View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4205_low_30 (Length: 291)

Name: NF4205_low_30
Description: NF4205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4205_low_30
NF4205_low_30
[»] chr3 (33 HSPs)
chr3 (9-222)||(52823833-52824046)
chr3 (225-291)||(54868929-54868995)
chr3 (222-291)||(53982008-53982077)
chr3 (225-291)||(11095387-11095453)
chr3 (225-291)||(49607414-49607480)
chr3 (224-291)||(33644199-33644266)
chr3 (225-291)||(17470405-17470471)
chr3 (230-291)||(52629305-52629366)
chr3 (220-291)||(26141566-26141637)
chr3 (225-287)||(24699992-24700054)
chr3 (225-291)||(27714925-27714991)
chr3 (226-291)||(31456690-31456755)
chr3 (225-291)||(8076393-8076459)
chr3 (225-291)||(33118885-33118951)
chr3 (225-291)||(36707458-36707524)
chr3 (225-291)||(47531865-47531931)
chr3 (225-290)||(14623874-14623939)
chr3 (225-291)||(35536626-35536692)
chr3 (229-291)||(48587125-48587187)
chr3 (225-291)||(51419394-51419460)
chr3 (230-290)||(26754700-26754760)
chr3 (225-291)||(8956762-8956828)
chr3 (225-291)||(11347956-11348022)
chr3 (224-290)||(30801768-30801834)
chr3 (225-287)||(36331416-36331478)
chr3 (224-290)||(45058588-45058653)
chr3 (226-291)||(13898089-13898154)
chr3 (224-291)||(20764949-20765016)
chr3 (225-288)||(41080709-41080771)
chr3 (225-291)||(9562999-9563065)
chr3 (225-291)||(41189798-41189864)
chr3 (225-291)||(35965808-35965874)
chr3 (225-290)||(11907371-11907436)
[»] chr8 (30 HSPs)
chr8 (223-291)||(504155-504223)
chr8 (222-291)||(23122631-23122700)
chr8 (223-291)||(15197331-15197399)
chr8 (215-291)||(34012330-34012406)
chr8 (225-291)||(1179974-1180040)
chr8 (225-291)||(12831047-12831113)
chr8 (225-291)||(14547922-14547988)
chr8 (224-291)||(40423977-40424044)
chr8 (225-291)||(37038479-37038545)
chr8 (226-291)||(5957831-5957896)
chr8 (223-291)||(43414615-43414683)
chr8 (220-291)||(20074968-20075039)
chr8 (225-291)||(44507121-44507187)
chr8 (230-291)||(10621121-10621182)
chr8 (225-290)||(16383377-16383442)
chr8 (225-290)||(34307216-34307281)
chr8 (224-291)||(15048216-15048282)
chr8 (225-290)||(30479509-30479574)
chr8 (220-288)||(24307830-24307898)
chr8 (225-288)||(4854900-4854963)
chr8 (225-288)||(24307629-24307692)
chr8 (225-291)||(10284665-10284731)
chr8 (226-263)||(9122196-9122233)
chr8 (225-290)||(17443825-17443890)
chr8 (225-290)||(32032725-32032789)
chr8 (244-291)||(8841466-8841513)
chr8 (220-290)||(15258964-15259034)
chr8 (225-291)||(42221515-42221581)
chr8 (225-286)||(14055631-14055692)
chr8 (225-290)||(16056436-16056501)
[»] chr7 (35 HSPs)
chr7 (225-288)||(4999551-4999614)
chr7 (223-291)||(19329840-19329908)
chr7 (228-291)||(3783998-3784061)
chr7 (220-291)||(7389384-7389455)
chr7 (225-291)||(19436221-19436287)
chr7 (225-291)||(36361947-36362013)
chr7 (223-291)||(35137531-35137599)
chr7 (224-291)||(38267039-38267106)
chr7 (225-291)||(3434562-3434628)
chr7 (225-291)||(8080417-8080483)
chr7 (225-291)||(10343597-10343663)
chr7 (225-291)||(36362026-36362092)
chr7 (225-291)||(38837217-38837283)
chr7 (225-291)||(40957707-40957773)
chr7 (225-290)||(22343361-22343426)
chr7 (225-286)||(35468894-35468955)
chr7 (223-291)||(3694365-3694433)
chr7 (223-290)||(8238210-8238278)
chr7 (225-291)||(18207180-18207246)
chr7 (225-291)||(46374836-46374902)
chr7 (230-291)||(35522881-35522942)
chr7 (225-290)||(38044197-38044262)
chr7 (225-290)||(41915741-41915806)
chr7 (223-291)||(21234399-21234467)
chr7 (224-291)||(39255957-39256024)
chr7 (224-290)||(32564461-32564527)
chr7 (224-290)||(41423681-41423747)
chr7 (225-274)||(11044188-11044237)
chr7 (226-291)||(32951527-32951592)
chr7 (223-281)||(31735882-31735940)
chr7 (225-291)||(46033835-46033901)
chr7 (225-290)||(7727906-7727971)
chr7 (225-290)||(36208173-36208238)
chr7 (225-286)||(40846152-40846213)
chr7 (230-289)||(2318279-2318338)
[»] chr5 (24 HSPs)
chr5 (224-291)||(35785198-35785265)
chr5 (215-291)||(33149672-33149748)
chr5 (228-291)||(18520918-18520981)
chr5 (225-291)||(2740274-2740340)
chr5 (225-291)||(36732976-36733042)
chr5 (222-291)||(40145404-40145473)
chr5 (223-291)||(14831812-14831880)
chr5 (223-291)||(28177773-28177841)
chr5 (223-291)||(42414336-42414404)
chr5 (225-291)||(6679698-6679764)
chr5 (225-291)||(13811652-13811718)
chr5 (225-291)||(35943926-35943992)
chr5 (226-284)||(36875644-36875702)
chr5 (225-290)||(3921300-3921365)
chr5 (225-290)||(2252203-2252268)
chr5 (224-291)||(26720515-26720582)
chr5 (224-291)||(26990264-26990331)
chr5 (225-291)||(15409644-15409710)
chr5 (220-288)||(39688934-39689002)
chr5 (230-288)||(10356639-10356698)
chr5 (225-291)||(33825358-33825424)
chr5 (225-286)||(20073555-20073616)
chr5 (224-291)||(6260035-6260102)
chr5 (226-291)||(16327902-16327967)
[»] chr2 (33 HSPs)
chr2 (220-291)||(28381689-28381760)
chr2 (224-291)||(40701477-40701544)
chr2 (225-291)||(7465769-7465835)
chr2 (225-291)||(17473020-17473086)
chr2 (225-291)||(9058480-9058546)
chr2 (225-291)||(10249416-10249482)
chr2 (225-291)||(32505682-32505748)
chr2 (225-291)||(33436211-33436277)
chr2 (224-291)||(4060684-4060751)
chr2 (228-291)||(28863458-28863521)
chr2 (225-291)||(33436134-33436200)
chr2 (223-291)||(13438341-13438409)
chr2 (223-291)||(19930854-19930922)
chr2 (223-291)||(27864702-27864770)
chr2 (223-291)||(40613936-40614004)
chr2 (225-291)||(5574522-5574588)
chr2 (225-291)||(30915463-30915529)
chr2 (225-291)||(38273176-38273242)
chr2 (225-291)||(38882848-38882913)
chr2 (223-290)||(43490119-43490186)
chr2 (225-291)||(20700815-20700881)
chr2 (225-290)||(26891539-26891604)
chr2 (226-290)||(41575138-41575202)
chr2 (224-290)||(17820039-17820105)
chr2 (225-291)||(42257193-42257259)
chr2 (241-290)||(13365369-13365418)
chr2 (243-290)||(2997522-2997569)
chr2 (225-291)||(2533124-2533189)
chr2 (225-291)||(36168836-36168902)
chr2 (225-290)||(38732354-38732419)
chr2 (225-290)||(45097770-45097835)
chr2 (231-286)||(3439985-3440040)
chr2 (220-248)||(28863614-28863642)
[»] chr1 (30 HSPs)
chr1 (222-291)||(27564769-27564838)
chr1 (224-291)||(9474910-9474977)
chr1 (225-291)||(2581915-2581981)
chr1 (224-291)||(48716316-48716383)
chr1 (225-291)||(3000319-3000385)
chr1 (225-291)||(38632355-38632421)
chr1 (223-291)||(47452354-47452422)
chr1 (225-291)||(8346422-8346488)
chr1 (225-291)||(38595154-38595220)
chr1 (225-291)||(41758805-41758871)
chr1 (225-291)||(51898717-51898783)
chr1 (223-291)||(37649196-37649264)
chr1 (225-291)||(32813247-32813313)
chr1 (224-290)||(50591035-50591101)
chr1 (225-290)||(5959035-5959100)
chr1 (228-291)||(44548410-44548473)
chr1 (225-291)||(50630458-50630524)
chr1 (223-291)||(26440732-26440800)
chr1 (228-291)||(26274435-26274498)
chr1 (225-291)||(43132-43198)
chr1 (225-291)||(23597125-23597191)
chr1 (224-290)||(41608528-41608594)
chr1 (225-291)||(49811561-49811627)
chr1 (226-291)||(11152412-11152476)
chr1 (230-290)||(44453984-44454044)
chr1 (215-290)||(45044595-45044670)
chr1 (225-291)||(37926472-37926538)
chr1 (223-290)||(47748441-47748507)
chr1 (230-291)||(34340073-34340133)
chr1 (255-291)||(13414791-13414827)
[»] chr6 (21 HSPs)
chr6 (223-291)||(17598552-17598620)
chr6 (220-291)||(32869673-32869744)
chr6 (225-291)||(29857827-29857893)
chr6 (228-291)||(22880692-22880755)
chr6 (224-291)||(31109434-31109501)
chr6 (225-287)||(6209503-6209565)
chr6 (224-290)||(15508059-15508125)
chr6 (225-291)||(11427616-11427684)
chr6 (225-290)||(15990077-15990142)
chr6 (225-290)||(30341395-30341460)
chr6 (223-290)||(31953065-31953132)
chr6 (225-291)||(31976248-31976314)
chr6 (225-291)||(15832577-15832643)
chr6 (229-291)||(28536520-28536582)
chr6 (225-291)||(31110795-31110859)
chr6 (226-291)||(946377-946442)
chr6 (230-291)||(9379746-9379807)
chr6 (225-290)||(22422053-22422118)
chr6 (224-291)||(4231547-4231614)
chr6 (228-291)||(23128161-23128224)
chr6 (225-291)||(12732482-12732548)
[»] scaffold0237 (1 HSPs)
scaffold0237 (225-291)||(4029-4095)
[»] chr4 (34 HSPs)
chr4 (224-290)||(6034043-6034109)
chr4 (225-291)||(41236347-41236413)
chr4 (224-291)||(11511496-11511563)
chr4 (225-291)||(480481-480547)
chr4 (225-291)||(23608235-23608301)
chr4 (225-291)||(48183083-48183149)
chr4 (225-291)||(50052462-50052528)
chr4 (223-291)||(3481652-3481720)
chr4 (224-291)||(50526205-50526272)
chr4 (224-291)||(54473567-54473634)
chr4 (225-291)||(29234279-29234345)
chr4 (225-291)||(29239886-29239952)
chr4 (223-291)||(40574777-40574845)
chr4 (225-291)||(24995141-24995207)
chr4 (225-291)||(42044401-42044467)
chr4 (225-290)||(55079749-55079814)
chr4 (225-290)||(55475191-55475256)
chr4 (224-291)||(31910191-31910258)
chr4 (225-290)||(19670751-19670816)
chr4 (220-290)||(29547994-29548064)
chr4 (225-290)||(32766958-32767023)
chr4 (225-290)||(47986208-47986273)
chr4 (225-290)||(50813927-50813992)
chr4 (243-290)||(17983778-17983825)
chr4 (216-290)||(18924530-18924604)
chr4 (225-291)||(29977885-29977951)
chr4 (225-291)||(47104544-47104610)
chr4 (225-290)||(8343198-8343263)
chr4 (233-288)||(29589777-29589831)
chr4 (233-290)||(28480303-28480360)
chr4 (233-290)||(28481178-28481235)
chr4 (233-290)||(28482053-28482110)
chr4 (225-290)||(44536781-44536845)
chr4 (230-291)||(53352600-53352660)
[»] scaffold1268 (1 HSPs)
scaffold1268 (223-291)||(963-1031)
[»] scaffold1267 (1 HSPs)
scaffold1267 (223-291)||(963-1031)
[»] scaffold0321 (1 HSPs)
scaffold0321 (225-291)||(10143-10209)
[»] scaffold0018 (1 HSPs)
scaffold0018 (241-290)||(152514-152563)


Alignment Details
Target: chr3 (Bit Score: 206; Significance: 1e-113; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 52823833 - 52824046
Alignment:
Q  9 cttctctctcgaccaccctaattctcccaaccatttccctctctgcgatatttgcctcgtaattctctccaatatttatgcatactaaacttgttatata 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  52823833 cttctctctcgaccaccctaattctcccaaccatttccctctctgcgatatttgcctcgtaattctctccaatatttatgtatactaatcttgttatata 52823932  T
