View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4212_high_4 (Length: 327)

Name: NF4212_high_4
Description: NF4212
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4212_high_4
NF4212_high_4
[»] chr7 (42 HSPs)
chr7 (105-308)||(3811438-3811641)
chr7 (105-308)||(3817580-3817783)
chr7 (105-308)||(351474-351677)
chr7 (105-308)||(5849217-5849420)
chr7 (105-305)||(35148281-35148481)
chr7 (105-308)||(339068-339270)
chr7 (105-308)||(26383356-26383559)
chr7 (105-308)||(22742198-22742402)
chr7 (105-308)||(28421228-28421431)
chr7 (105-256)||(35152850-35153001)
chr7 (150-309)||(43539709-43539871)
chr7 (119-277)||(42767505-42767661)
chr7 (105-308)||(5979443-5979648)
chr7 (202-308)||(15843730-15843837)
chr7 (202-308)||(15860839-15860946)
chr7 (230-308)||(20238762-20238841)
chr7 (138-267)||(7608146-7608276)
chr7 (105-179)||(18666881-18666958)
chr7 (105-309)||(26380795-26380975)
chr7 (253-308)||(35150810-35150865)
chr7 (106-307)||(18656923-18657120)
chr7 (45-104)||(25046240-25046299)
chr7 (45-101)||(11217071-11217127)
chr7 (52-104)||(36749254-36749306)
chr7 (45-104)||(12933419-12933478)
chr7 (111-154)||(24689729-24689772)
chr7 (45-104)||(35212068-35212127)
chr7 (45-104)||(42254958-42255017)
chr7 (225-262)||(15843687-15843724)
chr7 (225-262)||(15860796-15860833)
chr7 (51-104)||(30513286-30513339)
chr7 (166-227)||(8824546-8824608)
chr7 (122-177)||(16914037-16914092)
chr7 (45-104)||(24195607-24195666)
chr7 (45-96)||(25037758-25037809)
chr7 (52-103)||(31853549-31853600)
chr7 (45-104)||(32197909-32197968)
chr7 (45-104)||(41693645-41693704)
chr7 (45-103)||(31489935-31489993)
chr7 (54-104)||(39619800-39619850)
chr7 (45-101)||(32544774-32544830)
chr7 (45-101)||(40578230-40578286)
[»] chr3 (56 HSPs)
chr3 (105-308)||(10769238-10769442)
chr3 (105-306)||(49151299-49151500)
chr3 (105-306)||(49157366-49157567)
chr3 (105-308)||(38449332-38449536)
chr3 (105-308)||(38455819-38456023)
chr3 (105-308)||(10760919-10761123)
chr3 (105-307)||(28964567-28964769)
chr3 (105-308)||(8331474-8331677)
chr3 (105-308)||(30051371-30051573)
chr3 (105-308)||(10238481-10238685)
chr3 (105-308)||(10244603-10244807)
chr3 (105-308)||(11839994-11840198)
chr3 (105-308)||(26429686-26429890)
chr3 (105-308)||(42191489-42191693)
chr3 (105-308)||(42197431-42197635)
chr3 (105-308)||(17056062-17056264)
chr3 (105-305)||(46656367-46656561)
chr3 (105-308)||(55003678-55003874)
chr3 (166-307)||(48128310-48128451)
chr3 (105-215)||(23138779-23138889)
chr3 (105-214)||(11846340-11846450)
chr3 (185-307)||(53069319-53069443)
chr3 (105-191)||(53071638-53071724)
chr3 (181-301)||(13367114-13367233)
chr3 (123-308)||(2982494-2982680)
chr3 (181-301)||(9760481-9760600)
chr3 (201-308)||(13444840-13444948)
chr3 (128-300)||(12108943-12109117)
chr3 (105-183)||(24643885-24643963)
chr3 (105-177)||(34300125-34300197)
chr3 (105-228)||(17601883-17602006)
chr3 (45-105)||(48033057-48033117)
chr3 (45-104)||(52401017-52401076)
chr3 (105-161)||(8474551-8474607)
chr3 (45-101)||(22508738-22508794)
chr3 (52-104)||(46026076-46026128)
chr3 (45-104)||(46027417-46027476)
chr3 (45-104)||(52403124-52403183)
chr3 (45-103)||(20489358-20489416)
chr3 (53-103)||(40476222-40476272)
chr3 (54-104)||(44507808-44507858)
chr3 (45-102)||(39819314-39819371)
chr3 (52-101)||(52707539-52707588)
chr3 (45-105)||(977846-977906)
chr3 (52-104)||(38505586-38505638)
chr3 (52-104)||(54437474-54437526)
chr3 (49-104)||(35639507-35639562)
chr3 (53-104)||(42446526-42446577)
chr3 (45-108)||(43641139-43641202)
chr3 (45-104)||(53121302-53121361)
chr3 (278-308)||(13837534-13837564)
chr3 (109-170)||(27103272-27103334)
chr3 (45-106)||(4705679-4705740)
chr3 (234-279)||(17593487-17593532)
chr3 (45-102)||(20488368-20488425)
chr3 (230-293)||(24643817-24643877)
[»] chr2 (32 HSPs)
chr2 (105-308)||(28683214-28683417)
chr2 (105-308)||(31002063-31002267)
chr2 (105-308)||(30965014-30965218)
chr2 (105-308)||(31008041-31008245)
chr2 (105-297)||(13149969-13150162)
chr2 (105-308)||(44717074-44717278)
chr2 (105-277)||(35439671-35439843)
chr2 (122-308)||(11048820-11049010)
chr2 (105-308)||(13455786-13455990)
chr2 (105-308)||(13461727-13461931)
chr2 (105-308)||(35084948-35085152)
chr2 (105-308)||(35090921-35091125)
chr2 (105-308)||(19879281-19879489)
chr2 (105-308)||(36750101-36750305)
chr2 (105-223)||(35442187-35442305)
chr2 (105-256)||(7771509-7771659)
chr2 (155-308)||(23343290-23343444)
chr2 (105-242)||(29832892-29833035)
chr2 (103-308)||(31651316-31651515)
chr2 (155-256)||(23284680-23284783)
chr2 (268-308)||(35438974-35439014)
chr2 (45-104)||(1777469-1777528)
chr2 (45-104)||(23861752-23861811)
chr2 (177-256)||(28765341-28765420)
chr2 (45-102)||(21573938-21573995)
chr2 (56-104)||(3924877-3924925)
chr2 (45-104)||(2412428-2412487)
chr2 (45-104)||(25977870-25977929)
chr2 (45-104)||(25979251-25979310)
chr2 (54-103)||(25282408-25282457)
chr2 (73-106)||(30844576-30844609)
chr2 (45-105)||(1778790-1778850)
[»] chr5 (23 HSPs)
chr5 (105-306)||(28525657-28525858)
chr5 (105-306)||(28531753-28531954)
chr5 (105-307)||(41296966-41297169)
chr5 (105-308)||(7389816-7390020)
chr5 (105-308)||(20499825-20500029)
chr5 (105-308)||(12686448-12686651)
chr5 (105-308)||(12692550-12692753)
chr5 (105-307)||(30384656-30384856)
chr5 (105-308)||(19060040-19060246)
chr5 (105-308)||(30771967-30772172)
chr5 (105-308)||(32094490-32094694)
chr5 (144-308)||(32097291-32097458)
chr5 (165-309)||(14609917-14610060)
chr5 (105-308)||(19066381-19066580)
chr5 (165-308)||(26318529-26318675)
chr5 (177-296)||(33753516-33753634)
chr5 (105-215)||(8706749-8706859)
chr5 (122-307)||(26509557-26509737)
chr5 (105-175)||(14609818-14609888)
chr5 (45-105)||(6894010-6894070)
chr5 (45-104)||(3936578-3936637)
chr5 (45-104)||(3954052-3954111)
chr5 (45-103)||(35605572-35605630)
[»] chr8 (29 HSPs)
chr8 (105-308)||(22219996-22220200)
chr8 (105-308)||(5542429-5542634)
chr8 (105-308)||(10699716-10699920)
chr8 (105-308)||(42033484-42033691)
chr8 (105-308)||(10705525-10705728)
chr8 (105-308)||(32890575-32890779)
chr8 (105-308)||(32896699-32896903)
chr8 (105-308)||(36818659-36818862)
chr8 (105-308)||(39735817-39736011)
chr8 (105-308)||(42993272-42993472)
chr8 (105-308)||(14417648-14417831)
chr8 (105-219)||(39727643-39727757)
chr8 (105-308)||(9934970-9935169)
chr8 (109-309)||(17954201-17954394)
chr8 (155-235)||(1883185-1883267)
chr8 (52-104)||(14197825-14197877)
chr8 (249-308)||(1883088-1883147)
chr8 (52-103)||(39440429-39440480)
chr8 (241-308)||(39727577-39727645)
chr8 (45-104)||(6783578-6783637)
chr8 (273-307)||(1171215-1171249)
chr8 (52-102)||(3483635-3483685)
chr8 (52-106)||(28998000-28998054)
chr8 (45-103)||(41354472-41354530)
chr8 (52-104)||(1420449-1420501)
chr8 (45-104)||(39439924-39439983)
chr8 (132-170)||(11641418-11641456)
chr8 (52-102)||(38455449-38455499)
chr8 (72-104)||(9832215-9832247)
[»] chr6 (27 HSPs)
chr6 (105-308)||(8651072-8651276)
chr6 (105-308)||(31756489-31756691)
chr6 (105-308)||(21191138-21191343)
chr6 (105-308)||(21197299-21197514)
chr6 (105-308)||(21783593-21783798)
chr6 (109-308)||(30905851-30906049)
chr6 (105-308)||(21770836-21771037)
chr6 (127-308)||(21789816-21789999)
chr6 (105-308)||(4580590-4580794)
chr6 (105-308)||(25353900-25354102)
chr6 (105-308)||(25343314-25343515)
chr6 (166-308)||(17581384-17581523)
chr6 (105-308)||(1106000-1106203)
chr6 (181-301)||(28728047-28728166)
chr6 (105-174)||(6096997-6097067)
chr6 (107-230)||(12801887-12802009)
chr6 (105-170)||(17581291-17581356)
chr6 (45-104)||(17517309-17517368)
chr6 (45-102)||(25440673-25440730)
chr6 (52-104)||(29291359-29291411)
chr6 (123-161)||(1283280-1283318)
chr6 (52-105)||(1974159-1974212)
chr6 (45-101)||(3279499-3279555)
chr6 (199-230)||(12801643-12801674)
chr6 (52-102)||(17516164-17516214)
chr6 (52-104)||(3276367-3276419)
chr6 (45-109)||(20897497-20897561)
[»] chr4 (30 HSPs)
chr4 (105-308)||(26957072-26957276)
chr4 (105-308)||(48166865-48167069)
chr4 (105-308)||(48160646-48160850)
chr4 (105-308)||(26971824-26972027)
chr4 (105-305)||(10733624-10733822)
chr4 (105-305)||(10947393-10947591)
chr4 (105-308)||(6257474-6257677)
chr4 (105-305)||(10739611-10739809)
chr4 (105-305)||(10953380-10953578)
chr4 (109-308)||(50168286-50168485)
chr4 (105-308)||(44831888-44832087)
chr4 (105-308)||(24287674-24287877)
chr4 (114-308)||(50155657-50155849)
chr4 (105-272)||(35177481-35177650)
chr4 (182-308)||(33458536-33458662)
chr4 (182-308)||(33461661-33461787)
chr4 (105-307)||(17627050-17627247)
chr4 (105-308)||(49976288-49976477)
chr4 (105-305)||(19686593-19686790)
chr4 (230-308)||(4632193-4632272)
chr4 (122-226)||(28704237-28704340)
chr4 (45-106)||(42359346-42359407)
chr4 (45-104)||(19674414-19674473)
chr4 (45-104)||(29060882-29060941)
chr4 (105-244)||(4632062-4632189)
chr4 (45-106)||(22204053-22204114)
chr4 (65-104)||(5259171-5259210)
chr4 (165-215)||(9237129-9237179)
chr4 (52-105)||(32699321-32699374)
chr4 (52-104)||(3880503-3880555)
[»] chr1 (37 HSPs)
chr1 (105-308)||(31051231-31051435)
chr1 (105-308)||(34739673-34739876)
chr1 (105-308)||(31057731-31057935)
chr1 (105-308)||(8093115-8093318)
chr1 (105-308)||(44409687-44409891)
chr1 (105-308)||(50305884-50306087)
chr1 (105-308)||(25387773-25387975)
chr1 (105-308)||(25381804-25382008)
chr1 (105-308)||(1077931-1078135)
chr1 (105-308)||(38152233-38152430)
chr1 (105-308)||(27954848-27955050)
chr1 (140-308)||(24927030-24927197)
chr1 (122-230)||(12183959-12184069)
chr1 (105-308)||(24963978-24964177)
chr1 (105-295)||(33458192-33458382)
chr1 (46-104)||(50164403-50164461)
chr1 (45-105)||(39162822-39162883)
chr1 (105-195)||(25275429-25275519)
chr1 (52-94)||(28198440-28198482)
chr1 (45-110)||(37396840-37396905)
chr1 (45-110)||(46075050-46075115)
chr1 (52-104)||(24609919-24609971)
chr1 (45-104)||(24611117-24611176)
chr1 (45-104)||(27262908-27262967)
chr1 (45-104)||(35911888-35911947)
chr1 (45-101)||(9774040-9774096)
chr1 (45-109)||(24427369-24427433)
chr1 (45-104)||(20723688-20723747)
chr1 (45-104)||(26863860-26863919)
chr1 (45-104)||(39163024-39163083)
chr1 (64-105)||(23469988-23470029)
chr1 (55-104)||(45979506-45979555)
chr1 (63-104)||(48594066-48594107)
chr1 (63-104)||(48598677-48598718)
chr1 (45-109)||(20722467-20722531)
chr1 (184-224)||(27396029-27396069)
chr1 (52-104)||(48588968-48589020)
[»] scaffold0012 (1 HSPs)
scaffold0012 (105-308)||(173159-173362)
[»] scaffold0440 (1 HSPs)
scaffold0440 (105-308)||(1463-1660)
[»] scaffold0208 (2 HSPs)
scaffold0208 (105-308)||(6209-6413)
scaffold0208 (105-308)||(12082-12286)
[»] scaffold1114 (1 HSPs)
scaffold1114 (105-304)||(750-949)
[»] scaffold0064 (1 HSPs)
scaffold0064 (105-262)||(13960-14117)
[»] scaffold0363 (1 HSPs)
scaffold0363 (105-308)||(888-1071)
[»] scaffold0185 (1 HSPs)
scaffold0185 (105-271)||(5654-5821)
[»] scaffold0085 (1 HSPs)
scaffold0085 (144-308)||(38152-38317)
[»] scaffold0095 (1 HSPs)
scaffold0095 (52-103)||(42762-42813)
[»] scaffold0517 (1 HSPs)
scaffold0517 (45-110)||(10309-10374)
[»] scaffold0516 (1 HSPs)
scaffold0516 (52-106)||(1142-1196)
[»] scaffold0002 (2 HSPs)
scaffold0002 (45-96)||(344945-344996)
scaffold0002 (52-104)||(345904-345956)


Alignment Details
Target: chr7 (Bit Score: 184; Significance: 1e-99; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 3811641 - 3811438
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  3811641 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagttgatatggactcaatgagtggatgtccggatggcccattaa 3811542  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3811541 cggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccccaatataccgtacacggcaaactctctcttctccccatctgaagaga 3811442  T
Q  305 actt 308  Q
    ||||    
T  3811441 actt 3811438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 3817783 - 3817580
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  3817783 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagttgatatggactcaatgagtggatgtccggatggcccattaa 3817684  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3817683 cggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccccaatataccgtacacggcaaactctctcttctccccatctgaagaga 3817584  T
Q  305 actt 308  Q
    ||||    
T  3817583 actt 3817580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 351474 - 351677
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||     
T  351474 aattaagtaataaggctattagatttctaattggataaataattaaatatttaattagttgatatggactcaatgagtggatgtccggatggcccattac 351573  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
     ||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  351574 tggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatataccgtacacgacaaactctctcttctccccatctgaagaga 351673  T
Q  305 actt 308  Q
    ||||    
T  351674 actt 351677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 5849217 - 5849420
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||  ||||||    
T  5849217 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagttgatatggactcaatgagtggatgttcggatggtccattaa 5849316  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  5849317 cggaataatgagaaaccttaatggtcatccaatataaaagaggctatggtcctcaatataccgtacacggcaaactctcttttctccccatctgaagata 5849416  T
Q  305 actt 308  Q
    ||||    
T  5849417 actt 5849420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 105 - 305
Target Start/End: Complemental strand, 35148481 - 35148281
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  35148481 aattaagtaataaggctattggatttctaattggataattaattaaatatttaattagttgatatggactcaatgagtggatgtccggatggctcattaa 35148382  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    | |||||||||||||| ||||||| |||||||||||||||||| |||| ||| ||||| |||||||| ||||||||||||||||||||||||||||||||    
T  35148381 cagaataatgggaaactctaatggccatccaatataaaagaggctatgatccccaatacaccgtacatggcaaactctctcttctccccatctgaagaga 35148282  T
Q  305 a 305  Q
    |    
T  35148281 a 35148281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 339068 - 339270
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||     
T  339068 aattaagtaataaggctattagatttctaattggataaataattaaatatttaattagttgatatggactcaatgagtggatgtccggatggcccattac 339167  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
     |||||||||||||| |||||||| ||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  339168 tggaataatgggaaa-cctaatggccatccaatataaaagaggtcatggtccccaatataccgtacacgacaaactctctcttctccccatctgaagaga 339266  T
Q  305 actt 308  Q
    ||||    
T  339267 actt 339270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 26383356 - 26383559
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||| | ||||||    
T  26383356 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattaatgaatatggactcaatgagtggatgtccggatgacccattaa 26383455  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
     |||||||||||||||||||||||||||||||||||||||||| ||||||||  |||| |||| |||||||||||||||||||||||| || ||||||||    
T  26383456 tggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccctaatacaccggacacggcaaactctctcttctccctatttgaagaga 26383555  T
Q  305 actt 308  Q
    ||||    
T  26383556 actt 26383559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 22742402 - 22742198
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||||||||| ||||||| ||||||    
T  22742402 aattaagtaataaggctattagatttctaattagataattaattaaatatataagtagttgatatggactcaatgagtggatgtccggatggcccattaa 22742303  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggc-aaactctctcttctccccatctgaagag 303  Q
    |||||||||||||||||||||||| |||||||||||||||||  |||||||  |||||||||||||| ||| ||||||||||||||||| ||||||||||    
T  22742302 cggaataatgggaaaccctaatggccatccaatataaaagagactatggtctccaatataccgtacatggcaaaactctctcttctcccaatctgaagag 22742203  T
Q  304 aactt 308  Q
    |||||    
T  22742202 aactt 22742198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 28421431 - 28421228
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| |||||||||||||  |||||||||||| ||||||| ||    
T  28421431 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatggactcaacatgagtggatgtccggatggccca 28421336  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaa 300  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  28421335 ttaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatacaccgtacacggcaaactctctcttctccccatctgaa 28421236  T
Q  301 gagaactt 308  Q
    ||||||||    
T  28421235 gagaactt 28421228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 105 - 256
Target Start/End: Complemental strand, 35153001 - 35152850
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| | ||||||    
T  35153001 aattaagtaataaggctattcgatttctaattggataattaattaaatatttaattagttgatatggactcaatgagtggatgtccggatgacccattaa 35152902  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcc 256  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  35152901 cggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtcc 35152850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 150 - 309
Target Start/End: Original strand, 43539709 - 43539871
Alignment:
Q  150 aatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaacggaataatgggaaaccctaatggtcatccaatataaaagaggtt 249  Q
    |||||||||||| | ||||||||||||||||||||||||||||||| | |||||||||||||| || ||||||||||||||| |||||||||||||||||    
T  43539709 aatatttaattaattgatatggactcaatgagtggatgtctggatgacccattaacggaataacggaaaaccctaatggtcacccaatataaaagaggtt 43539808  T
Q  250 atggtcctcaatataccgtacacggcaaactctctcttctc---cccatctgaagagaacttt 309  Q
    ||||||| ||||||||||| |||||||||||||||||||||   |||||||||||||||||||    
T  43539809 atggtccccaatataccgtgcacggcaaactctctcttctccttcccatctgaagagaacttt 43539871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 119 - 277
Target Start/End: Complemental strand, 42767661 - 42767505
Alignment:
Q  119 gctattagatttctaattggataattaattaaatatttaattagtggatatggac-tcaatgagtggatgtctggatggctcattaacggaataatggga 217  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||   ||||||||||||||| |||    
T  42767661 gctattagatttttaattggataattaattaaatatttaattagttgatatggacttcaatgagtggatgtctggatgatccattaacggaataatagga 42767562  T
Q  218 aaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa 277  Q
    ||||||||||| |||   |||||||||||| ||||||||  |||||||||||||||||||    
T  42767561 aaccctaatggccat---atataaaagaggctatggtcccgaatataccgtacacggcaa 42767505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 5979648 - 5979443
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| |||||||||||||  ||  |||||||  |||||||  |    
T  5979648 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatggactcaacatggatggatgttcggatggccaa 5979553  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaata-taaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctg 298  Q
    ||||| |||||||||||||  ||||||||||||||||| |||||||||||||||||| ||||| |||||||||| ||| |||||||||||||||||||||    
T  5979552 ttaacagaataatgggaaagtctaatggtcatccaataataaaagaggttatggtccccaatacaccgtacacgacaatactctctcttctccccatctg 5979453  T
Q  299 aagagaactt 308  Q
