View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4212_low_1 (Length: 838)

Name: NF4212_low_1
Description: NF4212
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4212_low_1
NF4212_low_1
[»] chr4 (18 HSPs)
chr4 (3-798)||(4956183-4956977)
chr4 (672-752)||(37781905-37781985)
chr4 (692-783)||(1983294-1983385)
chr4 (661-752)||(8114701-8114791)
chr4 (663-742)||(18912328-18912407)
chr4 (692-792)||(34670659-34670756)
chr4 (692-792)||(3796513-3796613)
chr4 (673-782)||(39774280-39774389)
chr4 (692-783)||(36315224-36315314)
chr4 (692-783)||(36329433-36329523)
chr4 (693-751)||(873513-873571)
chr4 (692-792)||(10047382-10047482)
chr4 (696-792)||(31985633-31985727)
chr4 (661-783)||(5112249-5112371)
chr4 (692-753)||(16623287-16623348)
chr4 (724-782)||(24333822-24333880)
chr4 (695-792)||(39245997-39246094)
chr4 (673-763)||(39593761-39593850)
[»] chr3 (24 HSPs)
chr3 (661-796)||(29100158-29100294)
chr3 (661-792)||(4386880-4387011)
chr3 (692-792)||(8370471-8370570)
chr3 (693-796)||(1736290-1736393)
chr3 (513-593)||(21156703-21156783)
chr3 (692-792)||(21711226-21711325)
chr3 (696-792)||(26928590-26928684)
chr3 (696-792)||(27452961-27453056)
chr3 (696-792)||(27974941-27975036)
chr3 (724-792)||(33386682-33386750)
chr3 (696-775)||(6794702-6794780)
chr3 (696-781)||(16264364-16264448)
chr3 (692-792)||(18552867-18552967)
chr3 (692-792)||(30709774-30709874)
chr3 (696-781)||(32143335-32143419)
chr3 (692-792)||(36029096-36029196)
chr3 (692-792)||(40592766-40592866)
chr3 (692-796)||(21156428-21156532)
chr3 (724-792)||(27986462-27986530)
chr3 (515-598)||(29196642-29196725)
chr3 (693-735)||(5366309-5366351)
chr3 (692-781)||(48438228-48438317)
chr3 (692-753)||(5797182-5797242)
chr3 (692-753)||(21353604-21353665)
[»] chr6 (7 HSPs)
chr6 (661-796)||(33721522-33721657)
chr6 (692-792)||(31086467-31086567)
chr6 (695-753)||(1115101-1115159)
chr6 (696-792)||(5757477-5757572)
chr6 (693-783)||(21801339-21801429)
chr6 (692-781)||(31076935-31077024)
chr6 (692-792)||(10077159-10077259)
[»] chr7 (10 HSPs)
chr7 (661-796)||(28617188-28617323)
chr7 (694-782)||(5817266-5817353)
chr7 (693-792)||(49091664-49091763)
chr7 (696-792)||(21983287-21983384)
chr7 (692-792)||(29159806-29159906)
chr7 (696-751)||(21646050-21646104)
chr7 (696-754)||(18413680-18413737)
chr7 (696-754)||(44848683-44848740)
chr7 (692-792)||(4796661-4796761)
chr7 (692-792)||(46516304-46516404)
[»] scaffold0076 (1 HSPs)
scaffold0076 (661-796)||(15951-16086)
[»] chr5 (17 HSPs)
chr5 (661-798)||(2630228-2630365)
chr5 (693-795)||(12084171-12084272)
chr5 (513-593)||(5611416-5611496)
chr5 (696-792)||(9353331-9353426)
chr5 (696-792)||(36932349-36932444)
chr5 (690-792)||(3880302-3880404)
chr5 (690-792)||(11916964-11917066)
chr5 (692-792)||(10281754-10281854)
chr5 (692-796)||(5611141-5611245)
chr5 (696-792)||(15464535-15464630)
chr5 (672-792)||(33030914-33031034)
chr5 (692-754)||(11181826-11181888)
chr5 (694-752)||(28537669-28537727)
chr5 (696-754)||(38192214-38192271)
chr5 (696-754)||(38219439-38219496)
chr5 (661-754)||(6741893-6741986)
chr5 (692-765)||(7160897-7160970)
[»] chr2 (29 HSPs)
chr2 (672-796)||(2869667-2869791)
chr2 (692-798)||(8040057-8040165)
chr2 (692-792)||(8390144-8390244)
chr2 (672-775)||(27149268-27149371)
chr2 (692-792)||(10707246-10707346)
chr2 (692-792)||(20522223-20522323)
chr2 (690-792)||(21629947-21630048)
chr2 (692-792)||(10445438-10445538)
chr2 (692-792)||(13569331-13569431)
chr2 (692-792)||(17865206-17865306)
chr2 (696-792)||(28259176-28259271)
chr2 (695-774)||(15903886-15903965)
chr2 (696-783)||(23078469-23078555)
chr2 (692-798)||(3277999-3278104)
chr2 (661-751)||(18674364-18674454)
chr2 (661-771)||(28770737-28770847)
chr2 (692-781)||(39482945-39483034)
chr2 (691-792)||(2838023-2838124)
chr2 (692-796)||(16388464-16388569)
chr2 (692-792)||(33528615-33528715)
chr2 (696-792)||(25398499-25398593)
chr2 (724-792)||(42039695-42039763)
chr2 (696-754)||(3491791-3491848)
chr2 (693-739)||(5077787-5077833)
chr2 (696-754)||(25403674-25403731)
chr2 (696-754)||(25407663-25407720)
chr2 (692-754)||(39532933-39532995)
chr2 (692-792)||(34388861-34388961)
chr2 (692-792)||(34682328-34682428)
[»] chr8 (16 HSPs)
chr8 (672-780)||(9054811-9054919)
chr8 (696-792)||(7412344-7412439)
chr8 (690-754)||(11771982-11772046)
chr8 (696-781)||(19175753-19175837)
chr8 (692-792)||(6813686-6813786)
chr8 (693-798)||(8863619-8863725)
chr8 (692-792)||(5702477-5702577)
chr8 (696-781)||(31071228-31071312)
chr8 (692-795)||(6127221-6127324)
chr8 (724-792)||(26403256-26403324)
chr8 (696-754)||(1261953-1262010)
chr8 (696-754)||(4456069-4456126)
chr8 (692-754)||(33079724-33079786)
chr8 (692-753)||(3051162-3051223)
chr8 (727-792)||(9765848-9765913)
chr8 (692-792)||(23799571-23799671)
[»] chr1 (21 HSPs)
chr1 (672-749)||(11032294-11032371)
chr1 (692-782)||(27104366-27104456)
chr1 (696-765)||(13604622-13604690)
chr1 (661-753)||(918443-918535)
chr1 (694-754)||(2210498-2210558)
chr1 (696-792)||(19358842-19358936)
chr1 (696-792)||(19361431-19361525)
chr1 (696-792)||(19380071-19380165)
chr1 (672-754)||(3019771-3019853)
chr1 (692-792)||(19072931-19073031)
chr1 (692-792)||(19120821-19120921)
chr1 (661-774)||(32736959-32737072)
chr1 (692-792)||(47703930-47704030)
chr1 (696-792)||(26644896-26644991)
chr1 (693-749)||(48382476-48382532)
chr1 (696-783)||(3281720-3281806)
chr1 (692-782)||(16124510-16124600)
chr1 (692-801)||(21149250-21149360)
chr1 (696-754)||(24202768-24202825)
chr1 (661-735)||(35109500-35109574)
chr1 (707-792)||(37069773-37069858)
[»] scaffold0002 (1 HSPs)
scaffold0002 (664-796)||(14682-14813)
[»] scaffold0006 (1 HSPs)
scaffold0006 (696-765)||(133279-133347)
[»] scaffold0140 (1 HSPs)
scaffold0140 (696-792)||(8418-8513)
[»] scaffold0036 (1 HSPs)
scaffold0036 (692-792)||(85686-85785)
[»] scaffold0016 (1 HSPs)
scaffold0016 (661-752)||(102457-102548)
[»] scaffold0148 (1 HSPs)
scaffold0148 (690-783)||(10741-10834)
[»] scaffold0087 (1 HSPs)
scaffold0087 (696-792)||(43960-44055)
[»] scaffold0188 (2 HSPs)
scaffold0188 (696-754)||(17951-18008)
scaffold0188 (696-754)||(24044-24101)


