386 taggctaaactgcacttttcgcccct-atgtttcaaaatgttgcaattttggtcccctattaaaaaaaatagcaattttggcccctttcatccaaaaatt 19391484  T
Q  314 gctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaa 412  Q
    |||||||||||||| | |||| ||||||||||||||||||| || || ||||||||||||||||||||||||||||||||  |||||||||  |||||||    
T  19391485 gctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaa 19391584  T
Q  413 aagagcatatttccctaaacataggatgccacttttgcca 452  Q
    |||||||||||||||||||||||||  | |||||||||||    
T  19391585 aagagcatatttccctaaacatagggggtcacttttgcca 19391624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 298 - 519
Target Start/End: Complemental strand, 17648465 - 17648241
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttct 397  Q
    |||||||||  ||||||||||||||| ||| | ||||  ||||| |||||||||||| || || |||||||||||||||||||||||| |||||||  ||    
T  17648465 ctttcatccaaaaattgctgagaagaggccacgtgtcctaaaaagggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttccct 17648366  T
Q  398 tatgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaataggg-gtcaaaatcgcaacattttaaaacttag 494  Q
    |||||||  ||||||||||||||||||||||||||||||||  | |||||||||||        ||||||| | ||||||| ||||||||| ||||||||    
T  17648365 tatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggagccaaaatcacaacattttgaaacttag 17648266  T
Q  495 agggcgaaaagtggagtttagcctt 519  Q
    ||||||||||||| |||||||||||    
T  17648265 agggcgaaaagtgaagtttagcctt 17648241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 283 - 517
Target Start/End: Original strand, 30784332 - 30784568
Alignment:
Q  283 tggcaattctagcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaa 382  Q
    |||||||| | ||| | |||||||  ||||||||||||||| | | | |||| |||||||||| |||||||| || || |||||||||||||||||||||    
T  30784332 tggcaattttggccccattcatccaaaaattgctgagaagaagtcacgtgtcccaaaaaaggg-ccataatcgcaactttttgtaaagataaggggtcaa 30784430  T
Q  383 aaaacatatttttcttatgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaat-aggggtcaaaatcgcaa 479  Q
    |||||||||||  |||||||||  |||||||||||||||||||||||||||||| |  | |||||||||||        ||| ||||| |||||||||||    
T  30784431 aaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatacggggtcacttttgccattttttttaataaggggccaaaatcgcaa 30784530  T
Q  480 cattttaaaacttagagggcgaaaagtggagtttagcc 517  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  30784531 cattttgaaacttagagggcgaaaagtgaagtttagcc 30784568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 309 - 517
Target Start/End: Complemental strand, 19924476 - 19924265
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-tag 407  Q
    ||||||||||||||||||| | |||| ||||||||||| ||||||| || || |||||||||||||||||||||||| |||||||  |||||||||  ||    
T  19924476 aaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggag 19924377  T
Q  408 gtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaat-aggggtcaaaatcgcaacattttaaaacttagagggcgaaaag 505  Q
    |||| ||||| |||||||||||||||||||  | |||||||||||        ||| ||||| |||||| ||||||||||||||||||||||||||||||    
T  19924376 gtcagaagagtatatttccctaaacatagggggtcacttttgccattttttttaataaggggccaaaattgcaacattttaaaacttagagggcgaaaag 19924277  T
Q  506 tggagtttagcc 517  Q
    ||  ||||||||    
T  19924276 tgaggtttagcc 19924265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 309 - 513
Target Start/End: Original strand, 12723354 - 12723561
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-tag 407  Q
    |||||||||||||||||||   |||| |||||||||| |||||||| || || ||||||||||||| ||||||||||||||||||  |||||||||  ||    
T  12723354 aaattgctgagaagacgccatgtgtcccaaaaaagggaccataatcgcaactttttgtaaagataacgggtcaaaaaacatatttcccttatgttaggag 12723453  T
Q  408 gtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaag 505  Q
    |||||||||||||||||| |||||||||||  | || ||||||||        |||| |||| ||||||||||||||||| |||||||||||||||||||    
T  12723454 gtcaaaagagcatatttctctaaacatagggggtcatttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaag 12723553  T
Q  506 tggagttt 513  Q
    || |||||    
T  12723554 tgaagttt 12723561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 215 - 518
Target Start/End: Original strand, 4807598 - 4807906
Alignment:
Q  215 taggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaatt 313  Q
    |||||||||||||| |||||||||| ||||||||||||| |||| ||||||||  ||||||        | |||||| | ||   ||||||||  |||||    
T  4807598 taggctaaactgcacttttcgcctcctatgtttcaaaatgttgcaattttggccccctattaaaaaaaatagcaattttggcacatttcatccaaaaatt 4807697  T
Q  314 gctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaa 412  Q
     ||||||||||||| | |||  ||||||||||||||||||| || || |||||||||||||||||||||||| |||||||  |||||||||  |||||||    
T  4807698 actgagaagacgccacgtgttccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaa 4807797  T
Q  413 aagagcatatttccctaaacatag-gatgccacttttgcca-nnnnnnnaataggggtca-aaatcgcaacattttaaaacttagagggcgaaaagtgga 509  Q
    |||| ||||||||| ||||||||| |  | ||||||||| |        |||||||| || ||||||||||||||| ||||||| | ||||||||||| |    
T  4807798 aagaacatatttccttaaacatagaggggtcacttttgctattttttttaatagggggcataaatcgcaacattttgaaacttaaaaggcgaaaagtgaa 4807897  T
Q  510 gtttagcct 518  Q
    |||||||||    
T  4807898 gtttagcct 4807906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 285 - 517
Target Start/End: Complemental strand, 33895608 - 33895375
Alignment:
Q  285 gcaattctagcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa 384  Q
    |||||| | ||| |||||||||  ||||| ||||||||||||| | |||| ||||||| ||||||||||  || || |||||||||||||||||| ||||    
T  33895608 gcaattttggcccctttcatccaaaaatttctgagaagacgccacgtgtc-caaaaaaagggccataattgcaactttttgtaaagataaggggttaaaa 33895510  T
Q  385 aacatatttttcttatgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaata-ggggtcaaaatcgcaacat 482  Q
    |||||||||  |||||||||  ||||||||||||||||||||||||||||||||    |||||||||         |||| ||   |||||| |||||||    
T  33895509 aacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggatcacttttgctttttttttaatatggaaccaaaattgcaacat 33895410  T
Q  483 tttaaaacttagagggcgaaaagtggagtttagcc 517  Q
    ||||||||||||||||||||||||| |||||||||    
T  33895409 tttaaaacttagagggcgaaaagtgaagtttagcc 33895375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 216 - 517
Target Start/End: Original strand, 21666273 - 21666577
Alignment:
Q  216 aggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaattg 314  Q
    ||||||||||||| |||||| | |||| ||||| |||| ||| |||||| ||| ||||||        |||||||| | ||| | ||| || | ||||||    
T  21666273 aggctaaactgcacttttcgtcccttaagtttcgaaatgttgtgattttagctccctattaaaaaaaatggcaattttggcccccttcgtctcaaaattg 21666372  T
Q  315 ctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaa 413  Q
    |||||||||||||   |||| ||||||||||||||||||  || || | | ||||||||||||||||||||||||||||  |||||||||   ||||||     
T  21666373 ctgagaagacgccatgtgtcccaaaaaaggggccataattgcaactttatctaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaag 21666472  T
Q  414 agagcatatttccctaaacataggatgccacttttgccannnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtt 512  Q
    ||||||||||||||||||||| ||  | |||||||||||       |||| |||| ||||||||||||||||| ||||| || |||| ||||||| ||||    
T  21666473 agagcatatttccctaaacatggggggtcacttttgccatttttttaatagggggccaaaatcgcaacattttgaaactaagggggcaaaaagtgcagtt 21666572  T
Q  513 tagcc 517  Q
     ||||    
T  21666573 cagcc 21666577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 218 - 517
Target Start/End: Original strand, 32400325 - 32400624
Alignment:
Q  218 gctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattgctg 317  Q
    ||||||||||| || |||||   ||||||| ||||| |||||||||||  | ||||||       |||||| | ||||| ||||||| || |||||||||    
T  32400325 gctaaactgcacttctcgccctctatgttttaaaatgttgcgattttgattccctattaaaaaaatggcaactttagcc-ctttcataccaaaattgctg 32400423  T
Q  318 agaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaaga 416  Q
    ||||||| || | |||  ||||||||||| ||||||  || || |||||||||||||  ||||||||  |||||||  |||||||||   |||||||||     
T  32400424 agaagacaccacgtgttccaaaaaaggggtcataattgcaactttttgtaaagataaatggtcaaaaggcatatttcccttatgttagggggtcaaaagc 32400523  T
Q  417 gcatatttccctaaacataggatgccacttttgccannnnnnnaataggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagc 516  Q
    ||||||||| |||||||||||  | |||||||||||       ||||| ||||||||| | |||||||||||| |||| ||||||||||| |||||||||    
T  32400524 gcatatttcactaaacatagggggtcacttttgccatttttttaatagaggtcaaaattgtaacattttaaaatttagggggcgaaaagtagagtttagc 32400623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 299 - 518
Target Start/End: Original strand, 22452256 - 22452478
Alignment:
Q  299 tttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttctt 398  Q
    |||| |||| ||||||||||||||||||| | |||| ||||||| |||| ||| || || || |||||||||||||| ||||||||| |||||||  |||    
T  22452256 tttcgtcccaaaattgctgagaagacgccacgtgtcccaaaaaaagggctatattcgcaactttttgtaaagataagaggtcaaaaagcatatttccctt 22452355  T
Q  399 atgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgcc-annnnnnnaatagggg-tcaaaatcgcaacattttaaaacttaga 495  Q
    ||||||  |||||||||||||||||||||||||| ||| || | ||||||||||         ||||||||  ||||||||||| ||||| ||| ||||     
T  22452356 atgttaggaggtcaaaagagcatatttccctaaatatatgaggtcacttttgccgttttttttaataggggaccaaaatcgcaatattttgaaatttagg 22452455  T
Q  496 gggcgaaaagtggagtttagcct 518  Q
    |||| ||||||||||||||||||    
T  22452456 gggctaaaagtggagtttagcct 22452478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 380 - 518
Target Start/End: Original strand, 21929967 - 21930106
Alignment:
Q  380 caaaaaacatatttttcttatgttat-aggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaata-ggggtcaaaatcgc 477  Q
    |||||| |||||||  |||||||||  ||||||||||||||||||||||||||||||||  | |||||||||||       |||| ||||||||||||||    
T  21929967 caaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagg-ggtcacttttgccatttttttaatagggggtcaaaatcgc 21930065  T
Q  478 aacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    |||||||| ||||||||||||||||||||| ||||||||||    
T  21930066 aacattttgaaacttagagggcgaaaagtgaagtttagcct 21930106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 298 - 434
Target Start/End: Original strand, 18252968 - 18253105
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttc 396  Q
    ||||| |||| ||||||||||||||||||| | |||| ||||| || |||||||||| || || ||||  ||||||||||||||||||| |||||||  |    
T  18252968 ctttcgtcccaaaattgctgagaagacgccacgtgtcccaaaacagtggccataatcacaactttttgagaagataaggggtcaaaaaatcatatttccc 18253067  T
Q  397 ttatgttataggtcaaaagagcatatttccctaaacat 434  Q
    ||||||||| |||||||| | |||||||||||||||||    
T  18253068 ttatgttatgggtcaaaaaaacatatttccctaaacat 18253105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 298 - 393
Target Start/End: Complemental strand, 23565311 - 23565216
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatattt 393  Q
    |||||||||  ||||||||||||||||||| ||||| | |||||| ||||||||||| || || |||||||||||||||||||||||| |||||||    
T  23565311 ctttcatccaaaaattgctgagaagacgccacatgtttaaaaaaaagggccataatcgcaactttttgtaaagataaggggtcaaaaagcatattt 23565216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 296 - 436
Target Start/End: Complemental strand, 3208204 - 3208063
Alignment:
Q  296 ctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttt 394  Q
    ||||||| |||| ||||| ||||||||||||| | |||| ||||||| ||| ||||||| || || |||   ||||||||||||||||| | |||||||     
T  3208204 ctctttcgtcccaaaattactgagaagacgccacgtgtcccaaaaaatgggtcataatcgcaactttttaagaagataaggggtcaaaatatcatatttc 3208105  T
Q  395 tcttatgttataggtcaaaagagcatatttccctaaacatag 436  Q
     |||||||||  |||||||||| |||||||||||||||||||    
T  3208104 ccttatgttaggggtcaaaagaacatatttccctaaacatag 3208063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 214 - 518
Target Start/End: Original strand, 18881501 - 18881806
Alignment:
Q  214 ttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaatt 313  Q
    ||||||||||||||  |||||| | |||| ||||  |||| |||||||||||||  ||||||       |||||||| | ||| | ||| |||| |||||    
T  18881501 ttaggctaaactgcgcttttcgacccttaagttttgaaatgttgcgattttggccccctattaaaaaaatggcaattttggcccccttcgtcccaaaatt 18881600  T
Q  314 gctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttttcttatgtta-taggtca 411  Q
    | ||||||||| ||   |||| |||| |||||| ||||||  || || ||||||||||||||||||||||| | | |||||  |||||||||  || |||    
T  18881601 gttgagaagacaccaagtgtcccaaataaggggtcataattgcaactttttgtaaagataaggggtcaaaagagcgtatttcccttatgttagaagctca 18881700  T
Q  412 aaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtgga 509  Q
    ||| ||||||||||||||||||| |   | |||||||||||        |||| ||||||||||| |||||||| |||||||||| ||||||||||||      
T  18881701 aaatagcatatttccctaaacatgg---gtcacttttgccattttttttaatagggggtcaaaattgcaacattataaaacttagggggcgaaaagtgtt 18881797  T
Q  510 gtttagcct 518  Q
    |||||||||    
T  18881798 gtttagcct 18881806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 313 - 434
Target Start/End: Original strand, 7117211 - 7117334
Alignment:
Q  313 tgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttttcttatgtta-taggtc 410  Q
    ||||||||||||||| |||||| ||||||| ||||||||||  || || |||||||||||||||||| |||| |||| |||   ||| ||||| | ||||    
T  7117211 tgctgagaagacgccacatgtcccaaaaaaagggccataattgcaactttttgtaaagataaggggttaaaagaacacattccccttctgttagtgggtc 7117310  T
Q  411 aaaagagcatatttccctaaacat 434  Q
    ||||||||||||||| ||||||||    
T  7117311 aaaagagcatatttctctaaacat 7117334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 309 - 433
Target Start/End: Complemental strand, 31268490 - 31268365
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaagggg-ccataatcccacctctttgtaaagataaggggtc-aaaaaacatatttttcttatgttata 406  Q
    |||||||| ||||||||||||||||| |||||||||||  ||||||| || || ||| ||||||||| ||||| ||| | |||| ||  ||||||||||     
T  31268490 aaattgctaagaagacgccgcatgtcccaaaaaaggggatcataatcacaactttttataaagataaagggtctaaagagcata-ttcccttatgttatg 31268392  T
Q  407 ggtcaaaagagcatatttccctaaaca 433  Q
    || ||||||||||||||||||||||||    
T  31268391 gggcaaaagagcatatttccctaaaca 31268365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 464 - 518
Target Start/End: Original strand, 19392817 - 19392871
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    |||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  19392817 ggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcct 19392871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 212 - 341
Target Start/End: Original strand, 21929842 - 21929972
Alignment:
Q  212 atttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctatt-nnnnnnntggcaattctagcctctttcatcccgaa 310  Q
    |||||||||||| ||||||||||||| | ||||||||||||  |||||||||||||| ||||||        | |||||| | ||| | |||||||| ||    
T  21929842 atttaggctaaagtgcatttttcgccccctatgtttcaaaacgttgcgattttggctccctattaaaaaaaattgcaattttggcccccttcatcccaaa 21929941  T
Q  311 attgctgagaagacgccgcatgtctcaaaaa 341  Q
    ||||||||||||||||| | |||| ||||||    
T  21929942 attgctgagaagacgccacgtgtcccaaaaa 21929972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 387 - 504
Target Start/End: Complemental strand, 1824737 - 1824621
Alignment:
Q  387 catatttttcttatgttataggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaatagggg-tcaaaatcgcaacatttt 485  Q
    |||||||| |||||||||  |||||||||||||||||||||||||||| ||  | |||||||||||       |||||||| ||||||   |||||||||    
T  1824737 catattttccttatgttaggggtcaaaagagcatatttccctaaacatggg--gtcacttttgccatttttttaataggggatcaaaaatacaacatttt 1824640  T
Q  486 aaaacttagagggcgaaaa 504  Q
    ||||||||| |||| ||||    
T  1824639 aaaacttagggggcaaaaa 1824621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 387 - 504
Target Start/End: Complemental strand, 1859182 - 1859066
Alignment:
Q  387 catatttttcttatgttataggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaatagggg-tcaaaatcgcaacatttt 485  Q
    |||||||| |||||||||  |||||||||||||||||||||||||||| ||  | |||||||||||       |||||||| ||||||   |||||||||    
T  1859182 catattttccttatgttaggggtcaaaagagcatatttccctaaacatggg--gtcacttttgccatttttttaataggggatcaaaaatacaacatttt 1859085  T
Q  486 aaaacttagagggcgaaaa 504  Q
    ||||||||| |||| ||||    
T  1859084 aaaacttagggggcaaaaa 1859066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 460 - 514
Target Start/End: Complemental strand, 2053206 - 2053152
Alignment:
Q  460 aataggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagttta 514  Q
    |||| |||||||||| |||||||||||||||||||||||||||||| | ||||||    
T  2053206 aatatgggtcaaaattgcaacattttaaaacttagagggcgaaaagagtagttta 2053152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 304 - 434
Target Start/End: Original strand, 4423118 - 4423250
Alignment:
Q  304 tcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttttcttatgt 402  Q
    |||| ||||||||||||||| ||| ||||| | |||||| ||| ||||||| ||  | |||| |||||||||||||||||| | |||||||  |||||||    
T  4423118 tcccaaaattgctgagaagatgccacatgt-taaaaaaaagggtcataatcgcaattttttgaaaagataaggggtcaaaagatcatatttcccttatgt 4423216  T
Q  403 tat--aggtcaaaagagcatatttccctaaacat 434  Q
    |||  |||| |||||| ||||||||| |||||||    
T  4423217 tatggaggttaaaagaacatatttccataaacat 4423250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 309 - 518
Target Start/End: Original strand, 15869431 - 15869638