    ||||||||||    
T  5979452 aagagaactt 5979443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 15843730 - 15843837
Alignment:
Q  202 taacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatatacc-gtacacggcaaactctctcttctccccatctgaa 300  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||| ||| |||||||||||||||||| |||||||||||||||    
T  15843730 taacggaataatgggaaactctaatggtcatccaatataaaagaggttatggtctccaatacaccggtacacggcaaactctctattctccccatctgaa 15843829  T
Q  301 gagaactt 308  Q
    ||||||||    
T  15843830 gagaactt 15843837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 15860839 - 15860946
Alignment:
Q  202 taacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatatacc-gtacacggcaaactctctcttctccccatctgaa 300  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||| ||| |||||||||||||||||| |||||||||||||||    
T  15860839 taacggaataatgggaaactctaatggtcatccaatataaaagaggttatggtctccaatacaccggtacacggcaaactctctattctccccatctgaa 15860938  T
Q  301 gagaactt 308  Q
    ||||||||    
T  15860939 gagaactt 15860946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 230 - 308
Target Start/End: Original strand, 20238762 - 20238841
Alignment:
Q  230 catccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaagagaactt 308  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20238762 catccaatataaaagaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctgaagagaactt 20238841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 138 - 267
Target Start/End: Original strand, 7608146 - 7608276
Alignment:
Q  138 gataattaattaaatattt-aattagtggatatggactcaatgagtggatgtctggatggctcattaacggaataatgggaaaccctaatggtcatccaa 236  Q
    ||||||||||||||||||| ||||||| |||||||  | |||||||||||||| ||||| | |||||| | |||||||  |||||||||||  |||||||    
T  7608146 gataattaattaaatattttaattagttgatatggggttaatgagtggatgtccggatgacccattaatgaaataatgaaaaaccctaatgaccatccaa 7608245  T
Q  237 tataaaagaggttatggtcctcaatataccg 267  Q
    ||||||||| |||||||||| ||||| ||||    
T  7608246 tataaaagatgttatggtccccaatacaccg 7608276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 18666958 - 18666881
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggata---attaattaaatatttaattagtggatatggactcaatg 179  Q
    ||||||||||||||||||||||||||||||||| |||   ||||||||||| |||||||||| |||||||||||||||    
T  18666958 aattaagtaataaggctattagatttctaattgtatagttattaattaaatttttaattagttgatatggactcaatg 18666881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 105 - 309
Target Start/End: Original strand, 26380795 - 26380975
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||| |||||||||||||||||||||||||||||||||||||                |||||| |||||||||||| ||||| ||||| | |||       
T  26380795 aattaaataataaggctattagatttctaattggataattaatt----------------gatatgaactcaatgagtgcatgtccggatgacccat--- 26380875  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
        ||||||||||| | ||||||||||||||||||||||| | |||||||| || || | |  ||||| |||||||||||||||||| ||||||||| |    
T  26380876 ----ataatgggaaatcttaatggtcatccaatataaaaga-gctatggtccccagtacatcagacacgacaaactctctcttctcccgatctgaagaaa 26380970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 308
Target Start/End: Complemental strand, 35150865 - 35150810
Alignment:
Q  253 gtcctcaatataccgtacacggcaaactctctcttctccccatctgaagagaactt 308  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  35150865 gtccccaatacaccgtacatggcaaactctctcttctccccatctgaagagaactt 35150810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 307
Target Start/End: Complemental strand, 18657120 - 18656923
Alignment:
Q  106 attaagtaataaggcta-ttagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||| |||||||| || |||||||||||||||  ||   ||||| |  |||||||||| ||||||||||||||||||| | ||||||    
T  18657120 attaagtaataaggctaattagatttttatttggataattaattattta---aattaattaatatggactctatgagtggatgtctggatgacccattaa 18657024  T
Q  205 cggaataatgggaaaccctaatggtcatc-caatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagag 303  Q
       |||||||| ||| |||||||| |||| || | |  |||||| ||| |||  ||||  ||| |||||| |||||| ||||||||| || |||||||||    
T  18657023 tacaataatggtaaatcctaatgg-catcacactgt--aagaggctattgtctccaatgcaccatacacgacaaactttctcttctctccgtctgaagag 18656927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 25046240 - 25046299
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||| ||||||||||  |||||||||||||||||||||||||||| |||| |||||||    
T  25046240 ttaccatggaccaaaatctaaactcgccatatttgcaaggaccaaaatcatattttagcc 25046299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 11217071 - 11217127
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataattta 101  Q
    |||||| |||||||||||||||||||| ||||||||| ||||||||| |||| ||||    
T  11217071 ttaccagggaccaaaattcaaactcgctatatttgcagggaccaaaagcatatttta 11217127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 36749254 - 36749306
Alignment:
Q  52 ggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    ||||||||| ||||||||| ||||||||||| ||||||||||||| |||||||    
T  36749254 ggaccaaaactcaaactcgtcatatttgcaatgaccaaaaacatattttagcc 36749306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 12933478 - 12933419
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||| |||||||||||||||||| | ||||||||| ||||||||| |||| |||||||    
T  12933478 ttaccagggaccaaaattcaaactcactatatttgcagggaccaaaagcatattttagcc 12933419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 154
Target Start/End: Original strand, 24689729 - 24689772
Alignment:
Q  111 gtaataaggctattagatttctaattggataattaattaaatat 154  Q
    |||||||||||||||||||| ||||| |||||||||||||||||    
T  24689729 gtaataaggctattagatttttaatttgataattaattaaatat 24689772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 35212127 - 35212068
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||| |||||||||  |||||||| |||||||||| |||||||||||||| |||||||    
T  35212127 ttaccagggaccaaaacccaaactcgtcatatttgcagggaccaaaaacatattttagcc 35212068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 42255017 - 42254958
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||| ||||||||| ||||||||||||||||| || ||||||||| |||| |||||||    
T  42255017 ttaccagggaccaaaactcaaactcgccatatttacagggaccaaaagcatattttagcc 42254958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 262
Target Start/End: Original strand, 15843687 - 15843724
Alignment:
Q  225 atggtcatccaatataaaagaggttatggtcctcaata 262  Q
    |||||||||||||||||||||||||||||||| |||||    
T  15843687 atggtcatccaatataaaagaggttatggtccccaata 15843724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 262
Target Start/End: Original strand, 15860796 - 15860833
Alignment:
Q  225 atggtcatccaatataaaagaggttatggtcctcaata 262  Q
    |||||||||||||||||||||||||||||||| |||||    
T  15860796 atggtcatccaatataaaagaggttatggtccccaata 15860833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 30513286 - 30513339
Alignment:
Q  51 aggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    ||||||||||| |||||||  |||||||||||||||||||| |||| |||||||    
T  30513286 aggaccaaaatccaaactcatcatatttgcaaggaccaaaatcatattttagcc 30513339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 8824546 - 8824608
Alignment:
Q  166 atatggactcaat--gagtggatgtctggatggctcattaacggaataatgggaaaccctaatg 227  Q
    |||||||||||||  ||||||||||||||||| |||| ||||||||||||| |||||| |||||    
T  8824546 atatggactcaatatgagtggatgtctggatgactca-taacggaataatgagaaaccttaatg 8824608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 16914092 - 16914037
Alignment:
Q  122 attagatttctaattggataattaattaaatatttaattagtggatatggactcaa 177  Q
    |||| ||||||||||| ||||||||||| ||||||||||| | |||||| ||||||    
T  16914092 attaaatttctaattgaataattaattatatatttaattaattgatatgaactcaa 16914037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 24195666 - 24195607
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||| ||| |||||  ||||||||| ||||||||| |||||||||||||| |||||||    
T  24195666 ttaccagggagcaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 24195607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 96
Target Start/End: Complemental strand, 25037809 - 25037758
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacata 96  Q
    |||||| ||||||||||||||||||| |||||||||| |||| |||| ||||    
T  25037809 ttaccagggaccaaaattcaaactcgtcatatttgcagggactaaaatcata 25037758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 103
Target Start/End: Complemental strand, 31853600 - 31853549
Alignment:
Q  52 ggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagc 103  Q
    |||||||||| ||||||| | ||||||||| |||||||||||||| ||||||    
T  31853600 ggaccaaaatccaaactcacaatatttgcagggaccaaaaacatattttagc 31853549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 32197909 - 32197968
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    ||||||||||||||||  |||| |||| ||||||||| ||||||||| |||| |||||||    
T  32197909 ttaccaaggaccaaaacccaaattcgctatatttgcagggaccaaaagcatattttagcc 32197968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 41693704 - 41693645
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||| |||||||||  |||| |||||||||||||| ||| |||||||||| |||||||    
T  41693704 ttaccagggaccaaaacccaaattcgccatatttgcagggatcaaaaacatattttagcc 41693645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 31489935 - 31489993
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagc 103  Q
    |||| |||||||||||  ||||||||  ||||||||| |||||||||||||| ||||||    
T  31489935 ttactaaggaccaaaacccaaactcgttatatttgcagggaccaaaaacatattttagc 31489993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 39619800 - 39619850
Alignment:
Q  54 accaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||||  ||||||||||||||||||| ||||||||| |||| |||||||    
T  39619800 accaaaacccaaactcgccatatttgcatggaccaaaagcatattttagcc 39619850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 32544774 - 32544830
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataattta 101  Q
    ||||||||||||||||  |||| |||| ||||||||| ||||||||| |||| ||||    
T  32544774 ttaccaaggaccaaaacccaaattcgctatatttgcagggaccaaaatcatatttta 32544830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 40578230 - 40578286
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataattta 101  Q
    |||||| ||| ||||||||||| |||||||||||  | |||||||||||||| ||||    
T  40578230 ttaccagggatcaaaattcaaattcgccatatttatagggaccaaaaacatatttta 40578286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 173; Significance: 5e-93; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 10769442 - 10769238
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  10769442 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagttgatatggactcaatgagtggatgtccggatggcccattaa 10769343  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaagag 303  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  10769342 cggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctgaagag 10769243  T
Q  304 aactt 308  Q
    |||||    
T  10769242 aactt 10769238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 105 - 306
Target Start/End: Original strand, 49151299 - 49151500
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  49151299 aattaagtaataaggctgttagatttctaattggataattaattaaatatttaattagttgatatggactcaatgagtggatgtccggatggcccattaa 49151398  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  49151399 cggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatataccgtacatggcaaactctctcttctccccatctgaagaga 49151498  T
Q  305 ac 306  Q
    ||    
T  49151499 ac 49151500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 105 - 306
Target Start/End: Original strand, 49157366 - 49157567
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  49157366 aattaagtaataaggctgttagatttctaattggataattaattaaatatttaattagttgatatggactcaatgagtggatgtccggatggcccattaa 49157465  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  49157466 cggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatataccgtacatggcaaactctctcttctccccatctgaagaga 49157565  T
Q  305 ac 306  Q
    ||    
T  49157566 ac 49157567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 38449536 - 38449332
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||| | ||||||    
T  38449536 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagttgatatggacttaatgagtggatgtccggatgacccattaa 38449437  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaagag 303  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  38449436 cggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctgaagag 38449337  T
Q  304 aactt 308  Q
    |||||    
T  38449336 aactt 38449332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 38456023 - 38455819
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||| | ||||||    
T  38456023 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagttgatatggacttaatgagtggatgtccggatgacccattaa 38455924  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaagag 303  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  38455923 cggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctgaagag 38455824  T
Q  304 aactt 308  Q
    |||||    
T  38455823 aactt 38455819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 10761123 - 10760919
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  10761123 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagttgatatggactcaatgagtggatgtccggatggcccattaa 10761024  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaagag 303  Q
    |||||||||||||||||||||||  |||||||||||||||||| |||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||    
T  10761023 cggaataatgggaaaccctaatgaccatccaatataaaagaggctatggtccccaatataccgtacacgacaatactctctcttctccccatctgaagag 10760924  T
Q  304 aactt 308  Q
    |||||    
T  10760923 aactt 10760919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 105 - 307
Target Start/End: Original strand, 28964567 - 28964769
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||  ||||||    
T  28964567 aattaagtaataaagttattagatttctaattggataattaattaaatatttaattagttgatatggactcaatgagtggatgtccggatggtccattaa 28964666  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  28964667 cggaataatgagaaaccctaatggtcatccaatataaaagaggctatggtccccaatataccgtacacggaaaactctctcttctccccatctgaagaga 28964766  T
Q  305 act 307  Q
    |||    
T  28964767 act 28964769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 8331474 - 8331677
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||| ||||| | ||||||    
T  8331474 aattaagtaataaggatataagatttctaattggataattaattaaatatttaatcagttgatatggacttaatgagtggatgtccggatgacccattaa 8331573  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || ||||||||||||||||||||||||||||||||||||||    
T  8331574 cggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccccaatacactgtacacggcaaactctctcttctccccatctgaagaga 8331673  T
Q  305 actt 308  Q
    ||||    
T  8331674 actt 8331677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 30051573 - 30051371
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||| ||||||| ||||||    
T  30051573 aattaagtaataaagatattagatttctaattggataattaattaaatatttaattagttgatatggacttaacgagtggatgtccggatggcccattaa 30051474  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    ||||||||| |||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  30051473 cggaataat-ggaaaccctaatggccatccaatataaaagaggctatggtccccaatataccgtacacggcaaactctctcttctgcccatctgaagaga 30051375  T
Q  305 actt 308  Q
    ||||    
T  30051374 actt 30051371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 10238685 - 10238481
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| |||||||||||||  |||||||||||| ||||||| ||    
T  10238685 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatggactcaacatgagtggatgtccggatggccca 10238590  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctga 299  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||    
T  10238589 ttaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatacaccgtacacggcaatactctctcttctccccatctga 10238490  T
Q  300 agagaactt 308  Q
    |||||||||    
T  10238489 agagaactt 10238481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 10244807 - 10244603
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| |||||||||||||  |||||||||||| ||||||| ||    
T  10244807 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatggactcaacatgagtggatgtccggatggccca 10244712  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctga 299  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||    
T  10244711 ttaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatacaccgtacacggcaatactctctcttctccccatctga 10244612  T
Q  300 agagaactt 308  Q
    |||||||||    
T  10244611 agagaactt 10244603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 11840198 - 11839994
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| |||||||||||||  |||||||||||| ||||||| ||    
T  11840198 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatggactcaacatgagtggatgtccggatggccca 11840103  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctga 299  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||    
T  11840102 ttaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatacaccgtacacggcaatactctctcttctccccatctga 11840003  T
Q  300 agagaactt 308  Q
    |||||||||    
T  11840002 agagaactt 11839994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 26429890 - 26429686
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| ||||||| |||||  |||||||||||| ||||||| ||    
T  26429890 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatgggctcaacatgagtggatgtccggatggccca 26429795  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctga 299  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  26429794 ttaacggaataatgggaaaccctaatggtcatccagtataaaagaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctga 26429695  T
Q  300 agagaactt 308  Q
    |||||||||    
T  26429694 agagaactt 26429686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 42191693 - 42191489
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| |||||||||||||  |||||||||||| ||||||| ||    
T  42191693 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatggactcaacatgagtggatgtccggatggccca 42191598  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctga 299  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||    
T  42191597 ttaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatacaccgtacacggcaatactctctcttctccccatctga 42191498  T
Q  300 agagaactt 308  Q
    |||||||||    
T  42191497 agagaactt 42191489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 42197635 - 42197431
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| |||||||||||||  |||||||||||| ||||||| ||    
T  42197635 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatggactcaacatgagtggatgtccggatggccca 42197540  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctga 299  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||    
T  42197539 ttaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatacaccgtacacggcaatactctctcttctccccatctga 42197440  T