Alignment Details
Target: chr4 (Bit Score: 556; Significance: 0; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 556; E-Value: 0
Query Start/End: Original strand, 3 - 798
Target Start/End: Complemental strand, 4956977 - 4956183
Alignment:
Q  3 gtaaatcactaataccaattaccaagcacgaggtt---gtaagtgcataaagtgactttccttagcaagaatacataatcaagatcttgaggattgggga 99  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4956977 gtaaatcactaataccaattaccaagcacgaggtttttgtaagtgcataaagtgactttccttagcaagaatacataatcaagatcttgaggattgggga 4956878  T
Q  100 aaactagtggatgatgcttcatattagcataagaccaaccggtaaaaactcttcgacatctgattagaacaagaccaaccactacaaactcttcgccatc 199  Q
    |||||||||||| ||||||||||||||||||||| ||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  4956877 aaactagtggataatgcttcatattagcataagagcaatcggtaaaaactcttcaacatctaattagaacaagaccaaccactacaaactcttcgccatc 4956778  T
Q  200 caacattgtctatatatccaaataattacggcaacaccactaaggacatcttggcgctcctattttaagctctattcggaaggatttcttttatcactat 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  4956777 caacattgtctatatatccaaataattacggcaacaccactaaggacatcttggcgctcctattttaagctctgttcggaaggatttcttttatcactac 4956678  T
Q  300 tatcttcttagaaaacaaataaagttatcattttatcaatctttctcatatactttgttgcattttaatattgtgcatagtggtgttcatat-ccgtggc 398  Q
    | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  4956677 tgtcctcttagaaaacaaataaagttatcattttatcaatctttctcatatactttgttgcattttaatattgtgcatagtggtgttcatataccgtgcc 4956578  T
Q  399 atgaaggaaagacatcgtgacacggttacagataaaatgtagtattatacttgtgtactacttgcaatagtggcacgatgggtgtcaattgtggcataat 498  Q
     |||||||||||||||||| ||||||||| |||||||||||||||| |||| |||||| || |||||||||||||| ||||||||||||||||||| |||    
T  4956577 ttgaaggaaagacatcgtggcacggttacggataaaatgtagtattgtactcgtgtacaac-tgcaatagtggcacaatgggtgtcaattgtggcacaat 4956479  T
Q  499 ttctcttgattttggacttcattcttcattttttgagagatcttcaagggagagaaatttggaaaactaaaggaggaaattttagagttaagtgtctttg 598  Q
    ||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  4956478 ttctcttgattctagacttcattcttcattttttgagagatctttaagggagagaaatttggaaaactaaaggaggaaactttagagttaagtgtttttg 4956379  T
Q  599 ttgaga---ttannnnnnnnggattcattgtgagtgtacccgacttgaaaatgggtagaaattataattagggttcgttctttgtgtgttttttaactaa 695  Q
    ||||||   ||         |||||||||||||||||    ||||||||| |||||||||||||||||||||||| ||||||| || |||||||| ||||    
T  4956378 ttgagattttttttttttttggattcattgtgagtgtgggtgacttgaaattgggtagaaattataattagggtttgttctttatgagttttttagctaa 4956279  T
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaatatt 795  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| | |       | |||||||||||||||||||||||||||||||||||    
T  4956278 tttcttgtaacctctttttatcattcttatcatagtggattggagagttgct-tat------aattaggttattttggactgaactggataaacaatatt 4956186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 672 - 752
Target Start/End: Complemental strand, 37781985 - 37781905
Alignment:
Q  672 gttctttgtgtgttttttaactaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctc 752  Q
    |||||||||| |||||| | ||||||||||||||||||||| ||||| |||||| |||||||||||||||||| |||||||    
T  37781985 gttctttgtgagtttttaagctaatttcttgtaacctctttgtatcacttttattatagtggattggagagttactctctc 37781905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 692 - 783
Target Start/End: Original strand, 1983294 - 1983385
Alignment:
Q  692 ctaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactgg 783  Q
    |||||||||||||||| |||| ||||| ||| ||| ||||||||||||||| |||| |||||| |||||||||| || |||||| |||||||    
T  1983294 ctaatttcttgtaacccctttgtatcactttgatcctagtggattggagagctgctatctcccccatagtaggtcatattggaccgaactgg 1983385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 661 - 752
Target Start/End: Original strand, 8114701 - 8114791
Alignment:
Q  661 aattagggttcgttctttgtgtgttttttaactaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctc 752  Q
    |||||||||| |||||||||| | || | || | |||||||||||||| ||| ||||||| |||||||||||||||||||||||| ||||||    
T  8114701 aattagggtttgttctttgtgagattat-aagtgatttcttgtaacctatttatatcattcttatcatagtggattggagagttgttctctc 8114791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 663 - 742
Target Start/End: Original strand, 18912328 - 18912407
Alignment:
Q  663 ttagggttcgttctttgtgtgttttttaactaatttcttgtaacctctttttatcatttttatcatagtggattggagag 742  Q
    |||||||| |||||||||| |||| | ||||||||||||||| ||| ||| ||||| | |||||||||||||||||||||    
T  18912328 ttagggtttgttctttgtgagtttgtaaactaatttcttgtatcctttttgtatcactcttatcatagtggattggagag 18912407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 692 - 792
Target Start/End: Original strand, 34670659 - 34670756
Alignment:
Q  692 ctaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaa 791  Q
    ||||||||||||||||||||| || |    ||||||||||||||  ||||| |||| |||||  |||||||||| ||||||||| |||||||||||||||    
T  34670659 ctaatttcttgtaacctctttgtacc---cttatcatagtggatcagagagctgctatctccttcatagtaggtcattttggaccgaactggataaacaa 34670755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 692 - 792
Target Start/End: Original strand, 3796513 - 3796613
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaaca 790  Q
    |||||||||||||| ||||||| || || ||| ||||||||||||| ||||||||||||||||| |||| ||||| || |||||| ||||||| | ||||    
T  3796513 ctaatttcttgtaa-ctcttttgtaacactttcatcatagtggattagagagttgctctctcccccatattaggtcatattggacggaactgggtcaaca 3796611  T
Q  791 at 792  Q
    ||    
T  3796612 at 3796613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 673 - 782
Target Start/End: Original strand, 39774280 - 39774389
Alignment:
Q  673 ttctttgtgtgttttttaactaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttg 772  Q
    ||||||||| | |||| | ||||||||||||||||| ||| ||||| ||| ||  ||||||||||||||| |||||| |||| || ||||||| || |||    
T  39774280 ttctttgtgagcttttaagctaatttcttgtaacctatttgtatcactttcattttagtggattggagagctgctctatcccccagagtaggtcatattg 39774379  T
Q  773 gactgaactg 782  Q
    ||| ||||||    
T  39774380 gaccgaactg 39774389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 692 - 783
Target Start/End: Original strand, 36315224 - 36315314
Alignment:
Q  692 ctaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactgg 783  Q
    ||||||||||||||| ||||| || || ||| ||||||||||||||||||| ||||||||||| || | ||||| || |||||| |||||||    
T  36315224 ctaatttcttgtaac-tctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgg 36315314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 692 - 783
Target Start/End: Original strand, 36329433 - 36329523
Alignment:
Q  692 ctaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactgg 783  Q
    ||||||||||||||| ||||| || || ||| ||||||||||||||||||| ||||||||||| || | ||||| || |||||| |||||||    
T  36329433 ctaatttcttgtaac-tctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgg 36329523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 693 - 751
Target Start/End: Original strand, 873513 - 873571
Alignment:
Q  693 taatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctct 751  Q
    |||||||||||||||| ||  ||||||| | |||||||||||| |||||||||||||||    
T  873513 taatttcttgtaacctattggtatcattctaatcatagtggatcggagagttgctctct 873571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 792
Target Start/End: Complemental strand, 10047482 - 10047382
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaaca 790  Q
    ||||||||||||||| |||||| || || ||| ||||||||||||||||| | ||||||||||| || | ||||| || |||||| ||||||| | ||||    
T  10047482 ctaatttcttgtaac-tcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaaca 10047384  T
Q  791 at 792  Q
    ||    
T  10047383 at 10047382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 696 - 792
Target Start/End: Original strand, 31985633 - 31985727
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaat 792  Q
    |||||||||||| |||| || || ||| ||||||||||||||||||| ||||||||||| || | ||||| || |||||| ||||||| | ||||||    
T  31985633 tttcttgtaacc-ctttgtaacactttcatcatagtggattggagagctgctctctccc-cagattaggtcatattggaccgaactgggtcaacaat 31985727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 661 - 783
Target Start/End: Complemental strand, 5112371 - 5112249
Alignment:
Q  661 aattagggttcgttctttgtgtgttttttaactaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatag 760  Q
    |||||||  ||||| ||| || |||||| | ||||||||||||||||  ||| || || ||| ||  ||||||||||||||| ||||||| ||| || ||    
T  5112371 aattaggtctcgttttttatgagtttttaagctaatttcttgtaacccatttgtaacactttcatattagtggattggagagctgctctcacccccaaag 5112272  T
Q  761 taggttattttggactgaactgg 783  Q
    ||| | || |||||| |||||||    
T  5112271 tagatcatattggaccgaactgg 5112249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 692 - 753
Target Start/End: Original strand, 16623287 - 16623348
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcc 753  Q
    |||||||||||||| ||||||| || || ||| ||||||||||||||||||| ||||||||||    
T  16623287 ctaatttcttgtaa-ctcttttgtaacactttcatcatagtggattggagagctgctctctcc 16623348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 724 - 782
Target Start/End: Complemental strand, 24333880 - 24333822
Alignment:
Q  724 atcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactg 782  Q
    ||||||||||||||||||| ||||||||||| || | ||||| || |||||| ||||||    
T  24333880 atcatagtggattggagagctgctctctcccccaaattaggtcatattggaccgaactg 24333822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 695 - 792
Target Start/End: Complemental strand, 39246094 - 39245997
Alignment:
Q  695 atttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaat 792  Q
    |||||||||||| |||||| || || ||| ||||||||||||||||| | ||||||||||| || | ||||| || |||||| ||||||| | ||||||    
T  39246094 atttcttgtaac-tcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaat 39245997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 673 - 763
Target Start/End: Complemental strand, 39593850 - 39593761
Alignment:
Q  673 ttctttgtgtgttttttaactaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtag 763  Q
    ||||||||| |||| | ||||||||||||||||| | ||| ||||| | ||||||||||| | ||||||| | ||||||||| || |||||    
T  39593850 ttctttgtgagtttgtaaactaatttcttgtaacttatttgtatcactcttatcatagtgaagtggagagat-ctctctcccccagagtag 39593761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 4e-28; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 661 - 796
Target Start/End: Complemental strand, 29100294 - 29100158
Alignment:
Q  661 aattagggttcgttctttgtgtgttttttaactaatttcttgtaacctctttttatcatt-tttatcatagtggattggagagttgctctctcccacata 759  Q
    |||||||||| |||||||||| |||||| | |||||||||| |||||||||| ||||| | |||||||||||||| ||||||| |||||||| ||  |||    
T  29100294 aattagggtttgttctttgtgagtttttaagctaatttcttataacctctttgtatcactctttatcatagtggaatggagagctgctctcttccctata 29100195  T
Q  760 gtaggttattttggactgaactggataaacaatattg 796  Q
    || ||| ||||||||| ||||||| ||||||||||||    
T  29100194 gtgggtaattttggaccgaactgggtaaacaatattg 29100158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 661 - 792
Target Start/End: Original strand, 4386880 - 4387011
Alignment:
Q  661 aattagggttcgttctttgtgtgttttttaactaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatag 760  Q
    ||||||| || |||||||||| | |||| | ||||||||||||||||  ||| ||||| ||||||| || |||||||||||| ||||||||||| || ||    
T  4386880 aattaggttttgttctttgtgagcttttaagctaatttcttgtaacccatttgtatcacttttatcttattggattggagagctgctctctcccccagag 4386979  T
Q  761 taggttattttggactgaactggataaacaat 792  Q
    ||||| ||  || ||| |||||| ||||||||    
T  4386980 taggtcatactgaactaaactgggtaaacaat 4387011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 692 - 792
Target Start/End: Original strand, 8370471 - 8370570
Alignment:
Q  692 ctaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaa 791  Q
    ||||||||||||||| ||||| || || ||| ||||||||||||||||||| ||||||||||| || | ||||| || |||||| ||||||| | |||||    
T  8370471 ctaatttcttgtaac-tctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaa 8370569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 693 - 796
Target Start/End: Original strand, 1736290 - 1736393
Alignment:
Q  693 taatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaa 791  Q
    ||||||||||||| ||||||| || || ||| ||||||||||||||||| | ||||||||||| || | ||||| || |||||| ||||||| | |||||    
T  1736290 taatttcttgtaa-ctcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaa 1736388  T
Q  792 tattg 796  Q
    |||||    