Q  109 tagaaagagactatatagtattaatttcatttaactatatcaactcatgaatttattataataatgatacattggatttgtttctttgtttgtaggaaag 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52823933 tagaaagagactatatagtattaatttcatttaactatatcaactcatgaatttattataataatgatacattggatttgtttctttgtttgtaggaaag 52824032  T
Q  209 aagaggttttgttt 222  Q
    ||||||||||||||    
T  52824033 aagaggttttgttt 52824046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 54868995 - 54868929
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  54868995 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacac 54868929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 53982008 - 53982077
Alignment:
Q  222 tatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  53982008 tatgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacac 53982077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 11095453 - 11095387
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  11095453 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacac 11095387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 49607414 - 49607480
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  49607414 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacac 49607480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 224 - 291
Target Start/End: Original strand, 33644199 - 33644266
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||    
T  33644199 tgagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacac 33644266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 17470405 - 17470471
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||    
T  17470405 gagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacac 17470471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 230 - 291
Target Start/End: Original strand, 52629305 - 52629366
Alignment:
Q  230 atgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  52629305 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacac 52629366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 220 - 291
Target Start/End: Complemental strand, 26141637 - 26141566
Alignment:
Q  220 tttatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||| |||||||||||||| |||||| |||||||||||| ||| |||||||||||||||||||||||    
T  26141637 tttatgagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacac 26141566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 287
Target Start/End: Complemental strand, 24700054 - 24699992
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctg 287  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||    
T  24700054 gagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctg 24699992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 27714991 - 27714925
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||||||||||    
T  27714991 gagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacac 27714925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 226 - 291
Target Start/End: Original strand, 31456690 - 31456755
Alignment:
Q  226 agtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||| |||  ||||||||||| |||||||||||||||||||||||||||    
T  31456690 agtaatgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacac 31456755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 8076393 - 8076459
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||| |||||||||| ||||| |||||| |||||||||||||||||||||| ||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacac 8076459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 33118951 - 33118885
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||| ||||||||||||||||||||| || ||||||||| |||||||||||||||||||| ||||||    
T  33118951 gagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacac 33118885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 36707524 - 36707458
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||| |||||||| || ||||||||| ||||||| |||||||||||||||||||    
T  36707524 gagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacac 36707458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 47531865 - 47531931
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||| |||||||||||||| ||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacac 47531931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 14623939 - 14623874
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    ||||||||||||||||||| |||||| ||||||||||||  |||||||||||| ||||||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgaca 14623874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 35536626 - 35536692
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||| |||||  |||||||||||| ||||||||||||| |||||| ||||||    
T  35536626 gagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacac 35536692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 291
Target Start/End: Complemental strand, 48587187 - 48587125
Alignment:
Q  229 aatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||| |||||||| |||||||||||| ||||||||| ||| |||||||||||||    
T  48587187 aatgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacac 48587125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 51419460 - 51419394
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||| |||||||||||||| ||||||||| ||||||| | ||| |||||||||||||||||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacac 51419394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 290
Target Start/End: Original strand, 26754700 - 26754760
Alignment:
Q  230 atgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    ||||| ||||||||||||||| |||||||||||| || |||| ||||||||||||||||||    
T  26754700 atgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgaca 26754760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 8956762 - 8956828
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||| |||||  |||||||||| | ||||||||||||| |||||| ||||||    
T  8956762 gagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacac 8956828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 11348022 - 11347956
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||| |||||||||||||| |||||| || ||||||| | ||||||| |||||||||||||||||||    
T  11348022 gagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacac 11347956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 224 - 290
Target Start/End: Complemental strand, 30801834 - 30801768
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||||||||||||||||||||| ||  |||||||| ||||| |||||||||||||| |||||    
T  30801834 tgagcaatgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgaca 30801768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 287
Target Start/End: Complemental strand, 36331478 - 36331416
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctg 287  Q
    |||| |||||||||| |||||||||||||||||| ||||  |||||| |||||||||||||||    
T  36331478 gagttatgatacataaacacccttagatggcaatgcaccccttgacatccacacaaaaatctg 36331416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 224 - 290
Target Start/End: Complemental strand, 45058653 - 45058588
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    ||||| |||||||||| |||||||||| ||||||||||||  |||||||||||| ||||||||||||    
T  45058653 tgagttatgatacataaacacccttaggtggcaatacacc-cttgacacccacataaaaatctgaca 45058588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 291
Target Start/End: Complemental strand, 13898154 - 13898089
Alignment:
Q  226 agtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||| ||| ||| |||||| ||||||||||||  |||||||||||| |||||||||||||    
T  13898154 agtaatgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacac 13898089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 291
Target Start/End: Complemental strand, 20765016 - 20764949
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||| |||| ||||||||| |||||| ||| |||||||  ||| |||||||||||||||||||||||    
T  20765016 tgagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacac 20764949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 288
Target Start/End: Original strand, 41080709 - 41080771
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctga 288  Q
    ||||||||||||||||||| |||||| | |||| ||||| |||||||||||| |||||||||||    
T  41080709 gagtaatgatacatagacatccttag-tagcaaaacaccctttgacacccacgcaaaaatctga 41080771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 9562999 - 9563065
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||| ||||| ||||||| ||||||| | ||||||| ||| | |||||||||||||    
T  9562999 gagtaatgatacataaacaccattagatgacaatacaacctttgacatccatataaaaatctgacac 9563065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 41189864 - 41189798
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||| |||||||||| ||| |||||| |||||||||| | ||||||||||||| |||||| ||||||    
T  41189864 gagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacac 41189798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 35965874 - 35965808
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||| ||| |||||  ||  |||||| | ||||||||||||| |||||||||||||    
T  35965874 gagtaatgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgacac 35965808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 11907371 - 11907436
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| ||||||||||||||||||||| || ||||||||   |  |||| |||||||||||||||||    
T  11907371 gagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgaca 11907436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 504223 - 504155
Alignment:
Q  223 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  504223 atgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacac 504155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 23122700 - 23122631
Alignment:
Q  222 tatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  23122700 tatgagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacac 23122631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 15197331 - 15197399
Alignment:
Q  223 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||    
T  15197331 atgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacac 15197399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 215 - 291
Target Start/End: Complemental strand, 34012406 - 34012330
Alignment:
Q  215 ttttgtttatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||| ||||||    
T  34012406 ttttttttatgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacac 34012330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 1180040 - 1179974
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacac 1179974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 12831047 - 12831113
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacac 12831113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 14547922 - 14547988
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  14547922 gagtaaagatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacac 14547988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 224 - 291
Target Start/End: Complemental strand, 40424044 - 40423977
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||| |||||||| |||||||||||| ||||||| |||||||||||||||||||    
T  40424044 tgagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacac 40423977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 37038479 - 37038545
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||| | |||| |||||||||||| |||||||||||||||||||||||||||    
T  37038479 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacac 37038545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 226 - 291
Target Start/End: Original strand, 5957831 - 5957896
Alignment:
Q  226 agtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||  ||||| |||||||||||| |||||||||||||||||||||||||||    
T  5957831 agtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacac 5957896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 43414683 - 43414615
Alignment:
Q  223 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||| |||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||| ||||    
T  43414683 atgagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacac 43414615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 291
Target Start/End: Complemental strand, 20075039 - 20074968
Alignment:
Q  220 tttatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||| |||||| |||||||||||  ||||||||||||| |||||| ||||||    
T  20075039 tttatgagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgacac 20074968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 44507187 - 44507121
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||| ||| |||||||  ||| |||||||||||||||||||||||    
T  44507187 gagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacac 44507121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 291
Target Start/End: Complemental strand, 10621182 - 10621121
Alignment:
Q  230 atgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||| |||||| ||| |||||||| |||||||||||||||||||||||||||    
T  10621182 atgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacac 10621121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 16383377 - 16383442
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  16383377 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 16383442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 34307216 - 34307281
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  34307216 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 34307281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 224 - 291
Target Start/End: Complemental strand, 15048282 - 15048216
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||| |||||||||||||| |||||| |||||||||||| ||||||| |||||||||||||||||||    
T  15048282 tgagttatgatacatagacatccttaggtggcaatacaccctttgaca-ccacacaaaaatctgacac 15048216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 30479574 - 30479509
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||||||||| |||||||||| |||||||||||| ||||||| ||||| ||||||||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgaca 30479509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 24307898 - 24307830
Alignment:
Q  220 tttatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctga 288  Q
    |||| |||| |||||||||| |||||||||| |||||||||| |  |||||||||||||||||||||||    
T  24307898 tttaagagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctga 24307830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 4854963 - 4854900
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctga 288  Q
    ||||||||||||||||||| |||||| |||||||||||| ||| ||||| ||| ||||||||||    
T  4854963 gagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctga 4854900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 288
Target Start/End: Original strand, 24307629 - 24307692
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctga 288  Q
    |||| |||||||||| |||||||||| |||||||||| |  |||||||||||||||||||||||    
T  24307629 gagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 10284731 - 10284665
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||| ||||||||||||||||||||  || ||||||||  |||||||||||||||||||| ||||||    
T  10284731 gagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacac 10284665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 9122196 - 9122233
Alignment:
Q  226 agtaatgatacatagacacccttagatggcaatacacc 263  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  9122196 agtaatgatacatagacacccttaggtggcaatacacc 9122233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 17443825 - 17443890
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||||||||||||| |||||| || |||||||| | || |||| |||||||||||||||||    
T  17443825 gagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgaca 17443890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 32032725 - 32032789
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||||||||| |||||||||| |||||||||| | || |||| ||||||||||||||||||    
T  32032725 gagttatgatacataaacacccttaggtggcaatacatcctt-gacatccacacaaaaatctgaca 32032789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 291
Target Start/End: Complemental strand, 8841513 - 8841466
Alignment:
Q  244 cccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||| ||||| |||||| |||||||||||||||||||||| ||||    
T  8841513 cccttaggtggcagtacaccctttgacacccacacaaaaatctaacac 8841466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 290
Target Start/End: Complemental strand, 15259034 - 15258964
Alignment:
Q  220 tttatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||| |||||||||||| || |||||||||||||||| |  | |||| ||||| ||||||||||||    
T  15259034 tttaagagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgaca 15258964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 42221515 - 42221581
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||| ||| |||||| || |||||||    | ||||||||||||||||||||||||    
T  42221515 gagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacac 42221581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 14055692 - 14055631
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatct 286  Q
    |||| ||||||||| ||||||||||| || ||||||||   |||||| ||||||||||||||    
T  14055692 gagttatgatacattgacacccttaggtgacaatacactccttgacatccacacaaaaatct 14055631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 16056501 - 16056436
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||||||||| ||| |||||  || ||||||| |  |||||||||||||||||||||||||    
T  16056501 gagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgaca 16056436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 5e-28; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 4999614 - 4999551
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctga 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctga 4999551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 19329840 - 19329908
Alignment:
Q  223 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  19329840 atgagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacac 19329908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 228 - 291
Target Start/End: Original strand, 3783998 - 3784061
Alignment:
Q  228 taatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  3783998 taatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacac 3784061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 220 - 291
Target Start/End: Original strand, 7389384 - 7389455
Alignment:
Q  220 tttatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||| |||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||    
T  7389384 tttaagagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacac 7389455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 19436287 - 19436221
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||    
T  19436287 gagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacac 19436221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 36362013 - 36361947
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||    
T  36362013 gagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacac 36361947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 35137531 - 35137599
Alignment:
Q  223 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||| ||||    
T  35137531 atgagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacac 35137599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 224 - 291
Target Start/End: Original strand, 38267039 - 38267106
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||||||||  || ||||||||| |||||||||||||||||||||||||||    