Q  300 agagaactt 308  Q
    |||||||||    
T  42197439 agagaactt 42197431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 17056264 - 17056062
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| |||||||||||||  |||||||||||| ||||| || |    
T  17056264 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatggactcaacatgagtggatgtccggatgcct-a 17056170  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaa 300  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||| | |||||||||||||||||||||||||||||||||||    
T  17056169 ttaacggaataatgggaaaccctaatggacatccaatataaaagaggctatggtccccaatacatcgtacacggcaaactctctcttctccccatctgaa 17056070  T
Q  301 gagaactt 308  Q
    ||||||||    
T  17056069 gagaactt 17056062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 105 - 305
Target Start/End: Original strand, 46656367 - 46656561
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||| ||||| |  |||||    
T  46656367 aattaagtaataaagctattagatttctaattggataattaattaaatatttaattagttgatatgtactcgatgagtggatgtccggatgacctattaa 46656466  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| | ||||| ||||||      ||||  ||||||||||||||||||| |||    
T  46656467 cggaataatgggaaaccctattggttatccaatataaaagaggttatggttcccaatacaccgta------aaacattctcttctccccatctgaataga 46656560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 55003874 - 55003678
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| |||||||||||||  |||||||||||| ||||| | ||    
T  55003874 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatggactcaacatgagtggatgtccggatgaccca 55003779  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaa 300  Q
    ||||||||||||||||||||       ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  55003778 ttaacggaataatgggaaac-------gtcatccaatataaaagaggttatggtccccaatataccgtacacgacaaactctctcttctccccatctgaa 55003686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 166 - 307
Target Start/End: Complemental strand, 48128451 - 48128310
Alignment:
Q  166 atatggactcaatgagtggatgtctggatggctcattaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatatac 265  Q
    |||||||||||||||||||||||| ||||| | ||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||| ||||||||    
T  48128451 atatggactcaatgagtggatgtccggatgacccattaacggaataatggaaaaccttaatggtcatccaatataaaagaggctatggtccccaatatac 48128352  T
Q  266 cgtacacggcaaactctctcttctccccatctgaagagaact 307  Q
    ||||||||||||||  |||||||||||  |||||||||||||    
T  48128351 cgtacacggcaaacattctcttctccctgtctgaagagaact 48128310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 105 - 215
Target Start/End: Complemental strand, 23138889 - 23138779
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||| | ||||||    
T  23138889 aattaagtaataagactattagatttctaattggataattaattaaatatttaattagttgatatggacttaatgagtggatgtccggatgacccattaa 23138790  T
Q  205 cggaataatgg 215  Q
    |||||||||||    
T  23138789 cggaataatgg 23138779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 105 - 214
Target Start/End: Complemental strand, 11846450 - 11846340
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcatta 203  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||| ||||||| |||||    
T  11846450 aattaagtaataaggctaattagatttctaattggataattaattaaatatttaattagttgatattgagtcaatgagtggatgtccggatggcccatta 11846351  T
Q  204 acggaataatg 214  Q
    |||||||||||    
T  11846350 acggaataatg 11846340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 185 - 307
Target Start/End: Complemental strand, 53069443 - 53069319
Alignment:
Q  185 atgtctggatggctcattaacggaataatgggaaaccctaatggtcatccaatataaaa--gaggttatggtcctcaatataccgtacacggcaaactct 282  Q
    ||||| ||||| | ||||||| ||||||||||||||||||||| || ||||||||||||  |||| |||||||||||||| |||||||| ||||||||||    
T  53069443 atgtccggatgacccattaacagaataatgggaaaccctaatgatcgtccaatataaaaaagaggctatggtcctcaatacaccgtacatggcaaactct 53069344  T
Q  283 ctcttctccccatctgaagagaact 307  Q
    |||||||||||||||||||||||||    
T  53069343 ctcttctccccatctgaagagaact 53069319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 105 - 191
Target Start/End: Complemental strand, 53071724 - 53071638
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctg 191  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||    
T  53071724 aattaagtaataaggctattagatttctaattggataattaattgaatatttaattagttgatatgaactcaatgagtggatgtctg 53071638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 181 - 301
Target Start/End: Complemental strand, 13367233 - 13367114
Alignment:
Q  181 gtggatgtctggatggctcattaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaact 280  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||  |||||||||| ||||||| |||||||| ||||||||||||||  |||||      
T  13367233 gtggatgtctggatggtccattaacggaataatgggaaaccctaatgaccatccaatat-aaagaggctatggtccccaatataccgtacatagcaaaac 13367135  T
Q  281 ctctcttctccccatctgaag 301  Q
    | |||||||||||||||||||    
T  13367134 cgctcttctccccatctgaag 13367114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 123 - 308
Target Start/End: Complemental strand, 2982680 - 2982494
Alignment:
Q  123 ttagatttctaattggataattaattaaatatttaattagtggatatggactcaat--gagtggatgtctggatggctcattaacggaataatgggaaac 220  Q
    ||||||||||||||| | ||||||||||||||||||||||| |||||  |||||||  ||||  ||||| ||||| | ||||||  ||||||||  |||     
T  2982680 ttagatttctaattgaaaaattaattaaatatttaattagttgatataaactcaatacgagtatatgtcaggatgacccattaaaagaataatga-aaat 2982582  T
Q  221 cctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagagaactt 308  Q
    |||||||  || | |||||||||||||| |||||||  |||||||| || ||||| |||||||| ||||||| |||||||||||||||    
T  2982581 cctaatgaccaacaaatataaaagaggtcatggtcccaaatataccatatacggcgaactctcttttctccctatctgaagagaactt 2982494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 181 - 301
Target Start/End: Original strand, 9760481 - 9760600
Alignment:
Q  181 gtggatgtctggatggctcattaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaact 280  Q
    ||||||||||||||||  |||||| |||||||| ||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||  | |||      
T  9760481 gtggatgtctggatggtccattaaaggaataataggaaaccctaatggtcatccaatat-aaagaggatatggtccccaatataccgtacatagtaaaac 9760579  T
Q  281 ctctcttctccccatctgaag 301  Q
    | |||||||||||||||||||    
T  9760580 cgctcttctccccatctgaag 9760600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 201 - 308
Target Start/End: Original strand, 13444840 - 13444948
Alignment:
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggc-aaactctctcttctccccatctga 299  Q
    |||||| ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||| |||||||||  | | | ||||||||||||||||||||    
T  13444840 ttaacgaaataatgggaaaccctaatggccatccaatataaaataggttatggtccccaatacaccgtacacaacgatattctctcttctccccatctga 13444939  T
Q  300 agagaactt 308  Q
    |||||||||    
T  13444940 agagaactt 13444948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 128 - 300
Target Start/End: Complemental strand, 12109117 - 12108943
Alignment:
Q  128 tttctaattggataattaattaaatatttaattagtggatatggactcaat--gagtggatgtctggatggctcattaacggaataatgggaaaccctaa 225  Q
    ||||||||| ||||||| |||||| |||| |||| | ||||||||||||||  |||| ||||||| |||| ||| |||||||||||||| ||||    ||    
T  12109117 tttctaattagataattgattaaacatttgattaattgatatggactcaatatgagttgatgtctagatgactcgttaacggaataatgagaaataacaa 12109018  T
Q  226 tggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaa 300  Q
    ||||||| |||||||||||||  || ||||||||||| | ||||||||||||||| ||| |||| || |||||||    
T  12109017 tggtcattcaatataaaagagagtacggtcctcaatacatcgtacacggcaaactatcttttcttccgatctgaa 12108943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 105 - 183
Target Start/End: Complemental strand, 24643963 - 24643885
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtg 183  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||    
T  24643963 aattaagtaacaaggctattagatttctaattggataattaattaaatatttaattaattgatatggactcaacgagtg 24643885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 34300125 - 34300197
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaa 177  Q
    |||||||||||||| |||||| |||| |||||||||||||||||||||||||||||| | |||||| ||||||    
T  34300125 aattaagtaataagactattaaatttttaattggataattaattaaatatttaattaattgatatgaactcaa 34300197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 228
Target Start/End: Complemental strand, 17602006 - 17601883
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactca--atgagtggatgtctggatggctca 200  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| ||||||||||||  |||| |||||||| | ||| | ||    
T  17602006 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatggactcaacatgattggatgtccgaatgaccca 17601911  T
Q  201 ttaacggaataatgggaaaccctaatgg 228  Q
    ||||||||||||||  ||||||||||||    
T  17601910 ttaacggaataatgacaaaccctaatgg 17601883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 48033117 - 48033057
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcca 105  Q
    |||||| |||||||||| ||||||| |||||||||||||||||||||||||| ||||||||    
T  48033117 ttaccagggaccaaaatccaaactcaccatatttgcaaggaccaaaaacatattttagcca 48033057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 52401076 - 52401017
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||| |||||||||  ||||||||||||||||||| |||||||||||||| |||||||    
T  52401076 ttaccagggaccaaaacccaaactcgccatatttgcagggaccaaaaacatattttagcc 52401017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 8474607 - 8474551
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaatta 161  Q
    ||||||||||||| | |||||||||| |||||  |||||||||||||||||||||||    
T  8474607 aattaagtaataatgttattagatttataattcaataattaattaaatatttaatta 8474551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 22508794 - 22508738
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataattta 101  Q
    |||||||||||||||| |||||||||| ||||||||| ||||||||| |||| ||||    
T  22508794 ttaccaaggaccaaaactcaaactcgctatatttgcagggaccaaaatcatatttta 22508738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 46026128 - 46026076
Alignment:
Q  52 ggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||||||| ||||||||| ||||||||| |||||||||||||| |||||||    
T  46026128 ggaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttagcc 46026076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 46027417 - 46027476
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||| |||||||||||||||||||| ||||||||| |||||||||  ||| |||||||    
T  46027417 ttaccagggaccaaaattcaaactcgctatatttgcagggaccaaaagtatattttagcc 46027476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 52403124 - 52403183
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||| |||||||||  ||||||||||||||||||| ||||||||| |||| |||||||    
T  52403124 ttaccagggaccaaaacccaaactcgccatatttgcagggaccaaaagcatattttagcc 52403183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 20489358 - 20489416
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagc 103  Q
    |||||| |||||||||  |||||||| |||||||||| |||||||||||||| ||||||    
T  20489358 ttaccagggaccaaaacccaaactcgtcatatttgcagggaccaaaaacatattttagc 20489416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 103
Target Start/End: Complemental strand, 40476272 - 40476222
Alignment:
Q  53 gaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagc 103  Q
    ||||||||| ||||||||| ||||||||| |||||||||||||| ||||||    
T  40476272 gaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttagc 40476222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 44507808 - 44507858
Alignment:
Q  54 accaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||||||||||||||| ||||||||| ||||||||| |||| |||||||    
T  44507808 accaaaattcaaactcgctatatttgcagggaccaaaatcatattttagcc 44507858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 39819371 - 39819314
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttag 102  Q
    |||||| |||||||||||||||||||| ||||||||| |||| |||| |||| |||||    
T  39819371 ttaccagggaccaaaattcaaactcgctatatttgcagggactaaaaccatattttag 39819314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 101
Target Start/End: Complemental strand, 52707588 - 52707539
Alignment:
Q  52 ggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataattta 101  Q
    ||||||||| ||||| |||| |||||||||||||||||||||||| ||||    
T  52707588 ggaccaaaactcaaattcgctatatttgcaaggaccaaaaacatatttta 52707539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 977846 - 977906
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcca 105  Q
    ||||||||||||||||  |||||||| |||||||||| ||||||||| |||| || |||||    
T  977846 ttaccaaggaccaaaacccaaactcgtcatatttgcagggaccaaaagcatatttcagcca 977906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 38505586 - 38505638
Alignment:
Q  52 ggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    ||||||||| |||||||||||||||||||| ||| ||||| |||| |||||||    
T  38505586 ggaccaaaactcaaactcgccatatttgcagggagcaaaagcatattttagcc 38505638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 54437474 - 54437526
Alignment:
Q  52 ggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    ||||||||| ||||| |||| ||||||||| |||||||||||||| |||||||    
T  54437474 ggaccaaaactcaaattcgctatatttgcagggaccaaaaacatattttagcc 54437526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 35639562 - 35639507
Alignment:
Q  49 caaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||||||||| ||||||| || |||||| |||||||||||| |||| |||||||    
T  35639562 caaggaccaaaactcaaacttgctatattttcaaggaccaaaagcatattttagcc 35639507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 42446577 - 42446526
Alignment:
Q  53 gaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    ||||||||  ||||||||||||||||||| ||||||||| |||| |||||||    
T  42446577 gaccaaaacccaaactcgccatatttgcagggaccaaaagcatattttagcc 42446526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 43641202 - 43641139
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagccaatt 108  Q
    |||||| |||||| ||| ||||||||| ||||||||| |||| |||| |||| |||||||||||    
T  43641202 ttaccagggaccataatccaaactcgctatatttgcagggactaaaagcatattttagccaatt 43641139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 53121361 - 53121302
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||| |||| ||||  ||||||||| ||||||||| |||||||||||||| |||||||    
T  53121361 ttaccagggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 53121302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 308
Target Start/End: Original strand, 13837534 - 13837564
Alignment:
Q  278 actctctcttctccccatctgaagagaactt 308  Q
    |||||||||||||||||||||||||||||||    
T  13837534 actctctcttctccccatctgaagagaactt 13837564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 27103334 - 27103272
Alignment:
Q  109 aagtaataaggctatta-gatttctaattggataattaattaaatatttaattagtggatatg 170  Q
    |||||||||| | |||| |||||  ||||||||||||||||||||||||||||| | ||||||    
T  27103334 aagtaataagacaattaagattttaaattggataattaattaaatatttaattaattgatatg 27103272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 4705740 - 4705679
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagccaa 106  Q
    |||||| |||||||||   |||||||||||||||||| ||| ||||| |||| |||||||||    
T  4705740 ttaccagggaccaaaacctaaactcgccatatttgcagggatcaaaagcatattttagccaa 4705679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 17593532 - 17593487
Alignment:
Q  234 caatataaaagaggttatggtcctcaatataccgtacacggcaaac 279  Q
    |||||||||||||| | ||||||  |||||||||||||||||||||    
T  17593532 caatataaaagaggctctggtcccaaatataccgtacacggcaaac 17593487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 20488425 - 20488368
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttag 102  Q
    |||||| |||||||||  |||| || ||||||||||| |||||||||||||| |||||    
T  20488425 ttaccagggaccaaaacccaaattcaccatatttgcagggaccaaaaacatattttag 20488368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 24643877 - 24643817
Alignment:
Q  230 catccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctcccc 293  Q
    |||||||||||||||||| ||||| || ||||| |||||  ||| |||||||||||||||||||    
T  24643877 catccaatataaaagaggctatgg-ccccaatacaccgt--acgacaaactctctcttctcccc 24643817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 172; Significance: 2e-92; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 28683417 - 28683214
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  28683417 aattaagtaataaggctattagatttctaattggataaataattaaacatttaattagttgatatggactcaatgagtggatgtccggatggcccattaa 28683318  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  28683317 cggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatataccgtacacggcaaactctctcttctccccatctgaagaga 28683218  T
Q  305 actt 308  Q
    ||||    
T  28683217 actt 28683214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 31002063 - 31002267
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| | ||||||    
T  31002063 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagttgatatggactcaatgagtggatgtccggatgacccattaa 31002162  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaagag 303  Q
    ||||||||||||||||| |||||| |||||||||||||||||| |||||||| |||||||||||||||  ||| ||||||||||||||||||||||||||    
T  31002163 cggaataatgggaaaccataatggccatccaatataaaagaggctatggtccccaatataccgtacacaacaatactctctcttctccccatctgaagag 31002262  T
Q  304 aactt 308  Q
    |||||    
T  31002263 aactt 31002267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 30965014 - 30965218
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||| ||||||    
T  30965014 aattaagtaataagactattagatttctaattggataattaattaaatatttaattagttgatatggattcaatgagtggatgtccggatggcccattaa 30965113  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaagag 303  Q
    ||||||||||||||| |||||||| |||| ||||||||||||| |||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||    
T  30965114 cggaataatgggaaatcctaatggccatctaatataaaagaggctatggtccccaatataccgtacacgacaatactctctcttctccccatctgaagag 30965213  T
Q  304 aactt 308  Q
    |||||    
T  30965214 aactt 30965218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 31008041 - 31008245
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||| | ||||||    
T  31008041 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagttgatatggactcaatgagtggatgtccgaatgacccattaa 31008140  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaagag 303  Q
    ||||||||||||||||| |||||| |||||||||||||||||| |||||||| |||||||||||||||  ||| ||||||||||||||||||||||||||    
T  31008141 cggaataatgggaaaccataatggccatccaatataaaagaggctatggtccccaatataccgtacacaacaatactctctcttctccccatctgaagag 31008240  T
Q  304 aactt 308  Q
    |||||    
T  31008241 aactt 31008245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 105 - 297
Target Start/End: Complemental strand, 13150162 - 13149969
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||| | ||||||    