T  1736389 tattg 1736393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 513 - 593
Target Start/End: Complemental strand, 21156783 - 21156703
Alignment:
Q  513 gacttcattcttcattttttgagagatcttcaagggagagaaatttggaaaactaaaggaggaaattttagagttaagtgt 593  Q
    ||||||||||||||| |||||| ||| ||||||| |||||||| |||  ||||||| ||||| || ||||||||| |||||    
T  21156783 gacttcattcttcatgttttgaaagagcttcaagagagagaaacttgtgaaactaatggagggaactttagagttgagtgt 21156703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 692 - 792
Target Start/End: Complemental strand, 21711325 - 21711226
Alignment:
Q  692 ctaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaa 791  Q
    ||||||||||||||| ||||| || || ||| ||||||||||||| ||||| ||||||||||| || | ||||| || |||||| ||||||| | |||||    
T  21711325 ctaatttcttgtaac-tctttgtaacactttcatcatagtggatttgagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaa 21711227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 696 - 792
Target Start/End: Original strand, 26928590 - 26928684
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaat 792  Q
    |||||||||||| |||| || || ||| ||||||||||||||||||||||||||||||| || | ||||| || |||| ||||||||| | ||||||    
T  26928590 tttcttgtaacc-ctttgtaacactttcatcatagtggattggagagttgctctctcccccagattaggtcatattgg-ctgaactgggtcaacaat 26928684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 696 - 792
Target Start/End: Complemental strand, 27453056 - 27452961
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaat 792  Q
    |||||||||||| |||| || || ||| ||||||||||||||||||| ||||||||||| |  | ||||| || |||||| ||||||||| ||||||    
T  27453056 tttcttgtaacc-ctttgtaacactttcatcatagtggattggagagctgctctctcccccggattaggtcatattggaccgaactggatcaacaat 27452961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 696 - 792
Target Start/End: Original strand, 27974941 - 27975036
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaat 792  Q
    ||||||||||| ||||| || || ||| ||||||||||||||||||| ||||||||||| || | ||||| || |||||| ||||||| | ||||||    
T  27974941 tttcttgtaac-tctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaat 27975036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 724 - 792
Target Start/End: Original strand, 33386682 - 33386750
Alignment:
Q  724 atcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaat 792  Q
    ||||||||||||||||||| ||||||||||| || | ||||| || |||||| ||||||||| ||||||    
T  33386682 atcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactggatcaacaat 33386750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 696 - 775
Target Start/End: Original strand, 6794702 - 6794780
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggac 775  Q
    ||||||||||| ||||| || || ||| ||||||||||||||||||| ||||||||||| |||| ||||| || ||||||    
T  6794702 tttcttgtaac-tctttgtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattggac 6794780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 696 - 781
Target Start/End: Complemental strand, 16264448 - 16264364
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaact 781  Q
    ||||||||||| ||||| || || ||| ||||||||||||||||||| ||||||||||| || | ||||| || |||||| |||||    
T  16264448 tttcttgtaac-tctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaact 16264364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 792
Target Start/End: Original strand, 18552867 - 18552967
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaaca 790  Q
    |||||||||||||| ||||||| || || ||| ||||||||||||||||| | ||||||||||| || | ||||| || |||||| ||||||| | ||||    
T  18552867 ctaatttcttgtaa-ctcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaaca 18552965  T
Q  791 at 792  Q
    ||    
T  18552966 at 18552967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 792
Target Start/End: Original strand, 30709774 - 30709874
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaaca 790  Q
    |||||||||||||| ||||||| || || ||| ||||||||||||||||| | ||||||||||| || | ||||| || |||||| ||||||| | ||||    
T  30709774 ctaatttcttgtaa-ctcttttgtaacaatttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaaca 30709872  T
Q  791 at 792  Q
    ||    
T  30709873 at 30709874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 696 - 781
Target Start/End: Complemental strand, 32143419 - 32143335
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaact 781  Q
    |||||||||||| |||| || || ||| ||||||||||||||||||| ||||||||||| || | ||||| || |||||| |||||    
T  32143419 tttcttgtaacc-ctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaact 32143335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 792
Target Start/End: Complemental strand, 36029196 - 36029096
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaaca 790  Q
    ||||||||||||||| |||||| || || ||| ||||||||||||||||||| |||| |||||| || | ||||| || |||||| ||||||| | ||||    
T  36029196 ctaatttcttgtaac-tcttttgtaacactttcatcatagtggattggagagctgctttctcccccagattaggtcatattggacagaactgggtcaaca 36029098  T
Q  791 at 792  Q
    ||    
T  36029097 at 36029096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 792
Target Start/End: Original strand, 40592766 - 40592866
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaaca 790  Q
    |||||||||||||| ||||||| || || ||| |||||||| |||||||||| | |||||||||||| | ||||| || |||||| ||||||| | ||||    
T  40592766 ctaatttcttgtaa-ctcttttgtaacactttcatcatagtcgattggagagcttctctctcccacagattaggtcatattggaccgaactgggtcaaca 40592864  T
Q  791 at 792  Q
    ||    
T  40592865 at 40592866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 692 - 796
Target Start/End: Complemental strand, 21156532 - 21156428
Alignment:
Q  692 ctaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaa 791  Q
    ||||||| || ||| |||||| ||||| ||||||||||||||||  || ||||| ||  |||  ||||||| |||||||||| | ||| | |||||||||    
T  21156532 ctaattttttttaatctctttgtatcagttttatcatagtggatcagaaagttggtcattcctccatagtatgttattttgggccgaatttgataaacaa 21156433  T
Q  792 tattg 796  Q
    |||||    
T  21156432 tattg 21156428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 724 - 792
Target Start/End: Original strand, 27986462 - 27986530
Alignment:
Q  724 atcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaat 792  Q
    ||||||||||||||||||| ||||||||||| || | ||||| || |||||| ||||||| | ||||||    
T  27986462 atcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaat 27986530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 515 - 598
Target Start/End: Complemental strand, 29196725 - 29196642
Alignment:
Q  515 cttcattcttcattttttgagagatcttcaagggagagaaatttggaaaactaaaggaggaaattttagagttaagtgtctttg 598  Q
    |||||||||||||||||||||||| || |||| |||| ||| |||| |||  |||||||| || ||||| ||| || |||||||    
T  29196725 cttcattcttcattttttgagagagctacaagagagaaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttg 29196642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 693 - 735
Target Start/End: Original strand, 5366309 - 5366351
Alignment:
Q  693 taatttcttgtaacctctttttatcatttttatcatagtggat 735  Q
    |||||||||||||||||||| ||||| ||| ||||||||||||    
T  5366309 taatttcttgtaacctctttgtatcactttcatcatagtggat 5366351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 692 - 781
Target Start/End: Complemental strand, 48438317 - 48438228
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaact 781  Q
    ||||||||||||||| |||||| || || ||| ||||||||||||||||| | ||||||||||| || | ||||| || |||||| |||||    
T  48438317 ctaatttcttgtaac-tcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaact 48438228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 753
Target Start/End: Complemental strand, 5797242 - 5797182
Alignment:
Q  692 ctaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcc 753  Q
    |||||||||||||||||||| | |||| | || ||||||| ||||||||| |||||||||||    
T  5797242 ctaatttcttgtaacctcttgt-atcactattttcatagtagattggagaattgctctctcc 5797182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 753
Target Start/End: Complemental strand, 21353665 - 21353604
Alignment:
Q  692 ctaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcc 753  Q
    |||||||||||||||   ||| ||||| ||| ||| ||||||||||||||| ||||||||||    
T  21353665 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 21353604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 2e-27; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 661 - 796
Target Start/End: Original strand, 33721522 - 33721657
Alignment:
Q  661 aattagggttcgttctttgtgtgttttttaactaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatag 760  Q
    ||||||| || ||||||| || |||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||  |||||||| ||||| || |||||    
T  33721522 aattaggttttgttctttatgagtttttaaactaatttcttgtaacctctttgtataattcttatcatagtggatcagagagttgttctcttccccatag 33721621  T
Q  761 taggttattttggactgaactggataaacaatattg 796  Q
    ||| | |||||||||| ||||||||||  |||||||    
T  33721622 tagatcattttggactaaactggataagtaatattg 33721657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 692 - 792
Target Start/End: Original strand, 31086467 - 31086567
Alignment:
Q  692 ctaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaa 791  Q
    |||||||||||||||  |||| || || ||| |||||||||||||||||||||||||||||||  | | ||| | || |||||||||||||| | |||||    
T  31086467 ctaatttcttgtaactcctttgtaacactttcatcatagtggattggagagttgctctctcccctagattagatcatattggactgaactgggtcaacaa 31086566  T
Q  792 t 792  Q
    |    
T  31086567 t 31086567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 695 - 753
Target Start/End: Original strand, 1115101 - 1115159
Alignment:
Q  695 atttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcc 753  Q
    |||||||||||||| ||| ||||||| ||||||||||||||||||||  ||||||||||    
T  1115101 atttcttgtaacctatttgtatcattcttatcatagtggattggagatctgctctctcc 1115159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 696 - 792
Target Start/End: Original strand, 5757477 - 5757572
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaat 792  Q
    ||||||||||| ||||| || || ||| ||||||||||||||||||| ||||||||||| || | ||||| || |||||| ||||||| | ||||||    
T  5757477 tttcttgtaac-tctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaat 5757572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 693 - 783
Target Start/End: Original strand, 21801339 - 21801429
Alignment:
Q  693 taatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactgg 783  Q
    ||||||||||||| ||||||| || || ||||||| ||||||||||||||| ||||| ||||| || | ||||| || ||||||||||||||    
T  21801339 taatttcttgtaa-ctcttttgtaacacttttatcttagtggattggagagctgctcgctcccccagattaggtcatattggactgaactgg 21801429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 781
Target Start/End: Original strand, 31076935 - 31077024
Alignment:
Q  692 ctaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaact 781  Q
    ||||||| ||||||||  ||| ||||| ||||||| ||||||||||||||| |||| ||||| | | ||||||| || ||||||| ||||    
T  31076935 ctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctatctcctagagagtaggtcatattggactaaact 31077024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 692 - 792
Target Start/End: Original strand, 10077159 - 10077259
Alignment:
Q  692 ctaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaa 791  Q
    ||||||||||||||| | ||| || || ||| ||||||||||||||||| | ||||||||||| || | ||||| || |||||| ||| ||| | |||||    
T  10077159 ctaatttcttgtaacttttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaattgggtcaacaa 10077258  T
Q  792 t 792  Q
    |    
T  10077259 t 10077259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 4e-25; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 661 - 796
Target Start/End: Original strand, 28617188 - 28617323
Alignment:
Q  661 aattagggttcgttctttgtgtgttttttaactaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatag 760  Q
    ||||||| || |||||||||| | |||| | |||||||||||||||| | || ||||| ||| ||| ||||||||||||||| ||||||||||| || ||    
T  28617188 aattaggttttgttctttgtgagcttttaagctaatttcttgtaaccccattgtatcactttcatcttagtggattggagagctgctctctcccccagag 28617287  T
Q  761 taggttattttggactgaactggataaacaatattg 796  Q
    ||||| || |||||| ||||||| ||||||||||||    
T  28617288 taggtcatattggaccgaactgggtaaacaatattg 28617323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 694 - 782
Target Start/End: Original strand, 5817266 - 5817353
Alignment:
Q  694 aatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactg 782  Q
    |||||||||||||| |||| ||||| ||| ||  ||||||||||||||| ||||||||||| || ||||||| || |||||| ||||||    
T  5817266 aatttcttgtaacccctttgtatcactttcatattagtggattggagagctgctctctccc-cagagtaggtcatattggaccgaactg 5817353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 693 - 792
Target Start/End: Complemental strand, 49091763 - 49091664
Alignment:
Q  693 taatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaa 791  Q
    |||||||||||||| |||||| || || ||| |||||||||||||||||||||||||||| || || | ||||| || ||||||| |||||| | |||||    
T  49091763 taatttcttgtaac-tcttttgtaacactttcatcatagtggattggagagttgctctcttccccagattaggtcatattggactaaactgggtcaacaa 49091665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 696 - 792
Target Start/End: Complemental strand, 21983384 - 21983287
Alignment:
Q  696 tttcttgtaac-ctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaat 792  Q
    ||||||||||| || ||| || || ||| ||||||||||||||||||| ||||||||||| || | ||||| || |||||| ||||||| | ||||||    
T  21983384 tttcttgtaactctttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaat 21983287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 792
Target Start/End: Complemental strand, 29159906 - 29159806
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaaca 790  Q
    ||||||||||||||| |||||| || || ||| ||||||||||||||||||| |||||||||||  | | ||||| || |||||| ||||||| | ||||    
T  29159906 ctaatttcttgtaac-tcttttgtaacactttcatcatagtggattggagagctgctctctcccctagattaggtcatattggaccgaactgggtcaaca 29159808  T
Q  791 at 792  Q
    ||    
T  29159807 at 29159806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 696 - 751
Target Start/End: Complemental strand, 21646104 - 21646050
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctct 751  Q
    |||||||||||| ||||||| || ||| ||||||||||||||||||| ||||||||    
T  21646104 tttcttgtaacc-ctttttaacactttcatcatagtggattggagagctgctctct 21646050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 696 - 754
Target Start/End: Complemental strand, 18413737 - 18413680
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctccc 754  Q
    |||||||||||| |||| || || ||| ||||||||||||||||||| |||||||||||    
T  18413737 tttcttgtaacc-ctttgtaacactttcatcatagtggattggagagctgctctctccc 18413680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 696 - 754
Target Start/End: Original strand, 44848683 - 44848740
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctccc 754  Q
    ||||||||||| ||||| || || ||| ||||||||||||||||||| |||||||||||    
T  44848683 tttcttgtaac-tctttgtaacactttcatcatagtggattggagagctgctctctccc 44848740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 792
Target Start/End: Original strand, 4796661 - 4796761
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaaca 790  Q
    |||||||||||||| ||||||| || || ||| ||||||||||||| ||| | |||| |||||| || | ||||| ||||||||| ||||||| | ||||    
T  4796661 ctaatttcttgtaa-ctcttttgtaacaatttcatcatagtggatttgagggctgctttctcccccagattaggtcattttggaccgaactgggttaaca 4796759  T
Q  791 at 792  Q
    ||    
T  4796760 at 4796761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 792
Target Start/End: Original strand, 46516304 - 46516404
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaaca 790  Q
    |||||||||||||| ||||||| || || ||| ||||||||||||||||| | |||||||||||  | | ||||| || |||||| ||||||| | ||||    
T  46516304 ctaatttcttgtaa-ctcttttgtaacactttcatcatagtggattggagggctgctctctcccctagattaggtcatattggaccgaactgggtcaaca 46516402  T
Q  791 at 792  Q
    ||    
T  46516403 at 46516404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 56; Significance: 9e-23; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 661 - 796
Target Start/End: Original strand, 15951 - 16086
Alignment:
Q  661 aattagggttcgttctttgtgtgttttttaactaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatag 760  Q
    ||||||| || |||||||||| |||||| | ||||||||||||||| ||||| ||| | | ||||||||||||||| ||| |||| ||||| |  |||||    
T  15951 aattaggttttgttctttgtgggtttttaagctaatttcttgtaacatctttgtataactcttatcatagtggattagagtgttgttctcttctccatag 16050  T
Q  761 taggttattttggactgaactggataaacaatattg 796  Q
    ||| ||||||||||| ||||||| |||| |||||||    
T  16051 tagattattttggaccgaactgggtaaataatattg 16086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 3e-19; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 661 - 798
Target Start/End: Complemental strand, 2630365 - 2630228
Alignment:
Q  661 aattagggttcgttctttgtgtgttttttaactaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatag 760  Q
    ||||||| || ||||||||||||||||| | ||||||| ||||||||  ||| ||||| ||| |||||||||||||| |||| |||| |||||| || ||    
T  2630365 aattaggttttgttctttgtgtgtttttaagctaatttattgtaacccttttgtatcactttcatcatagtggattgaagagctgctatctccctcaaag 2630266  T
Q  761 taggttattttggactgaactggataaacaatattgat 798  Q
     |||| || |||||| ||||| | | ||||||||||||    
T  2630265 caggtcatattggaccgaactaggttaacaatattgat 2630228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 693 - 795
Target Start/End: Original strand, 12084171 - 12084272
Alignment:
Q  693 taatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaat 792  Q
    |||||||||||||| ||||| || || ||| ||||||||||||||||||| |||||||| || |||| ||||| ||  ||||| ||||||| | ||||||    
T  12084171 taatttcttgtaac-tctttgtaacactttcatcatagtggattggagagctgctctctgccccatattaggtcatagtggaccgaactgggtcaacaat 12084269  T
Q  793 att 795  Q
    |||    
T  12084270 att 12084272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 513 - 593
Target Start/End: Complemental strand, 5611496 - 5611416
Alignment:
Q  513 gacttcattcttcattttttgagagatcttcaagggagagaaatttggaaaactaaaggaggaaattttagagttaagtgt 593  Q
    ||||||||||||||| |||||| ||| ||||||| |||||||| |||  ||||||| ||||| || ||||||||| |||||    
T  5611496 gacttcattcttcatgttttgaaagagcttcaagagagagaaacttgtgaaactaatggagggaactttagagttgagtgt 5611416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 696 - 792
Target Start/End: Original strand, 9353331 - 9353426
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaat 792  Q
    ||||||||||| ||||| || || ||| ||||||||||||||||||| ||||||||||| || | ||||| || |||||| ||||||| | ||||||    
T  9353331 tttcttgtaac-tctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaat 9353426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 696 - 792
Target Start/End: Original strand, 36932349 - 36932444
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaat 792  Q
    ||||||||||| ||||| || || ||| ||||||||||||||||||| ||||||||||| || | ||||| || |||||| ||||||| | ||||||    
T  36932349 tttcttgtaac-tctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaat 36932444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 690 - 792
Target Start/End: Complemental strand, 3880404 - 3880302
Alignment:
Q  690 aactaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaa 788  Q
    ||||||||||||||||| |||||| || || ||| ||||||||||||||||||| |||||||| || || | ||||| || |||||| |||||| || ||    
T  3880404 aactaatttcttgtaac-tcttttgtaacactttcatcatagtggattggagagctgctctctgcctcagattaggtcatattggacagaactgaatcaa 3880306  T
Q  789 caat 792  Q
    ||||    
T  3880305 caat 3880302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 690 - 792
Target Start/End: Original strand, 11916964 - 11917066
Alignment:
Q  690 aactaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaa 788  Q
    ||||| ||||||||||| |||||| || || ||| || |||||||||||||||| ||||||||||| |||| ||||| || |||||| ||||||| | ||    
T  11916964 aactattttcttgtaac-tcttttgtaacactttcattatagtggattggagagctgctctctcccccatattaggtcatattggaccgaactgggtcaa 11917062  T
Q  789 caat 792  Q
    ||||    
T  11917063 caat 11917066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 792
Target Start/End: Complemental strand, 10281854 - 10281754
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaaca 790  Q
    ||||||||||||||| |||||| || || ||| ||||||||||||||||||| ||||||||||| || |  |||| || |||||| ||||||| | ||||    
T  10281854 ctaatttcttgtaac-tcttttgtaacactttcatcatagtggattggagagctgctctctcccccagatcaggtcatattggaccgaactgggtcaaca 10281756  T
Q  791 at 792  Q
    ||    
T  10281755 at 10281754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 692 - 796
Target Start/End: Complemental strand, 5611245 - 5611141
Alignment:
Q  692 ctaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaa 791  Q
    ||||||| || ||| |||||| ||||| ||||||||||||||||  || ||||| ||  |||  ||||||| |||||||||| | ||| | |||||||||    
T  5611245 ctaattttttttaatctctttgtatcagttttatcatagtggatcagaaagttggtcattcctccatagtatgttattttgggccgaatttgataaacaa 5611146  T
Q  792 tattg 796  Q
    |||||    
T  5611145 tattg 5611141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 696 - 792
Target Start/End: Complemental strand, 15464630 - 15464535
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaat 792  Q
    ||||||||||| ||||| || || ||| ||||||||||||||||||| ||||||||||| || | ||| | || |||||| ||||||| | ||||||    
T  15464630 tttcttgtaac-tctttgtaacactttcatcatagtggattggagagctgctctctcccccagattagatcatattggaccgaactgggtcaacaat 15464535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 792
Target Start/End: Original strand, 33030914 - 33031034
Alignment:
Q  672 gttctttgtgtgttttttaactaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttatttt 771  Q
    |||||||||| | |||| | |||||||||||||||| | ||  |||| ||| ||| ||||| ||||||||| ||||||||||| || |||| || || ||    
T  33030914 gttctttgtgagcttttaagctaatttcttgtaaccccattgcatcactttcatcttagtgaattggagagctgctctctcccccagagtatgtcatatt 33031013  T
Q  772 ggactgaactggataaacaat 792  Q
     ||| |||||| || ||||||    
T  33031014 tgaccgaactgaattaacaat 33031034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 692 - 754
Target Start/End: Original strand, 11181826 - 11181888
Alignment:
Q  692 ctaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctccc 754  Q
    |||||||||||||||   ||| ||||| ||| ||| ||||||||||||| |||||||||||||    
T  11181826 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggttgctctctccc 11181888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 694 - 752
Target Start/End: Complemental strand, 28537727 - 28537669
Alignment:
Q  694 aatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctc 752  Q
    |||||||| ||| || ||| ||||| ||||||| ||||||||||||||| |||||||||    
T  28537727 aatttcttctaatctatttatatcacttttatcttagtggattggagagctgctctctc 28537669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 696 - 754
Target Start/End: Complemental strand, 38192271 - 38192214
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctccc 754  Q
    |||||||||||| |||| || || ||| ||||||||||||||||||| |||||||||||    
T  38192271 tttcttgtaacc-ctttgtaacactttcatcatagtggattggagagctgctctctccc 38192214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 696 - 754
Target Start/End: Complemental strand, 38219496 - 38219439
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctccc 754  Q
    |||||||||||| |||| || || ||| ||||||||||||||||||| |||||||||||    
T  38219496 tttcttgtaacc-ctttgtaacactttcatcatagtggattggagagctgctctctccc 38219439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 661 - 754
Target Start/End: Complemental strand, 6741986 - 6741893
Alignment:
Q  661 aattagggttcgttctttgtgtgttttttaactaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctccc 754  Q
    ||||||| || |||||||||| ||||   | ||||||||||||||| ||||| ||||| ||  ||| || |||||||||||| |||||| ||||    
T  6741986 aattaggttttgttctttgtgagtttgcaagctaatttcttgtaacttctttgtatcacttccatcttaatggattggagagctgctctatccc 6741893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 765
Target Start/End: Original strand, 7160897 - 7160970
Alignment:
Q  692 ctaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggt 765  Q
    ||||||| |||||||| |||| ||||| ||| |||  |||||||||||||| || ||||||||  |||||||||    
T  7160897 ctaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgatctctcccctatagtaggt 7160970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 1e-18; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 672 - 796
Target Start/End: Original strand, 2869667 - 2869791
Alignment:
Q  672 gttctttgtgtgttttttaactaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttatttt 771  Q
    |||||||||| | |||| | |||||||||||||||  |||| ||||| ||| ||| ||||||||||||||| | |||||||||  | ||||||| || ||    
