View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4215_high_17 (Length: 251)

Name: NF4215_high_17
Description: NF4215
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4215_high_17
NF4215_high_17
[»] chr3 (41 HSPs)
chr3 (97-251)||(51980750-51980917)
chr3 (183-251)||(42528069-42528137)
chr3 (177-251)||(32999664-32999738)
chr3 (11-61)||(51980953-51981003)
chr3 (106-163)||(42527978-42528036)
chr3 (106-251)||(25999092-25999250)
chr3 (183-251)||(6124729-6124797)
chr3 (177-251)||(12764689-12764763)
chr3 (177-251)||(19274748-19274822)
chr3 (177-246)||(17666638-17666707)
chr3 (210-251)||(32390154-32390195)
chr3 (105-161)||(34435896-34435953)
chr3 (105-161)||(41991605-41991662)
chr3 (177-242)||(42293004-42293069)
chr3 (177-222)||(51760518-51760563)
chr3 (105-161)||(54463377-54463434)
chr3 (210-246)||(41889461-41889497)
chr3 (183-250)||(43968365-43968432)
chr3 (109-151)||(6124843-6124885)
chr3 (105-151)||(8321352-8321398)
chr3 (177-251)||(8321438-8321512)
chr3 (177-251)||(8879382-8879456)
chr3 (104-161)||(12764792-12764850)
chr3 (177-251)||(34435982-34436056)
chr3 (177-251)||(41991691-41991765)
chr3 (177-243)||(45356425-45356491)
chr3 (177-246)||(9558867-9558936)
chr3 (210-251)||(12122921-12122962)
chr3 (210-251)||(32111600-32111641)
chr3 (104-164)||(50938155-50938216)
chr3 (105-161)||(51063031-51063088)
chr3 (105-161)||(52184748-52184805)
chr3 (177-246)||(52959315-52959384)
chr3 (210-246)||(7041753-7041789)
chr3 (183-251)||(17666820-17666888)
chr3 (210-246)||(22978102-22978138)
chr3 (210-246)||(42167372-42167408)
chr3 (210-246)||(43860749-43860785)
chr3 (183-251)||(48051012-48051080)
chr3 (210-246)||(48071999-48072035)
chr3 (210-250)||(50938277-50938317)
[»] chr4 (42 HSPs)
chr4 (97-246)||(53431653-53431816)
chr4 (177-251)||(30653298-30653372)
chr4 (97-164)||(55495102-55495170)
chr4 (194-251)||(55496061-55496118)
chr4 (13-61)||(55495018-55495066)
chr4 (184-246)||(24152699-24152761)
chr4 (184-251)||(40674765-40674833)
chr4 (177-251)||(47633851-47633925)
chr4 (183-246)||(51941126-51941189)
chr4 (177-251)||(6238206-6238280)
chr4 (104-161)||(25687107-25687165)
chr4 (105-161)||(6238309-6238366)
chr4 (116-164)||(7141075-7141124)
chr4 (105-161)||(19801784-19801841)
chr4 (105-161)||(37114355-37114412)
chr4 (210-251)||(38005563-38005604)
chr4 (105-161)||(47633765-47633822)
chr4 (105-161)||(49335112-49335169)
chr4 (109-161)||(55001669-55001722)
chr4 (183-251)||(6287855-6287923)
chr4 (183-246)||(55001757-55001820)
chr4 (104-161)||(6287958-6288016)
chr4 (177-251)||(19800944-19801018)
chr4 (177-251)||(19801870-19801944)
chr4 (177-251)||(33984106-33984180)
chr4 (177-251)||(39840202-39840276)
chr4 (183-225)||(40685822-40685864)
chr4 (177-251)||(53284025-53284099)
chr4 (210-251)||(19912691-19912732)
chr4 (177-222)||(25687033-25687078)
chr4 (210-243)||(27531856-27531889)
chr4 (210-251)||(30411292-30411333)
chr4 (105-161)||(32012668-32012725)
chr4 (106-151)||(40685910-40685955)
chr4 (177-246)||(43374618-43374687)
chr4 (105-157)||(44448572-44448625)
chr4 (105-161)||(53284128-53284185)
chr4 (177-246)||(54683620-54683689)
chr4 (210-246)||(7113629-7113665)
chr4 (183-243)||(37498229-37498289)
chr4 (210-246)||(48953053-48953089)
chr4 (210-246)||(49648860-49648896)
[»] chr8 (36 HSPs)
chr8 (97-251)||(2773496-2773664)