T  13150162 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagttgatatggactcaatgagtggatgtacggatgacccattaa 13150063  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatct 297  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| | |||||||||||| |||||    
T  13150062 cggaataatgggaaaccctaatggtcatctaatataaaagaggttatggtccccaatataccgtacacggcaatattctctcttctcctcatct 13149969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 44717278 - 44717074
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||| ||||||| ||||||    
T  44717278 aattaagtaataaggctattagatttctaattggataattaattaaatatataattagttgatatggacttaatgagtggatgtccggatggcccattaa 44717179  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaagag 303  Q
    ||||||||||| |||||||||||  |||||||||||||||||| |||||||| ||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  44717178 cggaataatggaaaaccctaatgaccatccaatataaaagaggctatggtccccaatacaccgtacacggcaatactatctcttctccccatctgaagag 44717079  T
Q  304 aactt 308  Q
    |||||    
T  44717078 aactt 44717074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 105 - 277
Target Start/End: Complemental strand, 35439843 - 35439671
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||| ||||||| ||||||    
T  35439843 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagttgatatgaacttaatgagtggatgtccggatggcccattaa 35439744  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa 277  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||    
T  35439743 cggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatataccgtacacggcaa 35439671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 122 - 308
Target Start/End: Complemental strand, 11049010 - 11048820
Alignment:
Q  122 attagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaacggaataatgggaaacc 221  Q
    ||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||    
T  11049010 attagatttctgattagataattaattaaatatttaattagttgatatggactcaatgggtggatgtctggatgacccattaacggaataatgggaaacc 11048911  T
Q  222 ctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggca----aactctctcttctccccatctgaagagaactt 308  Q
    |||||||  ||||||||||||||||| |||||||| ||||| | |||||||||||    ||||||||||||||||||||||||||||||||    
T  11048910 ctaatggcgatccaatataaaagaggctatggtccccaatacatcgtacacggcaaaccaactctctcttctccccatctgaagagaactt 11048820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 13455786 - 13455990
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| |||||||||||||  |||||||||||| ||||||| ||    
T  13455786 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatggactcaacatgagtggatgtccggatggccca 13455881  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctga 299  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||    
T  13455882 ttaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatacaccgtacacggcaatactctctcttctccccatctga 13455981  T
Q  300 agagaactt 308  Q
    |||||||||    
T  13455982 agagaactt 13455990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 13461727 - 13461931
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| |||||||||||||  |||||||||||| ||||||| ||    
T  13461727 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatggactcaacatgagtggatgtccggatggccca 13461822  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctga 299  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||    
T  13461823 ttaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatacaccgtacacggcaatactctctcttctccccatctga 13461922  T
Q  300 agagaactt 308  Q
    |||||||||    
T  13461923 agagaactt 13461931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 35085152 - 35084948
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| |||||||||||||  |||||||||||| ||||||| ||    
T  35085152 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatggactcaacatgagtggatgtccggatggccca 35085057  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctga 299  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  35085056 ttaacggaataatgggaaaccctaatggctatccaatataaaagaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctga 35084957  T
Q  300 agagaactt 308  Q
    |||||||||    
T  35084956 agagaactt 35084948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 35091125 - 35090921
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| ||||| |||||||  |||||||||||| ||||||| ||    
T  35091125 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatagactcaacatgagtggatgtccggatggccca 35091030  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctga 299  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  35091029 ttaacggaataatgggaaaccctaatggctatccaatataaaagaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctga 35090930  T
Q  300 agagaactt 308  Q
    |||||||||    
T  35090929 agagaactt 35090921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 19879281 - 19879489
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||| ||||||||||||| |||||  |||| | ||||||    
T  19879281 aattaagtaataaggctattagatttctaattggataaataattaaatatttaattaattgatattgactcaatgagtgaatgtccagatgacccattaa 19879380  T
Q  205 cggaataatgggaaaccctaatggtcatccaat-----ataaaagaggttatggtcctcaatataccgtacacggc-aaactctctcttctccccatctg 298  Q
    ||||||||||||||| | |||||| ||||||||     ||||||||||||||||||  ||||| | |||||||||| |||||||||||||||||||||||    
T  19879381 cggaataatgggaaa-cttaatggccatccaatataacataaaagaggttatggtcgccaatacatcgtacacggcaaaactctctcttctccccatctg 19879479  T
Q  299 aagagaactt 308  Q
    ||||||||||    
T  19879480 aagagaactt 19879489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 36750101 - 36750305
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    |||||||||||||||||| ||||||||||| || ||||| |||||||    |||||||||| |||||||||||||  |||||||||||| ||||||| ||    
T  36750101 aattaagtaataaggctaattagatttctattttggatatttaatta----tttaattagttgatatggactcaacatgagtggatgtccggatggccca 36750196  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctga 299  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||  ||||| |||||||||| ||| ||||||||||||||||||||||    
T  36750197 ttaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtctccaatacaccgtacacgacaatactctctcttctccccatctga 36750296  T
Q  300 agagaactt 308  Q
    |||||||||    
T  36750297 agagaactt 36750305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 105 - 223
Target Start/End: Complemental strand, 35442305 - 35442187
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||| | ||||||    
T  35442305 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagttgatatggacttaatgagtggatgtccggatgacccattaa 35442206  T
Q  205 cggaataatgggaaaccct 223  Q
    ||||||||||| |||||||    
T  35442205 cggaataatggaaaaccct 35442187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 105 - 256
Target Start/End: Complemental strand, 7771659 - 7771509
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggata-tggactcaatgagtggatgtctggatggctcatta 203  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||| ||||||||| ||| ||||| | |||||    
T  7771659 aattaagtaataaagctattagatttctaattggataattaattaaatatttaattagttgatacgggactcgatgagtggacgtccggatgacccatta 7771560  T
Q  204 acggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcc 256  Q
    || ||||||||||||| |||||| |||||||||||||||| ||||||||||||    
T  7771559 acagaataatgggaaa-cctaatcgtcatccaatataaaa-aggttatggtcc 7771509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 155 - 308
Target Start/End: Original strand, 23343290 - 23343444
Alignment:
Q  155 ttaattagtggatatggactcaatga--gtggatgtctggatggctcattaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatg 252  Q
    ||||||| ||||||||||||||||    ||||||||| ||||| | ||||||| ||||||||| |||||||||||  |||||||||||||||||| ||||    
T  23343290 ttaattaatggatatggactcaatataggtggatgtccggatgacccattaacagaataatgg-aaaccctaatgaccatccaatataaaagaggctatg 23343388  T
Q  253 gtcctcaatataccgtacacggcaaactctctcttctccccatctgaagagaactt 308  Q
    |||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  23343389 gtccccaatacaccgtacacgggaaactctctcttctccccatctgaagagaactt 23343444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 105 - 242
Target Start/End: Original strand, 29832892 - 29833035
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactc------aatgagtggatgtctggatggct 198  Q
    |||||||||||||| |||||||| || |||||||||||||||||||||||||||||| | |||||||||||      |||||||| ||||| | ||| |     
T  29832892 aattaagtaataagactattagacttttaattggataattaattaaatatttaattaattgatatggactcaatgggaatgagtgaatgtcagaatgacc 29832991  T
Q  199 cattaacggaataatgggaaaccctaatggtcatccaatataaa 242  Q
    ||| ||| |||||||| ||||||||||||||||| | |||||||    
T  29832992 catcaacagaataatgagaaaccctaatggtcattcgatataaa 29833035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 103 - 308
Target Start/End: Original strand, 31651316 - 31651515
Alignment:
Q  103 ccaattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcatt 202  Q
    |||||||||||||||  | ||||||||| ||  | |||||||||||||||||||||||| | |||||||||||||||||| ||||||| ||||   ||||    
T  31651316 ccaattaagtaataaatcaattagatttttatgtagataattaattaaatatttaattaattgatatggactcaatgagtcgatgtctagatgatccatt 31651415  T
Q  203 aacggaataatgggaaaccctaatggtcatc-caatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaag 301  Q
    ||  ||||||||||||||| |||||  |||| ||  ||  ||||||||| ||||| ||||||||||     |  ||||||| ||||||||||||||||||    
T  31651416 aaaagaataatgggaaaccttaatgaccatcacaccat--aagaggttacggtccccaatataccg-----gcaaaactctttcttctccccatctgaag 31651508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 23284680 - 23284783
Alignment:
Q  155 ttaattagtggatatggactcaat--gagtggatgtctggatggctcattaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatg 252  Q
    ||||||| ||||||| ||||||||  | ||||||||   |||| | |||||||||||||||| ||||| ||||||| |||| ||||||||||| ||||||    
T  23284680 ttaattaatggatattgactcaatatgggtggatgttctgatgacccattaacggaataatgtgaaactctaatggccatcaaatataaaagatgttatg 23284779  T
Q  253 gtcc 256  Q
    ||||    
T  23284780 gtcc 23284783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 35439014 - 35438974
Alignment:
Q  268 tacacggcaaactctctcttctccccatctgaagagaactt 308  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  35439014 tacacggcaaactctctcttctccccatctgaagagaactt 35438974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 1777528 - 1777469
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||| ||||||||| |||||||||| ||||||||| |||||||||||||| |||||||    
T  1777528 ttaccagggaccaaaactcaaactcgctatatttgcagggaccaaaaacatattttagcc 1777469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 23861811 - 23861752
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||| |||||||||| ||||||| ||||||||||| |||||||||||||| |||||||    
T  23861811 ttaccagggaccaaaatccaaactctccatatttgcagggaccaaaaacatattttagcc 23861752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 256
Target Start/End: Original strand, 28765341 - 28765420
Alignment:
Q  177 atgagtggatgtctggatggctcattaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcc 256  Q
    ||||||| |||| |||||| ||||| ||||||||||||| |||| |||||||  || ||||||||||||||  |||||||    
T  28765341 atgagtgaatgtatggatgactcatcaacggaataatggaaaactctaatggcgattcaatataaaagaggcaatggtcc 28765420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 21573995 - 21573938
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttag 102  Q
    |||||||||||||||| ||||||| | |||||||||| ||||||||| |||| |||||    
T  21573995 ttaccaaggaccaaaaatcaaacttgtcatatttgcagggaccaaaagcatattttag 21573938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 104
Target Start/End: Original strand, 3924877 - 3924925
Alignment:
Q  56 caaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||| ||||||||||||||||||||||| ||||| |||| |||||||    
T  3924877 caaaatccaaactcgccatatttgcaaggagcaaaagcatattttagcc 3924925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 2412428 - 2412487
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||| |||| ||||  ||||||||| ||||||||| |||||||||||||| |||||||    
T  2412428 ttaccagggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 2412487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 25977929 - 25977870
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||| |||||||||  ||||||| | ||||||||| |||||||||||||| |||||||    
T  25977929 ttaccagggaccaaaacccaaactcactatatttgcagggaccaaaaacatattttagcc 25977870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 25979251 - 25979310
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||| |||||||||  |||| |||| ||||||||| |||||||||||||| |||||||    
T  25979251 ttaccagggaccaaaacccaaattcgctatatttgcagggaccaaaaacatattttagcc 25979310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 25282457 - 25282408
Alignment:
Q  54 accaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagc 103  Q
    ||||||| ||||||||| ||||||| || |||||||||||||| ||||||    
T  25282457 accaaaactcaaactcgacatatttacagggaccaaaaacatattttagc 25282408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 106
Target Start/End: Original strand, 30844576 - 30844609
Alignment:
Q  73 atatttgcaaggaccaaaaacataatttagccaa 106  Q
    |||||||||||||||||||||||| |||||||||    
T  30844576 atatttgcaaggaccaaaaacatattttagccaa 30844609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 1778790 - 1778850
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcca 105  Q
    ||||||||||||||||  |||| |||| ||||||||| | ||||||| |||| ||||||||    
T  1778790 ttaccaaggaccaaaacccaaagtcgctatatttgcaggaaccaaaagcatattttagcca 1778850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 170; Significance: 3e-91; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 105 - 306
Target Start/End: Complemental strand, 28525858 - 28525657
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  28525858 aattaagtaataaggctgttagatttctaattggataattaattaaatatttaattagttgatatggactcaatgagtggatgtccggatggcccattaa 28525759  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  28525758 cggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatataccgtacatggcaaactctctcttctccccatctgaagaga 28525659  T
Q  305 ac 306  Q
    ||    
T  28525658 ac 28525657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 105 - 306
Target Start/End: Complemental strand, 28531954 - 28531753
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  28531954 aattaagtaataaggctgttagatttctaattggataattaattaaatatttaattagttgatatggactcaatgagtggatgtccggatggcccattaa 28531855  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||  |||||||||||||| ||||||||||||||||||||||||||||||||    
T  28531854 cggaataatgggaaaccctaatggccatccaatataaaagaggctatggtctccaatataccgtacatggcaaactctctcttctccccatctgaagaga 28531755  T
Q  305 ac 306  Q
    ||    
T  28531754 ac 28531753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 105 - 307
Target Start/End: Original strand, 41296966 - 41297169
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||| | ||||||    
T  41296966 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattaattgatatggactcaatgagtggatgtccggatgacccattaa 41297065  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaagag 303  Q
    | ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||| ||| ||||||||||||||||||||||||||    
T  41297066 cagaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccccaatacaccgtacacgacaatactctctcttctccccatctgaagag 41297165  T
Q  304 aact 307  Q
    ||||    
T  41297166 aact 41297169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 7390020 - 7389816
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||  ||||| | ||||||    
T  7390020 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagttgatatggacttaatgagtggatgttcggatgacccattaa 7389921  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggc-aaactctctcttctccccatctgaagag 303  Q
    |||||||||||||||| ||||||| |||||||||||||||||| |||||| | |||||||| ||||||||| ||||||||||||||||||||||||||||    
T  7389920 cggaataatgggaaactctaatggccatccaatataaaagaggctatggttcccaatatactgtacacggcaaaactctctcttctccccatctgaagag 7389821  T
Q  304 aactt 308  Q
    |||||    
T  7389820 aactt 7389816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 20499825 - 20500029
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||||||||| |||||||||||||| |  |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||    
T  20499825 aattaagtaataagactattagatttctagtaagataattaattaaatatttaattaattgatatggactcaatgagtggatgtctggatggcccattaa 20499924  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggc-aaactctctcttctccccatctgaagag 303  Q
    || |||||||| |||||||||||||||||||||| | |||||| |||||||| ||||| |||||||||||| ||||||||| ||||| |||| |||||||    
T  20499925 cgaaataatggaaaaccctaatggtcatccaataaataagaggctatggtccccaatacaccgtacacggcaaaactctctgttctctccatttgaagag 20500024  T
Q  304 aactt 308  Q
    |||||    
T  20500025 aactt 20500029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 12686651 - 12686448
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| |||||||||||||  |||||||||||| ||||||| ||    
T  12686651 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatggactcaacatgagtggatgtccggatggccca 12686556  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaa 300  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  12686555 ttaacggaataatgggaaaccctaatggccatcaaatataaaagaggctatggtccccaatacaccgtacacggcaaactctctcttctccccatctgaa 12686456  T
Q  301 gagaactt 308  Q
    ||||||||    
T  12686455 gagaactt 12686448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 12692753 - 12692550
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| |||||||||||||  |||||||||||| ||||||| ||    
T  12692753 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatggactcaacatgagtggatgtccggatggccca 12692658  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaa 300  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  12692657 ttaacggaataatgggaaaccctaatggccatcaaatataaaagaggctatggtccccaatacaccgtacacggcaaactctctcttctccccatctgaa 12692558  T
Q  301 gagaactt 308  Q
    ||||||||    
T  12692557 gagaactt 12692550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 105 - 307
Target Start/End: Complemental strand, 30384856 - 30384656
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||| | |||||||| |||||||||||||||||||||| ||||||||    
T  30384856 aattaagtaataaggctattggatttctaattagataattaattaaatatttcattaatagatatggattcaatgagtggatgtctggatgactcattaa 30384757  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    ||||||||| |||||  ||||| |||||||||||||||||||  |||||||| ||||| ||||||||||||||||  |||||||||||||||||||||||    
T  30384756 cggaataat-ggaaaatctaatagtcatccaatataaaagagactatggtcc-caatacaccgtacacggcaaacattctcttctccccatctgaagaga 30384659  T
Q  305 act 307  Q
    |||    
T  30384658 act 30384656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 19060246 - 19060040
Alignment:
Q  105 aattaagtaataaggct-attagatttctaattggataattaattaaatatttaattagtggatatggactcaat--gagtggatgtctggatggctcat 201  Q
    ||||||||||||||||| |||||||||||| || ||  ||||||||| || ||||||| ||||||||||||||||  ||||||||||||||||| | |||    