T  2869667 gttctttgtgagcttttaagctaatttcttgtaactcctttgtatcactttcatcttagtggattggagagctactctctcccctagagtaggtcatatt 2869766  T
Q  772 ggactgaactggataaacaatattg 796  Q
    |||| ||||||| ||||||||||||    
T  2869767 ggaccgaactgggtaaacaatattg 2869791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 692 - 798
Target Start/End: Complemental strand, 8040165 - 8040057
Alignment:
Q  692 ctaatttcttgtaac-ctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaac 789  Q
    ||||||||||||||| ||||||| || || ||| ||||||||||||||||||| ||||||||||| || | ||||| || |||||||||||||| | |||    
T  8040165 ctaatttcttgtaactctcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggactgaactgggtcaac 8040066  T
Q  790 aatattgat 798  Q
    ||| |||||    
T  8040065 aatcttgat 8040057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 692 - 792
Target Start/End: Original strand, 8390144 - 8390244
Alignment:
Q  692 ctaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaa 791  Q
    |||||||||||||||   |||||| || ||| ||||||||||||||||||| ||||||||||| || | ||||| ||||||||| ||||||| | |||||    
T  8390144 ctaatttcttgtaactcttttttaacactttcatcatagtggattggagagctgctctctcccccaaattaggtcattttggaccgaactgggtcaacaa 8390243  T
Q  792 t 792  Q
    |    
T  8390244 t 8390244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 672 - 775
Target Start/End: Original strand, 27149268 - 27149371
Alignment:
Q  672 gttctttgtgtgttttttaactaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttatttt 771  Q
    |||||||||| | |||| |  ||||||||||| ||| |||| ||||| ||| || |||||||||||||||| ||||||||||| |||||||||| || ||    
T  27149268 gttctttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatatt 27149367  T
Q  772 ggac 775  Q
    ||||    
T  27149368 ggac 27149371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 692 - 792
Target Start/End: Original strand, 10707246 - 10707346
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaaca 790  Q
    |||||||||||||| ||||||| || || ||| |||||||||||||||||||||| |||||||| |||| ||||| || |||||| ||||||| | ||||    
T  10707246 ctaatttcttgtaa-ctcttttgtaacactttcatcatagtggattggagagttgttctctcccccatattaggtcatattggaccgaactgggtcaaca 10707344  T
Q  791 at 792  Q
    ||    
T  10707345 at 10707346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 692 - 792
Target Start/End: Complemental strand, 20522323 - 20522223
Alignment:
Q  692 ctaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaa 791  Q
    ||||||||||||||||  ||| || || ||| ||||||||||||||||| ||||||||||||| || | ||||| || |||||| ||||||| | |||||    
T  20522323 ctaatttcttgtaacccttttgtaacactttcatcatagtggattggagggttgctctctcccccagattaggtcatattggaccgaactgggtcaacaa 20522224  T
Q  792 t 792  Q
    |    
T  20522223 t 20522223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 690 - 792
Target Start/End: Complemental strand, 21630048 - 21629947
Alignment:
Q  690 aactaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaa 788  Q
    ||||||||||||||||| |||||| || || ||| ||||||||||||||||||| ||||||||||| || | ||||| || |||||||||||||| | ||    
T  21630048 aactaatttcttgtaac-tcttttgtaacactttcatcatagtggattggagagctgctctctccc-cagattaggtcatattggactgaactgggtcaa 21629951  T
Q  789 caat 792  Q
    ||||    
T  21629950 caat 21629947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 692 - 792
Target Start/End: Original strand, 10445438 - 10445538
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaaca 790  Q
    ||||||||||||||| |||||| || || ||| || |||||||||||||||| ||||||||||| || | ||||| || |||||| ||||||||| ||||    
T  10445438 ctaatttcttgtaac-tcttttgtaacactttcataatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactggatcaaca 10445536  T
Q  791 at 792  Q
    ||    
T  10445537 at 10445538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 692 - 792
Target Start/End: Complemental strand, 13569431 - 13569331
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaaca 790  Q
    ||||||||||||||| |||||| || || ||| ||||||||||||||||||| ||||||||||| || | ||||| || |||||| ||||||| | ||||    
T  13569431 ctaatttcttgtaac-tcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaaca 13569333  T
Q  791 at 792  Q
    ||    
T  13569332 at 13569331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 692 - 792
Target Start/End: Complemental strand, 17865306 - 17865206
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaaca 790  Q
    ||||||||||||||| |||||| || || ||| ||||||||||||||||| ||||||||||||| || | ||||| || || ||||||||||| | ||||    
T  17865306 ctaatttcttgtaac-tcttttgtaacactttcatcatagtggattggagggttgctctctcccccagattaggtcatattcgactgaactgggtcaaca 17865208  T
Q  791 at 792  Q
    ||    
T  17865207 at 17865206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 696 - 792
Target Start/End: Original strand, 28259176 - 28259271
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaat 792  Q
    ||||||||||| ||||| || || ||| ||||||||||||||||||| ||||||||||| || | ||||| || |||||| ||||||| | ||||||    
T  28259176 tttcttgtaac-tctttgtaacactttcatcatagtggattggagagctgctctctcccccaaattaggtcatattggaccgaactgggtcaacaat 28259271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 695 - 774
Target Start/End: Original strand, 15903886 - 15903965
Alignment:
Q  695 atttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttgga 774  Q
    ||||||||||||| |||| ||||| ||||||| |||||||||||||| || ||||||||  || ||||||| || |||||    
T  15903886 atttcttgtaacccctttgtatcacttttatcttagtggattggagattttctctctccgtcagagtaggtcatattgga 15903965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 696 - 783
Target Start/End: Original strand, 23078469 - 23078555
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactgg 783  Q
    ||||||||||| ||||| || || ||| |||||||||||||||||||||| |||||||| |||| ||||| || |||||  |||||||    
T  23078469 tttcttgtaac-tctttctaacactttcatcatagtggattggagagttgttctctcccccatattaggtcatattggatcgaactgg 23078555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 692 - 798
Target Start/End: Complemental strand, 3278104 - 3277999
Alignment:
Q  692 ctaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaa 791  Q
    |||||||||| ||||||| |||||||||| | |||||||| ||| | || | ||||||||||  |||||||||| ||||||||| ||| ||  |||||||    
T  3278104 ctaatttcttataacctc-ttttatcattctcatcatagtagatcgaagtgatgctctctcctccatagtaggtcattttggacggaaatgagtaaacaa 3278006  T
Q  792 tattgat 798  Q
    | |||||    
T  3278005 tgttgat 3277999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 661 - 751
Target Start/End: Original strand, 18674364 - 18674454
Alignment:
Q  661 aattagggttcgttctttgtgtgttttttaactaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctct 751  Q
    ||||| |||| |||||||||| | |||| |||||||||||||||||| |||  ||||| | || ||||||| ||| |||||| ||||||||    
T  18674364 aattatggtttgttctttgtgagcttttaaactaatttcttgtaaccccttggtatcactcttgtcatagtagatcggagagctgctctct 18674454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 661 - 771
Target Start/End: Original strand, 28770737 - 28770847
Alignment:
Q  661 aattagggttcgttctttgtgtgttttttaactaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatag 760  Q
    |||||| ||| |||||||||| | |||| | ||||||||||||||  ||||| ||||||| ||||| ||| |||| |||||| |||||| |||  || ||    
T  28770737 aattagagtttgttctttgtgagcttttaagctaatttcttgtaatatctttgtatcattcttatcgtagaggatcggagagctgctctatcctccagag 28770836  T
Q  761 taggttatttt 771  Q
    ||||| |||||    
T  28770837 taggtcatttt 28770847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 692 - 781
Target Start/End: Complemental strand, 39483034 - 39482945
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaact 781  Q
    ||||||||||||||| |||||| || |||||| |||||||||||||||||   ||||||||||| |||| ||||| || |||||| |||||    
T  39483034 ctaatttcttgtaac-tcttttgtaacattttcatcatagtggattggaggcctgctctctcccccatattaggtcatattggaccgaact 39482945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 691 - 792
Target Start/End: Original strand, 2838023 - 2838124
Alignment:
Q  691 actaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaaca 790  Q
    ||||||||||||||||   ||| ||||| ||| ||  ||||||||||||||  ||||||||||| || ||||||| || |||||| ||||||| | ||||    
T  2838023 actaatttcttgtaactcatttgtatcactttcattttagtggattggagatgtgctctctcccccagagtaggtcatattggaccgaactgggtcaaca 2838122  T
Q  791 at 792  Q
    ||    
T  2838123 at 2838124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 796
Target Start/End: Original strand, 16388464 - 16388569
Alignment:
Q  692 ctaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggtta-ttttggactgaactggataaaca 790  Q
    ||||||||||||||||||||| ||||  | |||||| ||||||  |||||| ||||||||||   | ||||||| | ||||||||  |||||| ||||||    
T  16388464 ctaatttcttgtaacctctttctatctctcttatcaaagtggaaaggagagctgctctctcctctagagtaggtcatttttggaccaaactgggtaaaca 16388563  T
Q  791 atattg 796  Q
    ||||||    
T  16388564 atattg 16388569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 792
Target Start/End: Original strand, 33528615 - 33528715
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaaca 790  Q
    |||||||||||||| ||||||| || || ||| ||||||||||||||||| ||||||||||  | |||| ||||| || |||||| ||||||| | ||||    
T  33528615 ctaatttcttgtaa-ctcttttgtaacactttcatcatagtggattggagggttgctctctttcccatattaggtcatattggaccgaactgggtcaaca 33528713  T
Q  791 at 792  Q
    ||    
T  33528714 at 33528715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 696 - 792
Target Start/End: Complemental strand, 25398593 - 25398499
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaat 792  Q
    |||||||||||| |||| || || ||| ||||||||||||||||||| ||||||||||| || | ||||| || |||| ||||||||| | ||||||    
T  25398593 tttcttgtaacc-ctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg-ctgaactgggtcaacaat 25398499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 724 - 792
Target Start/End: Original strand, 42039695 - 42039763
Alignment:
Q  724 atcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaat 792  Q
    ||||||||||||| ||||| |||||||||||||| | ||||| || |||||| ||||| ||| ||||||    
T  42039695 atcatagtggattagagagctgctctctcccacagattaggtcatattggaccgaactagatcaacaat 42039763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 696 - 754
Target Start/End: Complemental strand, 3491848 - 3491791
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctccc 754  Q
    |||||||||||| |||| || || ||| ||||||||||||||||||| |||||||||||    
T  3491848 tttcttgtaacc-ctttgtaacactttcatcatagtggattggagagctgctctctccc 3491791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 693 - 739
Target Start/End: Complemental strand, 5077833 - 5077787
Alignment:
Q  693 taatttcttgtaacctctttttatcatttttatcatagtggattgga 739  Q
    ||||||||||||||| |||| ||||| | ||||||||||||||||||    
T  5077833 taatttcttgtaaccactttgtatcactcttatcatagtggattgga 5077787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 696 - 754
Target Start/End: Complemental strand, 25403731 - 25403674
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctccc 754  Q
    |||||||||||| |||| || || ||| ||||||||||||||||||| |||||||||||    
T  25403731 tttcttgtaacc-ctttgtaacactttcatcatagtggattggagagctgctctctccc 25403674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 696 - 754
Target Start/End: Complemental strand, 25407720 - 25407663
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctccc 754  Q
    |||||||||||| |||| || || ||| ||||||||||||||||||| |||||||||||    
T  25407720 tttcttgtaacc-ctttgtaacactttcatcatagtggattggagagctgctctctccc 25407663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 692 - 754
Target Start/End: Complemental strand, 39532995 - 39532933
Alignment:
Q  692 ctaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctccc 754  Q
    |||||| | |||||||||| | ||||| | |||||||||||||||| ||||||| ||||||||    
T  39532995 ctaattccatgtaacctctatgtatcactcttatcatagtggattgaagagttgatctctccc 39532933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 792
Target Start/End: Complemental strand, 34388961 - 34388861
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaaca 790  Q
    ||||||||||||||| |||||| || || ||| ||||||||||||||||||| | ||||||||| || | ||||| || |||||| ||| ||| | ||||    
T  34388961 ctaatttcttgtaac-tcttttgtaacactttcatcatagtggattggagagctactctctcccccagattaggtcatattggaccgaattgggtcaaca 34388863  T
Q  791 at 792  Q
    ||    
T  34388862 at 34388861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 792