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttcttatgttatag 407  Q
    |||||||||||||| |||| | |||| ||||| ||||| ||||||| || || ||||  |||| |   |||||||| | ||||||| ||||| |||| ||    
T  15869431 aaattgctgagaagtcgccacgtgtcccaaaacaggggtcataatcgcaactttttgagaagacagatggtcaaaagatcatatttctctta-gttagag 15869529  T
Q  408 gtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaataggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtg 507  Q
    |||||||||||||||||| |||||||||  | | |||||||  ||       ||||||||  |||||| ||||||||| |||||||| | || |||||||    
T  15869530 gtcaaaagagcatatttctctaaacata--aggtcacttttagcattttttgaataggggctaaaatcacaacattttgaaacttagggagccaaaagtg 15869627  T
Q  508 gagtttagcct 518  Q
     ||||||||||    
T  15869628 cagtttagcct 15869638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 362 - 517
Target Start/End: Complemental strand, 3380356 - 3380199
Alignment:
Q  362 tttgtaaagataaggggtcaaaaaacatatttttcttatgttata-ggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnna 460  Q
    |||||| ||||||| |||||||||||||||||  |||||| || | || ||||||||||||||| ||||||||| ||  | |||| ||  ||       |    
T  3380356 tttgtagagataagaggtcaaaaaacatatttcccttatgctagagggacaaaagagcatatttacctaaacatggggggtcactattttcattttttta 3380257  T
Q  461 ataggg-gtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcc 517  Q
    |||||| | ||||||||||||||||| ||||||| |||| ||||| || |||||||||    
T  3380256 atagggagccaaaatcgcaacattttgaaacttaaagggtgaaaaatgcagtttagcc 3380199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 468 - 516
Target Start/End: Complemental strand, 32400373 - 32400325
Alignment:
Q  468 tcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagc 516  Q
    ||||||||||||||||||||||| |||||||||| ||||| ||||||||    
T  32400373 tcaaaatcgcaacattttaaaacatagagggcgagaagtgcagtttagc 32400325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 309 - 434
Target Start/End: Original strand, 41688203 - 41688330
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttttcttatgtt-ata 406  Q
    |||||||||||||||| |  | |||| ||||| | ||| ||||||| || || ||||  ||||||||||||||||| | || |||||||||||||| |      
T  41688203 aaattgctgagaagacactacgtgtcccaaaacatgggtcataatcgcaactttttgagaagataaggggtcaaaatatcagatttttcttatgttaagg 41688302  T
Q  407 ggtcaaaagagcatatttccctaaacat 434  Q
    |||||||||| |||||||| ||||||||    
T  41688303 ggtcaaaagaacatatttctctaaacat 41688330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 3380199 - 3380257
Alignment:
Q  217 ggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctatt 275  Q
    |||||||||||||||||| ||  ||| |||||||||| |||||||||||||| ||||||    
T  3380199 ggctaaactgcatttttcaccctttaagtttcaaaatgttgcgattttggctccctatt 3380257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 507
Target Start/End: Complemental strand, 15869385 - 15869347
Alignment:
Q  469 caaaatcgcaacattttaaaacttagagggcgaaaagtg 507  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  15869385 caaaatcgcaacattttaaaatttagagggcgaaaagtg 15869347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 464 - 518
Target Start/End: Original strand, 23565340 - 23565394
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    ||||||||||| ||||||||||||||| ||| |||||||||||  ||||||||||    
T  23565340 ggggtcaaaattgcaacattttaaaacatagggggcgaaaagtctagtttagcct 23565394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 464 - 504
Target Start/End: Original strand, 38630306 - 38630346
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaa 504  Q
    ||||||||||||||||||||||||||| |||| ||||||||    
T  38630306 ggggtcaaaatcgcaacattttaaaacatagaaggcgaaaa 38630346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 519
Target Start/End: Complemental strand, 5192325 - 5192270
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    |||| |||||| |||||||||| |||| ||| |||||||||||| |||||||||||    
T  5192325 ggggccaaaattgcaacattttgaaacatagggggcgaaaagtgaagtttagcctt 5192270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 514
Target Start/End: Original strand, 2053434 - 2053488
Alignment:
Q  460 aataggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagttta 514  Q
    ||||||||||||||||| |||||||| | ||||||  ||||||||||| ||||||    
T  2053434 aataggggtcaaaatcgtaacattttgatacttaggtggcgaaaagtgaagttta 2053488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 470 - 515
Target Start/End: Original strand, 3208236 - 3208281
Alignment:
Q  470 aaaatcgcaacattttaaaacttagagggcgaaaagtggagtttag 515  Q
    ||||||||||| ||||||||||||| || ||||||||| |||||||    
T  3208236 aaaatcgcaactttttaaaacttaggggtcgaaaagtgcagtttag 3208281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 4807908 - 4807859
Alignment:
Q  214 ttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattt 263  Q
    |||||||||||| || ||||||||| ||| |||||||||| |||||||||    
T  4807908 ttaggctaaacttcacttttcgccttttaagtttcaaaatgttgcgattt 4807859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 33895629 - 33895678
Alignment:
Q  469 caaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    |||||| ||||||||||||||  ||| |||||||||||| ||||||||||    
T  33895629 caaaattgcaacattttaaaatatagggggcgaaaagtgcagtttagcct 33895678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 3e-59; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 216 - 518
Target Start/End: Original strand, 4059521 - 4059827
Alignment:
Q  216 aggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaattg 314  Q
    |||||||| |||| |||||||| | ||||||||||||| |||||||||||||  ||||||        | |||||| | ||| |||||||||| ||||||    
T  4059521 aggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggccccctattaaaaaaaattgcaattttggcccctttcatcccaaaattg 4059620  T
Q  315 ctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttat-aggtcaaa 413  Q
    ||||||||||||| | |||| ||||||| || |||||||| || || ||||||||||||||||||||||||||||||||| |||||||||  ||||||||    
T  4059621 ctgagaagacgccacgtgtcccaaaaaatggaccataatcgcaactttttgtaaagataaggggtcaaaaaacatattttccttatgttaggaggtcaaa 4059720  T
Q  414 agagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaataggggtc-aaaatcgcaacattttaaaacttagagggcgaaaagtggagt 511  Q
    |||||||||||||||||||||||   | |||||||||||        |||||||| | |||||||||||||||| ||||||||||||||||||||| |||    
T  4059721 agagcatatttccctaaacatagagggtcacttttgccattttttttaatagggggctaaaatcgcaacattttgaaacttagagggcgaaaagtgaagt 4059820  T
Q  512 ttagcct 518  Q
    |||||||    
T  4059821 ttagcct 4059827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 217 - 519
Target Start/End: Complemental strand, 3617102 - 3616797
Alignment:
Q  217 ggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattgct 316  Q
    ||||||||| || |||||||| | ||||||||||||| |||| ||||| ||  ||||||       | |||||| | ||| |||| ||||  ||||||||    
T  3617102 ggctaaacttcacttttcgccccctatgtttcaaaatgttgcaattttcgccccctattaaataaatagcaattttggccccttttatccaaaaattgct 3617003  T
Q  317 gagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgt-tataggtcaaaag 415  Q
    ||||||||||| | |||| ||||||||||||||||||| || || ||||||||||||||||||||||||||||||||  |||||||  | ||||||||||    
T  3617002 gagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgtgaagaggtcaaaag 3616903  T
Q  416 agcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagttt 513  Q
    ||||||||||||||||||||||| | |||||||||||        |||| |||| ||||||||||||||||| ||||||||||||||||||||| |||||    
T  3616902 agcatatttccctaaacataggaggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagttt 3616803  T
Q  514 agcctt 519  Q
    ||||||    
T  3616802 agcctt 3616797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 216 - 518
Target Start/End: Complemental strand, 24196566 - 24196260
Alignment:
Q  216 aggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaattg 314  Q
    ||||||||||||| |||||||||| ||||||| ||||| |||||||||||||  ||||||        |||||||| | ||| ||||| |||  ||||||    
T  24196566 aggctaaactgcacttttcgcctcctatgttttaaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccctttcgtccaaaaattg 24196467  T
Q  315 ctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaa 413  Q
    ||||||||||||| | |||| |||||||||||||||| || || || |||||||||||||||||||||||| |||||||  |||||||||  ||||||||    
T  24196466 ctgagaagacgccacgtgtcccaaaaaaggggccatattcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaa 24196367  T
Q  414 agagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaatag-gggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagt 511  Q
    |||||||||||| ||||||||| |  | |||||||||||        ||||| ||| ||||||||||||||||| |||||||| ||||||||||||||||    
T  24196366 agagcatatttctctaaacatatggggtcacttttgccattttttttaatagagggccaaaatcgcaacattttgaaacttagggggcgaaaagtggagt 24196267  T
Q  512 ttagcct 518  Q
    |||||||    
T  24196266 ttagcct 24196260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 218 - 517
Target Start/End: Original strand, 43706655 - 43706957
Alignment:
Q  218 gctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaattgct 316  Q
    ||||||||||| |||||||| | ||||||||| ||| |||||||||||||  ||||||        | |||||| | ||| |||||||||| ||||||||    
T  43706655 gctaaactgcacttttcgccccctatgtttcataatgttgcgattttggccccctattaaaaaaaatagcaattttggcccctttcatcccaaaattgct 43706754  T
Q  317 gagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttataggtcaaaaga 416  Q
     |||||| ||| | |||| |  |||||||| ||||||| || || ||||||||||||||||||||||||||||||||  |||||||||| ||||||||||    
T  43706755 cagaagatgccacgtgtcccggaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttatgggtcaaaaga 43706854  T
Q  417 gcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagttta 514  Q
    |||||||||||||||||||||  | |||||||||||        |||| |||| ||||||||||||||||||||| |||| |||| ||||||||||||||    
T  43706855 gcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttaaaaattagggggcaaaaagtggagttta 43706954  T
Q  515 gcc 517  Q
    |||    
T  43706955 gcc 43706957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 309 - 518
Target Start/End: Complemental strand, 24962164 - 24961952
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-tag 407  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||| || || |||||||||||||||||||||||| |||||||  |||||||||  ||    
T  24962164 aaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggag 24962065  T
Q  408 gtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaag 505  Q
    ||||||||||||||||||||||||||||||  | |||||||||||        |||| |||| ||||||| ||||||||| |||||||||||||||||||    
T  24962064 gtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcacaacattttgaaacttagagggcgaaaag 24961965  T
Q  506 tggagtttagcct 518  Q
    || ||||||||||    
T  24961964 tgaagtttagcct 24961952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 283 - 519
Target Start/End: Original strand, 19077992 - 19078229
Alignment:
Q  283 tggcaattctagcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaa 382  Q
    |||||||| | ||| |||||||||  ||||||||||||||||||| | |||| ||||||||||| ||||||| || || |||||||||||||||||||||    
T  19077992 tggcaattttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaa 19078091  T
Q  383 aaaacatatttttcttatgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaata-ggggtcaaaatcgcaac 480  Q
    |||||||||||  |||||||||  ||||||||||||||||||||||||||||||||  | |||||||||||       |||| |||| |||||| |||||    
T  19078092 aaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagg-ggtcacttttgccatttttttaatagggggccaaaattgcaac 19078190  T
Q  481 attttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    ||||| |||| |||||||| ||||||| || ||||||||    
T  19078191 attttgaaacatagagggcaaaaagtgcagcttagcctt 19078229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 283 - 519
Target Start/End: Original strand, 19125882 - 19126119
Alignment:
Q  283 tggcaattctagcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaa 382  Q
    |||||||| | ||| |||||||||  ||||||||||||||||||| | |||| ||||||||||| ||||||| || || |||||||||||||||||||||    
T  19125882 tggcaattttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaa 19125981  T
Q  383 aaaacatatttttcttatgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaata-ggggtcaaaatcgcaac 480  Q
    |||||||||||  |||||||||  ||||||||||||||||||||||||||||||||  | |||||||||||       |||| |||| |||||| |||||    
T  19125982 aaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagg-ggtcacttttgccatttttttaatagggggccaaaattgcaac 19126080  T
Q  481 attttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    ||||| |||| |||||||| ||||||| || ||||||||    
T  19126081 attttgaaacatagagggcaaaaagtgcagcttagcctt 19126119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 218 - 517
Target Start/End: Original strand, 48471864 - 48472165
Alignment:
Q  218 gctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaattgct 316  Q
    |||||| |||| |||||| | | ||||||||||||| |||||||||||||  ||||||        |||||||| | ||| | |||||||| ||||||||    
T  48471864 gctaaagtgcacttttcgtcccctatgtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccccttcatcccaaaattgct 48471963  T
Q  317 gagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaag 415  Q
    ||||||||||| | |||| |||||||||| |||||||| || || |||||||||||||||||||||||| ||||||| ||||||||||  ||||||||||    
T  48471964 gagaagacgccacgtgtcccaaaaaagggaccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttctcttatgttaggaggtcaaaag 48472063  T
Q  416 agcatatttccctaaacataggatgccacttttgcca-nnnnnnnaataggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagttta 514  Q
    ||||||||||||||||||||||  | || ||||||||        ||||||| | ||||| |||| ||||| |||||||||||||||||||||  |||||    
T  48472064 agcatatttccctaaacatagggggtcaattttgccattttttttaatagggct-aaaattgcaatattttgaaacttagagggcgaaaagtgatgttta 48472162  T
Q  515 gcc 517  Q
    |||    
T  48472163 gcc 48472165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 215 - 517
Target Start/End: Original strand, 46432214 - 46432520
Alignment:
Q  215 taggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaatt 313  Q
    ||||||||| |||| |||||||| | ||||||||| ||| |||||||||||||  ||||||        | |||||| | ||| |||||||||| |||||    
T  46432214 taggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttggccccctattaaaaaaaatagcaattttggcccctttcatcccaaaatt 46432313  T
Q  314 gctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaa 412  Q
    |||  ||||| ||| | |||| || |||||||| ||||||| || || ||||||||||||||||||||||||||||||||  |||||||||   ||||||    
T  46432314 gctcggaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaa 46432413  T
Q  413 aagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggag 510  Q
    |||||||||||||||||||||||||  | |||||||||||        |||| |||| ||||||||||||||||| |||||||  ||||||||||||||     
T  46432414 aagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttaaggggcgaaaagtggac 46432513  T
Q  511 tttagcc 517  Q
    |||||||    
T  46432514 tttagcc 46432520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 213 - 518
Target Start/End: Original strand, 51719119 - 51719425
Alignment:
Q  213 tttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaat 312  Q
    |||||||||||||||| ||||||||   ||||||||| ||| |||| ||||||||  ||||||       | |||||| | | | ||||||| || ||||    
T  51719119 tttaggctaaactgcacttttcgccctctatgtttcataatgttgcaattttggccccctattaaaaaaatagcaattttggtccctttcattccaaaat 51719218  T
Q  313 tgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttatagg-tca 411  Q
    |||| |||||| ||| | | ||||| |||||||| ||||||| || || |||||||||||||||||| |||||||||||||| |||||||||  || |||    
T  51719219 tgctcagaagatgccacgtatctcagaaaaggggtcataatcgcaactttttgtaaagataaggggt-aaaaaacatattttccttatgttaggggatca 51719317  T
Q  412 aaagagcatatttccctaaacataggatgccacttttgccannnnnnnaataggg-gtcaaaatcgcaacattttaaaacttagagggcgaaaagtggag 510  Q
    |||||||||||||||||||||||| |  | |||||||||||       ||||||| | ||||||||||||||||| ||||||||  | | ||||||||||    
T  51719318 aaagagcatatttccctaaacataaggggtcacttttgccatttttttaatagggagccaaaatcgcaacattttgaaacttaggtgacaaaaagtggag 51719417  T
Q  511 tttagcct 518  Q
    ||||||||    
T  51719418 tttagcct 51719425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 309 - 509
Target Start/End: Complemental strand, 24750009 - 24749805
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttat-ag 407  Q
    |||||||| |||||||||| | |||  ||||||| ||||||||||| || || |||||||||||||||||||||||| |||||||  |||||||||| ||    
T  24750009 aaattgctaagaagacgccacgtgttccaaaaaatgggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttatgag 24749910  T
Q  408 gtcaaaagagcatatttccctaaacataggatgccacttttgcca--nnnnnnnaatag-gggtcaaaatcgcaacattttaaaacttagagggcgaaaa 504  Q
    ||||||||||||||||||||||||||||||  | |||||||||||         ||||| ||| ||||||||||||||||| ||||||||||| ||||||    
T  24749909 gtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttttaatagtgggccaaaatcgcaacattttgaaacttagaggacgaaaa 24749810  T
Q  505 gtgga 509  Q
    |||||    
T  24749809 gtgga 24749805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 298 - 518
Target Start/End: Original strand, 28920738 - 28920956
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaa-ggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttc 396  Q
    |||||||||  ||||||||||||||||||| |||||| ||||||| |||||||||||| |  || |||||||||||||||||||||||| ||||          