T  19060246 aattaagtaataaggcttattagatttctatttagaatattaattaattaattaattaatggatatggactcaatatgagtggatgtctggatgtcccat 19060147  T
Q  202 taacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaag 301  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||| | |  ||||| |||||||||||||||||| || |||||    
T  19060146 taacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatacatcagacacgacaaactctctcttctcccgatatgaag 19060047  T
Q  302 agaactt 308  Q
    |||||||    
T  19060046 agaactt 19060040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 30771967 - 30772172
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaat--gagtggatgtctggatggctcatt 202  Q
    ||||||||||||||||||| |  ||||| |||||||||||||||||||| ||||||||| ||||||||||||||  ||||||||||||||||| | ||||    
T  30771967 aattaagtaataaggctataaagtttcttattggataattaattaaataattaattagttgatatggactcaatatgagtggatgtctggatgacccatt 30772066  T
Q  203 aacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaaga 302  Q
    ||| ||||||||  ||||||| ||| |||||||||||| |||||  |||||||| ||||||| |  ||||| ||||||||||||||||||||||||||||    
T  30772067 aacagaataatgaaaaaccctgatgatcatccaatatagaagagactatggtccacaatatatcagacacgacaaactctctcttctccccatctgaaga 30772166  T
Q  303 gaactt 308  Q
    ||||||    
T  30772167 gaactt 30772172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 32094694 - 32094490
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| |||||||||||||  |||||| ||||| ||||||| ||    
T  32094694 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatggactcaacatgagtgtatgtccggatggccca 32094599  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctga 299  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||  |||| |||||||||| ||| ||||||||||||||||||||||    
T  32094598 ttaacggaataatgggaaaccctaatggccatctaatataaaagaggctatggtcccaaatacaccgtacacgacaatactctctcttctccccatctga 32094499  T
Q  300 agagaactt 308  Q
    |||||||||    
T  32094498 agagaactt 32094490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 144 - 308
Target Start/End: Complemental strand, 32097458 - 32097291
Alignment:
Q  144 taattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctcattaacggaataatgggaaaccctaatggtcatccaatataa 241  Q
    ||||||| |||||||||||| |||||||||||||  |||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  32097458 taattaattatttaattagttgatatggactcaacatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataa 32097359  T
Q  242 aagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaagagaactt 308  Q
    |||||| |||||||| ||||| ||||||||||| || ||||||| |||||||||||||||||||||||    
T  32097358 aagaggctatggtccccaatacaccgtacacggaaatactctctattctccccatctgaagagaactt 32097291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 165 - 309
Target Start/End: Original strand, 14609917 - 14610060
Alignment:
Q  165 gatatggactcaatgagtggatgtctggatggctcattaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatata 264  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||| ||||| |    
T  14609917 gatatggactcaatgagtggatgtccggatggcccattaacggaataatgg-aaaccctaatggtcatctaatgtaaaagaggttatggtccccaataca 14610015  T
Q  265 ccgtacacggcaaactctctcttctccccatctgaagagaacttt 309  Q
    ||| |||||||||||| ||| ||||||||||||||||||||||||    
T  14610016 ccgaacacggcaaactttcttttctccccatctgaagagaacttt 14610060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 19066580 - 19066381
Alignment:
Q  105 aattaagtaataaggct-attagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcatta 203  Q
    |||||||||| |||||| |||||||||||| || ||  ||||||| |    ||||||| |||||||||| |  ||||||||||||||||||| | |||||    
T  19066580 aattaagtaacaaggcttattagatttctatttagaatattaattga----ttaattaatggatatgga-tatatgagtggatgtctggatgacccatta 19066486  T
Q  204 acggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagag 303  Q
    ||| |||||||| |||||||||||  |||||||||||||| ||||| |||||| ||||| |||| ||||| |||||||||||||||||||||||||||||    
T  19066485 acgaaataatggaaaaccctaatgaccatccaatataaaataggttgtggtccccaatacaccggacacgacaaactctctcttctccccatctgaagag 19066386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 308
Target Start/End: Complemental strand, 26318675 - 26318529
Alignment:
Q  165 gatatggactcaat--gagtggatgtctggatggctcattaacggaataatgggaaa-ccctaatggtcatc-caatataaaagaggttatggtcctcaa 260  Q
    ||||||||||||||  ||||| |||||| |||||  |||||| | |||||||  ||| |||||||||||||| || |||| |||||| |||| ||| |||    
T  26318675 gatatggactcaatttgagtgaatgtctagatggtccattaatgaaataatgaaaaaaccctaatggtcatcacactatataagaggctatgatccccaa 26318576  T
Q  261 tataccgtacacggcaaactctctcttctccccatctgaagagaactt 308  Q
    |||| || | ||| ||||||||||||||| ||||||||||||||||||    
T  26318575 tatatcggaaacgacaaactctctcttct-cccatctgaagagaactt 26318529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 296
Target Start/End: Complemental strand, 33753634 - 33753516
Alignment:
Q  177 atgagtggatgtctggatggctcattaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggca 276  Q
    |||||||||| | ||||||   |||||||||||||||||||||||||||||  ||||  || ||||||||  |||| |||||| || |||||||||  ||    
T  33753634 atgagtggatttatggatgatacattaacggaataatgggaaaccctaatgaccatcatat-taaaagagcctatgttcctcagtacaccgtacacacca 33753536  T
Q  277 aactctctcttctccccatc 296  Q
     |||||||||||||||||||    
T  33753535 tactctctcttctccccatc 33753516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 215
Target Start/End: Complemental strand, 8706859 - 8706749
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||| ||||| | |||| |||||||||| ||||||| |||||||||||||||| | ||||||||  |||| ||||||| |   |||| | ||||||    
T  8706859 aattaagtgataagacgattaaatttctaattagataatttattaaatatttaattaattgatatggatccaataagtggatatgcagatgacccattaa 8706760  T
Q  205 cggaataatgg 215  Q
    |||||||||||    
T  8706759 cggaataatgg 8706749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 307
Target Start/End: Original strand, 26509557 - 26509737
Alignment:
Q  122 attagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaacggaataatgggaaacc 221  Q
    |||||||||||| |||||||||||||||  ||   || || | |||||| |||| |||||||||||| |||||||  ||| ||||||||| || |||||     
T  26509557 attagatttctatttggataattaattattta---aaataattgatatgaactctatgagtggatgtttggatggtccatcaacggaatattgagaaact 26509653  T
Q  222 ctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagagaact 307  Q
     ||||||  |  ||   || ||||||||||||||| | ||||||||||||||| |||||||| ||| |  |||||||| |||||||    
T  26509654 ttaatggcaaatcacactataagaggttatggtccacgatataccgtacacggtaaactctccctttt--ccatctgatgagaact 26509737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 105 - 175
Target Start/End: Original strand, 14609818 - 14609888
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactc 175  Q
    |||||||||||||  |||||||||||||| |  |||||||||||||| ||||||||| | |||||||||||    
T  14609818 aattaagtaataaaactattagatttctagtaagataattaattaaacatttaattaattgatatggactc 14609888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 6894010 - 6894070
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcca 105  Q
    |||||| |||||||||   ||||||| ||||||||||||||||||||||||| ||||||||    
T  6894010 ttaccagggaccaaaacctaaactcgtcatatttgcaaggaccaaaaacatattttagcca 6894070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 3936637 - 3936578
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||| |||||||||  ||||||||| ||||||||| |||||||||||||| |||||||    
T  3936637 ttaccagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 3936578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 3954111 - 3954052
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||| |||||||||  |||| |||  |||||||||||||||||||||||| |||||||    
T  3954111 ttaccagggaccaaaacccaaattcgatatatttgcaaggaccaaaaacatattttagcc 3954052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 35605572 - 35605630
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagc 103  Q
    |||||| | |||||||| |||||||| ||||||| || |||| ||||||||||||||||    
T  35605572 ttaccatgaaccaaaatccaaactcgtcatattttcagggactaaaaacataatttagc 35605630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 169; Significance: 1e-90; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 22220200 - 22219996
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||| ||||||    
T  22220200 aattaagtaataagggtattagatttctaattggataattaattaaatatttaattagttgatatggactcaatgaatggatgtccggatggcccattaa 22220101  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaagag 303  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  22220100 cggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctgaagag 22220001  T
Q  304 aactt 308  Q
    |||||    
T  22220000 aactt 22219996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 5542634 - 5542429
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcatta 203  Q
    |||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||| | |||||    
T  5542634 aattaagtaataagactaattagatttctaattggataaataattaaatatttaattagttgatatggactcaatgagtggatgtccggatgacccatta 5542535  T
Q  204 acggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaaga 302  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||| |||||||||||||||||||||||||    
T  5542534 acggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatacaccgtacacggcaatactctctcttctccccatctgaaga 5542435  T
Q  303 gaactt 308  Q
    ||||||    
T  5542434 gaactt 5542429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 10699716 - 10699920
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| | ||||||    
T  10699716 aattaagtaattaggctattagatttctaattggataattaattaaatatttaattagttgatatggactcaatgagtggatgtccggatgacccattaa 10699815  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaagag 303  Q
    |||| |||||||||||||||||||||||| ||||||||||||  |||||||| |||||||||||||||||||| ||||||||||||| |||||||| ||     
T  10699816 cggagtaatgggaaaccctaatggtcatcaaatataaaagagactatggtccccaatataccgtacacggcaatactctctcttctctccatctgacgaa 10699915  T
Q  304 aactt 308  Q
    |||||    
T  10699916 aactt 10699920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 42033484 - 42033691
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctc----a 200  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |    |    
T  42033484 aattaagtaataaggttattagatttctaattagataattaattaaatatttaattagttgatatggactcaatgagtggatgtccggatggcccgccca 42033583  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaa 300  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||| |  |||||||||||||||||||||||| |||||||||    
T  42033584 ttaacggaataatgggaaaccctaatggtcatccaatataaaggaggctatggtccccaatacattgtacacggcaaactctctcttctctccatctgaa 42033683  T
Q  301 gagaactt 308  Q
    ||||||||    
T  42033684 gagaactt 42033691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 10705525 - 10705728
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  10705525 aattaagtaataaaactattagatttctaattgaataattaattaaatatttaattagttgatatggactcaatgagtggatgtccggatggcccattaa 10705624  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaagag 303  Q
    ||||||||| |||||||||||| |||||| ||||||||||||| |||||||  |||||||||||||||| ||| ||||||||||||||||||||||||||    
T  10705625 cggaataat-ggaaaccctaatagtcatcaaatataaaagaggctatggtctccaatataccgtacacgacaatactctctcttctccccatctgaagag 10705723  T
Q  304 aactt 308  Q
    |||||    
T  10705724 aactt 10705728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 32890575 - 32890779
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| |||||||||||||  |||||||||||| ||||||| ||    
T  32890575 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatggactcaacatgagtggatgtccggatggccca 32890670  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctga 299  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  32890671 ttaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctga 32890770  T
Q  300 agagaactt 308  Q
    |||||||||    
T  32890771 agagaactt 32890779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 32896699 - 32896903
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| |||||||||||||  |||||||||||| ||||||| ||    
T  32896699 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatggactcaacatgagtggatgtccggatggccca 32896794  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctga 299  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  32896795 ttaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctga 32896894  T
Q  300 agagaactt 308  Q
    |||||||||    
T  32896895 agagaactt 32896903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 36818659 - 36818862
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    ||||||||||||||| || ||||||||||| || |||||||||||||    |||||||||| |||||||||||||  |||||||||||| ||||||| ||    
T  36818659 aattaagtaataaggttaattagatttctattttggataattaatta----tttaattagttgatatggactcaacatgagtggatgtccggatggccca 36818754  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaa 300  Q
    ||||||||||||||||||||||||||||  ||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||     
T  36818755 ttaacggaataatgggaaaccctaatggctatcaaatataaaagaggctatggtccccaatataccgtacacggcaaactctctcttctccccatctgat 36818854  T
Q  301 gagaactt 308  Q
    ||||||||    
T  36818855 gagaactt 36818862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 39736011 - 39735817
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||| | ||||||    
T  39736011 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagttgatatggactcaatcagtggatgtccggatgacccattaa 39735912  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggc-aaactctctcttctccccatctgaagag 303  Q
    |||||||| ||||||||||||||| |||| ||||||||||||| | |||         ||||||||||| | ||||||||||||||||||||||||||||    
T  39735911 cggaataa-gggaaaccctaatggccatctaatataaaagaggctctgg---------taccgtacacgacaaaactctctcttctccccatctgaagag 39735822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 42993472 - 42993272
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| |||||||||||||  |||||||||||| | ||||| ||    
T  42993472 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatggactcaacatgagtggatgtccg-atggccca 42993378  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctga 299  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| ||||||||| |||||   ||||||||||||||    
T  42993377 ttaacggaataatgggaaaccctaatcgccatccaatataaaagaggttatggtccccaatataccgaacacggcaatactct---ttctccccatctga 42993281  T
Q  300 agagaactt 308  Q
    |||||||||    
T  42993280 agagaactt 42993272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 14417648 - 14417831
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||  ||||| | ||||||    
T  14417648 aattaagtaataaggctattagatttctaattggataattaattgaatatttaattagttgatatgggctcaatgagtggatgttcggatgtcccattaa 14417747  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    || ||||||||||||                    |||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  14417748 cgaaataatgggaaa--------------------aaaagaggctatggtccccaatacaccgtacacggcaaactctctcttctccccatctgaagaga 14417827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 105 - 219
Target Start/End: Complemental strand, 39727757 - 39727643
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||| || ||||||    
T  39727757 aattaagtaataaggctattaaatttctaattggataattaattaaatatttaattaattgatatggactcaatgagtggatgtccggatagcccattaa 39727658  T
Q  205 cggaataatgggaaa 219  Q
    ||||| |||||||||    
T  39727657 cggaacaatgggaaa 39727643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 9934970 - 9935169
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    ||||||||||||| |||| ||||||||||| || |||||||||||||    |||||||  | |||||||||||||  ||||||||| || ||||| | ||    
T  9934970 aattaagtaataaagctaattagatttctattttggataattaatta----tttaatttattgatatggactcaacatgagtggatatccggatgaccca 9935065  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaa 300  Q
    ||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||| ||||| |||||||||| ||||  ||||||||||||||||||||    
T  9935066 ttaacggaataatgggaaa-cctaatggccatccaa-ataaaagaggctatggtccccaatacaccgtacacgacaaa--ctctcttctccccatctgaa 9935161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 109 - 309
Target Start/End: Original strand, 17954201 - 17954394
Alignment:
Q  109 aagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactc--aatgagtggatgtctggatggctcattaacg 206  Q
    |||||||||| |||||||||||||| ||    |||||||||| || ||||||||| |||||||||||  |||||||||||||   |||| | || |||||    
T  17954201 aagtaataagcctattagatttctattt----aattaattaattaattaattagttgatatggactcaaaatgagtggatgttcagatgacccactaacg 17954296  T
Q  207 gaataatgggaaaccctaa-tggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagagaa 305  Q
    ||||||||| ||||||||| || |  | || |||  |||||| |||| || ||||||   |||||||| |||||||| ||||||||||||| ||||||||    
T  17954297 gaataatggaaaaccctaattgatattacactat--aagaggctatgatcatcaata---cgtacacgacaaactctttcttctccccatc-gaagagaa 17954390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 1883267 - 1883185
Alignment:
Q  155 ttaattagtggatatggactcaat--gagtggatgtctggatggctcattaacggaataatgggaaaccctaatggtcatcca 235  Q
    ||||||| ||||||||||||||||  ||||||||||| ||||| | |||||||| |||||||||||||| |||||| ||||||    
T  1883267 ttaattaatggatatggactcaatatgagtggatgtccggatgacccattaacgaaataatgggaaaccttaatggccatcca 1883185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 14197877 - 14197825
Alignment:
Q  52 ggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||||||| ||||||||||||||||||| |||||||||||||| |||||||    
T  14197877 ggaccaaaatccaaactcgccatatttgcagggaccaaaaacatattttagcc 14197825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 308
Target Start/End: Complemental strand, 1883147 - 1883088
Alignment:
Q  249 tatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagagaactt 308  Q
    |||||||| ||||| ||  ||||||||||||| |||||||||||||||||||||||||||    
T  1883147 tatggtccccaatacacaatacacggcaaactttctcttctccccatctgaagagaactt 1883088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 39440429 - 39440480
Alignment:
Q  52 ggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagc 103  Q
    ||||||||| |||||||||||||||||||||||||||||| |||| ||||||    
T  39440429 ggaccaaaactcaaactcgccatatttgcaaggaccaaaagcatattttagc 39440480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 308
Target Start/End: Complemental strand, 39727645 - 39727577
Alignment:
Q  241 aaagaggttatggtcctcaatataccgtacacggcaaa-ctctctcttctccccatctgaagagaactt 308  Q
    ||||||| |||||||| |||||||||||||||  |||| ||||||||||||||||||| ||||| ||||    
T  39727645 aaagaggatatggtccccaatataccgtacacaacaaaactctctcttctccccatctcaagagtactt 39727577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 6783637 - 6783578
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||| ||||||||||||||||| || |||||||||||  ||||||||||||| |||||||    
T  6783637 ttacgaaggaccaaaattcaaattcaccatatttgcagtgaccaaaaacatattttagcc 6783578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 307
Target Start/End: Original strand, 1171215 - 1171249
Alignment:
Q  273 ggcaaactctctcttctccccatctgaagagaact 307  Q
    |||||||||||||||||||||||||||||||||||    