Target Start/End: Original strand, 34682328 - 34682428
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaaca 790  Q
    ||||||||||||||| |||||| || || ||| || |||||||||||||||| ||||||||||| || | || || || |||||| ||||||| | ||||    
T  34682328 ctaatttcttgtaac-tcttttgtaacactttcattatagtggattggagagctgctctctcccccagattatgtcatattggaccgaactgggtcaaca 34682426  T
Q  791 at 792  Q
    ||    
T  34682427 at 34682428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 3e-16; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 672 - 780
Target Start/End: Original strand, 9054811 - 9054919
Alignment:
Q  672 gttctttgtgtgttttttaactaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttatttt 771  Q
    |||||||||| | |||| | |||||||||||||||| |||| ||||| ||| ||| ||||||||| ||||| ||||||||||  || ||||||| || ||    
T  9054811 gttctttgtgcgcttttaagctaatttcttgtaaccactttgtatcactttcatcttagtggattagagagctgctctctcctccagagtaggtcatatt 9054910  T
Q  772 ggactgaac 780  Q
    |||||||||    
T  9054911 ggactgaac 9054919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 696 - 792
Target Start/End: Complemental strand, 7412439 - 7412344
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaat 792  Q
    ||||||||||| ||||| || || ||| ||||||||||||||||||| ||||||||||| |||| ||||| || |||||| ||||||| | ||||||    
T  7412439 tttcttgtaac-tctttgtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattggaccgaactgggtcaacaat 7412344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 690 - 754
Target Start/End: Complemental strand, 11772046 - 11771982
Alignment:
Q  690 aactaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctccc 754  Q
    |||||||||||| |||||||||| ||||| | |||||||||||||||||| ||||| ||||||||    
T  11772046 aactaatttcttttaacctctttgtatcactcttatcatagtggattggaaagttgatctctccc 11771982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 696 - 781
Target Start/End: Original strand, 19175753 - 19175837
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaact 781  Q
    ||||||||||| ||||| || || ||| ||||||||||||||||||||||||||||||| || | ||||| || |||||| |||||    
T  19175753 tttcttgtaac-tctttgtaacactttcatcatagtggattggagagttgctctctcccccagattaggtcatattggaccgaact 19175837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 692 - 792
Target Start/End: Complemental strand, 6813786 - 6813686
Alignment:
Q  692 ctaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaa 791  Q
    |||||||||||||||| |||| | ||| ||| ||| || |||||||||||| |||||||||||  |  ||||||||| |||||| ||||||| | |||||    
T  6813786 ctaatttcttgtaacccctttgtgtcactttcatcttattggattggagagctgctctctcccctagtgtaggttatattggaccgaactgggttaacaa 6813687  T
Q  792 t 792  Q
    |    
T  6813686 t 6813686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 693 - 798
Target Start/End: Original strand, 8863619 - 8863725
Alignment:
Q  693 taatttcttgtaacctctttttatcatt-tttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaa 791  Q
    |||||||||||||||||||| ||||| | ||| |||||||||||   |||||| || | |||  || |||||||||||||| || |||||||  ||||||    
T  8863619 taatttcttgtaacctctttgtatcactctttctcatagtggatcaaagagttactatttccatcagagtaggttattttgaaccgaactgggaaaacaa 8863718  T
Q  792 tattgat 798  Q
    |||||||    
T  8863719 tattgat 8863725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 792
Target Start/End: Original strand, 5702477 - 5702577
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaaca 790  Q
    |||||||||||||| ||||||| || || ||| ||||||| ||||||||| | ||||||||||| |||| ||||| || |||||| ||||||| | ||||    
T  5702477 ctaatttcttgtaa-ctcttttgtaacactttcatcataggggattggagggatgctctctcccccatattaggtcatattggaccgaactgggtcaaca 5702575  T
Q  791 at 792  Q
    ||    
T  5702576 at 5702577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 696 - 781
Target Start/End: Original strand, 31071228 - 31071312
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaact 781  Q
    |||||||||||| |||| || || ||| ||||||||||||||||||| ||||||||||| || | ||||| || |||||| |||||    
T  31071228 tttcttgtaacc-ctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaact 31071312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 692 - 795
Target Start/End: Complemental strand, 6127324 - 6127221
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaaca 790  Q
    ||||||||||||||| |||||| || || ||| ||||||||||||||||||| |||||||| || || | ||||| || |||||| ||||||  | ||||    
T  6127324 ctaatttcttgtaac-tcttttgtaacactttcatcatagtggattggagagctgctctcttccccaaattaggtcatattggaccgaactgagtcaaca 6127226  T
Q  791 atatt 795  Q
    |||||    
T  6127225 atatt 6127221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 724 - 792
Target Start/End: Original strand, 26403256 - 26403324
Alignment:
Q  724 atcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaat 792  Q
    ||||||||||||||||||| ||||||||||| || | ||||| || |||||| ||||||| | ||||||    
T  26403256 atcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaat 26403324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 696 - 754
Target Start/End: Original strand, 1261953 - 1262010
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctccc 754  Q
    |||||||||||| |||| || || ||| ||||||||||||||||||| |||||||||||    
T  1261953 tttcttgtaacc-ctttgtaacactttcatcatagtggattggagagctgctctctccc 1262010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 696 - 754
Target Start/End: Complemental strand, 4456126 - 4456069
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctccc 754  Q
    ||||||||||| ||||| || || ||| ||||||||||||||||||| |||||||||||    
T  4456126 tttcttgtaac-tctttgtaacactttcatcatagtggattggagagctgctctctccc 4456069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 692 - 754
Target Start/End: Complemental strand, 33079786 - 33079724
Alignment:
Q  692 ctaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctccc 754  Q
    |||||||||||||||||| || ||||| |  | |||||||||||||||||| || ||||||||    
T  33079786 ctaatttcttgtaacctccttgtatcactaatttcatagtggattggagagctgatctctccc 33079724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 753
Target Start/End: Complemental strand, 3051223 - 3051162
Alignment:
Q  692 ctaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcc 753  Q
    |||||||||||||||   ||| ||||| ||| ||| ||||||||||||||| ||||||||||    
T  3051223 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 3051162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 727 - 792
Target Start/End: Original strand, 9765848 - 9765913
Alignment:
Q  727 atagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaat 792  Q
    |||||||||||||||| ||||||||||| || | ||||| || |||||| ||||||| | ||||||    
T  9765848 atagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaat 9765913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 792
Target Start/End: Original strand, 23799571 - 23799671
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaaca 790  Q
    |||||||||||||| ||||||| || || ||| ||||||||||||||||| | ||||||||||  || | ||||| || |||||| ||||||| | ||||    
T  23799571 ctaatttcttgtaa-ctcttttgtaacactttcatcatagtggattggagggctgctctctcctccaaattaggtcatattggaccgaactgggtcaaca 23799669  T
Q  791 at 792  Q
    ||    
T  23799670 at 23799671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 672 - 749
Target Start/End: Original strand, 11032294 - 11032371
Alignment:
Q  672 gttctttgtgtgttttttaactaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctct 749  Q
    |||||||||| |||||| | ||||||||||||||||||||| ||||| | ||||||||||||||  || |||||||||    
T  11032294 gttctttgtgagtttttaatctaatttcttgtaacctctttatatcactattatcatagtggatcagatagttgctct 11032371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 692 - 782
Target Start/End: Original strand, 27104366 - 27104456
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactg 782  Q
    |||||||||||||| ||||||| || || ||| ||||||||||||||||||| ||||||||||| || | |||||||| |||||| ||||||    
T  27104366 ctaatttcttgtaa-ctcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggttatattggaccgaactg 27104456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 696 - 765
Target Start/End: Original strand, 13604622 - 13604690
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggt 765  Q
    ||||||||||| ||||| || |||||| ||||||||||||||||||| ||||||||||| |||| |||||    
T  13604622 tttcttgtaac-tctttgtaacattttcatcatagtggattggagagctgctctctcccccatattaggt 13604690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 661 - 753
Target Start/End: Original strand, 918443 - 918535
Alignment:
Q  661 aattagggttcgttctttgtgtgttttttaactaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcc 753  Q
    ||||| |||| |||||||||| |||| | |  |||||||||||||  ||||| ||||| | |||||||||||| |||||||||| ||||||||    
T  918443 aattatggtttgttctttgtgagtttgtaagataatttcttgtaatatctttgtatcactcttatcatagtggtttggagagtttctctctcc 918535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 694 - 754
Target Start/End: Complemental strand, 2210558 - 2210498
Alignment:
Q  694 aatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctccc 754  Q
    |||||||||||||||||||||| || | |||| ||||||||||||||||||| ||| ||||    
T  2210558 aatttcttgtaacctctttttaccactcttataatagtggattggagagttgttctttccc 2210498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 696 - 792
Target Start/End: Original strand, 19358842 - 19358936
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaat 792  Q
    |||||||||||| |||| || || ||| ||||||||||||||||||| ||||||||||| |||| ||||| || || ||||||||||| | ||||||    
T  19358842 tttcttgtaacc-ctttgtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatatt-gactgaactgggtcaacaat 19358936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 696 - 792
Target Start/End: Original strand, 19361431 - 19361525
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaat 792  Q
    |||||||||||| |||| || || ||| ||||||||||||||||||| ||||||||||| |||| ||||| || || ||||||||||| | ||||||    
T  19361431 tttcttgtaacc-ctttgtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatatt-gactgaactgggtcaacaat 19361525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 696 - 792
Target Start/End: Original strand, 19380071 - 19380165
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaat 792  Q
    |||||||||||| |||| || || ||| ||||||||||||||||||| ||||||||||| |||| ||||| || || ||||||||||| | ||||||    
T  19380071 tttcttgtaacc-ctttgtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatatt-gactgaactgggtcaacaat 19380165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 672 - 754
Target Start/End: Complemental strand, 3019853 - 3019771
Alignment:
Q  672 gttctttgtgtgttttttaactaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctccc 754  Q
    |||||||||| |||| | | | |||||||| |||||||||  |||||  |||||||||||||| |||||| ||||||||||||    
T  3019853 gttctttgtgagtttgtaagcaaatttcttataacctcttcgtatcacgtttatcatagtggaatggagaattgctctctccc 3019771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 792
Target Start/End: Complemental strand, 19073031 - 19072931
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaaca 790  Q
    ||||||||||||||| |||||| || || ||| ||| ||||||||||||||| ||||||||||| || | ||||| || |||||| ||||||| | ||||    
T  19073031 ctaatttcttgtaac-tcttttgtaacactttcatcttagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaaca 19072933  T
Q  791 at 792  Q
    ||    
T  19072932 at 19072931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 792
Target Start/End: Complemental strand, 19120921 - 19120821
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaaca 790  Q
    ||||||||||||||| |||||| || || ||| ||| ||||||||||||||| ||||||||||| || | ||||| || |||||| ||||||| | ||||    
T  19120921 ctaatttcttgtaac-tcttttgtaacactttcatcttagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaaca 19120823  T
Q  791 at 792  Q
    ||    
T  19120822 at 19120821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 661 - 774
Target Start/End: Original strand, 32736959 - 32737072
Alignment:
Q  661 aattagggttcgttctttgtgtgttttttaactaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatag 760  Q
    |||||||||| ||||||| ||   |||| | ||||||| ||||||||||||| |||||  || |||||||| |||  ||||||| ||||||| | || ||    
T  32736959 aattagggtttgttctttatgaacttttaagctaattttttgtaacctctttgtatcaccttcatcatagttgatcagagagtttctctctctcccagag 32737058  T
Q  761 taggttattttgga 774  Q
    ||||| ||||||||    
T  32737059 taggtcattttgga 32737072  T

