View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4202_low_2 (Length: 648)
Name: NF4202_low_2
Description: NF4202
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4202_low_2 |
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Alignment Details
Target: chr6 (Bit Score: 325; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 294 - 630
Target Start/End: Complemental strand, 23118973 - 23118637
Alignment:
| Q |
294 |
caatattttgagcaatttaatactcctccagatcaccctccggaacaaaatctagatcgatctccgattctttaggagtatcaacaactgcttgaagact |
393 |
Q |
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| T |
23118973 |
caatattttgagcaatttaatactcctccagatcactctccggaacaaaatctagatcgatctccgattctttaggagtatcaacaactgcttgaagact |
23118874 |
T |
|
| Q |
394 |
ttggaaatcaatatgctgccttttctgctcaagaagccagtgatgtgcttaagagcttaacatcacaccctttcacaacccaacaggttactaagttgtc |
493 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
23118873 |
ttggaaatcaatatgctgccttttctgctcaaaaagccagtgatgtgcttaagagcttcacatcacaccctttcacaacccaacaggttactaagttgtc |
23118774 |
T |
|
| Q |
494 |
tcatctattcatctcaccaccaaaacacaacttttctaaattattcaaaccagattcagtgaataagttttttaatcaaattcaatatgatacttatgtc |
593 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23118773 |
tcatctattcatctcaccaccaaaacacaacttttctaaattattcaaaccagattcagtgaataagttttttaatcaaattcaatatgatacttatgtc |
23118674 |
T |
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| Q |
594 |
ccaatgagatcttttaggactcttcagtctacttgtt |
630 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
23118673 |
ccaatgagatcttttaggactcttcagtctacttgtt |
23118637 |
T |
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