T  1171215 ggcaaactctctcttctccccatctgaagagaact 1171249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 3483685 - 3483635
Alignment:
Q  52 ggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttag 102  Q
    ||||||||| |||||||||| ||||||||| |||||||||||||| |||||    
T  3483685 ggaccaaaactcaaactcgctatatttgcagggaccaaaaacatattttag 3483635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 28998000 - 28998054
Alignment:
Q  52 ggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagccaa 106  Q
    |||||||||  ||||||||| ||||||||| |||||||||||||| |||||||||    
T  28998000 ggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagccaa 28998054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 41354530 - 41354472
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagc 103  Q
    |||||| | |||||||||||||||||| ||||||  |||||||||||||||| ||||||    
T  41354530 ttaccaggaaccaaaattcaaactcgctatatttataaggaccaaaaacatattttagc 41354472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 1420449 - 1420501
Alignment:
Q  52 ggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    ||||||| || ||||||||| ||||||||| |||||||||||||| |||||||    
T  1420449 ggaccaatatccaaactcgctatatttgcagggaccaaaaacatattttagcc 1420501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 39439983 - 39439924
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||| || |||||| ||||||| |||||||||||| ||||||||| |||| |||||||    
T  39439983 ttaccagggtccaaaactcaaactagccatatttgcagggaccaaaatcatattttagcc 39439924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 170
Target Start/End: Original strand, 11641418 - 11641456
Alignment:
Q  132 taattggataattaattaaatatttaattagtggatatg 170  Q
    |||||||||||||||||||||||||||||| | ||||||    
T  11641418 taattggataattaattaaatatttaattaattgatatg 11641456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 38455499 - 38455449
Alignment:
Q  52 ggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttag 102  Q
    ||||||||| ||||| || | |||||||||||||||||||||||| |||||    
T  38455499 ggaccaaaactcaaattcactatatttgcaaggaccaaaaacatattttag 38455449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 104
Target Start/End: Complemental strand, 9832247 - 9832215
Alignment:
Q  72 catatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||||||||||||||||| ||||||||||||    
T  9832247 catatttgcaaggaccaaaaccataatttagcc 9832215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 169; Significance: 1e-90; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 8651276 - 8651072
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||| ||||||    
T  8651276 aattaagtaataagactattagatttctaattggataattaattaaatatttaattagttgatatggacttaatgagtggatgtccggatggcccattaa 8651177  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaagag 303  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  8651176 cggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctgaagag 8651077  T
Q  304 aactt 308  Q
    |||||    
T  8651076 aactt 8651072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 31756691 - 31756489
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||| | ||||||    
T  31756691 aattaagtaataaggctattagatttctaattggataattaattaaataattaattagttgatatggactcaatgagtggatgtccggatgacccattaa 31756592  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
     ||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||| |  ||||| ||||||||||||||||||||||||||||||    
T  31756591 -ggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatatatcaaacacgacaaactctctcttctccccatctgaagaga 31756493  T
Q  305 actt 308  Q
    ||||    
T  31756492 actt 31756489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 21191343 - 21191138
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcatta 203  Q
    |||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||  ||||||| |||||    
T  21191343 aattaagtaatatggctaattagatttctaattggataaataattaaatatttaattagttgatatggattcaatgagtggatgttcggatggcccatta 21191244  T
Q  204 acggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaaga 302  Q
    ||||||||||| |||||| |||||| |||||||||||||||||| |||||||| ||||||||| |||||||||| |||||||||||||||||||||||||    
T  21191243 acggaataatgtgaaaccataatggccatccaatataaaagaggctatggtccccaatataccttacacggcaatactctctcttctccccatctgaaga 21191144  T
Q  303 gaactt 308  Q
    ||||||    
T  21191143 gaactt 21191138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 21197514 - 21197299
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcatta 203  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||    
T  21197514 aattaagtaataaggctaattagatttctaattggataaataattaaatatttaattagttgatatggactcaatgagtggatgtccggatggcccatta 21197415  T
Q  204 acggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-----------actctctcttctccc 292  Q
    |||||||||||||||| |||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||           |||||||||||||||    
T  21197414 acggaataatgggaaaacctaatggccatccaatataaaagaggctatggtccccaatataccgtacacggcaatactcggcaatactctctcttctccc 21197315  T
Q  293 catctgaagagaactt 308  Q
    ||||||||||||||||    
T  21197314 catctgaagagaactt 21197299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 21783798 - 21783593
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||| | ||||||    
T  21783798 aattaagtaataaaactattaaatttctaattggataattaattaaatatttaattagttgatatggacttaatgagtggatgtccggatgacccattaa 21783699  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatg--gtcctcaatataccgtacacggc-aaactctctcttctccccatctgaag 301  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||  |||| ||||| |||||||||||| ||||||||||||||||||||||||||    
T  21783698 cggaataatgggaaaccctaatgg-catccaatataaaagaggctatggtgtccccaatacaccgtacacggcaaaactctctcttctccccatctgaag 21783600  T
Q  302 agaactt 308  Q
    |||||||    
T  21783599 agaactt 21783593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 109 - 308
Target Start/End: Complemental strand, 30906049 - 30905851
Alignment:
Q  109 aagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaacgga 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||   | ||||| ||    
T  30906049 aagtaataaggctattagatttctaattggataattaattaaatatttaattagttgatatggactctatgagtagatgtctggatgatcctttaacaga 30905950  T
Q  209 ataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagagaactt 308  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||| | ||||| ||||||| || |||||||||||||| |||||||||||||||||||    
T  30905949 ataatgggaaaccataatggtcatccaatataaaagaggctatggttcccaatacaccgtactcgacaaactctctcttc-ccccatctgaagagaactt 30905851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 21771037 - 21770836
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||| | ||||||    
T  21771037 aattaagtaataaaactattagatttctaattgaataattaattaaatatttaattagttgatatggacttaatgagtggatgtccggatgac-cattaa 21770939  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggc-aaactctctcttctccccatctgaagag 303  Q
    |||||||||||||||||||||||| || ||||||||||||||| || ||||| ||||| |||||||||||| ||||||||||||||  ||||||||||||    
T  21770938 cggaataatgggaaaccctaatggccaaccaatataaaagaggctacggtccccaatacaccgtacacggcaaaactctctcttct--ccatctgaagag 21770841  T
Q  304 aactt 308  Q
    |||||    
T  21770840 aactt 21770836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 127 - 308
Target Start/End: Complemental strand, 21789999 - 21789816
Alignment:
Q  127 atttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaacggaataatgggaaaccctaat 226  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||| | ||||||||||||||||||||||||||||    
T  21789999 atttctaattggataattaattaaatatttaattagttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaat 21789900  T
Q  227 ggtcatccaatataaaagaggttatg--gtcctcaatataccgtacacggc-aaactctctcttctccccatctgaagagaactt 308  Q
    || |||||||||||||||||| ||||  |||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  21789899 gg-catccaatataaaagaggctatggtgtccccaatacaccgtacacggcaaaactctctcttctccccatctgaagagaactt 21789816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 4580794 - 4580590
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| |||||||||||||  |||||||||||| ||||| | ||    
T  4580794 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatggactcaacatgagtggatgtccggatgaccca 4580699  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctga 299  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||    
T  4580698 ttaatggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatacaccgtacacggcaatactctctcttctccccatctga 4580599  T
Q  300 agagaactt 308  Q
    |||||||||    
T  4580598 agagaactt 4580590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 25353900 - 25354102
Alignment:
Q  105 aattaagtaataaggct-attagatttctaattggataattaattaaatatttaattagtggatatggactca--atgagtggatgtctggatggctcat 201  Q
    ||||||||||||||||| ||||||||| |  |||||||||||||    |||||||||||| ||||||||||||  |||||||||| || ||||||| |||    
T  25353900 aattaagtaataaggctaattagatttat-tttggataattaat----tatttaattagttgatatggactcaacatgagtggatatccggatggcccat 25353994  T
Q  202 taacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaa 300  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||| |||||||| ||||| |||||||||| ||| |||||||||||||||||||||||    
T  25353995 taacggaataatgggaaactctaatggtcatctaatataaaagaggctatggtccccaatacaccgtacacgacaatactctctcttctccccatctgaa 25354094  T
Q  301 gagaactt 308  Q
    ||||||||    
T  25354095 gagaactt 25354102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 25343314 - 25343515
Alignment:
Q  105 aattaagtaataaggct-attagatttctaattggataattaattaaatatttaattagtggatatggactca--atgagtggatgtctggatggctcat 201  Q
    ||||||||||||||||| ||||||||| |  |||||||||||||    |||||||||||| ||||||||||||  ||||||||||||  ||||||  |||    
T  25343314 aattaagtaataaggctaattagatttat-tttggataattaat----tatttaattagttgatatggactcaacatgagtggatgttcggatggtccat 25343408  T
Q  202 taacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaa 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| |||||||||| ||| |||||||||||||||||||||||    
T  25343409 taacggaataatgggaaaccctaatggtcatccaatataaaagaggctat-gtccccaatacaccgtacacgacaatactctctcttctccccatctgaa 25343507  T
Q  301 gagaactt 308  Q
    ||||||||    
T  25343508 gagaactt 25343515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 166 - 308
Target Start/End: Original strand, 17581384 - 17581523
Alignment:
Q  166 atatggactcaatgagtggatgtctggatggctcattaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatatac 265  Q
    |||||||||||||||||||||||| ||||| | ||||||||||||||||||||| ||||||   | |||||||||||||||| |||||||| |||   ||    
T  17581384 atatggactcaatgagtggatgtccggatgacccattaacggaataatgggaaa-cctaataaccgtccaatataaaagaggctatggtccccaa---ac 17581479  T
Q  266 cgtacacggc-aaactctctcttctccccatctgaagagaactt 308  Q
     ||||||| | |||||||||||||||||||||||||||||||||    
T  17581480 tgtacacgacaaaactctctcttctccccatctgaagagaactt 17581523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 1106000 - 1106203
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaa-ttagtggatatggactcaatgagtggatgtctggatggctcatta 203  Q
    |||||| | |||||||||||| |||| ||| |  |||||||||||||||||||| ||| |  ||||||| |||||||||||||||| ||||| |||||||    
T  1106000 aattaaatgataaggctattaaatttttaactacataattaattaaatatttaaattaattaatatggattcaatgagtggatgtccggatgactcatta 1106099  T
Q  204 acggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggc-aaactctctcttctccccatctgaaga 302  Q
    ||| |||||||| ||||| ||||| ||||  | |||||| |||| |||||||| ||  |||| ||||||| | ||||| ||||||||||| || ||||||    
T  1106100 acgaaataatggaaaaccgtaatgatcattgagtataaatgaggatatggtcccca--atactgtacacgtcaaaactttctcttctccctatgtgaaga 1106197  T
Q  303 gaactt 308  Q
    ||||||    
T  1106198 gaactt 1106203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 181 - 301
Target Start/End: Original strand, 28728047 - 28728166
Alignment:
Q  181 gtggatgtctggatggctcattaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaact 280  Q
    ||||||||| ||||||  |||||||||||||||||||||||||||||| ||||| |||| || |||| |||||||| ||||||||||||||| |||||      
T  28728047 gtggatgtccggatggtccattaacggaataatgggaaaccctaatggccatcctatat-aatgaggctatggtccccaatataccgtacacagcaaaac 28728145  T
Q  281 ctctcttctccccatctgaag 301  Q
    | |||||||||||||||||||    
T  28728146 cgctcttctccccatctgaag 28728166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 6096997 - 6097067
Alignment:
Q  105 aattaagtaataaggctattagatttctaattg-gataattaattaaatatttaattagtggatatggact 174  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||| ||||||||||    
T  6096997 aattaagtaataaggctattaaatttctaattttgataattaattaaatatttaattagttgatatggact 6097067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 107 - 230
Target Start/End: Complemental strand, 12802009 - 12801887
Alignment:
Q  107 ttaagtaataaggct-attagatttctaattggataattaattaaatatttaattagtggatatggactcaat--gagtggatgtctggatggctcatta 203  Q
    ||||||||||| ||| |||||||||||| || ||  ||||||||| ||||||||    |||| ||||||||||  ||||||||||||||||| | |||||    
T  12802009 ttaagtaataaagcttattagatttctatttagaatattaattaattatttaat----ggatttggactcaatatgagtggatgtctggatgacccatta 12801914  T
Q  204 acggaataatgggaaaccctaatggtc 230  Q
    | |||||||||||||||||||||||||    
T  12801913 atggaataatgggaaaccctaatggtc 12801887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 17581291 - 17581356
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatg 170  Q
    |||||||||||||| ||||||   ||||||||||||||||||||||||||||||||||| ||||||    
T  17581291 aattaagtaataagactattatggttctaattggataattaattaaatatttaattagttgatatg 17581356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 17517309 - 17517368
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||| ||||||||| |||||||||||||||||||| |||||||||||||| |||||||    
T  17517309 ttaccagggaccaaaactcaaactcgccatatttgcagggaccaaaaacatattttagcc 17517368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 25440673 - 25440730
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttag 102  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  25440673 ttaccagggaccaaaattcaaactcgccatatttgtaaggaccaaaaatatattttag 25440730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 29291411 - 29291359
Alignment:
Q  52 ggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||||||  ||||||||||||||||||||||||||||| |||| |||||||    
T  29291411 ggaccaaaacccaaactcgccatatttgcaaggaccaaaagcatattttagcc 29291359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 1283280 - 1283318
Alignment:
Q  123 ttagatttctaattggataattaattaaatatttaatta 161  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  1283280 ttagatttctaattggataattaattatatatttaatta 1283318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 1974159 - 1974212
Alignment:
Q  52 ggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcca 105  Q
    ||||||||| ||||| |||| ||||||||||||| |||||||||| ||||||||    
T  1974159 ggaccaaaactcaaattcgctatatttgcaaggatcaaaaacatattttagcca 1974212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 3279499 - 3279555
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataattta 101  Q
    |||||| | |||||||||||||||||| ||||||||| ||| |||||||||| ||||    
T  3279499 ttaccaggaaccaaaattcaaactcgctatatttgcagggatcaaaaacatatttta 3279555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 230
Target Start/End: Complemental strand, 12801674 - 12801643
Alignment:
Q  199 cattaacggaataatgggaaaccctaatggtc 230  Q
    ||||||||||||||||||||||||||||||||    
T  12801674 cattaacggaataatgggaaaccctaatggtc 12801643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 17516214 - 17516164
Alignment:
Q  52 ggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttag 102  Q
    |||||||||  ||||||| ||||||||||| |||||||||||||| |||||    
T  17516214 ggaccaaaacccaaactcaccatatttgcagggaccaaaaacatattttag 17516164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 3276419 - 3276367
Alignment:
Q  52 ggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||| ||||| |||| |||| ||||||||| |||||||||||||| |||||||    
T  3276419 ggactaaaatccaaattcgctatatttgcagggaccaaaaacatattttagcc 3276367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 20897497 - 20897561
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagccaatta 109  Q
    |||||| |||||||||  |||| || | ||||||||| ||||||||| |||| ||||||||||||    
T  20897497 ttaccagggaccaaaacccaaattcactatatttgcagggaccaaaaccatattttagccaatta 20897561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 169; Significance: 1e-90; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 26957276 - 26957072
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  26957276 aattaagtaataagactattagatttctaattggataattaattaaatatttaattagttgatatggactcaatgagtggatgtccggatggctcattaa 26957177  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaagag 303  Q
    |||||||||||||||||||||||| |||| ||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  26957176 cggaataatgggaaaccctaatggccatcaaatataaaagaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctgaagag 26957077  T
Q  304 aactt 308  Q
    |||||    
T  26957076 aactt 26957072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 48166865 - 48167069
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||| ||||||    
T  48166865 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagttgatatggactcaatgagtggatgttcggatggcccattaa 48166964  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaagag 303  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  48166965 cggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctgaagag 48167064  T
Q  304 aactt 308  Q
    |||||    
T  48167065 aactt 48167069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 48160646 - 48160850
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||| ||||||    
T  48160646 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagttgatatggactcaatgagtggatgttcggatggcccattaa 48160745  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaagag 303  Q
    |||||||||||||||||||||||| |||| ||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  48160746 cggaataatgggaaaccctaatggccatcaaatataaaagaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctgaagag 48160845  T
Q  304 aactt 308  Q
    |||||    
T  48160846 aactt 48160850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 26972027 - 26971824
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||    
T  26972027 aattaagtgataaggatattagatttctaattggataattaattaaatatttaattagttgatatggactcaatgagtggatgtctggatggtccattaa 26971928  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaagag 303  Q
    ||||||||| |||||||||||||| |||||||||||||||||  |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  26971927 cggaataat-ggaaaccctaatggccatccaatataaaagagactatggtccccaatataccgtacacggcaatactctctcttctccccatctgaagag 26971829  T
Q  304 aactt 308  Q
    |||||    
T  26971828 aactt 26971824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 105 - 305
Target Start/End: Complemental strand, 10733822 - 10733624