T  38267039 tgagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacac 38267106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 3434562 - 3434628
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||| |||||||    
T  3434562 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacac 3434628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 8080483 - 8080417
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||| ||| |||||||||||||    
T  8080483 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacac 8080417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 10343663 - 10343597
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||| ||| ||||||| | ||||||||||||||||||||||||||    
T  10343663 gagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacac 10343597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 36362026 - 36362092
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||| ||| |||||| | |||||||||||||||||||||||||||    
T  36362026 gagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacac 36362092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 38837217 - 38837283
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||| |||||||||||| ||  ||||| |||||||||||||||||    
T  38837217 gagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacac 38837283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 40957707 - 40957773
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||| ||||| |||||||||||  ||||| |||||||||||||||||||||    
T  40957707 gagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacac 40957773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 22343361 - 22343426
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  22343361 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 22343426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 35468955 - 35468894
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatct 286  Q
    ||||||||||||||||||| ||||||||||||||||| | ||||||||||||| ||||||||    
T  35468955 gagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatct 35468894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 3694365 - 3694433
Alignment:
Q  223 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||| |||||||| ||| |||||||||| || ||||||||||||| |||||||||||||||||||||||    
T  3694365 atgaataatgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacac 3694433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 290
Target Start/End: Original strand, 8238210 - 8238278
Alignment:
Q  223 atgagtaatgatacatagacaccct-tagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||||| |||||||||| ||||||| ||| |||||||||||| ||||||||||||||||||||||||||    
T  8238210 atgagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgaca 8238278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 18207180 - 18207246
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||| |||||||||||||| |||||| ||||||||||||| |||||||||| |||||||||| ||||    
T  18207180 gagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacac 18207246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 46374902 - 46374836
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||| |||||||||||||| |||||| |||||| ||||| ||| |||||||||||||||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacac 46374836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 230 - 291
Target Start/End: Original strand, 35522881 - 35522942
Alignment:
Q  230 atgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||| |||||  |||||||||||| ||| |||||||||||||||||||||||    
T  35522881 atgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacac 35522942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 38044197 - 38044262
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||||||||| |||||||||| ||||||||||||  |||||| ||||||||||||||||||    
T  38044197 gagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgaca 38044262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 41915741 - 41915806
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||||||||| |||||||||| ||||||||||||  |||||||| ||||||||||||||||    
T  41915741 gagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgaca 41915806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 21234399 - 21234467
Alignment:
Q  223 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||| |||||||||||||| |||||| || ||||||||| |||||||| ||||||||||| ||||||    
T  21234399 atgagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacac 21234467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 291
Target Start/End: Complemental strand, 39256024 - 39255957
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||| |||||||||||||| |||||| ||||||||||||  |||| ||||| |||||||||||||||    
T  39256024 tgagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacac 39255957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 224 - 290
Target Start/End: Complemental strand, 32564527 - 32564461
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    ||||| |||||||||| |||  ||||| ||||||||||||  |||||||||||||||||||||||||    
T  32564527 tgagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgaca 32564461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 224 - 290
Target Start/End: Original strand, 41423681 - 41423747
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    ||||| |||||||||||||| | |||||||| ||||||||| |||||||  ||||||||||||||||    
T  41423681 tgagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgaca 41423747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 274
Target Start/End: Original strand, 11044188 - 11044237
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacaccc 274  Q
    |||||||||||||||||||||||||| |||||||||| | ||||||||||    
T  11044188 gagtaatgatacatagacacccttaggtggcaatacatcctttgacaccc 11044237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 291
Target Start/End: Complemental strand, 32951592 - 32951527
Alignment:
Q  226 agtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||| |||||||| ||||||| | ||| ||| |||||||||||||| ||||    
T  32951592 agtaatgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacac 32951527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 281
Target Start/End: Original strand, 31735882 - 31735940
Alignment:
Q  223 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaa 281  Q
    |||||| |||||||||||||| |||||| |||||||||||  ||| |||||||||||||    
T  31735882 atgagttatgatacatagacatccttaggtggcaatacactctttaacacccacacaaa 31735940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 46033901 - 46033835
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||| |||||||||||| |  ||||| |||||||||||| ||| ||||||||| |||||||||||||    
T  46033901 gagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacac 46033835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 7727906 - 7727971
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||||||||| |||||||||| ||| ||||||||| ||||||  |||| ||||||||||||    
T  7727906 gagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgaca 7727971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 36208173 - 36208238
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| ||||||||||||||||||||| ||| ||||||    |||||||||||||||||| ||||||    
T  36208173 gagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgaca 36208238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 40846213 - 40846152
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatct 286  Q
    |||| |||||||||| ||| |||||| ||||||||||||  |||||| ||||||||||||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatct 40846152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 2318338 - 2318279
Alignment:
Q  230 atgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgac 289  Q
    |||||||||  ||| || ||| |||||| |||||| ||||||||||||||||||||||||    
T  2318338 atgatacattaacaaccataggtggcaagacacctcttgacacccacacaaaaatctgac 2318279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 5e-28; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 224 - 291
Target Start/End: Original strand, 35785198 - 35785265
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  35785198 tgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacac 35785265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 215 - 291
Target Start/End: Complemental strand, 33149748 - 33149672
Alignment:
Q  215 ttttgtttatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||| ||||||    
T  33149748 ttttttttatgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacac 33149672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 228 - 291
Target Start/End: Complemental strand, 18520981 - 18520918
Alignment:
Q  228 taatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  18520981 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacac 18520918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 2740274 - 2740340
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||    
T  2740274 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacac 2740340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 36733042 - 36732976
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||    
T  36733042 gagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacac 36732976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 40145404 - 40145473
Alignment:
Q  222 tatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||| ||| |||||||||||||||||||    
T  40145404 tatgagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacac 40145473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 14831812 - 14831880
Alignment:
Q  223 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||||||||||    
T  14831812 atgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacac 14831880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 28177773 - 28177841
Alignment:
Q  223 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||| |||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||    
T  28177773 atgagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacac 28177841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 42414404 - 42414336
Alignment:
Q  223 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||  ||| |||||||||||| |||||||||||||||||||||||||||    
T  42414404 atgagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacac 42414336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 6679698 - 6679764
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||| |||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||    
T  6679698 gagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacac 6679764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 13811652 - 13811718
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||| ||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||    
T  13811652 gagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacac 13811718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 35943992 - 35943926
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||| ||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacac 35943926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 226 - 284
Target Start/End: Complemental strand, 36875702 - 36875644
Alignment:
Q  226 agtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaat 284  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  36875702 agtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaat 36875644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 3921365 - 3921300
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  3921365 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 3921300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 2252268 - 2252203
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||||||||| ||| |||||| ||||||||||||  |||||||||||||||||||||||||    
T  2252268 gagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 2252203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 291
Target Start/End: Original strand, 26720515 - 26720582
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||| |||||||||||||| |||||| |||||||||||| ||| ||||| ||| |||||||||||||    
T  26720515 tgagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacac 26720582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 291
Target Start/End: Original strand, 26990264 - 26990331
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||| |||||||||||||| |||||| |||||||||||| ||| ||||| ||| |||||||||||||    
T  26990264 tgagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacac 26990331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 15409710 - 15409644
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||| |||||||||||||| |||||| || |||||||   |||||||||||||||||||||||||||    
T  15409710 gagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacac 15409644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 39689002 - 39688934
Alignment:
Q  220 tttatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctga 288  Q
    |||| |||| |||||||||| |||||||||  |||||||||| |  |||||||||||||||||||||||    
T  39689002 tttaagagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctga 39688934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 288
Target Start/End: Original strand, 10356639 - 10356698
Alignment:
Q  230 atgatacatagacacccttagatggcaataca-ccttttgacacccacacaaaaatctga 288  Q
    |||||||||||||| |||||| |||||||||| ||  |||||||||||||||||||||||    
T  10356639 atgatacatagacatccttaggtggcaatacatcccattgacacccacacaaaaatctga 10356698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 33825424 - 33825358
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||| ||||||||  ||||| |||||||||||   |||||||||||| |||||||||||||    
T  33825424 gagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgacac 33825358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 20073616 - 20073555
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatct 286  Q
    ||||||||||| ||||||| | ||||||| ||||||||| |||||||| |||| ||||||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatct 20073555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 224 - 291
Target Start/End: Complemental strand, 6260102 - 6260035
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||| ||| || ||| || ||||||||| ||| |||||||| ||||||||| ||||    
T  6260102 tgagtaatgatacatacacaaccataggtgacaatacaccctttaacacccacgcaaaaatctaacac 6260035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 291
Target Start/End: Original strand, 16327902 - 16327967
Alignment:
Q  226 agtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||| ||| | | |||||| |||||||||| |  |||||||||||| |||||||||||||    
T  16327902 agtaatgatagataaatatccttaggtggcaatacatccattgacacccacataaaaatctgacac 16327967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 5e-28; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 220 - 291
Target Start/End: Complemental strand, 28381760 - 28381689
Alignment:
Q  220 tttatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  28381760 tttatgagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacac 28381689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 224 - 291
Target Start/End: Original strand, 40701477 - 40701544
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  40701477 tgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacac 40701544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 7465835 - 7465769
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7465835 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacac 7465769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 17473020 - 17473086
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacac 17473086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 9058480 - 9058546
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  9058480 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacac 9058546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 10249482 - 10249416
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  10249482 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacac 10249416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 32505748 - 32505682
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  32505748 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacac 32505682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 33436211 - 33436277
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  33436211 gagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacac 33436277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 224 - 291
Target Start/End: Original strand, 4060684 - 4060751
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||    
T  4060684 tgagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacac 4060751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 228 - 291
Target Start/End: Original strand, 28863458 - 28863521
Alignment:
Q  228 taatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  28863458 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacac 28863521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 33436200 - 33436134
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||    
T  33436200 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacac 33436134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 13438341 - 13438409
Alignment:
Q  223 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||||| || ||||||| | |||||||||||||||||||||||||||    
T  13438341 atgagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacac 13438409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 19930922 - 19930854
Alignment:
Q  223 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||    
T  19930922 atgaataatgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacac 19930854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 27864702 - 27864770
Alignment:
Q  223 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||| |||||||||||||||||||    
T  27864702 atgagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacac 27864770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 40614004 - 40613936
Alignment:
Q  223 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||| |||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||    
T  40614004 atgagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacac 40613936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 5574588 - 5574522
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||||||||||    
T  5574588 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacac 5574522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 30915463 - 30915529
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||| |||||||||||| |||||| |||||| |||||||||||||    
T  30915463 gagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacac 30915529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 38273242 - 38273176
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||| ||||||||||||||  |||||||||||||||||| ||| |||||||||||||||||||||||    
T  38273242 gagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacac 38273176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 38882913 - 38882848
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||| |||||||| ||| ||||||| |||||||||||||||||||    
T  38882913 gagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacac 38882848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 290
Target Start/End: Original strand, 43490119 - 43490186
Alignment:
Q  223 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||||| |||||||||| |||||||||| || |||||||||  |||||||||||||||||||||||||    
