View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4203_low_15 (Length: 245)
Name: NF4203_low_15
Description: NF4203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4203_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 61 - 214
Target Start/End: Original strand, 3447994 - 3448147
Alignment:
| Q |
61 |
gaaggagaaaataaaccgtgtgcgctcattgctcaacaaatttcttaaaagagattagtcacgacttggcggcaatgttggagactttgtactcataagt |
160 |
Q |
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| T |
3447994 |
gaaggagaaaataaaccgtgtgcgctcattgctcaacaaatttcttaaaagagattagtcacaactcggcggcaatgttggagactttgtactcataagt |
3448093 |
T |
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| Q |
161 |
cataatatggttgctaaactaaagagctatctaaatgtaagacaatgacaatga |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3448094 |
cataatatggttgctaaactaaagagctatctaaatgtaagacaatgacaatga |
3448147 |
T |
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