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||| |||||||||||||| ||||||| ||||||    
T  10733822 aattaagtaataaggctattagatttctaattggataattaattaagtatttgattagttgatatggacttaatgagtggatgtccggatggcccattaa 10733723  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    |||||||||||||||||||||||| ||||||||||  |||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  10733722 cggaataatgggaaaccctaatggccatccaatat--aagaggctatggtccccaatacaccgtacacggcaaactctctcttctccccatctgaagaga 10733625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 105 - 305
Target Start/End: Complemental strand, 10947591 - 10947393
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||| |||||||||||||| ||||||| ||||||    
T  10947591 aattaagtaataaggctattagatttctaattggataattaattaagtatttgattagttgatatggacttaatgagtggatgtccggatggcccattaa 10947492  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    |||||||||||||||||||||||| ||||||||||  |||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  10947491 cggaataatgggaaaccctaatggccatccaatat--aagaggctatggtccccaatacaccgtacacggcaaactctctcttctccccatctgaagaga 10947394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 6257677 - 6257474
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||| || ||||||| ||||||    
T  6257677 aattaagtaataaagctattagatttctaattggataattaattaaatatttaattaattgatatgggctcaatgagtggatatccggatggcccattaa 6257578  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaagag 303  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||    
T  6257577 cggaataat-ggaaaccctaatggtcatccaatataaaagaggctatggtccccaatacaccgtacacggcaatactctctcttctccccatctgaagag 6257479  T
Q  304 aactt 308  Q
    |||||    
T  6257478 aactt 6257474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 105 - 305
Target Start/End: Complemental strand, 10739809 - 10739611
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||| |||||||||| |||||||||||||| ||||| | ||||||    
T  10739809 aattaagtaataaggctattagatttctgattggataattaattaagtatttgattagttgatatggacttaatgagtggatgtccggatgacccattaa 10739710  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    |||||||||||||||||||||||| ||||||||||  |||||| |||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||    
T  10739709 cggaataatgggaaaccctaatggccatccaatat--aagaggctatggtccccaatacaccgtacacggtaaactctctcttctccccatctgaagaga 10739612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 105 - 305
Target Start/End: Complemental strand, 10953578 - 10953380
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||| |||||||||| |||||||||||||| ||||| | ||||||    
T  10953578 aattaagtaataaggctattagatttctgattggataattaattaagtatttgattagttgatatggacttaatgagtggatgtccggatgacccattaa 10953479  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    |||||||||||||||||||||||| ||||||||||  |||||| |||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||    
T  10953478 cggaataatgggaaaccctaatggccatccaatat--aagaggctatggtccccaatacaccgtacacggtaaactctctcttctccccatctgaagaga 10953381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 109 - 308
Target Start/End: Original strand, 50168286 - 50168485
Alignment:
Q  109 aagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaacgga 208  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | | ||| | |||||||| |    
T  50168286 aagtaacaaggctattagatttctaattggataattaattaaatatttaattagttgatatggactcaatgagtggatgaccgaatgacccattaacgaa 50168385  T
Q  209 ataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagagaactt 308  Q
    ||||||| |||||||||||||||| |||||||||||||| |||||||| ||||| ||||||||||  ||||||||| ||||| |||||||||||||||||    
T  50168386 ataatggaaaaccctaatggtcattcaatataaaagaggctatggtccccaatacaccgtacacgcaaaactctcttttctctccatctgaagagaactt 50168485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 44832087 - 44831888
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||| ||| |||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||  ||||||    
T  44832087 aattaagtaataaggttataagatttttaattagataattaattaaatatttaattagttgatatggactcaatgagtgcatgtccggatggtccattaa 44831988  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||    ||||||||||||||| |||| |||||||    
T  44831987 cggaataattggaaaccctaatggtcatccaatataaaagaggctatggtccccaatataccgaacac----aactctctcttctccgcatccgaagaga 44831892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 24287674 - 24287877
Alignment:
Q  105 aattaagtaataaggct-attagatttcta-attggataattaattaaatatttaattagtggatatggactca--atgagtggatgtctggatggctca 200  Q
    ||||||||||||||||| ||||||||||||  |||||    || ||||||||||||||||| ||||||||||||  ||||||||||||| ||||||| ||    
T  24287674 aattaagtaataaggctaattagatttctattttgga----tatttaaatatttaattagttgatatggactcaacatgagtggatgtccggatggccca 24287769  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctga 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| |||||||||||||| ||||||||||||||||||||||    
T  24287770 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggctat-gtccccaatacaccgtacacggcaatactctctcttctccccatctga 24287868  T
Q  300 agagaactt 308  Q
    |||||||||    
T  24287869 agagaactt 24287877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 114 - 308
Target Start/End: Original strand, 50155657 - 50155849
Alignment:
Q  114 ataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaacggaataat 213  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||   ||||||||||| |||||   |||||||| | ||||    
T  50155657 ataaggctattagatttttaattggataattaattaaatatttaattagttgatatggactc---gagtggatgtccggatgatccattaacgaactaat 50155753  T
Q  214 gggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctc-ttctccccatctgaagagaactt 308  Q
    | |||||| ||||| ||||||||||||||||| |||||||||| ||||| ||||||||||  |||||||||| |||||| |||||||| |||||||    
T  50155754 gagaaaccataatgatcatccaatataaaagaagttatggtccccaatacaccgtacacgcaaaactctctctttctcctcatctgaaaagaactt 50155849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 105 - 272
Target Start/End: Original strand, 35177481 - 35177650
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaat--gagtggatgtctggatggctcatt 202  Q
    ||||||||||||||||| |||| ||||||||| |||||||| |||||||||||||| || || |||||||||||  ||||| ||||||||||| |  |||    
T  35177481 aattaagtaataaggctgttagttttctaattagataattatttaaatatttaatttgttgacatggactcaatacgagtgtatgtctggatgacctatt 35177580  T
Q  203 aacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacac 272  Q
    || ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  35177581 aaaggaataatgagaaaccctaatggtcatccaatataaaagaggttatagtcctcaatacaccgtacac 35177650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 182 - 308
Target Start/End: Complemental strand, 33458662 - 33458536
Alignment:
Q  182 tggatgtctggatggctcattaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactc 281  Q
    |||||||||||||||| |||||||| ||||||| |||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||| ||||||     
T  33458662 tggatgtctggatggcccattaacgaaataatgcgaaaccctaacggtcatccaatataaaagaggctatggtccccaatataccgtacacgacaaactt 33458563  T
Q  282 tctcttctccccatctgaagagaactt 308  Q
    |||||||||||||||||||||||||||    
T  33458562 tctcttctccccatctgaagagaactt 33458536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 182 - 308
Target Start/End: Complemental strand, 33461787 - 33461661
Alignment:
Q  182 tggatgtctggatggctcattaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactc 281  Q
    |||||||| ||||| ||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||    
T  33461787 tggatgtccggatgactcattaacgggataatgggaaaccctgatgatcatccaatataaaagaggctatggtccccaatataccgtacacggtaaactc 33461688  T
Q  282 tctcttctccccatctgaagagaactt 308  Q
    ||||||||||||||||||| |||||||    
T  33461687 tctcttctccccatctgaaaagaactt 33461661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 105 - 307
Target Start/End: Complemental strand, 17627247 - 17627050
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||||||||| |||||||||||| |||| ||||||||||||||||||| |||| |  |||||||||||||||| ||||||| ||||| | ||||||    
T  17627247 aattaagtaataagcctattagatttccaattagataattaattaaatatttgattaattaatatggactcaatgaggggatgtcaggatgacccattaa 17627148  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    ||||||||| | |||||||||||||  |  |||||||||||||  ||| ||| ||||| || ||||||     ||  |||||||||||||||||||||||    
T  17627147 cggaataattgaaaaccctaatggttgttaaatataaaagaggccatgatccccaatacacagtacac-----acattctcttctccccatctgaagaga 17627053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 49976288 - 49976477
Alignment:
Q  105 aattaagtaataaggct-attagatttctaattggataattaattaaatatttaattagtggatatggactcaat--gagtggatgtctggatggctcat 201  Q
    ||||||||||||||||| ||||||||| |  || ||  |||||||||    ||||||| |||||||||| |||||  | |||||||||||||||          
T  49976288 aattaagtaataaggcttattagatttttgtttagaatattaattaa----ttaattaatggatatggattcaatatgggtggatgtctggatg------ 49976377  T
Q  202 taacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaag 301  Q
      ||| |||||||| |||||||||||| ||||||||||||||||||||||||||  ||     |||||||||||||||||||||||||||||||||||||    
T  49976378 --acgtaataatggaaaaccctaatggccatccaatataaaagaggttatggtctcca-----ccgtacacggcaaactctctcttctccccatctgaag 49976470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 105 - 305
Target Start/End: Complemental strand, 19686790 - 19686593
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||| ||||||| || ||| |||| ||||   |||||||||| |||||||||||| | |||||| ||||||  |||||||||||||||| | ||||||    
T  19686790 aattaaataataagactgttaaatttataataaaataattaattgaatatttaattaattgatatgaactcaagcagtggatgtctggatgacccattaa 19686691  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    || ||||||| ||||||||| ||  |||||||||||||||||  ||| || ||||||| | |  ||| ||||||||||||||||||| ||||  ||||||    
T  19686690 cgaaataatgagaaaccctactgaccatccaatataaaagagactatagt-ctcaatacatc--acaaggcaaactctctcttctcctcatcccaagaga 19686594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 230 - 308
Target Start/End: Original strand, 4632193 - 4632272
Alignment:
Q  230 catccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaagagaactt 308  Q
    ||||||||||||||||||||||||||| |||||||| ||||| | ||| ||| |||||||| | ||||||||||||||||    
T  4632193 catccaatataaaagaggttatggtccccaatatacagtacatgacaatactttctcttcttctcatctgaagagaactt 4632272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 28704237 - 28704340
Alignment:
Q  122 attagatttctaattggataattaattaaatatttaattagtggatatggactca--atgagtggatgtctggatggctcattaacggaataatgggaaa 219  Q
    ||||||||| || |||||||||||||||    ||||||||   |||||| |||||  ||||||||||||||||||| ||||||||| |||||||| ||||    
T  28704237 attagatttttatttggataattaatta---ttttaattaactgatatgaactcaatatgagtggatgtctggatgactcattaactgaataatgagaaa 28704333  T
Q  220 ccctaat 226  Q
    |||||||    
T  28704334 ccctaat 28704340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 106
Target Start/End: Original strand, 42359346 - 42359407
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagccaa 106  Q
    |||||| |||||||||| ||||||||| ||||||||| |||||||||||||| |||||||||    
T  42359346 ttaccagggaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttagccaa 42359407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 19674473 - 19674414
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||| ||||||||| |||||||||| ||||||||||||||||||| |||| |||||||    
T  19674473 ttaccagggaccaaaactcaaactcgctatatttgcaaggaccaaaagcatattttagcc 19674414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 29060882 - 29060941
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    ||||||||||||||||||||||||||| ||||||||| |||  ||||||||| |||||||    
T  29060882 ttaccaaggaccaaaattcaaactcgctatatttgcagggattaaaaacatattttagcc 29060941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 244
Target Start/End: Original strand, 4632062 - 4632189
Alignment:
Q  105 aattaagtaataaggct-attagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcatta 203  Q
    ||||||||||||||| | |||||||||||| || ||  |||||||||    |||||||||||||||||||| ||||||        |||||||| |||||    
T  4632062 aattaagtaataaggtttattagatttctacttagagtattaattaa----ttaattagtggatatggact-aatgag--------tggatggcccatta 4632148  T
Q  204 acggaataatgggaaaccctaatggtcatccaatataaaag 244  Q
    | |||||| || ||||| |||||||||||| ||||||||||    
T  4632149 atggaatattgagaaactctaatggtcatcaaatataaaag 4632189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 22204114 - 22204053
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagccaa 106  Q
    |||||| |||| ||||  ||||||||| ||||||||| |||||||||||||| |||||||||    
T  22204114 ttaccagggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttagccaa 22204053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 104
Target Start/End: Original strand, 5259171 - 5259210
Alignment:
Q  65 aactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    ||||||||||||||||| |||||||||||||| |||||||    
T  5259171 aactcgccatatttgcagggaccaaaaacatattttagcc 5259210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 9237129 - 9237179
Alignment:
Q  165 gatatggactcaatgagtggatgtctggatggctcattaacggaataatgg 215  Q
    ||||||||||| ||||||||||||||||||| |  |||||||| |||||||    
T  9237129 gatatggactctatgagtggatgtctggatgaccaattaacgggataatgg 9237179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 32699321 - 32699374
Alignment:
Q  52 ggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcca 105  Q
    |||||||||  ||||||||| |||||| || |||||||||||||| ||||||||    
T  32699321 ggaccaaaacccaaactcgctatatttacagggaccaaaaacatattttagcca 32699374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 3880503 - 3880555
Alignment:
Q  52 ggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||||||  ||||||||| ||||||||| | |||||||||||| |||||||    
T  3880503 ggaccaaaacccaaactcgctatatttgcaggaaccaaaaacatattttagcc 3880555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 169; Significance: 1e-90; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 31051231 - 31051435
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  31051231 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagttgatatggactcaatgagtggatgtccggatggcccattaa 31051330  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaagag 303  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||    
T  31051331 cggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatataccgtacacgacaatactctctcttctccccatctgaagag 31051430  T
Q  304 aactt 308  Q
    |||||    
T  31051431 aactt 31051435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 34739673 - 34739876
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  34739673 aattaagtaataaggctattagatttctaattggataaataattaaatatttaattagttgatatggactcaatgagtggatgtccggatggcccattaa 34739772  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    |||||||||||||||||||||||| |||||||||||||||||| | |||||| |||||||||||||||| |||||||||||||||||| |||||||||||    
T  34739773 cggaataatgggaaaccctaatggccatccaatataaaagaggctgtggtccccaatataccgtacacgacaaactctctcttctcccaatctgaagaga 34739872  T
Q  305 actt 308  Q
    ||||    
T  34739873 actt 34739876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 31057731 - 31057935
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| | ||||||    
T  31057731 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagttgatatggactcaatgagtggatgtccggatgacccattaa 31057830  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaagag 303  Q
    |||||||||||||||||||||||| ||| |||||||||||||| |||| ||| |||||||||||||||| ||| ||||||||||||||||||||||||||    
T  31057831 cggaataatgggaaaccctaatggccatacaatataaaagaggctatgatccccaatataccgtacacgacaatactctctcttctccccatctgaagag 31057930  T
Q  304 aactt 308  Q
    |||||    
T  31057931 aactt 31057935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 8093318 - 8093115
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||| | ||||||    
T  8093318 aattaagtaataaggctattagatttctaattggataattaattaaatgtttaattagttgatatggactcaatgagtggatgtccggatgacccattaa 8093219  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    ||||||||||||||||||||| | ||||| ||||||||||||| |||||||| |||||||||| |||||||||||||||| |||||||||||||||||||    
T  8093218 cggaataatgggaaaccctaacgatcatcaaatataaaagaggctatggtccccaatataccgaacacggcaaactctcttttctccccatctgaagaga 8093119  T
Q  305 actt 308  Q
    ||||    
T  8093118 actt 8093115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 44409687 - 44409891
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||| ||||||    
T  44409687 aattaggtaataaggctattaggtttctaattggataattaattaaatatttaattagttaatatggactcaatgagtggatgtccggatggcccattaa 44409786  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggc-aaactctctcttctccccatctgaagag 303  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||| ||  |||||| | ||||||||||||||||||||||||||||    
T  44409787 cggaataatgagaaaccctaatggccatccaatataaaagaggttatggtccccaatacactatacacgacaaaactctctcttctccccatctgaagag 44409886  T
Q  304 aactt 308  Q
    |||||    
T  44409887 aactt 44409891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 50305884 - 50306087
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| |||||||||||||  |||||||||||| ||||||| ||    
T  50305884 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatggactcaacatgagtggatgtccggatggccca 50305979  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||| |||||||||||||||||||||    
T  50305980 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccccaatacaccgtacacggcaaattctctcttctccccatctgaa 50306079  T
Q  301 gagaactt 308  Q
    ||||||||    
T  50306080 gagaactt 50306087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 25387975 - 25387773
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcatt 202  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| |||||||||| |||||||||||||| ||||||| ||||    
T  25387975 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatggacttaatgagtggatgtccggatggcccatt 25387880  T
Q  203 aacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaag 301  Q
    || ||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  25387879 aatggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctgaag 25387780  T
Q  302 agaactt 308  Q
    |||||||    
T  25387779 agaactt 25387773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 25382008 - 25381804
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| |||||||||||||  |||||||||||| ||||||| ||    
T  25382008 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatggactcaacatgagtggatgtccggatggccca 25381913  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctga 299  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||    
T  25381912 ttaatggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatacaccgtacacggcaatactctctcttctccccatctga 25381813  T
Q  300 agagaactt 308  Q
    |||||||||    
T  25381812 agagaactt 25381804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 1077931 - 1078135
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    |||||||||||||| ||| ||||||||||| || |||||||||||||    |||||||||| |||||||||||||  |||||||||||| ||||| | ||    