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Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 792
Target Start/End: Original strand, 47703930 - 47704030
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaaca 790  Q
    ||||||||||||||  |||||| || || ||| ||||||||||||||||||| ||||||||||| || | ||||| || |||||| ||||||| | ||||    
T  47703930 ctaatttcttgtaat-tcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaaca 47704028  T
Q  791 at 792  Q
    ||    
T  47704029 at 47704030  T

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Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 696 - 792
Target Start/End: Original strand, 26644896 - 26644991
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaat 792  Q
    ||||||||||| ||||| || || ||| |||||| |||||||||||| ||||||||||| || | ||||| || |||||| ||||||| | ||||||    
T  26644896 tttcttgtaac-tctttgtaacactttcatcataatggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaat 26644991  T

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Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 693 - 749
Target Start/End: Original strand, 48382476 - 48382532
Alignment:
Q  693 taatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctct 749  Q
    |||||||||||||||| ||| ||||| ||| |||||| ||||||||||| |||||||    
T  48382476 taatttcttgtaacctatttgtatcactttcatcatattggattggagaattgctct 48382532  T

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Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 696 - 783
Target Start/End: Complemental strand, 3281806 - 3281720
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactgg 783  Q
    ||||||||||| ||||| || || ||| ||||| ||||||||||||| ||||||||||| || | ||||| || |||||| |||||||    
T  3281806 tttcttgtaac-tctttgtaacactttcatcatcgtggattggagagctgctctctcccccagattaggtcatattggaccgaactgg 3281720  T