T  28920738 ctttcatccaaaaattgctgagaagacgccacatgtcccaaaaaagggggccataatcgccactttttgtaaagataaggggtcaaaaagcata------ 28920831  T
Q  397 ttatgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaactta 493  Q
    ||||||||  ||||||||||||||||||||||||||||||||  | |||||||||||        |||| |||| ||||||||||||||||| |||||||    
T  28920832 ttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaactta 28920931  T
Q  494 gagggcgaaaagtggagtttagcct 518  Q
    | |||||||||||| ||||||||||    
T  28920932 gggggcgaaaagtgaagtttagcct 28920956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 213 - 517
Target Start/End: Complemental strand, 2425531 - 2425225
Alignment:
Q  213 tttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaat 312  Q
    |||||||||||||||| |||| ||| | ||||||||| ||| |||||||||||||  ||||||       | |||||| | |||  ||||||||| ||||    
T  2425531 tttaggctaaactgcactttttgccccctatgtttcataatgttgcgattttggccccctattaaaaaaatagcaattttggcccatttcatcccaaaat 2425432  T
Q  313 tgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggt-caaaaaacatatttttcttatgttata-ggtc 410  Q
    |||| |||||| ||| | |||| || |||| ||| ||||||| || || |||||||||||||||| |  |||||||||||||  ||||||||| | ||||    
T  2425431 tgctcagaagatgccacgtgtcccagaaaatgggtcataatcgcaactttttgtaaagataagggttaaaaaaaacatatttcccttatgttagagggtc 2425332  T
Q  411 aaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtgg 508  Q
    ||||||||||| |||||||||||||||  | |||||||||||        |||| |||||||||||||||||||||| ||||||||  ||| ||||||||    
T  2425331 aaaagagcata-ttccctaaacatagg-ggtcacttttgccattttttttaatagggggtcaaaatcgcaacattttgaaacttaggtggcaaaaagtgg 2425234  T
Q  509 agtttagcc 517  Q
    |||||||||    
T  2425233 agtttagcc 2425225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 213 - 433
Target Start/End: Original strand, 27092849 - 27093070
Alignment:
Q  213 tttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaa 311  Q
    |||||||||||||||| || ||||| | ||||||||||||| || ||||||||||  ||||||        |||||||| | |||  ||||||||| |||    
T  27092849 tttaggctaaactgcacttctcgccccctatgtttcaaaatgttacgattttggcc-cctattaaaaaaaatggcaattttggcccatttcatcccaaaa 27092947  T
Q  312 ttgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtc 410  Q
    |||||||||||||||| | |||  ||||||||||||||||||  || || ||||||||||||||||||||||||||||||||  | ||| |||   ||||    
T  27092948 ttgctgagaagacgccacgtgttccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaaacatatttcacatatattagggggtc 27093047  T
Q  411 aaaagagcatatttccctaaaca 433  Q
    |||||||||||||||||||||||    
T  27093048 aaaagagcatatttccctaaaca 27093070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 309 - 518
Target Start/End: Complemental strand, 29676290 - 29676078
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-tag 407  Q
    |||||| ||||||| |||| | |||| ||||||||||||||||||| || || ||| |||||||||||||||||||| |||||||  |||||||||  ||    
T  29676290 aaattgttgagaaggcgccacgtgtcccaaaaaaggggccataatcgcaactttttataaagataaggggtcaaaaagcatatttcacttatgttaggag 29676191  T
Q  408 gtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaag 505  Q
     ||| |||||||||||||||||||||||||    ||||||||| |        |||| |||| | |||| |||||||||| |||||||||||||||||||    
T  29676190 atcacaagagcatatttccctaaacataggggatcacttttgctattctttttaatatggggcctaaattgcaacattttgaaacttagagggcgaaaag 29676091  T
Q  506 tggagtttagcct 518  Q
    || ||||||||||    
T  29676090 tgaagtttagcct 29676078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 309 - 517
Target Start/End: Complemental strand, 22786238 - 22786031
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttcttatgttatag 407  Q
    |||||||||||||||||||   |||| ||||| ||||||||| |   || || ||||  ||||||||||||||||| | |||||||  ||||||||| |     
T  22786238 aaattgctgagaagacgccaagtgtcccaaaacaggggccatca---caactttttgagaagataaggggtcaaaagatcatatttcacttatgttagat 22786142  T
Q  408 gtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaataggggtcaaaatcgcaacattttaaaacttagagggcgaaaagt 506  Q
    ||||||||||||||||||||||||||| ||    |||||||||||        |||||||||||||||||||||||||||||||||||  ||| ||| ||    
T  22786141 gtcaaaagagcatatttccctaaacatgggggctcacttttgccattttttttaataggggtcaaaatcgcaacattttaaaacttaggaggcaaaaggt 22786042  T
Q  507 ggagtttagcc 517  Q
    | |||||||||    
T  22786041 gcagtttagcc 22786031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 294 - 435
Target Start/End: Original strand, 29182078 - 29182220
Alignment:
Q  294 gcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatt 392  Q
    ||||||||| || | ||||||||||||||||||  | |||||||||||| ||||||||||| || || | ||  ||||||||||||||||| | ||||||    
T  29182078 gcctctttcgtctcaaaattgctgagaagacgcaacgtgtctcaaaaaatgggccataatcgcaactttatgagaagataaggggtcaaaagatcatatt 29182177  T
Q  393 tttcttatgttataggtcaaaagagcatatttccctaaacata 435  Q
    |  |||||||||  ||||||||||||||||||| |||||||||    
T  29182178 tcccttatgttaggggtcaaaagagcatatttctctaaacata 29182220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 304 - 518
Target Start/End: Original strand, 2657601 - 2657816
Alignment:
Q  304 tcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttcttatgt 402  Q
    |||| |||||| |||||| ||||| | ||||  |||||| ||| ||||||| || || |||  |||||||||||||||||| | |||||||  |||||||    
T  2657601 tcccaaaattgttgagaa-acgccacgtgtcctaaaaaaagggtcataatcacaacttttttaaaagataaggggtcaaaagagcatatttc-cttatgt 2657698  T
Q  403 tata-ggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnn-aataggggtcaaaatcgcaacattttaaaacttagagggcg 500  Q
    ||   |||||| ||||||||||||||||||||||||  | |||||||||||        |||||||||||||||||||| ||||| |||||||| |||||    
T  2657699 taggcggtcaatagagcatatttccctaaacatagggagtcacttttgccattttttttaataggggtcaaaatcgcaatattttgaaacttagggggcg 2657798  T
Q  501 aaaagtggagtttagcct 518  Q
    ||||||| ||||||||||    
T  2657799 aaaagtgtagtttagcct 2657816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 298 - 452
Target Start/End: Original strand, 16551725 - 16551881
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttttc 396  Q
    ||||| |||| ||||||||||||||||||| | |||| ||||| | ||||||||||| || || ||||  ||||||||||||||||| | ||||||| ||    
T  16551725 ctttcgtcccaaaattgctgagaagacgccacgtgtcccaaaacaagggccataatcgcaactttttgagaagataaggggtcaaaagatcatatttgtc 16551824  T
Q  397 ttatgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgcca 452  Q
    | ||||||   |||||||||||||||||||||||||||| ||  | |||||||||||    
T  16551825 tgatgttagggggtcaaaagagcatatttccctaaacattgggggtcacttttgcca 16551881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 310 - 518
Target Start/End: Original strand, 18606777 - 18606988
Alignment:
Q  310 aattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttcttatgttatagg 408  Q
    |||||||||| ||||||  | |||| ||||| | |||  |||||| || || ||||  ||||||||||||||||| | | |||||| |||||||||| ||    
T  18606777 aattgctgagcagacgctacgtgtcccaaaacaagggtgataatcacaactttttgagaagataaggggtcaaaagatcgtattttccttatgttatggg 18606876  T
Q  409 -tcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagt 506  Q
     ||||||||||||||||||||||||||  |  | ||||||| |||       |||| |||||||||||| |||||||||||||||||| || ||||||||    
T  18606877 gtcaaaagagcatatttccctaaacatgaggggtcactttttccagttttttaatagggggtcaaaatcacaacattttaaaacttaggggtcgaaaagt 18606976  T
Q  507 ggagtttagcct 518  Q
    | ||||||||||    
T  18606977 gtagtttagcct 18606988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 309 - 434
Target Start/End: Complemental strand, 47685312 - 47685186
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttatagg 408  Q
    |||||||| |||||||||| | ||||  ||||||| || ||| ||| || || ||||||||| ||||||||||||||||||||||| |||||||||  ||    
T  47685312 aaattgctaagaagacgccacgtgtcctaaaaaagaggtcattatcgcaactttttgtaaaggtaaggggtcaaaaaacatattttccttatgttagggg 47685213  T
Q  409 -tcaaaagagcatatttccctaaacat 434  Q
     |||||| ||||||||||| |||||||    
T  47685212 atcaaaatagcatatttccttaaacat 47685186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 299 - 434
Target Start/End: Original strand, 4455125 - 4455262
Alignment:
Q  299 tttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttct 397  Q
    |||| |||| ||||||||||||||| ||| |||||| |||||||  |||||||||| || || ||||  |||||||| |||||||||| |||||||  ||    
T  4455125 tttcgtcccaaaattgctgagaagatgccacatgtcccaaaaaaatggccataatcgcaactttttgagaagataagtggtcaaaaaatcatatttccct 4455224  T
Q  398 tatgtta-taggtcaaaagagcatatttccctaaacat 434  Q
    |||||||   |||||||||||||||||| |||||||||    
T  4455225 tatgttacggggtcaaaagagcatattttcctaaacat 4455262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 16972107 - 16972155
Alignment:
Q  470 aaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  16972107 aaaatcgcaacattttaaaacttagggggcgaaaagtgcagtttagcct 16972155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 464 - 516
Target Start/End: Complemental strand, 50334771 - 50334719
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagc 516  Q
    |||| |||||| ||||||||||||||||||| |||||||||||||||||||||    
T  50334771 ggggccaaaattgcaacattttaaaacttagggggcgaaaagtggagtttagc 50334719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 309 - 434
Target Start/End: Complemental strand, 21185414 - 21185290
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttcttatgttatag 407  Q
    |||||||||||||| |||| | |||  |||||||||| | |||||| || || ||||  |||||| |||||||||| | |||||||| |||||||||  |    
T  21185414 aaattgctgagaagccgcctcgtgttccaaaaaagggtc-ataatcgcaactttttgagaagatagggggtcaaaagatcatatttt-cttatgttaagg 21185317  T
Q  408 gtcaaaagagcatatttccctaaacat 434  Q
    ||||||||| |||||||||||||||||    
T  21185316 gtcaaaagaacatatttccctaaacat 21185290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 460 - 517
Target Start/End: Original strand, 6285453 - 6285510
Alignment:
Q  460 aataggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcc 517  Q
    ||||||||||||||||| || ||||||||||||||| ||||||||||| | |||||||    
T  6285453 aataggggtcaaaatcgtaaaattttaaaacttagaaggcgaaaagtgcactttagcc 6285510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 309 - 434
Target Start/End: Original strand, 26605370 - 26605494
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttatagg 408  Q
    |||||||| |||||||||  | |||| |||||||  |  |||||||  | || |||||||| |||||   |||||||||||||||| |||||||||  ||    
T  26605370 aaattgctaagaagacgctacgtgtcccaaaaaatcgatcataatcgtaactttttgtaaaaataagatatcaaaaaacatatttt-cttatgttagggg 26605468  T
Q  409 tcaaaagagcatatttccctaaacat 434  Q
    |||||| |||||||||||||||||||    
T  26605469 tcaaaatagcatatttccctaaacat 26605494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 463 - 519
Target Start/End: Original strand, 24750019 - 24750075
Alignment:
Q  463 aggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    ||||| |||||| ||||||||||||||| ||| |||||||||||| |||||||||||    
T  24750019 aggggccaaaattgcaacattttaaaacatagggggcgaaaagtgcagtttagcctt 24750075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 470 - 517
Target Start/End: Complemental strand, 2657560 - 2657513
Alignment:
Q  470 aaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcc 517  Q
    |||||||||||||||||||||||| ||||||||||||| |||| ||||    
T  2657560 aaaatcgcaacattttaaaacttaaagggcgaaaagtgaagttaagcc 2657513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 217 - 384
Target Start/End: Original strand, 9554201 - 9554369
Alignment:
Q  217 ggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaattgc 315  Q
    ||||||| ||||||||| | ||| || |||||||||| || |||||||||| |||||||        | |||||| | || |||||| |||| ||||||     
T  9554201 ggctaaaatgcattttttgtctcctaagtttcaaaatgtttcgattttggcctcctattaaaaagaatagcaattttggcttctttcgtcccaaaattgt 9554300  T
Q  316 tgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa 384  Q
     |||||| |||| | |||||||||| |||||||||| || || || ||||  |||||||||||||||||    
T  9554301 agagaaggcgccacgtgtctcaaaacaggggccatagtcgcaactttttgagaagataaggggtcaaaa 9554369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 464 - 519
Target Start/End: Original strand, 14601743 - 14601798
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    ||||||||||||||||||||||||||||||| ||| |||||  | |||||||||||    
T  14601743 ggggtcaaaatcgcaacattttaaaacttagggggtgaaaaacgcagtttagcctt 14601798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 460 - 519
Target Start/End: Original strand, 19563270 - 19563328
Alignment:
Q  460 aataggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    ||||||||||||||| |||||||||||||||||| ||||| ||||||| |||| ||||||    
T  19563270 aataggggtcaaaattgcaacattttaaaactta-agggcaaaaagtgcagttcagcctt 19563328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 464 - 519
Target Start/End: Original strand, 24196512 - 24196567
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    |||| |||||||||||||||||||||| |||  ||||||||||| |||||||||||    
T  24196512 ggggccaaaatcgcaacattttaaaacataggaggcgaaaagtgcagtttagcctt 24196567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 329 - 404
Target Start/End: Original strand, 31084725 - 31084800
Alignment:
Q  329 catgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta 404  Q
    |||||| |||||| |||| |||||||  | || |||||||||||||||||||||||| |||||||| | |||||||    
T  31084725 catgtcccaaaaagggggtcataatcgaaactttttgtaaagataaggggtcaaaaagcatattttccatatgtta 31084800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 315 - 384
Target Start/End: Complemental strand, 16858536 - 16858466
Alignment:
Q  315 ctgagaagacgccgcatgtctcaaaaaaggggccataatc-ccacctctttgtaaagataaggggtcaaaa 384  Q
    |||||||| |||| |||||| ||||||||||||||||||| | || | ||||||||||||||||| |||||    
T  16858536 ctgagaagccgccacatgtcccaaaaaaggggccataatcgcaacttttttgtaaagataaggggccaaaa 16858466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 216 - 266
Target Start/End: Original strand, 31084615 - 31084665
Alignment:
Q  216 aggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttgg 266  Q
    |||||||||| || ||||||||||||| |||| ||||||||||||||||||    
T  31084615 aggctaaactacacttttcgcctcttaagttttaaaatattgcgattttgg 31084665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 368 - 517
Target Start/End: Complemental strand, 10684946 - 10684794
Alignment:
Q  368 aagataaggggtcaaaaaa-catatttttcttatgttatagg--tcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaatag 464  Q
    ||||||||||||||||| | ||||||||||||||||||  ||  |||| |||| ||||||||||||||| | |  | |||||||||||       |||||    
T  10684946 aagataaggggtcaaaagatcatatttttcttatgttaggggggtcaatagagtatatttccctaaaca-atggggtcacttttgccatttttttaatag 10684848  T
Q  465 gggtc-aaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcc 517  Q
    ||| | ||||| ||||||||||||||||||  ||||||||| |  |||||||||    
T  10684847 gggactaaaattgcaacattttaaaacttaaggggcgaaaaatacagtttagcc 10684794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 470 - 514
Target Start/End: Complemental strand, 4455089 - 4455045
Alignment:
Q  470 aaaatcgcaacattttaaaacttagagggcgaaaagtggagttta 514  Q
    ||||||||||||||||||||||||| || ||||||||| ||||||    
T  4455089 aaaatcgcaacattttaaaacttaggggtcgaaaagtgcagttta 4455045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 464 - 516
Target Start/End: Complemental strand, 16551697 - 16551645
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagc 516  Q
    |||| |||||| |||||||||| ||||||||||||||||||||| || |||||    
T  16551697 ggggccaaaattgcaacattttgaaacttagagggcgaaaagtgcagattagc 16551645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 309 - 434
Target Start/End: Original strand, 2260471 - 2260598
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttttcttatgttat-a 406  Q
    ||||| ||||||||||||| | | || ||||||||||| || |||| || || ||||  |||||||||||| |||| | |||||||  ||||| ||||      
T  2260471 aaattactgagaagacgccacgtatcccaaaaaaggggtcagaatcgcaactttttgagaagataaggggttaaaatatcatatttcccttatattatgg 2260570  T
Q  407 ggtcaaaagagcatatttccctaaacat 434  Q
    |||||||| |||||||||| ||||||||    
T  2260571 ggtcaaaaaagcatatttcactaaacat 2260598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 2657818 - 2657767
Alignment:
Q  214 ttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttg 265  Q
    |||||||||||| || |||||||| | || ||||||||||||||||||||||    
T  2657818 ttaggctaaactacacttttcgccccctaagtttcaaaatattgcgattttg 2657767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 519
Target Start/End: Complemental strand, 4059575 - 4059520
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    |||| ||||||||||||||||| |||| ||| |||||||||||| | |||||||||    
T  4059575 ggggccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcctt 4059520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 519
Target Start/End: Original strand, 21148198 - 21148253
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    |||| ||||||||||||||||||||| |||| || ||||||||| |||||| ||||    
T  21148198 ggggccaaaatcgcaacattttaaaatttaggggtcgaaaagtgcagtttatcctt 21148253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 407 - 437
Target Start/End: Complemental strand, 21148090 - 21148060
Alignment:
Q  407 ggtcaaaagagcatatttccctaaacatagg 437  Q
    |||||||||||||||||||||||||||||||    
T  21148090 ggtcaaaagagcatatttccctaaacatagg 21148060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 469 - 507
Target Start/End: Complemental strand, 28552353 - 28552315
Alignment:
Q  469 caaaatcgcaacattttaaaacttagagggcgaaaagtg 507  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  28552353 caaaatcgcaacattttgaaacttagggggcgaaaagtg 28552315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 469 - 519
Target Start/End: Complemental strand, 31084664 - 31084614
Alignment:
Q  469 caaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    ||||||||||| |||||||||||||   ||||||||||| |||||||||||    
T  31084664 caaaatcgcaatattttaaaacttaagaggcgaaaagtgtagtttagcctt 31084614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 518
Target Start/End: Complemental strand, 51719176 - 51719122
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    |||| |||||| |||||||| | |||| |||||||||||||||| ||||||||||    
T  51719176 ggggccaaaattgcaacattatgaaacatagagggcgaaaagtgcagtttagcct 51719122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 526
Target Start/End: Complemental strand, 2260426 - 2260369
Alignment:
Q  469 caaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagccttgaattta 526  Q
    |||||||||||||||||||||||||  || ||||||||| | ||||||| | ||||||    
T  2260426 caaaatcgcaacattttaaaacttaagggtcgaaaagtgcactttagccataaattta 2260369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 26605573 - 26605528
Alignment:
Q  220 taaactgcatttttcgcctcttatgtttcaaaatattgcgattttg 265  Q
    ||||||||| ||||||||||||| |||| |||||||| ||||||||    
T  26605573 taaactgcacttttcgcctcttaagttttaaaatattacgattttg 26605528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 267
Target Start/End: Complemental strand, 28920958 - 28920905
Alignment:
Q  214 ttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggc 267  Q
    |||||||||||| || |||||||| | || |||||||||| |||||||||||||    
T  28920958 ttaggctaaacttcacttttcgccccctaagtttcaaaatgttgcgattttggc 28920905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 114; Significance: 2e-57; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 217 - 517
Target Start/End: Original strand, 2961 - 3264
Alignment:
Q  217 ggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattgct 316  Q
    ||||||| |||| |||||||| | ||||||||||||| |||||||||||||  ||||||       |||||||| | ||| | |||||||| |||||| |    
T  2961 ggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggccccctattaaaaaaatggcaattttggcccccttcatcccaaaattgat 3060  T
Q  317 gagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaag 415  Q
    ||||||||||| | |||| |||||||| |||||||||  || || |||||||||||||| |||||||||||||||||  |||||||||  ||||||||||    
T  3061 gagaagacgccacgtgtcccaaaaaagaggccataattgcaactttttgtaaagataagaggtcaaaaaacatatttcccttatgttaggaggtcaaaag 3160  T
Q  416 agcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagttt 513  Q
    ||||||||||||||||||||||| | |||||||||||        |||| ||||||||||| |||||||||| |||||||||||||||||||||  ||||    
T  3161 agcatatttccctaaacataggaggtcacttttgccattttttttaatagggggtcaaaattgcaacattttgaaacttagagggcgaaaagtgaggttt 3260  T
Q  514 agcc 517  Q
    ||||    
T  3261 agcc 3264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 464 - 517
Target Start/End: Complemental strand, 3014 - 2961
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcc 517  Q
    |||| ||||||||||||||||| |||| ||| |||||||||||| | |||||||    
T  3014 ggggccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 2961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 8e-57; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 283 - 518
Target Start/End: Original strand, 5304414 - 5304650
Alignment:
Q  283 tggcaattctagcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaa 382  Q
    |||||||| | ||| | |||||| | ||||||||||||||||||| | |||| ||||||| ||||||||||| || || |||||||||||||||||||||    
T  5304414 tggcaattttggcccccttcatcgcaaaattgctgagaagacgccacgtgtcccaaaaaatgggccataatcgcaactttttgtaaagataaggggtcaa 5304513  T
Q  383 aaaacatatttttcttatgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaatag-gggtcaaaatcgcaac 480  Q
    ||| |||||||| |||||||||  ||||||||||||||||||||||||||||||||  | |||||||||||       ||||| ||||||||||||||||    
T  5304514 aaagcatattttccttatgttaggaggtcaaaagagcatatttccctaaacatagg-ggtcacttttgccatttttttaatagagggtcaaaatcgcaac 5304612  T
Q  481 attttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  5304613 attttgaaacttagagggcgaaaagtgaagtttagcct 5304650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 215 - 518
Target Start/End: Original strand, 43793629 - 43793935
Alignment:
Q  215 taggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaatt 313  Q
    |||||||||||||| |||||||| | ||||||| ||||| |||||||||||||  ||||||        |||||||| | |||  |||| |||| |||||    
T  43793629 taggctaaactgcacttttcgccccctatgttttaaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccatttcgtcccaaaatt 43793728  T
Q  314 gctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaa 412  Q
    |||||||||||||| |||||| ||||||||||| |||| || || || |||||||| |||||||||||||||||||||||  |||||||||  |||||||    
T  43793729 gctgagaagacgccacatgtcccaaaaaaggggtcatattcgcaactttttgtaaatataaggggtcaaaaaacatatttcccttatgttaggaggtcaa 43793828  T
Q  413 aagagcatatttccctaaacataggatgccacttttgccannnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagt 511  Q
    ||||||||||||||||||||||| |  | |||||||||||       |||| |||| ||||||||||||||||| ||||||||  ||| |||||||||||    
T  43793829 aagagcatatttccctaaacatatggggtcacttttgccatttttttaatagggggccaaaatcgcaacattttgaaacttaggcggcaaaaagtggagt 43793928  T
Q  512 ttagcct 518  Q
    |||||||    
T  43793929 ttagcct 43793935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 216 - 519
Target Start/End: Original strand, 15058819 - 15059123
Alignment:
Q  216 aggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattgc 315  Q
    |||||||| |||| |||| ||| | ||||||||||||| |||||||||||||  ||||||       |||||| | | ||| |||||||||| |||||||    
T  15058819 aggctaaagtgcacttttggccccctatgtttcaaaatgttgcgattttggcc-cctattaaaaatatggcaactttggcccctttcatcccaaaattgc 15058917  T
Q  316 tgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaa 414  Q
    |||||||||||| | |||| |||||||||||| |||||| || || |||||||||||||||||||||||| |||||||  |||||||||  |||||||||    
T  15058918 tgagaagacgccacgtgtcccaaaaaaggggctataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaa 15059017  T
Q  415 gagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaataggggtcaaaatcgcaacatttt-aaaacttagagggcgaaaagtggagtt 512  Q
    |||||||||||||||||||||||  | |||||||||||        |||||||| | ||||||||||||||| |||||||||||| ||||||||| ||||    
T  15059018 gagcatatttccctaaacatagggggtcacttttgccattttttttaatagggg-ccaaatcgcaacattttcaaaacttagaggacgaaaagtgaagtt 15059116  T
Q  513 tagcctt 519  Q
    || ||||    
T  15059117 taacctt 15059123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 299 - 518
Target Start/End: Complemental strand, 35475510 - 35475290
Alignment:
Q  299 tttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttctt 398  Q
    ||||||||  ||||||||||||||||||| | |||| ||||||||||| ||||||| |  || ||||||||||||||||||||||||||||||||  |||    
T  35475510 tttcatcctaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgctactttttgtaaagataaggggtcaaaaaacatatttccctt 35475411  T
Q  399 atgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaataggg-gtcaaaatcgcaacattttaaaacttaga 495  Q
    ||||||  ||||||||||||||||||||||||||||||||  | |||||||||||        ||||||| | |||||||||||||||||||||||||||    
T  35475410 atgttaggaggtcaaaagagcatatttccctaaacatagg--gtcacttttgccattttttttaatagggagccaaaatcgcaacattttaaaacttaga 35475313  T
Q  496 gggcgaaaagtggagtttagcct 518  Q
    ||||||||| || ||||||||||    
T  35475312 gggcgaaaaatgaagtttagcct 35475290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 300 - 519
Target Start/End: Original strand, 13397759 - 13397981
Alignment:
Q  300 ttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttctta 399  Q
    |||||||  ||||||||||||||||||| | |||| ||||||||||||||||||| || || |||||||||||||||||||||||| |||||||  ||||    
T  13397759 ttcatccgaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttccctta 13397858  T
Q  400 tgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagag 496  Q
    |||||  ||||||||||||||||||||||||||||||||  | |||||||||||        |||| |||| |||||| |||| ||||| ||||||||||    
T  13397859 tgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaattgcaatattttgaaacttagag 13397958  T
Q  497 ggcgaaaagtggagtttagcctt 519  Q
    ||||||||||| |||||||||||    
T  13397959 ggcgaaaagtgaagtttagcctt 13397981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 220 - 517
Target Start/End: Complemental strand, 4357552 - 4357252
Alignment:
Q  220 taaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattgctgag 319  Q
    |||| |||| |||||||| | ||| ||||||||| ||||||||||| |  ||||||       |||||||| | ||| | ||||| |  |||||||||||    
T  4357552 taaagtgcacttttcgccccctatatttcaaaatgttgcgattttgaccccctattaaaaaaatggcaattttggcccccttcattctaaaattgctgag 4357453  T
Q  320 aagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaagagc 418  Q
    ||||||||   |||| ||||||| ||||||||||| || || |||||||||||||||||||||||| |||||||  |||||||||  |||||||||||||    
T  4357452 aagacgccaggtgtcccaaaaaaagggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagaaggtcaaaagagc 4357353  T
Q  419 atatttccctaaacataggatgccacttttgcca-nnnnnnnaataggg-gtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagc 516  Q
    ||||||||||||| ||||| || |||||||||||        ||||||| |  |||||||||||||||| ||||||||||||||||||||| ||||||||    
T  4357352 atatttccctaaatatagggtgtcacttttgccattttttttaatagggagctaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagc 4357253  T
Q  517 c 517  Q
    |    
T  4357252 c 4357252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 215 - 437
Target Start/End: Original strand, 13826418 - 13826641
Alignment:
Q  215 taggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattg 314  Q
    ||||||||| |||| |||||||| | ||||||| ||||| ||||||||||| |  ||||||       |||||||| | ||| |||||||||| ||||||    
T  13826418 taggctaaagtgcacttttcgccccctatgtttaaaaatgttgcgattttgaccccctattaaaaaaatggcaattttggcccctttcatcccaaaattg 13826517  T
Q  315 ctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaa 413  Q
    ||||||||||||| | |||| |||||||||||| |||||| || || |||||||||||||||||||||||| |||||||  |||||||||  ||||||||    
T  13826518 ctgagaagacgccacgtgtcccaaaaaaggggctataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaa 13826617  T
Q  414 agagcatatttccctaaacatagg 437  Q
    |||||||||||||| |||||||||    
T  13826618 agagcatatttcccgaaacatagg 13826641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 216 - 517
Target Start/End: Complemental strand, 25012039 - 25011735
Alignment:
Q  216 aggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattgc 315  Q
    ||||||||||||| |||||||| | ||||||||| ||| |||| ||||||||  ||||||       | |||||| | ||| ||||||| || |||||||    
T  25012039 aggctaaactgcacttttcgccccctatgtttcataatgttgcaattttggccccctattaaaaaaatagcaattttggcccctttcattccaaaattgc 25011940  T
Q  316 tgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaa 414  Q
    | |||||| ||| | |||| ||||||||||  |||||||||| || ||||||||||||||||||||||||||||||    |||||||||   ||||||||    
T  25011939 tcagaagatgccacgtgtcccaaaaaagggatcataatcccaactttttgtaaagataaggggtcaaaaaacatatcccccttatgttagggggtcaaaa 25011840  T
Q  415 gagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtt 512  Q
    |||||||||||||||||||||||  | |||||||||||        |||| |||| ||||||||||||||||| |||||||| || ||||||||||||||    
T  25011839 gagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttaggggacgaaaagtggagtt 25011740  T
Q  513 tagcc 517  Q
    |||||    
T  25011739 tagcc 25011735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 311 - 517
Target Start/End: Complemental strand, 52838436 - 52838231
Alignment:
Q  311 attgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttat-aggt 409  Q
    ||||||||||||||| | | ||||||||||||||| |||||||| || || |||||||||||||||| ||||||| |||||||  | |||||||  ||||    
T  52838436 attgctgagaagacgacacgtgtctcaaaaaagggaccataatcgcaactttttgtaaagataaggg-tcaaaaagcatatttcccgtatgttaggaggt 52838338  T
Q  410 caaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaataggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtgga 509  Q
    ||||||||||||||||| ||||||||||  | || ||||||||       ||||| |||||||||||||||||||||||||||||||||||||||||| |    
T  52838337 caaaagagcatatttcc-taaacatagggggtcatttttgccatttttttaatagaggtcaaaatcgcaacattttaaaacttagagggcgaaaagtgaa 52838239  T
Q  510 gtttagcc 517  Q
    ||||||||    
T  52838238 gtttagcc 52838231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 299 - 517
Target Start/End: Original strand, 4433266 - 4433485
Alignment:
Q  299 tttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttctt 398  Q
    ||||||||| |||||||| | |||| ||| | ||||  | |||||||| ||||||| || || ||||||||||||||||||||||||||||||||| |||    
T  4433266 tttcatcccaaaattgctcataagatgccacgtgtcctagaaaaggggtcataatcacaactttttgtaaagataaggggtcaaaaaacatattttcctt 4433365  T
Q  399 atgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgcc-annnnnnnaataggggtcaaaatcgcaacattttaaaacttagag 496  Q
    ||||||   |||||||||||||||||||||||||||||||  | ||||||||||         |||||||| |||||||||||||||||||||||||| |    
T  4433366 atgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgcctttttttttaataggggccaaaatcgcaacattttaaaacttag-g 4433464  T
Q  497 ggcgaaaagtggagtttagcc 517  Q
    ||||||||||| |||||||||    
T  4433465 ggcgaaaagtgaagtttagcc 4433485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 339 - 518
Target Start/End: Original strand, 9195787 - 9195967
Alignment:
Q  339 aaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttataggtcaaaagagcatatttccctaaacatagga 438  Q
    |||||||| ||||||| || || ||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||     
T  9195787 aaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttatgggtcaaaagagcatatttccctaaacataggg 9195886  T
Q  439 tgccacttttgccannnnnnnaatagggg-tcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
     | |||||||| ||       ||||||||  ||||||||||||||||| ||| |||| ||||||||||||| |||||||||    
T  9195887 ggtcacttttgtcatttttttaataggggaccaaaatcgcaacattttgaaatttagggggcgaaaagtggtgtttagcct 9195967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 309 - 518
Target Start/End: Original strand, 41877121 - 41877329
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttat-ag 407  Q
    |||||||||| |||||||| | ||||  |||||||||| ||||||| || ||  ||||||||||||||||||||||| |||||||  |||||||||  ||    
T  41877121 aaattgctgaaaagacgccacgtgtcctaaaaaaggggtcataatcgcaact--ttgtaaagataaggggtcaaaaagcatatttcccttatgttaggag 41877218  T
Q  408 gtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaataggg-gtcaaaatcgcaacattttaaaacttagagggcgaaaagt 506  Q
    ||||||||||||||||||||||||||||||  | |||||||||||       ||||||| | ||||||||||||||||| ||||||||||||||||||||    
T  41877219 gtcaaaagagcatatttccctaaacatagggggtcacttttgcca-ttttttaatagggagccaaaatcgcaacattttgaaacttagagggcgaaaagt 41877317  T
Q  507 ggagtttagcct 518  Q
    | ||||||||||    
T  41877318 gaagtttagcct 41877329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 216 - 518
Target Start/End: Original strand, 1588414 - 1588717
Alignment:
Q  216 aggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattgc 315  Q
    |||||||| ||||||||||| |  |||||||| ||||||||||||||||| |  | ||||       |||||||| | |||  |||| | || ||| |||    
T  1588414 aggctaaattgcatttttcgtcctttatgttttaaaatattgcgattttgcccccttattaaaaaaatggcaattttggcccttttctttccaaaactgc 1588513  T
Q  316 tgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttataggtcaaaag 415  Q
    | |||||||| | | |||| |||||| | ||| |||||| || || ||||||||||||||||||||||||||||||||  |||||||||  |||||||||    
T  1588514 taagaagacgtcacgtgtcccaaaaa-gaggctataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggggtcaaaag 1588612  T
Q  416 agcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagttt 513  Q
    ||||||||||||||||||||||| | ||||||| |||        |||| | ||  ||||||||||||||||||||||||  || |||||||||||||||    
T  1588613 agcatatttccctaaacataggaggtcactttttccatttttttaaatatgaggcgaaaatcgcaacattttaaaacttaagggacgaaaagtggagttt 1588712  T
Q  514 agcct 518  Q
    |||||    
T  1588713 agcct 1588717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 299 - 513
Target Start/End: Complemental strand, 27018435 - 27018221
Alignment:
Q  299 tttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttctt 398  Q
    ||||||||| ||||||||||||||||||| | |||| ||||||||||||||||||  || || ||||||| ||||||||||||||||||||||||  |||    
T  27018435 tttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaggataaggggtcaaaaaacatatttccctt 27018336  T
Q  399 atgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaataggggtcaaaatcgcaacattttaaaacttagagg 497  Q
     |||||   ||||||||||||||||||||||||||||| |  | |||||||||||           |||||||||||||||||||||||||| ||||  |    
T  27018335 ttgttagggggtcaaaagagcatatttccctaaacatatg-ggtcacttttgccattttttattagggggtcaaaatcgcaacattttaaaatttaggag 27018237  T
Q  498 gcgaaaagtggagttt 513  Q
    ||||||||| ||||||    
T  27018236 gcgaaaagttgagttt 27018221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 220 - 519
Target Start/End: Original strand, 6788961 - 6789264
Alignment:
Q  220 taaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaattgctga 318  Q
    |||| |||| ||||| |||| ||||||| ||||||||||||||||| |  ||||||        |||||||| | ||| | |||||||| |||||||| |    