chr8 (105-251)||(39733744-39733891)
chr8 (183-251)||(3512489-3512557)
chr8 (177-251)||(20697513-20697587)
chr8 (105-161)||(25100136-25100193)
chr8 (193-246)||(34903401-34903454)
chr8 (105-161)||(35397940-35397997)
chr8 (183-251)||(36859246-36859314)
chr8 (177-251)||(22215129-22215203)
chr8 (177-251)||(24804494-24804568)
chr8 (105-161)||(5574723-5574780)
chr8 (105-161)||(17121936-17121993)
chr8 (105-161)||(20697427-20697484)
chr8 (105-161)||(25100367-25100424)
chr8 (105-161)||(35160191-35160248)
chr8 (105-161)||(38746878-38746935)
chr8 (105-161)||(40529622-40529679)
chr8 (105-161)||(43800690-43800747)
chr8 (183-243)||(16786544-16786604)
chr8 (210-246)||(38364511-38364547)
chr8 (183-246)||(41355634-41355697)
chr8 (104-161)||(16786451-16786509)
chr8 (177-251)||(43800776-43800850)
chr8 (210-251)||(4477659-4477700)
chr8 (105-161)||(5838377-5838434)
chr8 (210-251)||(12208824-12208865)
chr8 (210-251)||(12453252-12453293)
chr8 (105-161)||(14911886-14911943)
chr8 (210-251)||(18146360-18146401)
chr8 (177-246)||(35057308-35057377)
chr8 (210-251)||(41356308-41356349)
chr8 (210-251)||(43150270-43150311)
chr8 (210-251)||(45069859-45069900)
chr8 (210-246)||(29725764-29725800)
chr8 (210-246)||(31642789-31642825)
chr8 (210-246)||(35019510-35019546)
[»] chr1 (42 HSPs)
chr1 (177-251)||(41865305-41865379)
chr1 (99-163)||(28343808-28343873)
chr1 (177-251)||(2459653-2459727)
chr1 (177-251)||(38058767-38058841)
chr1 (177-243)||(44277972-44278038)
chr1 (106-164)||(2459568-2459627)
chr1 (97-158)||(31656301-31656362)
chr1 (177-246)||(46742479-46742548)
chr1 (109-164)||(38058867-38058923)
chr1 (106-163)||(11332961-11333019)
chr1 (106-163)||(11490982-11491040)
chr1 (177-251)||(46315695-46315769)
chr1 (105-161)||(11823705-11823762)
chr1 (105-161)||(27747728-27747785)
chr1 (105-161)||(28314775-28314832)
chr1 (105-161)||(28955476-28955533)
chr1 (105-161)||(30358195-30358252)
chr1 (105-161)||(47326505-47326562)
chr1 (105-161)||(50586100-50586157)
chr1 (183-251)||(12014660-12014728)
chr1 (106-161)||(25365881-25365937)
chr1 (106-161)||(33076725-33076781)
chr1 (177-243)||(9423062-9423128)
chr1 (177-251)||(27747625-27747699)
chr1 (177-243)||(28955562-28955628)
chr1 (177-251)||(30358092-30358166)
chr1 (177-251)||(36739571-36739645)
chr1 (177-251)||(39325629-39325703)
chr1 (104-161)||(41865408-41865466)
chr1 (177-251)||(50586186-50586260)
chr1 (210-251)||(3796004-3796045)
chr1 (104-164)||(4638510-4638571)
chr1 (210-251)||(5698144-5698185)
chr1 (105-161)||(12014763-12014820)
chr1 (210-251)||(14390440-14390481)
chr1 (105-161)||(39325732-39325789)
chr1 (210-246)||(4640133-4640169)
chr1 (210-250)||(23259104-23259144)
chr1 (210-246)||(44109972-44110008)
chr1 (210-246)||(44299984-44300020)
chr1 (183-251)||(45900187-45900255)
chr1 (105-149)||(45900303-45900347)
[»] chr2 (36 HSPs)
chr2 (177-246)||(6432193-6432262)
chr2 (184-251)||(10361411-10361478)
chr2 (177-242)||(45376936-45377001)
chr2 (105-251)||(11017966-11018113)
chr2 (177-251)||(42097919-42097993)
chr2 (177-251)||(43568381-43568455)
chr2 (177-251)||(8875691-8875765)
chr2 (177-251)||(36936080-36936154)
chr2 (105-161)||(1875954-1876011)
chr2 (105-161)||(5774214-5774271)
chr2 (105-161)||(7454653-7454710)
chr2 (105-161)||(8875794-8875851)
chr2 (105-161)||(12160835-12160892)