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Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 692 - 782
Target Start/End: Original strand, 16124510 - 16124600
Alignment:
Q  692 ctaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactg 782  Q
    |||||||||||||| ||||||| || || ||| ||||||||||||||||| | ||||||||||| || | ||||| || |||||| ||||||    
T  16124510 ctaatttcttgtaa-ctcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactg 16124600  T

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Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 692 - 801
Target Start/End: Complemental strand, 21149360 - 21149250
Alignment:
Q  692 ctaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaac-a 790  Q
    |||||||||||||  |||||| ||||| |  | ||||| || ||||||||||| |||||| || || |||| || ||||||| | ||||| ||||||| |    
T  21149360 ctaatttcttgtagtctctttgtatcactcatttcatattgaattggagagtttctctcttccccaaagtatgtcattttgggcagaactagataaacaa 21149261  T
Q  791 atattgatatg 801  Q
    |||||||||||    
T  21149260 atattgatatg 21149250  T

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Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 696 - 754
Target Start/End: Original strand, 24202768 - 24202825
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctccc 754  Q
    |||||||||||| |||| || || ||| ||||||||||||||||||| |||||||||||    
T  24202768 tttcttgtaacc-ctttgtaacactttcatcatagtggattggagagctgctctctccc 24202825  T

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Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 661 - 735
Target Start/End: Original strand, 35109500 - 35109574
Alignment:
Q  661 aattagggttcgttctttgtgtgttttttaactaatttcttgtaacctctttttatcatttttatcatagtggat 735  Q
    ||||| |||| |||||||||| | |||| | ||||||||||||||||| ||| ||||  | ||||||||||||||    
T  35109500 aattaaggtttgttctttgtgagcttttaagctaatttcttgtaacctatttgtatctatcttatcatagtggat 35109574  T

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Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 707 - 792
Target Start/End: Complemental strand, 37069858 - 37069773
Alignment:
Q  707 ctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaat 792  Q
    |||||| || || ||| |||||||||||| |||||| ||||||||||| || | ||||| || |||||| ||||||| | ||||||    
T  37069858 ctctttgtaacactttcatcatagtggatcggagagatgctctctcccccagattaggtcatattggaccgaactgggtcaacaat 37069773  T

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Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 664 - 796
Target Start/End: Complemental strand, 14813 - 14682
Alignment:
Q  664 tagggttcgttctttgtgtgttttttaactaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtag 763  Q
    ||||||| |||||||||| | |||| | ||||||||| ||||||||||| ||||| | |||||||| | ||| |||| ||||||||||| | |||||||     
T  14813 tagggttagttctttgtgagcttttaagctaatttctcgtaacctctttgtatcactcttatcataattgatcggag-gttgctctctctcccatagtat 14715  T
Q  764 gttattttggactgaactggataaacaatattg 796  Q
    || |||||||||  || | | ||||||||||||    
T  14714 gtcattttggaccaaattaggtaaacaatattg 14682  T

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Target: scaffold0006 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 696 - 765
Target Start/End: Original strand, 133279 - 133347
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggt 765  Q
    ||||||||||| ||||| || |||||| ||||||||||||||||||| ||||||||||| |||| |||||    
T  133279 tttcttgtaac-tctttgtaacattttcatcatagtggattggagagctgctctctcccccatattaggt 133347  T

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Target: scaffold0140 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 696 - 792
Target Start/End: Original strand, 8418 - 8513
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaat 792  Q
    ||||||||||| ||||| || || ||| ||||||||||||||||||| ||||||||||| || | ||||| || |||||| ||||||| | ||||||    
T  8418 tttcttgtaac-tctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaat 8513  T

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Target: scaffold0036 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 692 - 792
Target Start/End: Complemental strand, 85785 - 85686
Alignment:
Q  692 ctaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaa 791  Q
    ||||||||||||||| ||||| || || ||| ||||| |||||||||||||  |||||||||| || | ||||| || |||||||||||||| | |||||    
T  85785 ctaatttcttgtaac-tctttgtaacactttcatcatggtggattggagagccgctctctcccccagattaggtcatattggactgaactgggtcaacaa 85687  T

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Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 661 - 752
Target Start/End: Original strand, 102457 - 102548
Alignment:
Q  661 aattagggttcgttctttgtgtgttttttaactaatttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctc 752  Q
    |||||||||| ||| |||||| | |||| |  |||||||||||||||||||| ||||| | ||||||| ||||||  |||||||| ||||||    
T  102457 aattagggtttgttttttgtgagcttttaagataatttcttgtaacctctttgtatcactcttatcattgtggatcagagagttgttctctc 102548  T

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Target: scaffold0148 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 690 - 783
Target Start/End: Complemental strand, 10834 - 10741
Alignment:
Q  690 aactaatttcttgtaacctctttt-tatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactgg 783  Q
    ||||||||||||||||| |||||| || || ||| ||| ||||||||||||||| ||||||||||| || | ||||| || |||||| |||||||    
T  10834 aactaatttcttgtaac-tcttttgtaacactttcatcttagtggattggagagctgctctctcccccaaattaggtcatattggaccgaactgg 10741  T

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Target: scaffold0087 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 696 - 792
Target Start/End: Original strand, 43960 - 44055
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctcccacatagtaggttattttggactgaactggataaacaat 792  Q
    ||||||||||| ||||| || || ||| ||||||||||||||||||| ||||||||||| || | ||| | || |||||| ||||||| | ||||||    
T  43960 tttcttgtaac-tctttgtaacactttcatcatagtggattggagagctgctctctcccccagaatagatcatattggaccgaactgggtcaacaat 44055  T

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Target: scaffold0188 (Bit Score: 31; Significance: 0.00000008; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 696 - 754
Target Start/End: Original strand, 17951 - 18008
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctccc 754  Q
    |||||||||||| |||| || || ||| ||||||||||||||||||| |||||||||||    
T  17951 tttcttgtaacc-ctttgtaacactttcatcatagtggattggagagctgctctctccc 18008  T

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Target: scaffold0188; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 696 - 754
Target Start/End: Original strand, 24044 - 24101
Alignment:
Q  696 tttcttgtaacctctttttatcatttttatcatagtggattggagagttgctctctccc 754  Q
    |||||||||||| |||| || || ||| ||||||||||||||||||| |||||||||||    
T  24044 tttcttgtaacc-ctttgtaacactttcatcatagtggattggagagctgctctctccc 24101  T

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