T  6788961 taaagtgcacttttcacctcctatgttttaaaatattgcgattttgtccccctattaaaaaaaatggcaattttggcccccttcatcccaaaattgctaa 6789060  T
Q  319 gaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaagag 417  Q
    ||||||||| | |||| ||||||| ||| ||||||| ||  | ||||||||||||| |||||||||||||| ||| ||| ||||||  ||||| ||| ||    
T  6789061 gaagacgccacgtgtcccaaaaaaaggggcataatcgcaattttttgtaaagataacgggtcaaaaaacatttttctctcatgttaggaggtcgaaacag 6789160  T
Q  418 catatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttag 515  Q
    ||||||||||||||||||||  | |||||||||||        || | |||| ||||||||||||||||| ||||||| ||||||||||||| |||||||    
T  6789161 catatttccctaaacatagggggtcacttttgccattttatttaacagggggccaaaatcgcaacattttgaaacttaaagggcgaaaagtgaagtttag 6789260  T
Q  516 cctt 519  Q
    ||||    
T  6789261 cctt 6789264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 339 - 518
Target Start/End: Complemental strand, 55780567 - 55780386
Alignment:
Q  339 aaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttataggtcaaaagagcatatttccctaaacatagga 438  Q
    |||||||| ||||||| || || ||||||||||||||||||||||||||||||||| |||| ||||  |||||||||||||||||||||||||||||||     
T  55780567 aaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatattttccttaggttaggggtcaaaagagcatatttccctaaacataggg 55780468  T
Q  439 tgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
     | |||||||||||        |||| |||| |||||||||||||||| ||||||||  ||||||||| || ||||||||||    
T  55780467 ggtcacttttgccattttttttaatagggggccaaaatcgcaacatttgaaaacttaaggggcgaaaaatgaagtttagcct 55780386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 339 - 518
Target Start/End: Complemental strand, 55844747 - 55844566
Alignment:
Q  339 aaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttataggtcaaaagagcatatttccctaaacatagga 438  Q
    |||||||| ||||||| || || ||||||||||||||||||||||||||||||||| |||| ||||  |||||||||||||||||||||||||||||||     
T  55844747 aaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatattttccttaggttaggggtcaaaagagcatatttccctaaacataggg 55844648  T
Q  439 tgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
     | |||||||||||        |||| |||| |||||||||||||||| ||||||||  ||||||||| || ||||||||||    
T  55844647 ggtcacttttgccattttttttaatagggggccaaaatcgcaacatttgaaaacttaaggggcgaaaaatgaagtttagcct 55844566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 213 - 424
Target Start/End: Complemental strand, 15795624 - 15795412
Alignment:
Q  213 tttaggctaaactgcattttt-cgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaa 311  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||  |||||||       || | ||| ||||||||||| |||| |||    
T  15795624 tttaggctaaactgcattttttcgcctcttaagtttcaaaatattgcgattttggtctcctattaaaaaaatg-cgattttagcctctttcgtcccaaaa 15795526  T
Q  312 ttgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtc 410  Q
    ||| |||||||||||| ||||||  |||||| ||| |||||||||| || |||| ||||||||  ||||||||| | |||||  |||||||||  || ||    
T  15795525 ttgatgagaagacgccacatgtcctaaaaaatgggtcataatcccaactttttgaaaagataaaaggtcaaaaagcctatttcccttatgttaggagttc 15795426  T
Q  411 aaaagagcatattt 424  Q
    ||||||||||||||    
T  15795425 aaaagagcatattt 15795412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 285 - 517
Target Start/End: Original strand, 19232412 - 19232648
Alignment:
Q  285 gcaattctagcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggt-caaa 383  Q
    |||||| | ||| |||||||||| |||||||| |||||| ||| | |||| || |||||||| ||||||| || || ||||||||||||||||||  |||    
T  19232412 gcaattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtaaaaa 19232511  T
Q  384 aaacatatttttcttatgttatag-gtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaatagg-ggtcaaaatcgcaac 480  Q
    ||||||||||| |||||||||  | |||||||||||||||||||||||||||| |    |||||||||||        |||||| |  ||||||| ||||    
T  19232512 aaacatattttccttatgttagggagtcaaaagagcatatttccctaaacatatgggatcacttttgccattttttttaataggtgaccaaaatcacaac 19232611  T
Q  481 attttaaaacttagagggcgaaaagtggagtttagcc 517  Q
    ||||| |||||||| |||| |||||||||||||||||    
T  19232612 attttgaaacttagggggcaaaaagtggagtttagcc 19232648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 213 - 517
Target Start/End: Complemental strand, 2931627 - 2931321
Alignment:
Q  213 tttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaat 312  Q
    |||||||||||||||| |||||||| | ||||||| ||||| |||  |||||  | |||||||       | | |||| | ||| |||||||||  ||||    
T  2931627 tttaggctaaactgcacttttcgccccctatgttttaaaatgttgtaattttaacctcctattaagaaaatagtaattttggcccctttcatccaaaaat 2931528  T
Q  313 tgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttat-aggtca 411  Q
      ||||||||||||| |  |||  ||||| ||||||| |||| ||  | |||||||||||||||||||||||| |||||||   ||||||||| ||||||    
T  2931527 gtctgagaagacgccacg-gtccaaaaaacggggccacaatcgcaattttttgtaaagataaggggtcaaaaagcatatttcctttatgttatgaggtca 2931429  T
Q  412 aaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaatag-gggtcaaaatcgcaacattttaaaacttagagggcgaaaagtgga 509  Q
    ||||||||||||||||||||||||||  | ||||||| |||        ||||| |   |||||| |||||||||||||||||||||||||||||||| |    
T  2931428 aaagagcatatttccctaaacatagggggtcacttttaccattttttttaatagagaaccaaaattgcaacattttaaaacttagagggcgaaaagtgaa 2931329  T
Q  510 gtttagcc 517  Q
    ||||||||    
T  2931328 gtttagcc 2931321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 316 - 429
Target Start/End: Original strand, 2715817 - 2715930
Alignment:
Q  316 tgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttataggtcaaaag 415  Q
    |||||||||||| | |||| ||||||| ||||||||||| || || |||||||||||||||||||||||| |||||||  | |||||||  |||||||||    
T  2715817 tgagaagacgccacgtgtcccaaaaaatgggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccatatgttaggggtcaaaag 2715916  T
Q  416 agcatatttcccta 429  Q
    | ||||||||||||    
T  2715917 atcatatttcccta 2715930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 304 - 518
Target Start/End: Complemental strand, 45633652 - 45633437
Alignment:
Q  304 tcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttcttatgt 402  Q
    |||| |||||| |||||| ||||| | ||||  |||||| ||| ||||||| || || |||  |||||||||||||||||| | |||||||  |||||||    
T  45633652 tcccaaaattgttgagaa-acgccacgtgtcctaaaaaaagggtcataatcacaacttttttaaaagataaggggtcaaaagagcatatttc-cttatgt 45633555  T
Q  403 tata-ggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnn-aataggggtcaaaatcgcaacattttaaaacttagagggcg 500  Q
    ||   |||||| ||||||||||||||||||||||||  | |||||||||||        |||||||||||||||||||| ||||| |||||||| |||||    
T  45633554 taggcggtcaatagagcatatttccctaaacatagggagtcacttttgccattttttttaataggggtcaaaatcgcaatattttgaaacttagggggcg 45633455  T
Q  501 aaaagtggagtttagcct 518  Q
    ||||||| ||||||||||    
T  45633454 aaaagtgtagtttagcct 45633437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 460 - 519
Target Start/End: Complemental strand, 24626279 - 24626220
Alignment:
Q  460 aataggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24626279 aataggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtgcagtttagcctt 24626220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 309 - 434
Target Start/End: Original strand, 51291262 - 51291389
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttttcttatgtta-ta 406  Q
    |||||| |||||||||||| |||||| ||||||||||||||||||| || || ||||  ||||||||||||||||| | |||||||  |||||||||       
T  51291262 aaattggtgagaagacgccacatgtcccaaaaaaggggccataatcacaactttttgagaagataaggggtcaaaagatcatatttcccttatgttaggg 51291361  T
Q  407 ggtcaaaagagcatatttccctaaacat 434  Q
    |||||||||| |||||||||||||||||    
T  51291362 ggtcaaaagaacatatttccctaaacat 51291389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 317 - 518
Target Start/End: Complemental strand, 41034839 - 41034634
Alignment:
Q  317 gagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaag 415  Q
    ||||||||||| | |||  |||||||||| | |||||| || || |||||||| ||||||||||||||| |||||||  |||||||||  ||||||||||    
T  41034839 gagaagacgccacgtgttccaaaaaagggactataatcgcaactttttgtaaaaataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaag 41034740  T
Q  416 agcatatttccctaaacataggatgccacttttgcca-nnnnnnnaat-aggggtcaaaatcgcaacattttaaaac-ttagagggcgaaaagtggagtt 512  Q
    | ||||||||||| | ||||||  | |||||||||||        ||| |||||||||||| |||||||||| |||| ||| || |||||||||| ||||    
T  41034739 atcatatttccctgagcatagggggtcacttttgccattttttttaataaggggtcaaaattgcaacattttgaaactttaaagtgcgaaaagtgaagtt 41034640  T
Q  513 tagcct 518  Q
    ||||||    
T  41034639 tagcct 41034634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 309 - 514
Target Start/End: Complemental strand, 15734609 - 15734403
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatattt-ttcttatgttatag 407  Q
    |||||||||||||||||  || |||| ||||||||||||||| ||| || || |||||||| || | |||||||||  |||||||   |||||||||  |    
T  15734609 aaattgctgagaagacgttgcgtgtcccaaaaaaggggccattatcacaactttttgtaaacatgacgggtcaaaaggcatatttccccttatgtta-gg 15734511  T
Q  408 gtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaatag-gggtcaaaatcgcaacattttaaaacttagagggcgaaaagt 506  Q
    ||||||||| |||||||||||||||||||   | |||||||| ||       ||||| ||| |||||||| |||||||| |||||||  || ||||||||    
T  15734510 gtcaaaagaacatatttccctaaacatagagggtcacttttgtcatttttttaatagcgggccaaaatcgtaacattttgaaacttaagggccgaaaagt 15734411  T
Q  507 ggagttta 514  Q
    | ||||||    
T  15734410 gtagttta 15734403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 298 - 437
Target Start/End: Complemental strand, 4098879 - 4098738
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttttc 396  Q
    ||||| |||| ||||||  ||||||||||| | |||| ||||||||||||| ||||  || || ||||  ||||||||||||||||| | |||||||  |    
T  4098879 ctttcgtcccaaaattgacgagaagacgccacgtgtcccaaaaaaggggccttaattgcaactttttgagaagataaggggtcaaaagatcatatttccc 4098780  T
Q  397 ttatgtta-taggtcaaaagagcatatttccctaaacatagg 437  Q
    ||||||||   ||||||||||||||||||||| |||||||||    
T  4098779 ttatgttagggggtcaaaagagcatatttcccaaaacatagg 4098738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 407 - 519
Target Start/End: Original strand, 25618788 - 25618902
Alignment:
Q  407 ggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnn-aatagggg-tcaaaatcgcaacattttaaaacttagagggcgaaaa 504  Q
    |||||||||||||||||||||||||| ||||  | |||||||||||        |||||||| ||||||| |||||||||| |||||||||||||| |||    
T  25618788 ggtcaaaagagcatatttccctaaacttagggggtcacttttgccatttttcttaatagggggtcaaaattgcaacattttgaaacttagagggcgcaaa 25618887  T
Q  505 gtggagtttagcctt 519  Q
    ||| |||||||||||    
T  25618888 gtgaagtttagcctt 25618902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 470 - 517
Target Start/End: Original strand, 17138540 - 17138587
Alignment:
Q  470 aaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcc 517  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17138540 aaaatcgcaacattttaaaacttagggggcgaaaagtggagtttagcc 17138587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 298 - 384
Target Start/End: Original strand, 25618710 - 25618795
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa 384  Q
    |||||||||  ||||||||||||||||||| | |||| ||||| ||||||||||||| |  || |||||||||||||||||||||||    
T  25618710 ctttcatccaaaaattgctgagaagacgccacgtgtcccaaaa-aggggccataatcgccactttttgtaaagataaggggtcaaaa 25618795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 331 - 431
Target Start/End: Complemental strand, 23362620 - 23362519
Alignment:
Q  331 tgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttata-ggtcaaaagagcatatttcccta 429  Q
    |||| ||||||||||| ||||||| || || |||||||||||||| |   ||||| |||||||| ||||||||| | |||||||||| ||||||||||||    
T  23362620 tgtcccaaaaaaggggtcataatcgcaactttttgtaaagataagagactaaaaagcatattttccttatgttaaagggtcaaaagaacatatttcccta 23362521  T
Q  430 aa 431  Q
    ||    
T  23362520 aa 23362519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 216 - 345
Target Start/End: Complemental strand, 47869958 - 47869829
Alignment:
Q  216 aggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattgc 315  Q
    |||||||| |||| |||| ||| | ||| ||||||||| ||| |||||||||  ||||||       |||||||||| ||||| |||||||| |||||||    
T  47869958 aggctaaagtgcaatttttgccccctatatttcaaaatgttgtgattttggccccctattaaaaaaatggcaattctggcctccttcatcccaaaattgc 47869859  T
Q  316 tgagaagacgccgcatgtctcaaaaaaggg 345  Q
    |||||||||||| | |||  ||||||||||    
T  47869858 tgagaagacgccacgtgttccaaaaaaggg 47869829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 464 - 518
Target Start/End: Original strand, 18259362 - 18259416
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    |||| ||||||||||||||||| ||| ||||||||||||||||| ||||||||||    
T  18259362 ggggccaaaatcgcaacattttgaaatttagagggcgaaaagtgaagtttagcct 18259416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 304 - 432
Target Start/End: Original strand, 24626308 - 24626438
Alignment:
Q  304 tcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttcttatgt 402  Q
    |||| |||||| | ||||||| || |||||| ||||| | ||| ||||||| || || ||||  ||||||||| ||||||| | |||||||  |||||||    
T  24626308 tcccaaaattgttaagaagacaccacatgtcccaaaacatgggtcataatcacaactttttgagaagataaggagtcaaaagatcatatttcccttatgt 24626407  T
Q  403 tatag-gtcaaaagagcatatttccctaaac 432  Q
    ||| | |||||||||||||||||||||||||    
T  24626408 tattgagtcaaaagagcatatttccctaaac 24626438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 464 - 518
Target Start/End: Complemental strand, 43793684 - 43793630
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    |||| |||||||||||||||||||||| ||| |||||||||||| ||||||||||    
T  43793684 ggggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcagtttagcct 43793630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 469 - 517
Target Start/End: Original strand, 4098912 - 4098960
Alignment:
Q  469 caaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcc 517  Q
    ||||||||||||||||||||||||||||| | ||||||| |||||||||    
T  4098912 caaaatcgcaacattttaaaacttagaggtcaaaaagtgcagtttagcc 4098960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 464 - 519
Target Start/End: Complemental strand, 3927719 - 3927664
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    |||| ||||||||||||||||||||| |||||||| |||||||| | |||||||||    
T  3927719 ggggccaaaatcgcaacattttaaaagttagagggggaaaagtgcactttagcctt 3927664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 470 - 517
Target Start/End: Original strand, 45633693 - 45633740
Alignment:
Q  470 aaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcc 517  Q
    |||||||||||||||||||||||| ||||||||||||| |||| ||||    
T  45633693 aaaatcgcaacattttaaaacttaaagggcgaaaagtgaagttaagcc 45633740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 464 - 518
Target Start/End: Complemental strand, 13826473 - 13826419
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    |||||||||||||||||||||| |||| ||| |||||||||||| | ||||||||    
T  13826473 ggggtcaaaatcgcaacatttttaaacatagggggcgaaaagtgcactttagcct 13826419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 298 - 384
Target Start/End: Original strand, 36729170 - 36729256
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa 384  Q
    |||||||||| ||||| ||||||||||||| |||||| |||||||  || |||||||  | || ||||  |||||||||||||||||    
T  36729170 ctttcatcccaaaattactgagaagacgccacatgtcccaaaaaaaaggtcataatcgaaactttttgagaagataaggggtcaaaa 36729256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 464 - 517
Target Start/End: Original strand, 9397440 - 9397493
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcc 517  Q
    |||| ||||||| |||||||||||||||||| ||| |||||||| |||||||||    
T  9397440 ggggccaaaatcccaacattttaaaacttagggggtgaaaagtgcagtttagcc 9397493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 20919383 - 20919334
Alignment:
Q  469 caaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    ||||||||||||||||| |||||||| || ||||||||| ||||||||||    
T  20919383 caaaatcgcaacattttgaaacttaggggtcgaaaagtgcagtttagcct 20919334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 469 - 517
Target Start/End: Original strand, 4099045 - 4099093
Alignment:
Q  469 caaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcc 517  Q
    ||||||||||||||||||||| ||||||| | ||||||| |||||||||    
T  4099045 caaaatcgcaacattttaaaatttagaggtcaaaaagtgcagtttagcc 4099093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 215 - 267
Target Start/End: Original strand, 4433181 - 4433233
Alignment:
Q  215 taggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggc 267  Q
    |||||||||||||| |||||||| | ||||||||| ||| |||||||||||||    
T  4433181 taggctaaactgcacttttcgccccctatgtttcataatgttgcgattttggc 4433233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 362 - 452
Target Start/End: Complemental strand, 9397350 - 9397258
Alignment:
Q  362 tttgtaaagataaggggtcaaaaaa-catatttttcttatgttatagg-tcaaaagagcatatttccctaaacataggatgccacttttgcca 452  Q
    ||||||||||||| |||| |||||| |||||||   |||||||| ||| ||||||||||||||||||||| |||| |||   |||||||||||    
T  9397350 tttgtaaagataaagggttaaaaaaacatatttcctttatgttagagggtcaaaagagcatatttccctatacatgggagatcacttttgcca 9397258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 470 - 514
Target Start/End: Complemental strand, 20079195 - 20079151