chr2 (177-242)||(14958147-14958212)
chr2 (105-161)||(14958241-14958298)
chr2 (105-161)||(34245367-34245424)
chr2 (105-161)||(39241082-39241139)
chr2 (183-251)||(39241174-39241242)
chr2 (200-251)||(16496646-16496697)
chr2 (106-163)||(10361512-10361570)
chr2 (177-251)||(12160921-12160995)
chr2 (177-251)||(30523627-30523701)
chr2 (177-251)||(34245264-34245338)
chr2 (177-251)||(42519732-42519806)
chr2 (210-251)||(7183322-7183363)
chr2 (210-251)||(10247423-10247464)
chr2 (105-161)||(16496537-16496594)
chr2 (210-251)||(18109755-18109796)
chr2 (105-161)||(36935994-36936051)
chr2 (105-161)||(38324359-38324416)
chr2 (105-161)||(42519835-42519892)
chr2 (183-251)||(5774111-5774179)
chr2 (177-245)||(7454556-7454624)
chr2 (210-246)||(14452323-14452359)
chr2 (210-246)||(33178984-33179020)
chr2 (210-246)||(36600960-36600996)
[»] chr7 (48 HSPs)
chr7 (97-164)||(981455-981523)
chr7 (183-251)||(46350849-46350917)
chr7 (177-246)||(21920803-21920872)
chr7 (183-251)||(6476944-6477012)
chr7 (183-251)||(46534426-46534494)
chr7 (177-251)||(42997532-42997606)
chr7 (97-161)||(42997635-42997700)
chr7 (183-250)||(14792130-14792197)
chr7 (177-251)||(3370467-3370541)
chr7 (177-251)||(46349891-46349965)
chr7 (177-246)||(25696056-25696125)
chr7 (105-161)||(27826830-27826887)
chr7 (177-246)||(28235308-28235377)
chr7 (105-161)||(28958043-28958100)
chr7 (105-161)||(35647537-35647594)
chr7 (105-161)||(42328085-42328142)
chr7 (105-161)||(46536243-46536300)
chr7 (183-251)||(42265286-42265354)
chr7 (184-251)||(43158206-43158274)
chr7 (21-61)||(44103886-44103926)
chr7 (188-251)||(981355-981418)
chr7 (106-149)||(30523876-30523919)
chr7 (183-246)||(30523967-30524030)
chr7 (183-246)||(48935258-48935321)
chr7 (104-161)||(3370570-3370628)
chr7 (177-251)||(6243885-6243959)
chr7 (177-251)||(27826727-27826801)
chr7 (177-251)||(28494283-28494357)
chr7 (177-251)||(42329030-42329104)
chr7 (104-161)||(46349804-46349862)
chr7 (105-158)||(46350757-46350811)
chr7 (105-161)||(4060473-4060530)
chr7 (210-251)||(9806629-9806670)
chr7 (105-161)||(28494197-28494254)
chr7 (105-161)||(29994137-29994194)
chr7 (210-251)||(30582689-30582730)
chr7 (105-161)||(31031815-31031872)
chr7 (105-161)||(31226792-31226849)
chr7 (104-164)||(33979734-33979795)
chr7 (210-251)||(35670394-35670435)
chr7 (210-251)||(37658155-37658196)
chr7 (210-251)||(40061181-40061222)
chr7 (105-161)||(42328944-42329001)
chr7 (212-245)||(42329597-42329630)
chr7 (105-161)||(43337754-43337811)
chr7 (105-161)||(46672627-46672684)
chr7 (210-246)||(1602166-1602202)
chr7 (97-164)||(44103782-44103850)
[»] chr5 (48 HSPs)
chr5 (177-251)||(7157505-7157579)
chr5 (177-251)||(35766577-35766651)
chr5 (11-61)||(36959717-36959767)
chr5 (97-164)||(36959613-36959681)
chr5 (106-164)||(2890896-2890955)
chr5 (193-251)||(36959484-36959542)
chr5 (105-161)||(76535-76592)
chr5 (181-246)||(5050113-5050178)
chr5 (105-161)||(41734190-41734247)
chr5 (195-251)||(36944265-36944321)
chr5 (183-250)||(17540280-17540347)
chr5 (177-251)||(6789621-6789695)
chr5 (177-251)||(13359488-13359562)
chr5 (177-251)||(27813008-27813082)
chr5 (177-251)||(34589933-34590007)
chr5 (105-161)||(10815184-10815241)
chr5 (105-161)||(15498766-15498823)
chr5 (105-161)||(27812922-27812979)
chr5 (105-161)||(29525242-29525299)
chr5 (105-161)||(36761183-36761240)