T  1077931 aattaagtaataagactaattagatttctattttggataattaatta----tttaattagttgatatggactcaacatgagtggatgtccggatgaccca 1078026  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctga 299  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||| ||||||||    
T  1078027 ttaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatacaccgtacacggcaatactctctcttctcaccatctga 1078126  T
Q  300 agagaactt 308  Q
    |||||||||    
T  1078127 agagaactt 1078135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 38152430 - 38152233
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||     |||||| ||||| | ||||||    
T  38152430 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagttgatatgaactcaat-----gatgtccggatgacccattaa 38152336  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    ||||||||||||||| |||||||  |||||||||||||||||| |||||| | ||||| |||||||||| |||||||  |||||||||||||| |||| |    
T  38152335 cggaataatgggaaa-cctaatgaccatccaatataaaagaggctatggttcccaatacaccgtacacgacaaactcgttcttctccccatctaaagaaa 38152237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 27954848 - 27955050
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactca--atgagtggatgtctggatggctcatt 202  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||  |||||||||||| |||||||||||||    
T  27954848 aattaagtaataaggctattagatttctaatttgataattaattaaatatttaattagttgatatggactcaatatgagtggatgtatggatggctcatt 27954947  T
Q  203 aacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaag 301  Q
    |  |||||||||||||| | ||||||||||||||||||||||| |||||| ||| ||||| ||   ||||| ||| ||  ||||||||||||||||| ||    
T  27954948 agtggaataatgggaaatcataatggtcatccaatataaaagatgttatgatccccaatacac---acacgacaatacattctcttctccccatctg-ag 27955043  T
Q  302 agaactt 308  Q
    |||||||    
T  27955044 agaactt 27955050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 140 - 308
Target Start/End: Complemental strand, 24927197 - 24927030
Alignment:
Q  140 taattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaacggaataatgggaaaccctaatggtcatccaatat 239  Q
    ||||||||||| || ||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24927197 taattaattaattaattaattaatggatatggactcaatg-gtggatgtctggatggcccattaacggaataatgggaaaccctaatggtcatccaatat 24927099  T
Q  240 aaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagagaactt 308  Q
    |||||||| |||||| | |||||  || |||  || |||||||||||||||||||||||||||||||||    
T  24927098 aaaagaggctatggttcccaatactccatacgtggaaaactctctcttctccccatctgaagagaactt 24927030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 230
Target Start/End: Complemental strand, 12184069 - 12183959
Alignment:
Q  122 attagatttctaattggataattaattaaatatttaattagtggatatggactca--atgagtggatgtctggatggctcattaacggaataatgggaaa 219  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||  |||||| |||||| |||||||  ||||||||||||||| ||||    
T  12184069 attagatttctatttggataattaattaaatatttaattagttgatatggactcaatatgagtagatgtccggatggccaattaacggaataatgagaaa 12183970  T
Q  220 ccctaatggtc 230  Q
    |||||||||||    
T  12183969 ccctaatggtc 12183959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 24964177 - 24963978
Alignment:
Q  105 aattaagtaataaggct-attagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcatta 203  Q
    ||||||||||||| ||| || ||||||||| || ||  |||||||||    ||||||| |||||||| |||||||| ||||||||||| ||| | |||||    
T  24964177 aattaagtaataaagcttataagatttctatttagaatattaattaa----ttaattaatggatatgaactcaatgggtggatgtctgaatgacccatta 24964082  T
Q  204 acggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagag 303  Q
    |||||| ||| |||||||||||| |||||| ||||||||||| | |||| ||  ||| | ||||||   |||||||||||||||||||||||||||||||    
T  24964081 acggaaaaat-ggaaaccctaattgtcatctaatataaaagatgctatgatcaccaagacaccgtatgtggcaaactctctcttctccccatctgaagag 24963983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 105 - 295
Target Start/End: Complemental strand, 33458382 - 33458192
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactca-atgagtggatgtctggatggctcatta 203  Q
    ||||||||||||| |||||||||||||||| | |||||||| |||||||||||||||   |||||||||| |  |||||||||||| |||||   |||||    
T  33458382 aattaagtaataatgctattagatttctaactagataattacttaaatatttaattaactgatatggactaatgtgagtggatgtccggatgatccatta 33458283  T
Q  204 acggaataatgggaaaccctaatggtcatccaata-taaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccat 295  Q
    | | ||||| | ||||||||||||  |||  |||| || |||||| |||| |  |||||| ||   ||||||||||||||||||||| |||||    
T  33458282 atgaaataacgagaaaccctaatgaccat--aatactataagaggctatgattttcaatacactagacacggcaaactctctcttcttcccat 33458192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 50164461 - 50164403
Alignment:
Q  46 taccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||| |||| |||||||    
T  50164461 taccaaggaccaaaactcaaactcgccatatttgcagggaccaaaagcatattttagcc 50164403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 39162883 - 39162822
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgcca-tatttgcaaggaccaaaaacataatttagcca 105  Q
    ||||||||||||||||| ||||||||||| |||||||| ||||||||| |||||||||||||    
T  39162883 ttaccaaggaccaaaatccaaactcgccattatttgcagggaccaaaagcataatttagcca 39162822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 105 - 195
Target Start/End: Complemental strand, 25275519 - 25275429
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactca--atgagtggatgtctggatg 195  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| ||||||||||||  ||||||||||||| |||||    
T  25275519 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatggactcaacatgagtggatgtccggatg 25275429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 94
Target Start/End: Complemental strand, 28198482 - 28198440
Alignment:
Q  52 ggaccaaaattcaaactcgccatatttgcaaggaccaaaaaca 94  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  28198482 ggaccaaaattcaaactcgccatatttgcaaggaacaaaaaca 28198440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 37396840 - 37396905
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagccaattaa 110  Q
    |||||||||||||||| ||||| |||| ||||||||| ||||||||| |||| |||||||| ||||    
T  37396840 ttaccaaggaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttagccatttaa 37396905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 46075050 - 46075115
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagccaattaa 110  Q
    |||||| |||||||||  ||||||||| ||||||||| ||| |||||||||| |||||||||||||    
T  46075050 ttaccagggaccaaaacccaaactcgctatatttgcagggatcaaaaacatattttagccaattaa 46075115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 24609971 - 24609919
Alignment:
Q  52 ggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||||||  ||||||||||||||||||| |||||||||||||| |||||||    
T  24609971 ggaccaaaacccaaactcgccatatttgcagggaccaaaaacatattttagcc 24609919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 24611117 - 24611176
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||| ||||||||| ||||||||| ||||||| || |||||||||||||| |||||||    
T  24611117 ttaccagggaccaaaactcaaactcgtcatatttacagggaccaaaaacatattttagcc 24611176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 27262967 - 27262908
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||| |||||||||  ||||||||| ||||||||| |||||||||||||| |||||||    
T  27262967 ttaccagggaccaaaacacaaactcgctatatttgcagggaccaaaaacatattttagcc 27262908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 35911888 - 35911947
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    ||||||||||||||||| |||| |||| ||||||||| ||||||||| |||| |||||||    
T  35911888 ttaccaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 35911947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 9774096 - 9774040
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataattta 101  Q
    |||||| ||||||||| |||||||||  ||||||||| |||||||||||||| ||||    
T  9774096 ttaccagggaccaaaactcaaactcgttatatttgcagggaccaaaaacatatttta 9774040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 24427369 - 24427433
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagccaatta 109  Q
    |||||| |||| |||| |||||||||| ||||||| | |||||||||||||| ||||||| ||||    
T  24427369 ttaccagggactaaaactcaaactcgctatatttgtagggaccaaaaacatattttagcccatta 24427433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 20723688 - 20723747
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||| |||| |||| ||||| |||| ||||||||| |||||||||||||| |||||||    
T  20723688 ttaccagggactaaaactcaaattcgctatatttgcagggaccaaaaacatattttagcc 20723747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 26863919 - 26863860
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||| ||||||||| ||||| |||| ||||||||| |||||||||||| | |||||||    
T  26863919 ttaccagggaccaaaactcaaattcgctatatttgcagggaccaaaaacacattttagcc 26863860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 39163024 - 39163083
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||| |||||||||  ||| ||||||||||||||| ||||||||| |||| |||||||    
T  39163024 ttaccagggaccaaaacccaacctcgccatatttgcagggaccaaaagcatattttagcc 39163083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 23469988 - 23470029
Alignment:
Q  64 aaactcgccatatttgcaaggaccaaaaacataatttagcca 105  Q
    |||||||| ||||||||| |||||||||||||| ||||||||    
T  23469988 aaactcgctatatttgcagggaccaaaaacatattttagcca 23470029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 45979506 - 45979555
Alignment:
Q  55 ccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||| ||||| |||| ||||||||| |||||||||||||| |||||||    
T  45979506 ccaaaactcaaattcgctatatttgcagggaccaaaaacatattttagcc 45979555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 104
Target Start/End: Original strand, 48594066 - 48594107
Alignment:
Q  63 caaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||||||||||||| || |||||||||||||| |||||||    
T  48594066 caaactcgccatatttacagggaccaaaaacatattttagcc 48594107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 104
Target Start/End: Original strand, 48598677 - 48598718
Alignment:
Q  63 caaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||||||||||||| || |||||||||||||| |||||||    
T  48598677 caaactcgccatatttacagggaccaaaaacatattttagcc 48598718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 20722531 - 20722467
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagccaatta 109  Q
    |||||| |||||||||  |||| |||| ||||||||| ||||||||| || | ||||||||||||    
T  20722531 ttaccagggaccaaaacccaaattcgctatatttgcagggaccaaaagcacattttagccaatta 20722467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 27396069 - 27396029
Alignment:
Q  184 gatgtctggatggctcattaacggaataatgggaaacccta 224  Q
    |||||||||||| |||| ||||||||||||| |||||||||    
T  27396069 gatgtctggatgactcaataacggaataatgagaaacccta 27396029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 48588968 - 48589020
Alignment:
Q  52 ggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||||||  ||||||| |||||||| || |||||||||||||| |||||||    
T  48588968 ggaccaaaacccaaactcaccatatttacagggaccaaaaacatattttagcc 48589020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 173362 - 173159
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    |||||    
T  173362 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagttgatatggactcaatgagtggatgtccggatgttctattaa 173263  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||    
T  173262 cggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccccaatacaccgtatacggcaaactctctcttctccccatctgaagaga 173163  T
Q  305 actt 308  Q
    ||||    
T  173162 actt 173159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 1660 - 1463
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |           
T  1660 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagttgatatggactcaatgagtggatgtccggatgac------c 1567  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    ||||||||||| ||| |||||||| |||||||||||||||||| |||||||| ||||||| | ||||| |||||||||||||||||||||||||||||||    
T  1566 cggaataatggaaaatcctaatggccatccaatataaaagaggctatggtccccaatatatcatacaccgcaaactctctcttctccccatctgaagaga 1467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 6209 - 6413
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| |||||||||||||  |||||||||||| ||||||| ||    
T  6209 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatggactcaacatgagtggatgtccggatggccca 6304  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctga 299  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||    
T  6305 ttaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatacaccgtacacggcaatactctctcttctccccatctga 6404  T
Q  300 agagaactt 308  Q
    |||||||||    
T  6405 agagaactt 6413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 105 - 308
Target Start/End: Original strand, 12082 - 12286
Alignment:
Q  105 aattaagtaataaggcta-ttagatttctaatt-ggataattaattaaatatttaattagtggatatggactcaa--tgagtggatgtctggatggctca 200  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||    |||||||||| |||||||||||||  |||||||||||| ||||||| ||    
T  12082 aattaagtaataaggctaattagatttctattttggataattaatta----tttaattagttgatatggactcaacatgagtggatgtccggatggccca 12177  T
Q  201 ttaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctga 299  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||    
T  12178 ttaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatacaccgtacacggcaatactctctcttctccccatctga 12277  T
Q  300 agagaactt 308  Q
    |||||||||    
T  12278 agagaactt 12286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1114 (Bit Score: 124; Significance: 9e-64; HSPs: 1)
Name: scaffold1114
Description:

Target: scaffold1114; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 105 - 304
Target Start/End: Original strand, 750 - 949
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    ||||||||||||||||||||||||||  |||  ||||||| ||||||||||||||||   |||||| |||||||||||| |||||| |||| | ||||||    
T  750 aattaagtaataaggctattagatttaaaatcagataattgattaaatatttaattaactgatatgtactcaatgagtgaatgtctagatgacccattaa 849  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    | ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || ||||||| ||||||||||||||||||||||||||||||    
T  850 cagaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccccaatacactgtacacgacaaactctctcttctccccatctgaagaga 949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 105 - 262
Target Start/End: Original strand, 13960 - 14117
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||| | ||||||    
T  13960 aattaagtaataattctattagatttgtaattggataattaattaaatatttaattagttgatatggattcaatgagtggatgtccggatgacccattaa 14059  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaata 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14060 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtccccaata 14117  T

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Target: scaffold0363 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 1071 - 888
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactcaatgagtggatgtctggatggctcattaa 204  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||  ||||| | ||||||    
T  1071 aattaagtaataaggctattagatttctaattggataattaattgaatatttaattagttgatatgggctcaatgagtggatgttcggatgtcccattaa 972  T
Q  205 cggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtacacggcaaactctctcttctccccatctgaagaga 304  Q
    || ||||||||||||                    |||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  971 cgaaataatgggaaa--------------------aaaagaggctatggtccccaatacaccgtacacggcaaactctctcttctccccatctgaagaga 892  T

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Target: scaffold0185 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 105 - 271
Target Start/End: Original strand, 5654 - 5821
Alignment:
Q  105 aattaagtaataaggctattagatttctaattggataattaattaaatatttaattagtggatatggactca--atgagtggatgtctggatggctcatt 202  Q
    |||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||  ||||||||||||  ||||| | ||||    
T  5654 aattaagtaatatgactattagatttctaattcgataattaattaaatatttaattagttgatatggactcaatatgagtggatgttcggatgacccatt 5753  T
Q  203 aacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcctcaatataccgtaca 271  Q
    ||| ||||||||||||| ||||| || ||| |||||||||||||| |||||| | ||||| | ||||||    
T  5754 aacagaataatgggaaa-cctaacggccattcaatataaaagaggctatggttcccaatacatcgtaca 5821  T

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Target: scaffold0085 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 308
Target Start/End: Original strand, 38152 - 38317
Alignment:
Q  144 taattaaatatttaattagtggatatggactcaatgag-tggatgtctggatggctcattaacggaataatgggaaaccctaatggtcatc-caatataa 241  Q
    ||||||| |||||||||| | |||||||||| |||  | ||||||||| |||| |  |||||||||||||| | ||||||||||| ||||| || |||      
T  38152 taattaattatttaattaattgatatggacttaatatggtggatgtctagatgaccgattaacggaataatagaaaaccctaatgatcatcacactat-- 38249  T
Q  242 aagaggttatggtcctcaatataccgtacacggcaa-actctctcttctccccatctgaagagaactt 308  Q
    ||||||||||||||  ||||| |||||||| |  || || |||| |||| ||||||||||||||||||    
T  38250 aagaggttatggtctccaatacaccgtacatgataatacactctattcttcccatctgaagagaactt 38317  T

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Target: scaffold0095 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 42762 - 42813
Alignment:
Q  52 ggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagc 103  Q
    ||||||||| |||||||||||||||||||||||||||||| |||| ||||||    
T  42762 ggaccaaaactcaaactcgccatatttgcaaggaccaaaagcatattttagc 42813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 10374 - 10309
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagccaattaa 110  Q
    |||||||||||||||| ||||| |||| ||||||||| ||||||||| |||| |||||||| ||||    
T  10374 ttaccaaggaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttagccatttaa 10309  T

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Target: scaffold0516 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 1142 - 1196
Alignment:
Q  52 ggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagccaa 106  Q
    ||||||||| ||||||||||||||||||||  ||||||||| ||| |||||||||    
T  1142 ggaccaaaactcaaactcgccatatttgcagagaccaaaaatatattttagccaa 1196  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 96
Target Start/End: Complemental strand, 344996 - 344945
Alignment:
Q  45 ttaccaaggaccaaaattcaaactcgccatatttgcaaggaccaaaaacata 96  Q
    |||||| |||||||||  ||||||||||||||||||| ||||||||| ||||    
T  344996 ttaccagggaccaaaacccaaactcgccatatttgcagggaccaaaatcata 344945  T

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Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 345904 - 345956
Alignment:
Q  52 ggaccaaaattcaaactcgccatatttgcaaggaccaaaaacataatttagcc 104  Q
    |||||||||  |||| |||| ||||||||| |||||||||||||| |||||||    
T  345904 ggaccaaaacccaaattcgctatatttgcagggaccaaaaacatattttagcc 345956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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