Alignment:
Q  470 aaaatcgcaacattttaaaacttagagggcgaaaagtggagttta 514  Q
    |||||| |||||||||||||||||| |||||||||||| ||||||    
T  20079195 aaaatcacaacattttaaaacttagggggcgaaaagtgcagttta 20079151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 463 - 518
Target Start/End: Complemental strand, 4433237 - 4433182
Alignment:
Q  463 aggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    ||||| ||||||||||||||| | |||| ||| |||||||||||| ||||||||||    
T  4433237 aggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcagtttagcct 4433182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 470 - 517
Target Start/End: Complemental strand, 13394583 - 13394536
Alignment:
Q  470 aaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcc 517  Q
    ||||||||||||||||||||| ||| |||||||||||| | |||||||    
T  13394583 aaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagcc 13394536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 470 - 517
Target Start/End: Complemental strand, 13397722 - 13397675
Alignment:
Q  470 aaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcc 517  Q
    ||||||||||||||||||||| ||| |||||||||||| | |||||||    
T  13397722 aaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagcc 13397675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 519
Target Start/End: Complemental strand, 15058877 - 15058818
Alignment:
Q  460 aataggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    |||||||| ||||||||||||||||| |||| ||| |||| ||||||| | |||||||||    
T  15058877 aataggggccaaaatcgcaacattttgaaacatagggggccaaaagtgcactttagcctt 15058818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 45633435 - 45633486
Alignment:
Q  214 ttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttg 265  Q
    |||||||||||| || |||||||| | || ||||||||||||||||||||||    
T  45633435 ttaggctaaactacacttttcgccccctaagtttcaaaatattgcgattttg 45633486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 213 - 275
Target Start/End: Original strand, 35475287 - 35475349
Alignment:
Q  213 tttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctatt 275  Q
    ||||||||||||| |||||||||||   || |||| ||||| |||||||||||||| ||||||    
T  35475287 tttaggctaaacttcatttttcgccctctaagttttaaaatgttgcgattttggctccctatt 35475349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 213 - 275
Target Start/End: Complemental strand, 41877332 - 41877270
Alignment:
Q  213 tttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctatt 275  Q
    ||||||||||||| || ||||||||   || |||||||||| |||||||||||||| ||||||    
T  41877332 tttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggctccctatt 41877270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 55780383 - 55780437
Alignment:
Q  213 tttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggc 267  Q
    ||||||||||||| ||||||||||| |||| ||||  |||| |||||||||||||    
T  55780383 tttaggctaaacttcatttttcgccccttaagttttcaaatgttgcgattttggc 55780437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 55844563 - 55844617
Alignment:
Q  213 tttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggc 267  Q
    ||||||||||||| ||||||||||| |||| ||||  |||| |||||||||||||    
T  55844563 tttaggctaaacttcatttttcgccccttaagttttcaaatgttgcgattttggc 55844617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 2931583 - 2931624
Alignment:
Q  477 caacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    |||||||||||||| ||| |||||||||||| ||||||||||    
T  2931583 caacattttaaaacatagggggcgaaaagtgcagtttagcct 2931624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 24626472 - 24626521
Alignment:
Q  469 caaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    |||||| ||||||||||||||||||| | || ||||||| ||||||||||    
T  24626472 caaaattgcaacattttaaaacttagggagcaaaaagtgcagtttagcct 24626521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 8e-54; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 216 - 518
Target Start/End: Complemental strand, 34834229 - 34833924
Alignment:
Q  216 aggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattgc 315  Q
    |||||||| |||| |||||||| ||||||||| ||||||||||||||||| | |||||||       |||||||| | |||   |||||||| |||||||    
T  34834229 aggctaaagtgcacttttcgccccttatgttttaaaatattgcgattttgacctcctattaaaaaaatggcaattttggcccacttcatcccaaaattgc 34834130  T
Q  316 tgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaa 414  Q
    |||||||||||| | |||| ||||||||||||||||||   | || ||||||||||||| ||||||||||||||||||  |||||||||  |||||||||    
T  34834129 tgagaagacgccacgtgtcccaaaaaaggggccataattgtaactttttgtaaagataacgggtcaaaaaacatatttcccttatgttaggaggtcaaaa 34834030  T
Q  415 gagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaataggggtca-aaatcgcaacattttaaaacttagagggcgaaaagtggagtt 512  Q
    |||||||||||||||||||||||  | |||||||||||        ||||||||  |  ||| |||||||||| ||||||||||||||||||||| ||||    
T  34834029 gagcatatttccctaaacatagggggtcacttttgccattttttttaataggggcgaggaattgcaacattttgaaacttagagggcgaaaagtgaagtt 34833930  T
Q  513 tagcct 518  Q
    ||||||    
T  34833929 tagcct 34833924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 283 - 518
Target Start/End: Complemental strand, 18791594 - 18791357
Alignment:
Q  283 tggcaattctagcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaa 382  Q
    |||||||| | ||| | |||||||| |||||| |||||||||||| | ||||  |||||||||||||||||| || || ||||||||||| |||||||||    
T  18791594 tggcaattttggcccccttcatcccaaaattgttgagaagacgccacgtgtcctaaaaaaggggccataatcgcaactttttgtaaagatgaggggtcaa 18791495  T
Q  383 aaaacatatttttcttatgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaatag-gggtcaaaatcgcaac 480  Q
    ||| |||||||  |||||||||   |||||||||||||||||||||||||||||||  | |||||||||||       ||||| ||| ||||||||||||    
T  18791494 aaagcatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttaatagagggccaaaatcgcaac 18791395  T
Q  481 attttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  18791394 attttaaaacttagagggcgaaaagtgaagtttagcct 18791357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 300 - 517
Target Start/End: Original strand, 26710391 - 26710611
Alignment:
Q  300 ttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttctta 399  Q
    |||||||| ||||| ||||||||| ||| | |||| ||||||||||||||||||| || || ||||||||||||||||||||||||||||||||| ||||    
T  26710391 ttcatcccaaaattactgagaagatgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacatattttcctta 26710490  T
Q  400 tgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagag 496  Q
    |||||  ||||||||||||||||||||||||||||||||  | | |||||||||        |||| |||| ||||||||||||||||| ||||||||||    
T  26710491 tgttaggaggtcaaaagagcatatttccctaaacatagggggtcgcttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttagag 26710590  T
Q  497 ggcgaaaagtggagtttagcc 517  Q
    ||||||||||| |||||||||    
T  26710591 ggcgaaaagtgaagtttagcc 26710611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 217 - 518
Target Start/End: Complemental strand, 31211095 - 31210793
Alignment:
Q  217 ggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattgct 316  Q
    ||||||| |||| |||| ||| | |||||||||||||||||||||||||  | ||||||       |||||||| | ||| |||||||||| ||||||||    
T  31211095 ggctaaagtgcacttttggccccctatgtttcaaaatattgcgattttga-tccctattaaaaaa-tggcaattttggcccctttcatcccaaaattgct 31210998  T
Q  317 gagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaag 415  Q
    |||||||| || | |||| ||||||||| || |||||| || || |||||||||||||||||||||||| |||||||  |||||||||  ||||||||||    
T  31210997 gagaagacaccacgtgtcccaaaaaaggtgctataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaag 31210898  T
Q  416 agcatatttccctaaacataggatgccacttttgcca-nnnnnnnaatagg-ggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagttt 513  Q
    ||||||||| ||||||||||||  | |||||||| ||        |||||| || ||||||||||||||||||||||||||||||||||||||| |||||    
T  31210897 agcatattttcctaaacatagggggtcacttttgtcattttttttaataggaggccaaaatcgcaacattttaaaacttagagggcgaaaagtgaagttt 31210798  T
Q  514 agcct 518  Q
    |||||    
T  31210797 agcct 31210793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 299 - 518
Target Start/End: Complemental strand, 24051229 - 24051008
Alignment:
Q  299 tttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttctt 398  Q
    ||||||||| |||||| |||||||||||| | |||| |||||||| || ||||||| || || |||||||| |||||||||||||||  |||||| ||||    
T  24051229 tttcatcccaaaattgatgagaagacgccacgtgtcccaaaaaagaggtcataatcgcaactttttgtaaatataaggggtcaaaaagtatatttctctt 24051130  T
Q  399 atgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagag 496  Q
    ||||||  ||||||||||||||||||||||||||||||||  | |||||||||||       |||| |||| ||||||||||||||||| ||||||||||    
T  24051129 atgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttaatagggggccaaaatcgcaacattttgaaacttagag 24051030  T
Q  497 ggcgaaaagtggagtttagcct 518  Q
    ||||||||||| ||||||||||    
T  24051029 ggcgaaaagtgaagtttagcct 24051008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 298 - 519
Target Start/End: Complemental strand, 32451948 - 32451724
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttct 397  Q
    |||||||||  |||||| |||||||||||| |||||||||||||||||| ||||||| || || |||||||||||||||||||||||| |||||||  ||    
T  32451948 ctttcatccaaaaattgttgagaagacgccacatgtctcaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatatttccct 32451849  T
Q  398 tatgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttag 494  Q
    |||||||  ||||||||||||||||||||  ||||||||||  | |||||||||||        |||| |||| ||||||| ||||||||| ||||||||    
T  32451848 tatgttaggaggtcaaaagagcatatttctataaacatagggggtcacttttgccattttttttaatagggggccaaaatcacaacattttgaaacttag 32451749  T
Q  495 agggcgaaaagtggagtttagcctt 519  Q
    ||||||||||||| |||||||||||    
T  32451748 agggcgaaaagtgaagtttagcctt 32451724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 285 - 518
Target Start/End: Original strand, 14572247 - 14572481
Alignment:
Q  285 gcaattctagcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa 384  Q
    |||||| | ||| |||||||||  ||||||||||||||| ||| |||||| ||||||| ||||||||||| || || ||| |||||||||||||||||||    
T  14572247 gcaattttggcccctttcatccaaaaattgctgagaagatgccacatgtcccaaaaaaagggccataatcgcaactttttataaagataaggggtcaaaa 14572346  T
Q  385 aacatatttttcttatgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaata-ggggtcaaaatcgcaacat 482  Q
    | |||||||  |||||||||  | ||||||||||||||||||||||||||||||  | |||||||||||       |||| |||| |||||| |||| ||    
T  14572347 agcatatttcccttatgttaggatgtcaaaagagcatatttccctaaacatagg-ggtcacttttgccatttttttaatagggggccaaaattgcaatat 14572445  T
Q  483 tttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    ||||||||||||||||||||||||||| ||||||||    
T  14572446 tttaaaacttagagggcgaaaagtggactttagcct 14572481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 215 - 518
Target Start/End: Original strand, 4597403 - 4597710
Alignment:
Q  215 taggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaatt 313  Q
    |||| |||| |||| |||||||| | ||||||||||||| ||||||||||||   ||||||        || ||||| | ||| | |||| ||| |||||    
T  4597403 taggataaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggtcccctattaaaaaaaatgacaattttggcccccttcaacccaaaatt 4597502  T
Q  314 gctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaa 412  Q
     |||| |||||||| |||||| ||||||||||||||||||  || || ||||||||||||||||||||||||||||||||  |||||||||  |||||||    
T  4597503 actgaaaagacgccacatgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaa 4597602  T
Q  413 aagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggag 510  Q
    |||||||||||||||||||||||||  | || ||||||||        |||| |||| |||||| |||||||||| ||||||||||||||||||||| ||    
T  4597603 aagagcatatttccctaaacatagggggtcatttttgccattttttataatagggggccaaaattgcaacattttgaaacttagagggcgaaaagtgaag 4597702  T
Q  511 tttagcct 518  Q
    ||||||||    
T  4597703 tttagcct 4597710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 300 - 517
Target Start/End: Complemental strand, 24603581 - 24603361
Alignment:
Q  300 ttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttctta 399  Q
    |||||||| |||||||||||||||||||   ||||  |||||||||||||||||| || || |||||||||||||||||||||||| |||||||  ||||    
T  24603581 ttcatcccaaaattgctgagaagacgccatgtgtccaaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttccctta 24603482  T
Q  400 tgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaatagggg-tcaaaatcgcaacattttaaaacttagag 496  Q
    |||||  ||||||||||||||||||||||||||||||||  | |||||||||||        ||||||||  ||||||||||||||||| ||||||| ||    
T  24603481 tgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaataggggagcaaaatcgcaacattttgaaacttaaag 24603382  T
Q  497 ggcgaaaagtggagtttagcc 517  Q
    | ||||||||| |||||||||    
T  24603381 gacgaaaagtgaagtttagcc 24603361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 215 - 437
Target Start/End: Original strand, 35102489 - 35102713
Alignment:
Q  215 taggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaatt 313  Q
    ||||||||| |||| |||||||| | ||||||||||||| |||||||||| ||  ||||||        |||||||| | ||| | |||||||| |||||    
T  35102489 taggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttagccccctattaaaaaaaatggcaattttggcccccttcatcccaaaatt 35102588  T
Q  314 gctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaa 412  Q
    |||||||||||||| | |||| ||||||||||||||||||  || || |||||||||||||||||||||||| |||||||  |||||||||  |||||||    
T  35102589 gctgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaa 35102688  T
Q  413 aagagcatatttccctaaacatagg 437  Q
    |||||||||||||||||||||||||    
T  35102689 aagagcatatttccctaaacatagg 35102713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 213 - 503
Target Start/End: Complemental strand, 15298792 - 15298500
Alignment:
Q  213 tttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctatt-nnnnnnntggcaattctagcctctttcatcccgaaa 311  Q
    |||||| |||| |||||||||||||   ||||||||||||| |||||||||||||  | ||||        |||||||| | ||  | || ||| | |||    
T  15298792 tttaggttaaagtgcatttttcgccctctatgtttcaaaatgttgcgattttggccccttattaaaaaaaatggcaattttggctccctttatctcaaaa 15298693  T
Q  312 ttgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtc 410  Q
    |||||||||||||||| | |||| ||||||| || |||||||| || || |||||||||||||||| |||||||||||||||| |||||||||  |||||    
T  15298692 ttgctgagaagacgccacttgtcccaaaaaa-ggaccataatcgcaactttttgtaaagataagggatcaaaaaacatattttccttatgttaggaggtc 15298594  T
Q  411 aaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaa 503  Q
    |||||||||||||||||||||||||||  | |||||||||||       |||| |||| |||| |||||||||||| |||||||||||||||||    
T  15298593 aaaagagcatatttccctaaacatagggggtcacttttgccatttttttaatagggggccaaactcgcaacattttgaaacttagagggcgaaa 15298500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 309 - 517
Target Start/End: Complemental strand, 22269617 - 22269410
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttatagg 408  Q
    |||||| |||||||||||| | |||| ||||||||||||||||| | || || ||||||||||||||||||||||||||||||||  |||||||||  ||    
T  22269617 aaattgttgagaagacgccacgtgtcccaaaaaaggggccataaacacaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaaggg 22269518  T
Q  409 tcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaatag-gggtcaaaatcgcaacattttaaaacttagagggcgaaaagtg 507  Q
    |||||||| ||||||||||||||||||||  | |||||||||||       ||||| ||| ||||||||||| ||||| ||||||||||| |||||||||    
T  22269517 tcaaaagaacatatttccctaaacatagg-ggtcacttttgcca-ttttttaatagagggccaaaatcgcaatattttgaaacttagaggacgaaaagtg 22269420  T
Q  508 gagtttagcc 517  Q
     |||||||||    
T  22269419 cagtttagcc 22269410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 309 - 517
Target Start/End: Complemental strand, 25819895 - 25819685
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-tag 407  Q
    ||||||||||||||||||| | |||| ||||||||||| ||||||| || || |||||||||||||||||||||||| |||||||  |||||||||  ||    
T  25819895 aaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggag 25819796  T
Q  408 gtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaag 505  Q
    |||| ||||| |||||||||||||||||||  | |||||||||||        |||| |||| |||||| ||||||||||||||||||||||||||||||    
T  25819795 gtcagaagagtatatttccctaaacatagg-ggtcacttttgccattttttttaatagggggccaaaattgcaacattttaaaacttagagggcgaaaag 25819697  T
Q  506 tggagtttagcc 517  Q
    ||  ||||||||    
T  25819696 tgaggtttagcc 25819685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 215 - 428
Target Start/End: Original strand, 18749095 - 18749309
Alignment:
Q  215 taggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattg 314  Q
    |||||||||||||| |||||||| ||||||||| ||||| |||| ||||||||  ||||||       | |||||| | ||| ||||||| |  ||||||    
T  18749095 taggctaaactgcacttttcgccccttatgttttaaaatgttgcaattttggccccctattaaaaaaatagcaattttggcccctttcatacaaaaattg 18749194  T
Q  315 ctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgttat-aggtcaaa 413  Q
     | |||||| ||| |||||| ||||||||||| ||||||| || || |||||||||||||||||||||||| |||||||  |||||||||| ||||||||    
T  18749195 ataagaagaagccacatgtcccaaaaaaggggacataatcacaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttatgaggtcaaa 18749294  T
Q  414 agagcatatttccct 428  Q
     || |||||||||||    
T  18749295 tgaacatatttccct 18749309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 298 - 518