chr5 (105-161)||(37530666-37530723)
chr5 (105-161)||(42709432-42709489)
chr5 (183-246)||(5102716-5102779)
chr5 (183-222)||(24463564-24463603)
chr5 (183-246)||(25881530-25881593)
chr5 (188-246)||(2890992-2891050)
chr5 (177-243)||(7615009-7615075)
chr5 (177-251)||(15498663-15498737)
chr5 (177-251)||(16218315-16218389)
chr5 (177-251)||(24171383-24171457)
chr5 (177-251)||(29525328-29525402)
chr5 (105-151)||(35638896-35638942)
chr5 (177-251)||(37530752-37530826)
chr5 (177-251)||(41734276-41734350)
chr5 (177-251)||(42709329-42709403)
chr5 (105-161)||(6789535-6789592)
chr5 (105-157)||(7614923-7614976)
chr5 (105-161)||(12280902-12280959)
chr5 (105-161)||(12939803-12939860)
chr5 (105-161)||(12953753-12953810)
chr5 (105-161)||(13359402-13359459)
chr5 (177-246)||(17645329-17645398)
chr5 (105-161)||(23590760-23590817)
chr5 (105-161)||(24171486-24171543)
chr5 (105-161)||(34589847-34589904)
chr5 (105-161)||(42422930-42422987)
chr5 (211-251)||(4559521-4559561)
chr5 (210-246)||(20017346-20017382)
[»] scaffold1391 (2 HSPs)
scaffold1391 (108-164)||(1420-1477)
scaffold1391 (183-243)||(1508-1568)
[»] chr6 (18 HSPs)
chr6 (108-164)||(6833971-6834028)
chr6 (183-243)||(6834059-6834119)
chr6 (177-251)||(22707309-22707383)
chr6 (177-251)||(25023462-25023536)
chr6 (210-251)||(190941-190982)
chr6 (105-161)||(12130602-12130659)
chr6 (105-161)||(20645779-20645836)
chr6 (105-161)||(22707412-22707469)
chr6 (105-161)||(24119160-24119217)
chr6 (177-251)||(24119246-24119320)
chr6 (210-251)||(1789805-1789846)
chr6 (104-164)||(15508467-15508528)
chr6 (210-251)||(18368774-18368815)
chr6 (177-246)||(21459045-21459114)
chr6 (105-161)||(21778007-21778064)
chr6 (105-161)||(25023376-25023433)
chr6 (183-251)||(12130499-12130567)
chr6 (210-250)||(34574635-34574675)
[»] scaffold0325 (1 HSPs)
scaffold0325 (105-161)||(18497-18554)
[»] scaffold0330 (1 HSPs)
scaffold0330 (105-161)||(7112-7169)
[»] scaffold0115 (2 HSPs)
scaffold0115 (210-251)||(4167-4208)
scaffold0115 (210-251)||(11907-11948)


Alignment Details
Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 97 - 251
Target Start/End: Complemental strand, 51980917 - 51980750
Alignment:
Q  97 ggttattattggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctcnnnnnnnnctataagctcgt----------- 184  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||         ||||||||||||               
T  51980917 ggttattattggaagaaaatgtaaaaagctatcagctataagttaaaaagctacttgaaatagcttct-gaaaaaagctataagctcgtgaaaaaagctc 51980819  T
Q  185 --taccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
      ||||||| |||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||    
T  51980818 gttaccaaacacatcatgttttcatccaacaagcttataagctagtccaacaagctataaactaacttt 51980750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 42528069 - 42528137
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||| |||||| ||||||||||||||||||||||| || |||||||||||||||||||| ||||    
T  42528069 gttaccaaacacatcacgttttcatccaacaagcttataagctagtccaacaagctataagctagcttt 42528137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 32999664 - 32999738
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||| ||  ||||| ||||||||||||| ||||    
T  32999664 aagctcgttaccaaacacatcacgttttcatccaacaagcttataagctaatccaagaagctataagctagcttt 32999738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 51981003 - 51980953