T  43490119 atgagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgaca 43490186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 20700815 - 20700881
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||| |||||  |||||||||||| |||||| || |||||||||||||||||    
T  20700815 gagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacac 20700881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 26891604 - 26891539
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| ||||||||||| ||||||||| ||||||||||||  | |||||||||||||||||||||||    
T  26891604 gagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgaca 26891539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 290
Target Start/End: Original strand, 41575138 - 41575202
Alignment:
Q  226 agtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||||||||||||||||| |||||||||| |||||||| |||||||  ||||||||||| |||||    
T  41575138 agtaatgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgaca 41575202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 224 - 290
Target Start/End: Complemental strand, 17820105 - 17820039
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    ||||| |||||||||||||| |  ||| ||||||||||||  |||||||||||||||||||||||||    
T  17820105 tgagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgaca 17820039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 42257193 - 42257259
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||| |||||||||||||| | |||| |||||||||| | ||||||||||||| |||||||||||||    
T  42257193 gagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacac 42257259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 290
Target Start/End: Original strand, 13365369 - 13365418
Alignment:
Q  241 acacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||||||    
T  13365369 acacccttagatggcaatataccccttgacacccacacaaaaatctgaca 13365418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 290
Target Start/End: Complemental strand, 2997569 - 2997522
Alignment:
Q  243 acccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||||||| ||||||||||||  |||||||||||||||||||||||||    
T  2997569 acccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 2997522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 2533124 - 2533189
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||| |||||||||||||| |||||  |||||||||| | ||||||| |||||||||||||||||||    
T  2533124 gagttatgatacatagacatccttaagtggcaatacatcctttgaca-ccacacaaaaatctgacac 2533189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 36168836 - 36168902
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||| |||||||||||||| ||||||||| ||||||| | ||| || ||||||||||||| ||||||    
T  36168836 gagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacac 36168902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 38732354 - 38732419
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||||||||| |||||||||  || ||||||| |  |||||||||||||||||||||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgaca 38732419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 45097835 - 45097770
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||||||||| ||| |||||| |||||||||| |  |||||||||| ||||||||||||||    
T  45097835 gagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgaca 45097770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 231 - 286
Target Start/End: Original strand, 3439985 - 3440040
Alignment:
Q  231 tgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatct 286  Q
    |||||| ||||||||||||| |||||||||||   | |||||||||||||||||||    
T  3439985 tgatacgtagacacccttaggtggcaatacactcctggacacccacacaaaaatct 3440040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 248
Target Start/End: Complemental strand, 28863642 - 28863614
Alignment:
Q  220 tttatgagtaatgatacatagacaccctt 248  Q
    |||||||||||||||||||||||||||||    
T  28863642 tttatgagtaatgatacatagacaccctt 28863614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 8e-27; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 27564838 - 27564769
Alignment:
Q  222 tatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  27564838 tatgagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacac 27564769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 224 - 291
Target Start/End: Complemental strand, 9474977 - 9474910
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  9474977 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacac 9474910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 2581915 - 2581981
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  2581915 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacac 2581981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 224 - 291
Target Start/End: Complemental strand, 48716383 - 48716316
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||    
T  48716383 tgagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacac 48716316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 3000319 - 3000385
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacac 3000385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 38632421 - 38632355
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||    
T  38632421 gagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacac 38632355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 47452422 - 47452354
Alignment:
Q  223 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||| ||||    
T  47452422 atgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacac 47452354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 8346488 - 8346422
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||| |||| |||| |||||||||||| |||||||||||||||||||||||||||    
T  8346488 gagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacac 8346422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 38595154 - 38595220
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||| ||||| |||| |||||||||||| |||||||||||||||||||||||||||    
T  38595154 gagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacac 38595220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 41758805 - 41758871
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||| ||| ||||||||||||| ||||||| |||||||||||||||||||    
T  41758805 gagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacac 41758871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 51898783 - 51898717
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||| | |||| |||||||||||| |||||||||||||||||||||||||||    
T  51898783 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacac 51898717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 37649196 - 37649264
Alignment:
Q  223 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||| | |||| |||||||||||  |||||||||||||||||||||||||||    
T  37649196 atgagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacac 37649264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 32813247 - 32813313
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||| |||||||||||||| |||||| |||||||||||| ||| |||||||||||||||||||||||    
T  32813247 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacac 32813313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 224 - 290
Target Start/End: Complemental strand, 50591101 - 50591035
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    ||||| |||||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  50591101 tgagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 50591035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 5959100 - 5959035
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||||||||| |||||||||  ||||||||||||| |||||||||||||||||||||||||    
T  5959100 gagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgaca 5959035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 228 - 291
Target Start/End: Complemental strand, 44548473 - 44548410
Alignment:
Q  228 taatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||| | |||| |||||||||||| ||||| |||||||||||||||||||||    
T  44548473 taatgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacac 44548410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 50630458 - 50630524
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||| |||||||| |||||||||| | ||||  |||||||||||||||||||||    
T  50630458 gagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacac 50630524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 26440732 - 26440800
Alignment:
Q  223 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||| | |||| ||||||| ||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  26440732 atgagttaggatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacac 26440800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 291
Target Start/End: Original strand, 26274435 - 26274498
Alignment:
Q  228 taatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||||  |||||||||| | ||||||| ||||| |||||||||||||    
T  26274435 taatgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacac 26274498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 43132 - 43198
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||  |||||  | ||||||| | |||||||||||||||||||||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacac 43198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 23597191 - 23597125
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||| | |||| |||||||||||  ||||| ||||||| |||||||||||||    
T  23597191 gagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacac 23597125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 224 - 290
Target Start/End: Complemental strand, 41608594 - 41608528
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    ||||| |||||||||| ||| |||||| ||||||||||||  ||||||| |||||||||||||||||    
