View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4206_low_8 (Length: 245)
Name: NF4206_low_8
Description: NF4206
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4206_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 44910931 - 44910705
Alignment:
| Q |
1 |
ccaataagagaaagaatctgaagcctaattctgagaaaaactagcaaaatatccgtacatattgcataggtgtaaaagaggacaatgtaatacaggttta |
100 |
Q |
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| T |
44910931 |
ccaataagagaaagaatctgaagcctaattctgagaaaaactagcaaaatatccgtacatattgcataggtgtaaaagaggataatgtaatacaggttta |
44910832 |
T |
|
| Q |
101 |
ttttctcttcatgtagacctctgtggaccccccttcccttttctggtcttgttaggtgatagtattagccctcatgacagagttttgtgaattcttgatt |
200 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44910831 |
ttttctctttatgtagacctctgtggaccccccttcccttttctggtcttgttaggtgatagtattagccctcatgacagagttttgtgaattcttgatt |
44910732 |
T |
|
| Q |
201 |
ttcctatatacatacggaacattggtc |
227 |
Q |
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||||||||||||||| ||||||||||| |
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| T |
44910731 |
ttcctatatacatacagaacattggtc |
44910705 |
T |
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