Target Start/End: Original strand, 22968238 - 22968458
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttct 397  Q
    |||||||||| |||||||| |||||| | | | ||||||| ||||||| | |||||| || || |||||||||||||||| |||||||||||||||  ||    
T  22968238 ctttcatcccaaaattgctcagaagatgtcacgtgtctcagaaaagggtc-ataatcgcaactttttgtaaagataaggg-tcaaaaaacatatttccct 22968335  T
Q  398 tatgttatagg-tcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaataggggtcaaaatcgcaacattttaaaacttaga 495  Q
    |||||||  || |||||||||||||||||||||||||||||  | |||||||||||        |||||||| ||||||||||||||||| |||||||      
T  22968336 tatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaataggggccaaaatcgcaacattttgaaacttaag 22968435  T
Q  496 gggcgaaaagtggagtttagcct 518  Q
    |||||||||||| | ||||||||    
T  22968436 gggcgaaaagtgaactttagcct 22968458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 298 - 518
Target Start/End: Complemental strand, 23820155 - 23819935
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttct 397  Q
    |||||||||| |||||||| |||||| | | | ||||||| ||||||| | |||||| || || |||||||||||||||| |||||||||||||||  ||    
T  23820155 ctttcatcccaaaattgctcagaagatgtcacgtgtctcagaaaagggtc-ataatcgcaactttttgtaaagataaggg-tcaaaaaacatatttccct 23820058  T
Q  398 tatgttatagg-tcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaataggggtcaaaatcgcaacattttaaaacttaga 495  Q
    |||||||  || |||||||||||||||||||||||||||||  | |||||||||||        |||||||| ||||||||||||||||| |||||||      
T  23820057 tatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaataggggccaaaatcgcaacattttgaaacttaag 23819958  T
Q  496 gggcgaaaagtggagtttagcct 518  Q
    |||||||||||| | ||||||||    
T  23819957 gggcgaaaagtgaactttagcct 23819935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 362 - 519
Target Start/End: Original strand, 32682424 - 32682582
Alignment:
Q  362 tttgtaaagataaggggtcaaaaaacatatttttcttatgttat-aggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnna 460  Q
    ||||||||||||||||||||||||||||||||   ||||||||| ||||||||||||||||||||||||||||||||  | ||||||||| |       |    
T  32682424 tttgtaaagataaggggtcaaaaaacatatttcctttatgttatgaggtcaaaagagcatatttccctaaacatagg-ggtcacttttgctattttttta 32682522  T
Q  461 atag-gggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    |||| |   |||||| ||||||||||||||||||||||| |||||||| |||||||||||    
T  32682523 atagagaaccaaaattgcaacattttaaaacttagagggtgaaaagtgaagtttagcctt 32682582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 331 - 518
Target Start/End: Complemental strand, 8412947 - 8412757
Alignment:
Q  331 tgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaagagcatatttcccta 429  Q
    |||| ||||||||||| ||||||| || || ||||||||||||||||||||||||||||||||  |||||||||   ||||||||||||||||||| |||    
T  8412947 tgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttctcta 8412848  T
Q  430 aacataggatgccacttttgcca-nnnnnnnaataggg-gtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    ||||||||  | | |||||||||        ||||||| | ||||||||||||||||| |||||||  ||||| |||||||| ||||||||    
T  8412847 aacatagggggtcgcttttgccattttttttaatagggagccaaaatcgcaacattttgaaacttaaggggcggaaagtggactttagcct 8412757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 298 - 515
Target Start/End: Complemental strand, 3118901 - 3118683
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttct 397  Q
    |||||||||| |||||| | |||||| | | | |||| || |||||||| ||||||| ||  | |||||||||||||| |||||||||||||||||  ||    
T  3118901 ctttcatcccaaaattgatcagaagatgtcacgtgtcccagaaaaggggtcataatcgcaaatttttgtaaagataagaggtcaaaaaacatatttccct 3118802  T
Q  398 tatgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaatagggg-tcaaaatcgcaacattttaaaacttaga 495  Q
    |||||||   ||||||||||||||||||||||||||||||   | |||||||||||       |||||||| ||||||||| |||||||| ||||||||     
T  3118801 tatgttagggggtcaaaagagcatatttccctaaacatagagggtcacttttgcca-ttttttaataggggatcaaaatcgtaacattttgaaacttagg 3118703  T
Q  496 gggcgaaaagtggagtttag 515  Q
     |||||||||| || |||||    
T  3118702 aggcgaaaagtagattttag 3118683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 385 - 517
Target Start/End: Original strand, 18749297 - 18749432
Alignment:
Q  385 aacatatttttcttatgttat-aggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnn-aatagggg-tcaaaatcgcaaca 481  Q
    |||||||||  |||||||||  ||||||||||||||||||||||||||||||||  | |||||||||||        |||||||| ||||||||||||||    
T  18749297 aacatatttcccttatgttaagaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggtcaaaatcgcaaca 18749396  T
Q  482 ttttaaaacttagagggcgaaaagtggagtttagcc 517  Q
    |||| ||||||||||||||||||||| |||||||||    
T  18749397 ttttgaaacttagagggcgaaaagtgaagtttagcc 18749432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 294 - 430
Target Start/End: Original strand, 24615771 - 24615908
Alignment:
Q  294 gcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaa-aggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatt 392  Q
    ||||||||| |||  ||||||||||||| ||||| |||||| |||||| | ||| ||||||| || || || ||||||| || |||||||||| ||||||    
T  24615771 gcctctttcgtccaaaaattgctgagaaaacgccacatgtcccaaaaataagggtcataatcgcaacttttagtaaagagaatgggtcaaaaagcatatt 24615870  T
Q  393 tttcttatgttataggtcaaaagagcatatttccctaa 430  Q
    | || |||||||  ||||||||||||||||||||||||    
T  24615871 tctcatatgttaggggtcaaaagagcatatttccctaa 24615908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 309 - 384
Target Start/End: Original strand, 20863821 - 20863896
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa 384  Q
    |||||||||||||||||||   |||| ||||||||||||||||||| || || |||||||||||||||||||||||    
T  20863821 aaattgctgagaagacgccatgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa 20863896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 299 - 517
Target Start/End: Original strand, 19282296 - 19282514
Alignment:
Q  299 tttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttctt 398  Q
    |||| |||| ||||||||||||||| | | ||||||   ||||||||| ||||||| || || |||| ||||||||||||||||||  |||||||  |||    
T  19282296 tttcgtcccaaaattgctgagaagaagtcacatgtcc--aaaaaggggtcataatcgcaactttttgaaaagataaggggtcaaaatgcatatttccctt 19282393  T
Q  399 atgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaataggggtcaaaatcgcaacattttaaaacttagag 496  Q
    ||||||  || |||||| ||||||||| | |||||||| |  | |||||||| ||        ||||||||||||||| |||| |||||||||||||  |    
T  19282394 atgttaggagttcaaaatagcatatttacttaaacataaggggtcacttttgtcattttttttaataggggtcaaaattgcaatattttaaaacttacgg 19282493  T
Q  497 ggcgaaaagtggagtttagcc 517  Q
    | ||||||||  |||||||||    
T  19282494 gacgaaaagtacagtttagcc 19282514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 294 - 384
Target Start/End: Original strand, 23124798 - 23124888
Alignment:
Q  294 gcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa 384  Q
    ||||| ||| |||| || |||||||||||||||| ||||||   ||||||||| ||||||| || || |||||||||||||||||||||||    
T  23124798 gcctcgttcgtcccaaacttgctgagaagacgccacatgtcctcaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa 23124888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 341 - 516
Target Start/End: Original strand, 4013791 - 4013968
Alignment:
Q  341 aaggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttcttatgttatagg-tcaaaagagcatatttccctaaacatagga 438  Q
    |||||||||||||| || |  ||||  ||||||||||||||||| | |||||||  ||||| |||  || |||||||||||||||||||||||||| ||     
T  4013791 aaggggccataatcgcaacattttgagaagataaggggtcaaaagatcatatttcccttatattagggggtcaaaagagcatatttccctaaacatgggg 4013890  T
Q  439 tgccacttttgccannnnnnnaataggggtc-aaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagc 516  Q
     | |||||||| ||       |||||||| | |||||||||||||||| |||||||| || ||||||||| ||||||||    
T  4013891 -gtcacttttgacatttttttaatagggggccaaaatcgcaacattttgaaacttaggggacgaaaagtgcagtttagc 4013968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 362 - 434
Target Start/End: Complemental strand, 4371056 - 4370983
Alignment:
Q  362 tttgtaaagataaggggtcaaaaaa-catatttttcttatgttataggtcaaaagagcatatttccctaaacat 434  Q
    ||||||||||||||||||||||  | |||||||  |||||||||  ||||||||||||||||||||||||||||    
T  4371056 tttgtaaagataaggggtcaaaggagcatatttcccttatgttaggggtcaaaagagcatatttccctaaacat 4370983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 213 - 384
Target Start/End: Complemental strand, 34528454 - 34528284
Alignment:
Q  213 tttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaat 312  Q
    |||||||||||| ||| |||| ||| | || || ||||||| ||||||||||||| |||||||       || ||||| | ||| ||||| |||| ||||    
T  34528454 tttaggctaaac-gcactttttgccccctaagtatcaaaatgttgcgattttggcctcctattaaaaaaatgacaattttggcccctttcgtcccaaaat 34528356  T
Q  313 tgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa 384  Q
    ||||||||||||  | |||||| ||||| ||  ||||||||| || || ||||  |||||||||||||||||    
T  34528355 tgctgagaagacatcacatgtcccaaaacagtcgccataatcgcaactttttgagaagataaggggtcaaaa 34528284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 464 - 519
Target Start/End: Original strand, 35102714 - 35102769
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    |||| |||||| |||||||||| ||||||||||||||||||||| |||| ||||||    
T  35102714 ggggccaaaattgcaacattttgaaacttagagggcgaaaagtgaagttgagcctt 35102769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 298 - 430
Target Start/End: Complemental strand, 9241874 - 9241742
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttttc 396  Q
    ||||||| || ||||| |||||||| ||||   |||| ||||| || || ||||||| || || ||||  ||||||||||||||||| | |||||||  |    
T  9241874 ctttcattccaaaattactgagaaggcgccatgtgtcccaaaacagagggcataatcgcaactttttgagaagataaggggtcaaaagatcatatttccc 9241775  T
Q  397 ttatgttataggtcaaaagagcatatttccctaa 430  Q
    ||||||||  |||||||||| |||||||||||||    
T  9241774 ttatgtta-gggtcaaaagaacatatttccctaa 9241742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 519
Target Start/End: Original strand, 2059071 - 2059126
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    |||||||||||||||||||||||||| |||| | ||||||| || | |||||||||    
T  2059071 ggggtcaaaatcgcaacattttaaaatttagggagcgaaaaatgcaatttagcctt 2059126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 470 - 517
Target Start/End: Original strand, 8415305 - 8415352
Alignment:
Q  470 aaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcc 517  Q
    |||||||||||||| |||||| ||| |||||||||||| |||||||||    
T  8415305 aaaatcgcaacattataaaacatagggggcgaaaagtgcagtttagcc 8415352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 463 - 494
Target Start/End: Original strand, 9241900 - 9241931
Alignment:
Q  463 aggggtcaaaatcgcaacattttaaaacttag 494  Q
    ||||||||||||||||||||||||||||||||    
T  9241900 aggggtcaaaatcgcaacattttaaaacttag 9241931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 294 - 434
Target Start/End: Complemental strand, 12427459 - 12427316
Alignment:
Q  294 gcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatc-ccacctctttgtaaagataaggggt-caaaaaacatat 391  Q
    ||||||||| || | ||||||||||||||| | | | |||| |||| || ||| || |||| | || | ||||||||||||| ||||  |||||||||||    
T  12427459 gcctctttcgtcgcaaaattgctgagaagatggcacgtgtcccaaagaatgggtcaaaatcgcaacttttttgtaaagataaagggtaaaaaaaacatat 12427360  T
Q  392 ttttcttatgtt-ataggtcaaaagagcatatttccctaaacat 434  Q
    ||   ||||||| || | ||||||||||||||||||||||||||    
T  12427359 ttcctttatgttaatggttcaaaagagcatatttccctaaacat 12427316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 213 - 275
Target Start/End: Original strand, 8412754 - 8412816
Alignment:
Q  213 tttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctatt 275  Q
    ||||||||||| | || ||| |||| |||| |||||||||| |||||||||||||| ||||||    
T  8412754 tttaggctaaagtccactttccgccccttaagtttcaaaatgttgcgattttggctccctatt 8412816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 518
Target Start/End: Complemental strand, 18749150 - 18749096
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    |||| |||||| ||||||||||||||| ||  |||||||||||| ||||||||||    
T  18749150 ggggccaaaattgcaacattttaaaacataaggggcgaaaagtgcagtttagcct 18749096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 464 - 513
Target Start/End: Complemental strand, 14572231 - 14572182
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagttt 513  Q
    |||| |||||| ||||||||||||||| ||| |||||||||||| |||||    
T  14572231 ggggccaaaattgcaacattttaaaacatagggggcgaaaagtgcagttt 14572182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 463 - 504
Target Start/End: Original strand, 15298734 - 15298775
Alignment:
Q  463 aggggtcaaaatcgcaacattttaaaacttagagggcgaaaa 504  Q
    ||||| ||||||||||||||||| |||| |||||||||||||    
T  15298734 aggggccaaaatcgcaacattttgaaacatagagggcgaaaa 15298775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 267
Target Start/End: Complemental strand, 22968460 - 22968407
Alignment:
Q  214 ttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggc 267  Q
    |||||||||| | || |||||||| |||| |||||||||| |||||||||||||    
T  22968460 ttaggctaaagttcacttttcgccccttaagtttcaaaatgttgcgattttggc 22968407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 267
Target Start/End: Original strand, 23819933 - 23819986
Alignment:
Q  214 ttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggc 267  Q
    |||||||||| | || |||||||| |||| |||||||||| |||||||||||||    
T  23819933 ttaggctaaagttcacttttcgccccttaagtttcaaaatgttgcgattttggc 23819986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 466 - 519
Target Start/End: Original strand, 34834177 - 34834230
Alignment:
Q  466 ggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    |||||||||||||| |||||||||| ||  |||||||||||| | |||||||||    
T  34834177 ggtcaaaatcgcaatattttaaaacataaggggcgaaaagtgcactttagcctt 34834230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 103; Significance: 7e-51; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 215 - 519
Target Start/End: Original strand, 5648 - 5955
Alignment:
Q  215 taggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaatt 313  Q
    |||||||||||||| |||||||| | ||||||||||||| || | |||||||| |||||||        |||||||| | | | |||| ||||| |||||    
T  5648 taggctaaactgcacttttcgccccctatgtttcaaaatgttacaattttggcctcctattaaaaaaaatggcaattttggtcccttttatcccaaaatt 5747  T
Q  314 gctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaa 412  Q
    |||| ||||||||| | |||| |||||||||| |||||||| || || ||||||||||||||||||||||||||||||||  |||||||||  |||||||    
T  5748 gctgcgaagacgccacgtgtcccaaaaaaggg-ccataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaa 5846  T
Q  413 aagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggag 510  Q
    |||||||||||||||||||||||||  | |||||||||||        |||| |||| ||||||||||| ||||| ||||||||||| ||||||||| ||    
T  5847 aagagcatatttccctaaacatagggggtcacttttgccatttttttaaatagggggccaaaatcgcaatattttgaaacttagaggccgaaaagtgaag 5946  T
Q  511 tttagcctt 519  Q
    |||||||||    
T  5947 tttagcctt 5955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 102; Significance: 3e-50; HSPs: 2)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 216 - 518
Target Start/End: Original strand, 2047 - 2352
Alignment:
Q  216 aggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn--tggcaattctagcctctttcatcccgaaatt 313  Q
    ||||||||||||| |||||||| | ||||||| ||||| |||| ||||||||  ||||||         | |||||| | ||| |||||||||  |||||    
T  2047 aggctaaactgcacttttcgccccctatgttttaaaatgttgcaattttggccccctattaaaaaaaaatagcaattttggcccctttcatccaaaaatt 2146  T
Q  314 gctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaa 412  Q
    |||||||||||||| | |||| ||||||||||| ||||||| || || |||||||||||||||||||||||| ||||||   |||||||||  |||||||    
T  2147 gctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatattgcccttatgttaggaggtcaa 2246  T
Q  413 aagagcatatttccctaaacataggatgccacttttgccannnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagt 511  Q
    |||||||||||||||||||||||||  | |||||||||||       |||| |||| |||||||||||| |||||||||||||| ||||||||||||| |    
T  2247 aagagcatatttccctaaacatagggggtcacttttgccatttttttaatagggggccaaaatcgcaac-ttttaaaacttagaaggcgaaaagtggact 2345  T
Q  512 ttagcct 518  Q
    |||||||    
T  2346 ttagcct 2352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 464 - 520
Target Start/End: Complemental strand, 2101 - 2045
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagccttg 520  Q
    |||| |||||| ||||||||||||||| ||| |||||||||||| ||||||||||||    
T  2101 ggggccaaaattgcaacattttaaaacatagggggcgaaaagtgcagtttagccttg 2045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 94; Significance: 2e-45; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 214 - 518
Target Start/End: Complemental strand, 49965 - 49658
Alignment:
Q  214 ttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaatt 313  Q
    |||||||||| |||| |||||||| | ||||||||| ||| |||||||||||    ||||||       | |||||| | ||| |||||||||| |||||    
T  49965 ttaggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttgatcccctatttaaaaaatagcaattttggcccctttcatcccaaaatt 49866  T
Q  314 gctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaa 412  Q
    ||| |||||| ||| | |||| || |||||||| ||||||| || || ||||||||||||||||||||||||||||||||  |||||||||   ||||||    