T  41608594 tgagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgaca 41608528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 49811627 - 49811561
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||| |||||| ||||||| |||||| || ||||||||| ||||||| |||||||||||||||||||    
T  49811627 gagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacac 49811561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 291
Target Start/End: Complemental strand, 11152476 - 11152412
Alignment:
Q  226 agtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||| ||||||||||| |||| |||||||||||| || |||| |||||||||||||||||||    
T  11152476 agtaatgaaacatagacacc-ttaggtggcaatacacccttcgacatccacacaaaaatctgacac 11152412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 290
Target Start/End: Original strand, 44453984 - 44454044
Alignment:
Q  230 atgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||||||||||||||| |||  |||||||||| || |||| ||||||||||||||||||||    
T  44453984 atgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgaca 44454044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 290
Target Start/End: Complemental strand, 45044670 - 45044595
Alignment:
Q  215 ttttgtttatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||| |||| |||||||||| |   |||||| |||||||||||| ||||||||||| ||||||||||||||    
T  45044670 ttttttttaagagttatgatacatacatttccttaggtggcaatacaccatttgacacccatacaaaaatctgaca 45044595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 37926538 - 37926472
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||| |||||||||||| | | |||| |||||||||| ||||| ||||||||| |||||||||||||    
T  37926538 gagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacac 37926472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 290
Target Start/End: Original strand, 47748441 - 47748507
Alignment:
Q  223 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||||| |||||||||| | |||||||| ||||||||||||  |||||||||| | ||||||||||||    
T  47748441 atgagttatgatacataaatacccttaggtggcaatacacc-cttgacacccatataaaaatctgaca 47748507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 291
Target Start/End: Complemental strand, 34340133 - 34340073
Alignment:
Q  230 atgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||| ||||| ||| ||||||||| ||||   |||||||||||||||||||    
T  34340133 atgatacatagacactcttaggtggtaatacacctgttga-tgccacacaaaaatctgacac 34340073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 291
Target Start/End: Original strand, 13414791 - 13414827
Alignment:
Q  255 caatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  13414791 caatacaccctttgacacccacacaaaaatctaacac 13414827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 17598552 - 17598620
Alignment:
Q  223 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  17598552 atgagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacac 17598620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 220 - 291
Target Start/End: Original strand, 32869673 - 32869744
Alignment:
Q  220 tttatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  32869673 tttatgagtaaagatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacac 32869744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 29857827 - 29857893
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacac 29857893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 228 - 291
Target Start/End: Complemental strand, 22880755 - 22880692
Alignment:
Q  228 taatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||    
T  22880755 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacac 22880692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 291
Target Start/End: Complemental strand, 31109501 - 31109434
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||  |||||||||||||| |||||||||||| ||||||| |||||||||||||||||||    
T  31109501 tgagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacac 31109434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 225 - 287
Target Start/End: Complemental strand, 6209565 - 6209503
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctg 287  Q
    |||||||||||||||||||||||||| |||||||||||  |||||||| ||||||||||||||    
T  6209565 gagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctg 6209503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 224 - 290
Target Start/End: Complemental strand, 15508125 - 15508059
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    ||||| |||||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  15508125 tgagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 15508059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 11427616 - 11427684
Alignment:
Q  225 gagtaatgatacatagacaccct--tagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||  ||| |||||||||| | |||||||||||||||||||||||||||    
T  11427616 gagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacac 11427684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 15990142 - 15990077
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  15990142 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 15990077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 30341460 - 30341395
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  30341460 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 30341395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 290
Target Start/End: Complemental strand, 31953132 - 31953065
Alignment:
Q  223 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    ||||||||||||| ||||||| |||||| ||||||||||||  |||||||||||| ||||||||||||    
T  31953132 atgagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgaca 31953065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 31976248 - 31976314
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||| |||||||||||||| |||||| |||||||| ||| ||| |||||||||||||||||||||||    
T  31976248 gagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacac 31976314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 15832577 - 15832643
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||| |||| || ||||| | | |||||||||||||||||||| ||||||    
T  15832577 gagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacac 15832643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 291
Target Start/End: Complemental strand, 28536582 - 28536520
Alignment:
Q  229 aatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||| ||| |||||| |||||||||| |  ||||||||||||||||||||||||||    
T  28536582 aatgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacac 28536520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 31110859 - 31110795
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||| |||||||||||||| |||||| |||||||||||| |||||||  | ||||||||||||||||    
T  31110859 gagttatgatacatagacatccttaggtggcaatacaccctttgaca--ctcacaaaaatctgacac 31110795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 226 - 291
Target Start/End: Original strand, 946377 - 946442
Alignment:
Q  226 agtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||| |||||||||||| |||||| ||  |||||||| ||||||||| || ||||||||||||||    
T  946377 agtaacgatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacac 946442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 291
Target Start/End: Complemental strand, 9379807 - 9379746
Alignment:
Q  230 atgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||| ||||||||| ||||||| |  |||||||||| |||||||| ||||||    
T  9379807 atgatacatagacatccttagatgacaatacatcccttgacacccatacaaaaatttgacac 9379746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 22422118 - 22422053
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    ||||||||||||||||||| |||||| |||||||| | || ||||||| || |||||| |||||||    
T  22422118 gagtaatgatacatagacatccttaggtggcaatagatctcttgacactcatacaaaattctgaca 22422053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 224 - 291
Target Start/End: Original strand, 4231547 - 4231614
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||| ||||| |||| ||| | |||| ||||||||||||  ||| ||||||||||||||||||||||    
T  4231547 tgagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacac 4231614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 291
Target Start/End: Complemental strand, 23128224 - 23128161
Alignment:
Q  228 taatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||| ||||||||| |||  ||  |||||| | |||||||||||||||||||||||||||    
T  23128224 taatgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacac 23128161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 12732482 - 12732548
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||  ||||  |||||||| |    ||||||||||||||||||||||||||    
T  12732482 gagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacac 12732548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 4029 - 4095
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacac 4095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 5e-25; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 224 - 290
Target Start/End: Original strand, 6034043 - 6034109
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  6034043 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 6034109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 41236347 - 41236413
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacac 41236413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 224 - 291
Target Start/End: Complemental strand, 11511563 - 11511496
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||    
T  11511563 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacac 11511496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 480547 - 480481
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||    
T  480547 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacac 480481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 23608235 - 23608301
