View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4203_high_9 (Length: 248)
Name: NF4203_high_9
Description: NF4203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4203_high_9 |
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Alignment Details
Target: chr1 (Bit Score: 139; Significance: 8e-73; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 85 - 227
Target Start/End: Complemental strand, 4858919 - 4858777
Alignment:
| Q |
85 |
gaaggagcaaaatagtaattgactcctgctgtactcattgagtaataatggagtaattttatattcgaattcttcttgatgaatgggaaaatatgtcctt |
184 |
Q |
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| T |
4858919 |
gaaggagcaaaatagtaattgactcctgctgtactcattgagtaataatggagtaattttatattcgaattcttcttgatgaatgggaaaatatgtcctt |
4858820 |
T |
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| Q |
185 |
gaagctcatgcatggaggaccatagcatggttgatgagccatg |
227 |
Q |
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| T |
4858819 |
gaagctcatgcatggaggaccataacatggttgatgagccatg |
4858777 |
T |
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