T  49865 gctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaa 49766  T
Q  413 aagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaataggggt-caaaatcgcaacattttaaaacttagagggcgaaaagtggag 510  Q
    ||||||||||||||| |||||||||  | ||||| |||||        ||||||||| |||||||||||||||||||||||||  ||||||||||||||     
T  49765 aagagcatatttcccgaaacatagggggtcacttgtgccattttttttaataggggtccaaaatcgcaacattttaaaacttaaggggcgaaaagtggac 49666  T
Q  511 tttagcct 518  Q
    ||||||||    
T  49665 tttagcct 49658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 214 - 518
Target Start/End: Complemental strand, 62504 - 62197
Alignment:
Q  214 ttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaatt 313  Q
    |||||||||| |||| |||||||| | ||||||||| ||| |||||||||||    ||||||       | |||||| | ||| |||||||||| |||||    
T  62504 ttaggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttgatcccctatttaaaaaatagcaattttggcccctttcatcccaaaatt 62405  T
Q  314 gctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaa 412  Q
    ||| |||||| ||| | |||| || |||||||| ||||||| || || ||||||||||||||||||||||||||||||||  |||||||||   ||||||    
T  62404 gctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaa 62305  T
Q  413 aagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaataggggt-caaaatcgcaacattttaaaacttagagggcgaaaagtggag 510  Q
    ||||||||||||||| |||||||||  | ||||| |||||        ||||||||| |||||||||||||||||||||||||  ||||||||||||||     
T  62304 aagagcatatttcccgaaacatagggggtcacttgtgccattttttttaataggggtccaaaatcgcaacattttaaaacttaaggggcgaaaagtggac 62205  T
Q  511 tttagcct 518  Q
    ||||||||    
T  62204 tttagcct 62197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 93; Significance: 7e-45; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 225 - 519
Target Start/End: Original strand, 24972 - 25270
Alignment:
Q  225 tgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaattgctgagaaga 323  Q
    |||| |||||||||| ||||||| ||||||||||||||||||   ||||||        |||||||| | ||| ||||||| || |||||||||||||||    
T  24972 tgcacttttcgcctcatatgttttaaaatattgcgattttggtcccctattaaaaaaaatggcaattttggcccctttcataccaaaattgctgagaaga 25071  T
Q  324 cgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaagagcatat 422  Q
    |||| | |||| ||||||||||||||||||| || || ||  |||||||||||||||||||| |||||||  |||||||||   ||||||||||||||||    
T  25072 cgccacgtgtcccaaaaaaggggccataatcacaacttttgttaaagataaggggtcaaaaagcatatttcccttatgttagggggtcaaaagagcatat 25171  T
Q  423 ttccctaaacataggatgccacttttgcca-nnnnnnnaat-aggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    |||||||||||||||  | ||||||| |||        ||| ||||| |||||||||||||||||| |||||||||| |||||| || |||||||||||    
T  25172 ttccctaaacatagggggtcacttttaccattttttttaataaggggccaaaatcgcaacattttagaacttagaggacgaaaaatgaagtttagcctt 25270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 84; Significance: 2e-39; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 309 - 514
Target Start/End: Original strand, 142040 - 142247
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-tag 407  Q
    |||||||| |||||||||| | |||| ||||||| ||||||||||| || || |||||||||||||| ||||||||| |||||||  |||||||||  ||    
T  142040 aaattgcttagaagacgccacgtgtcccaaaaaatgggccataatcgcaactttttgtaaagataagaggtcaaaaagcatatttcccttatgttaggag 142139  T
Q  408 gtcaaaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaatagggg-tcaaaatcgcaacattttaaaacttagagggcgaaaag 505  Q
    ||||||||||||||||||||||||||||||  | |||||||||||        ||||||||  |||||| ||||||||||||||||||||||||||||||    
T  142140 gtcaaaagagcatatttccctaaacatagg-ggtcacttttgccattttttttaataggggaccaaaattgcaacattttaaaacttagagggcgaaaag 142238  T
Q  506 tggagttta 514  Q
    || ||||||    
T  142239 tgaagttta 142247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 81; Significance: 1e-37; HSPs: 2)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 215 - 517
Target Start/End: Complemental strand, 2296 - 1997
Alignment:
Q  215 taggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaattg 314  Q
    |||||||||||||| |||||||| |  |||||| ||||| |||| ||||||||   |||||       | |||||| | ||| |||||||||  ||||||    
T  2296 taggctaaactgcacttttcgccccccatgttttaaaatgttgcaattttggccctctattaaaaaaatagcaattttggcccctttcatccaaaaattg 2197  T
Q  315 ctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaa 413  Q
    ||||||||||||| | |||| |||||||||||| |||||| || || |||||||||||| ||||||||||| ||| |||  |||||||||  ||||||||    
T  2196 ctgagaagacgccacgtgtcccaaaaaaggggctataatcgcaactttttgtaaagatatggggtcaaaaagcatgtttcccttatgttaggaggtcaaa 2097  T
Q  414 agagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagt 511  Q
    |||||||||||||||||      |  | |||||||||||        |||| |||||||||||||||||||||||||||||||||||||||||||  |||    
T  2096 agagcatatttccctaa------ggggtcacttttgccattttttttaatagggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtaaagt 2003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 2246 - 2295
Alignment:
Q  469 caaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    |||||| ||||||||||||||| | | |||||||||||| ||||||||||    
T  2246 caaaattgcaacattttaaaacatggggggcgaaaagtgcagtttagcct 2295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 80; Significance: 4e-37; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 297 - 515
Target Start/End: Original strand, 3649 - 3866
Alignment:
Q  297 tctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttc 396  Q
    ||||||||||| |||||||||||||||| || | |||| |||||||||||| ||||||  | || |||||||||||||||||||||||| |||||||  |    
T  3649 tctttcatcccaaaattgctgagaagacacctcgtgtcccaaaaaaggggctataatcgaaactttttgtaaagataaggggtcaaaaagcatatttccc 3748  T
Q  397 ttatgtta-taggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaataggggtcaaaatcgcaacattttaaaacttaga 495  Q
    ||||||||   |||||||||||||||||||||||||||| ||  | |||||||||||       |||||||||||||||| ||| ||||| |||||||      
T  3749 ttatgttagggggtcaaaagagcatatttccctaaacatggg--gtcacttttgccatttttttaataggggtcaaaatcacaatattttgaaacttatg 3846  T
Q  496 gggcgaaaagtggagtttag 515  Q
    | || ||||||| |||||||    
T  3847 gagcaaaaagtgcagtttag 3866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 216 - 518
Target Start/End: Complemental strand, 66478 - 66182
Alignment:
Q  216 aggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaattg 314  Q
    ||||||||||||| |||||||| | ||||||||||||| |||  ||||||||  ||||||        | |||||| | ||| |||||||||  |||||     
T  66478 aggctaaactgcacttttcgccccctatgtttcaaaatgttgtaattttggcc-cctattaaaaaaaatagcaattttggcccctttcatccaaaaattt 66380  T
Q  315 ctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaa 413  Q
    ||||||||||||| | |||   |||||||||| ||||||| || || |||||||||||||||||||||||| |||| ||  |||||||||  ||||||||    
T  66379 ctgagaagacgccacgtgttcaaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatagttcccttatgttaggaggtcaaa 66280  T
Q  414 agagcatatttccctaaacataggatgccacttttgccannnnnnnaataggggtc--aaaatcgcaacattttaaaacttagagggcgaaaagtggagt 511  Q
    | ||||||||||||||||||||||  |||| ||||           |||||||| |  ||||| |||||||||||||||||||||||||||||||| |||    
T  66279 atagcatatttccctaaacatagg-ggccattttt--------tttaatagggggccaaaaattgcaacattttaaaacttagagggcgaaaagtgaagt 66189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 520
Target Start/End: Original strand, 66420 - 66480
Alignment:
Q  460 aataggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagccttg 520  Q
    |||||||| ||||||  ||||||||| |||| ||| |||||||||||| ||||||||||||    
T  66420 aataggggccaaaattacaacattttgaaacatagggggcgaaaagtgcagtttagccttg 66480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 66; Significance: 9e-29; HSPs: 2)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 298 - 434
Target Start/End: Complemental strand, 10143 - 10006
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaa-catatttttc 396  Q
    ||||| |||| |||||| |||||||||||| |||||| |||||||||||  |||||| || || ||||  ||||||||||||| ||| | |||||||| |    
T  10143 ctttcgtcccaaaattgttgagaagacgccacatgtcacaaaaaaggggaaataatcgcaactttttgagaagataaggggtctaaagatcatattttcc 10044  T
Q  397 ttatgttataggtcaaaagagcatatttccctaaacat 434  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  10043 ttatgttatgggtcaaaagagcatatttccctaaacat 10006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 10179 - 10228
Alignment:
Q  469 caaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcct 518  Q
    |||||||||||| ||||||||||||| || ||||||||| ||||||||||    
T  10179 caaaatcgcaacgttttaaaacttaggggtcgaaaagtgcagtttagcct 10228  T

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Target: scaffold1875 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold1875
Description:

Target: scaffold1875; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 215 - 519
Target Start/End: Original strand, 754 - 1061
Alignment:
Q  215 taggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaatt 313  Q
    |||||||||||||| ||||| || |||| ||||| |||| |||||||||||||  ||||||        |||||||| | ||| | ||| |||| |||||    
T  754 taggctaaactgcacttttcaccccttaagtttcgaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccccttcgtcccaaaatt 853  T
Q  314 gctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttttcttatgtta-taggtca 411  Q
    | ||||||||||||  ||||| |||| |||||| ||||||  || || ||||||||||||||||||||||| | |||||||  |||||||||  ||||||    
T  854 gttgagaagacgccagatgtcccaaataaggggtcataattgcaactttttgtaaagataaggggtcaaaagagcatatttaccttatgttagaaggtca 953  T
Q  412 aaagagcatatttccctaaacataggatgccacttttgcca-nnnnnnnaatagggg-tcaaaatcgcaacattttaaaacttagagggcgaaaagtgga 509  Q
    ||| ||||||| ||||||||||| ||  | |||||||||||        |||||||| ||||||| |||||||| |||||||||| ||||||||||||      
T  954 aaatagcatatatccctaaacattgg-ggtcacttttgccattttttttaataggggatcaaaattgcaacattataaaacttag-gggcgaaaagtgtt 1051  T
Q  510 gtttagcctt 519  Q
    ||||||||||    
T  1052 gtttagcctt 1061  T

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Target: scaffold1202 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold1202
Description:

Target: scaffold1202; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 348 - 514
Target Start/End: Original strand, 1906 - 2074
Alignment:
Q  348 cataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta-taggtcaaaagagcatatttccctaaacataggatgccactt 446  Q
    ||||||| || || |||||||||||||||||||||||| |||||||  |||||||||   |||||||| ||||||||||||||||||||||  | |||||    
T  1906 cataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagggggtcaaaatagcatatttccctaaacatagggggtcactt 2005  T
Q  447 ttgcca-nnnnnnnaataggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagttta 514  Q
    ||||||        || |||| |||||||||||||||||| |||||||||||| |||||||| ||||||    
T  2006 ttgccattttttttaaaagggatcaaaatcgcaacattttgaaacttagagggtgaaaagtgaagttta 2074  T

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Target: scaffold0150 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 213 - 437
Target Start/End: Complemental strand, 6138 - 5913
Alignment:
Q  213 tttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnntggcaattctagcctctttcatcccgaaat 312  Q
    ||||||||||| || | |||||||| | |||||||  |||| |||||||||||||  ||||||       |||||||| | ||| | |||||||| ||||    
T  6138 tttaggctaaagtgtacttttcgccccctatgtttttaaatgttgcgattttggccccctattaaaaaaatggcaattttggcccccttcatcccaaaat 6039  T
Q  313 tgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatatttttcttatgtta--taggtc 410  Q
    ||||||||||| ||| | |||| ||||||| || | |||||| || || ||| |||||||||||||||||||| |||||||  |||||||||    ||||    
T  6038 tgctgagaagatgccacgtgtcccaaaaaaaggtc-ataatcgcaactttttataaagataaggggtcaaaaagcatatttcccttatgttaggggggtc 5940  T
Q  411 aaaagagcatatttccctaaacatagg 437  Q
    |||| ||||||||||||||||||||||    
T  5939 aaaatagcatatttccctaaacatagg 5913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 250611 - 250695
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaaaacatattt 393  Q
    ||||||||||||||||||| | || | ||||||||||||||||||| || || ||||||||||||||||||||||||||||||||    
T  250611 aaattgctgagaagacgccacgtgccccaaaaaaggggccataatcacaactttttgtaaagataaggggtcaaaaaacatattt 250695  T

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Target: scaffold0007; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 464 - 517
Target Start/End: Complemental strand, 250571 - 250518
Alignment:
Q  464 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtggagtttagcc 517  Q
    ||||||||| ||||||||||||||||| ||| |||||||||||| | |||||||    
T  250571 ggggtcaaagtcgcaacattttaaaacatagggggcgaaaagtgcactttagcc 250518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 298 - 434
Target Start/End: Complemental strand, 455249 - 455111
Alignment:
Q  298 ctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttttc 396  Q
    |||||||||| ||||||||||||||||||| |||||| ||||||| ||| ||||||| || || || |  ||||||||||||||||| | |||||||  |    
T  455249 ctttcatcccaaaattgctgagaagacgccacatgtcccaaaaaatgggtcataatcgcaacttttagagaagataaggggtcaaaagatcatatttccc 455150  T
Q  397 ttatgtta-taggtcaaaagagcatatttccctaaacat 434  Q
    ||||||||   ||| |||||| ||||||| |||||||||    
T  455149 ttatgttagggggttaaaagaacatattttcctaaacat 455111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 285 - 519
Target Start/End: Complemental strand, 29951 - 29717
Alignment:
Q  285 gcaattctagcctctttcatcccgaaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa 384  Q
    |||||| | ||| ||||| |||| ||||||||||||||||||| || ||  ||||  || |||||||||  || || ||||  |||||||||||||||||    
T  29951 gcaattttggcccctttcgtcccaaaattgctgagaagacgccacaggttccaaatcagaggccataattgcaactttttgagaagataaggggtcaaaa 29852  T
Q  385 aa-catatttttcttatgttataggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaataggggt-caaaatcgcaacat 482  Q
     | |||||||  |||||||||  |||| |||||||||||||||| |||||| ||  | |||||||  ||       |||| |||| ||||| | ||||||    
T  29851 gatcatatttcccttatgttaggggtccaaagagcatatttccccaaacatggg--gtcacttttttcatttttttaataagggtccaaaaactcaacat 29754  T
Q  483 tttaaaacttagagggcgaaaagtggagtttagcctt 519  Q
    ||| |||||||| |||| ||||||| |||||||||||    
T  29753 tttgaaacttagggggcaaaaagtgcagtttagcctt 29717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 309 - 431
Target Start/End: Complemental strand, 112338 - 112214
Alignment:
Q  309 aaattgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttttcttatgtta-ta 406  Q
    ||||||| ||||||||||| |||||| ||||||| || |||||| | || || ||||  ||||||||| ||||||| | |||||||  |||||||||  |    
T  112338 aaattgcagagaagacgccacatgtcccaaaaaatggaccataaccgcaactttttgagaagataaggagtcaaaagatcatatttcccttatgttagga 112239  T
Q  407 ggtcaaaagagcatatttccctaaa 431  Q
    ||||||||  |||||||||||||||    
T  112238 ggtcaaaaaggcatatttccctaaa 112214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 313 - 384
Target Start/End: Complemental strand, 54576 - 54506
Alignment:
Q  313 tgctgagaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa 384  Q
    |||||||||| |||| |||||| |||||| |||||||||||| || || ||||||||||||||||| |||||    
T  54576 tgctgagaagccgccacatgtcccaaaaa-ggggccataatcgcaactttttgtaaagataaggggccaaaa 54506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 214 - 354
Target Start/End: Original strand, 5117 - 5259
Alignment:
Q  214 ttaggctaaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn--tggcaattctagcctctttcatcccgaaa 311  Q
    |||||||||| | ||||||||||| | ||||||||||||| |||| |||||||   ||||||         |||||||| | ||| |||||||||  |||    
T  5117 ttaggctaaattacatttttcgccccctatgtttcaaaatgttgcaattttggtcccctattaaaaaaaaatggcaattttggcccctttcatccaaaaa 5216  T
Q  312 ttgctgagaagacgccgcatgtctcaaaaaaggggccataatc 354  Q
    |||||||||||||| |   |||| |||||||||||||||||||    
T  5217 ttgctgagaagacgtcatgtgtcccaaaaaaggggccataatc 5259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 406 - 518
Target Start/End: Complemental strand, 5402 - 5289
Alignment:
Q  406 aggtcaaaagagcatatttccctaaacataggatgccacttttgccannnnnnnaata-ggggtcaaaatcgcaacattttaaaacttagagggcgaaaa 504  Q
    |||||||||||||||||||  ||||||||| |  | |||||||||||       |||| |||| |||||| |||||||||| |||| || ||||||| ||    
T  5402 aggtcaaaagagcatatttttctaaacataaggggtcacttttgccatttttttaatagggggccaaaattgcaacattttgaaacataaagggcgagaa 5303  T
Q  505 gtggagtttagcct 518  Q
    ||| ||||||||||    
T  5302 gtgtagtttagcct 5289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 434
Target Start/End: Original strand, 43827 - 44043
Alignment:
Q  220 taaactgcatttttcgcctcttatgtttcaaaatattgcgattttggcttcctattnnnnnnn-tggcaattctagcctctttcatcccgaaattgctga 318  Q
    ||||||||| |||||||||| || |||||||||| || | ||||||||  ||||||        ||||| || | ||||||| | || | ||||||||||    
T  43827 taaactgcacttttcgcctcctaagtttcaaaatgtttcaattttggccccctatttaagaaaatggcagtttttgcctcttccgtcacaaaattgctga 43926  T
Q  319 gaagacgccgcatgtctcaaaaaaggggccataatcccacctctttgtaaagataaggggtcaaaa-aacatatttttcttatgttataggtcaaaagag 417  Q
    ||||||||| | |||| ||||| |||| ||||| || || || ||||  |||||||  |||||||| | |||||||  |||  ||||  |||||||| ||    
T  43927 gaagacgccacgtgtcccaaaacagggaccatagtcgcaactttttgagaagataaaaggtcaaaagatcatatttccctttcgttaggggtcaaaaaag 44026  T
Q  418 catatttccctaaacat 434  Q
    ||||||| |||||||||    
T  44027 catattttcctaaacat 44043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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