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  23608235 gagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacac 23608301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 48183149 - 48183083
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||    
T  48183149 gagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacac 48183083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 50052528 - 50052462
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||    
T  50052528 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacac 50052462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 3481652 - 3481720
Alignment:
Q  223 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||||| |||| |||||||||||  |||||||||||||||||||||||||||    
T  3481652 atgagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacac 3481720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 224 - 291
Target Start/End: Complemental strand, 50526272 - 50526205
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||| | |||| |||||||||||| |||||||||||||||||||||||||||    
T  50526272 tgagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacac 50526205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 224 - 291
Target Start/End: Complemental strand, 54473634 - 54473567
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| ||||    
T  54473634 tgagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacac 54473567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 29234345 - 29234279
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||  ||||||||||||||||    
T  29234345 gagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacac 29234279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 29239886 - 29239952
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||| ||||    
T  29239886 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacac 29239952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 40574777 - 40574845
Alignment:
Q  223 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||| |||||||||||||| |||||| ||| |||||||| |||||||||||||||||||||||||||    
T  40574777 atgagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacac 40574845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 24995207 - 24995141
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||||||||| |||||| ||||||    
T  24995207 gagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacac 24995141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 42044467 - 42044401
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||||||||||||||||||||||||| |||||||||| | ||  |||||||||||||||||||||||    
T  42044467 gagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacac 42044401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 55079814 - 55079749
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||||||||| |||||||||| ||||||||||||| |||||||||| ||||||||||||||    
T  55079814 gagttatgatacataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgaca 55079749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 55475191 - 55475256
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||||||||| ||| |||||| |||||||||||| ||||||||||||||||||||||||||    
T  55475191 gagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 55475256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 224 - 291
Target Start/End: Original strand, 31910191 - 31910258
Alignment:
Q  224 tgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||| |||||||||||||| |||||| || ||||||||  |||||||||||||||||||||||||||    
T  31910191 tgagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacac 31910258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 19670816 - 19670751
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||||||||| |||||||||| ||||||||||||  ||||||| |||||||||||||||||    
T  19670816 gagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgaca 19670751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 290
Target Start/End: Complemental strand, 29548064 - 29547994
Alignment:
Q  220 tttatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||| |||||||||| ||| |||||| |||||||||| |  |||||||||||||||||||||||||    
T  29548064 tttaagagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgaca 29547994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 32766958 - 32767023
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||||||    
T  32766958 gagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgaca 32767023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 47986208 - 47986273
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||||||||| |||||||||| |||||||||| |  |||||| ||||||||||||||||||    
T  47986208 gagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgaca 47986273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 50813992 - 50813927
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||||||||| |||| ||||| ||| ||||||||  |||||||||||||||||||||||||    
T  50813992 gagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgaca 50813927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 290
Target Start/End: Complemental strand, 17983825 - 17983778
Alignment:
Q  243 acccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||||||| ||||||||||||  |||||||||||||||||||||||||    
T  17983825 acccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 17983778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 290
Target Start/End: Complemental strand, 18924604 - 18924530
Alignment:
Q  216 tttgtttatgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||||||| ||||| |||| | |||||||| ||||||||||||  |||| | ||||||||||||||||||    
T  18924604 tttgattatgagttatgatccataaatacccttaggtggcaatacaccccttgatatccacacaaaaatctgaca 18924530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 29977885 - 29977951
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||| | | || ||| ||||||||||||  || |||||||||||||||||||||||    
T  29977885 gagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacac 29977951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 47104544 - 47104610
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||| |||||||  |||||||| ||||||||  | |||||||||||||||||| ||||||    
T  47104544 gagtaatgatatatagacattcttagatgacaatacactctctgacacccacacaaaaatttgacac 47104610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 8343263 - 8343198
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||||||||| ||| |||||| |||||||||| | ||||||||| ||| ||||||||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgaca 8343198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 288
Target Start/End: Complemental strand, 29589831 - 29589777
Alignment:
Q  233 atacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctga 288  Q
    ||||||| |||||||||| || |||||||||  |||||||||||||||||||||||    
T  29589831 atacataaacacccttagttg-caatacaccccttgacacccacacaaaaatctga 29589777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 290
Target Start/End: Complemental strand, 28480360 - 28480303
Alignment:
Q  233 atacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    ||||||||||| |||||| || |||||||| | || |||| |||||||||||||||||    
T  28480360 atacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgaca 28480303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 290
Target Start/End: Complemental strand, 28481235 - 28481178
Alignment:
Q  233 atacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    ||||||||||| |||||| || |||||||| | || |||| |||||||||||||||||    
T  28481235 atacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgaca 28481178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 290
Target Start/End: Complemental strand, 28482110 - 28482053
Alignment:
Q  233 atacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    ||||||||||| |||||| || |||||||| | || |||| |||||||||||||||||    
T  28482110 atacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgaca 28482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 44536845 - 44536781
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||| |||||||||| ||||  |||| |||||||||||| || |||| ||||||||||||||||||    
T  44536845 gagttatgatacataaacacttttaggtggcaatacaccctt-gacatccacacaaaaatctgaca 44536781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 291
Target Start/End: Complemental strand, 53352660 - 53352600
Alignment:
Q  230 atgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||| | ||||||||   ||| ||||| |||||||||||||||||    
T  53352660 atgatacatagacacccttaggt-gcaatacattctttaacacctacacaaaaatctgacac 53352600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 1031 - 963
Alignment:
Q  223 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||| | |||| |||||||||||| ||| ||| ||||||||||| |||||||    
T  1031 atgagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacac 963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 1031 - 963
Alignment:
Q  223 atgagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    ||||||||||||||||||||| | |||| |||||||||||| ||| ||| ||||||||||| |||||||    
T  1031 atgagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacac 963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 10209 - 10143
Alignment:
Q  225 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgacac 291  Q
    |||| |||||||||||||||| |||| |||||||||| | ||||||| ||||| |||||||||||||    
T  10209 gagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacac 10143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 241 - 290
Target Start/End: Original strand, 152514 - 152563
Alignment:
Q  241 acacccttagatggcaatacaccttttgacacccacacaaaaatctgaca 290  Q
    |||||||| | ||||||||||||  |||||||||||||||||||||||||    
T  152514 acacccttgggtggcaatacaccccttgacacccacacaaaaatctgaca 152563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University