Alignment:
Q  11 cagagaagagaaaaacaaaacgtgagtgagtgggacggttgatttgtttac 61  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  51981003 cagagaagagaaaaacaaaacgtgagtgagtgggacggttggtttgtttac 51980953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 42527978 - 42528036
Alignment:
Q  106 tggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttct 163  Q
    ||||||||||||| || |||||||||||||||| |||||||||| ||||||||||||||    
T  42527978 tggaagaaaatgtgaaaagctatcagctataagctaaaaagctacttgaaatagcttct 42528036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 251
Target Start/End: Original strand, 25999092 - 25999250
Alignment:
Q  106 tggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctcnnnnnnnnctataagctcgtta------------ccaaat 192  Q
    ||||||||||||| || |||||||||||||||| ||||||| || |||||||||||||||        |||||||||||| |            |||||     
T  25999092 tggaagaaaatgtgaaaagctatcagctataagttaaaaaggtacttgaaatagcttctcaaaaaaagctataagctcgtgagaaaagcttgttccaaac 25999191  T
Q  193 acatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    |||||| ||||||||||||||| |||||||| | || ||| ||||||||||||||||||    
T  25999192 acatcacgttttcatccaacaaacttataaattagttcaataagctataagctaacttt 25999250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 6124797 - 6124729
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||| |||||| ||||||||| |||||||||||||  | |||||||||| ||||||||| ||||    
T  6124797 gttaccaaacacatcacgttttcatcaaacaagcttataagatagtccaacaagttataagctatcttt 6124729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 12764763 - 12764689
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| |||||| ||||||||||| ||||||||||| ||  ||||| ||||||||| ||| ||||    
T  12764763 aagcttgttaccaaacacatcacgttttcatccagcaagcttataagctaatccaaaaagctataaactagcttt 12764689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 19274822 - 19274748
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || |||  |||||||||||| ||||||||| ||  ||||||||||||||||||| ||||    
T  19274822 aagcttgttaccaaacacgtcacattttcatccaacgagcttataagctaatccaacaagctataagctagcttt 19274748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 17666707 - 17666638
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||| |||||||||||| |  |||||| ||||||||||||||||| ||  | |||||||||||||||||    
T  17666707 aagcttgttaccaaatacgttgtgttttgatccaacaagcttataagctaattcaacaagctataagcta 17666638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 32390154 - 32390195
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  32390154 aacaagcttataagctagtccaacaagctataagctaacttt 32390195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 34435896 - 34435953
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  34435896 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 34435953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 41991605 - 41991662
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  41991605 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 41991662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 242
Target Start/End: Complemental strand, 42293069 - 42293004
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataa 242  Q
    ||||| ||||||||| |||||| ||||||||||||| | ||||||| || ||||||||| ||||||    
T  42293069 aagcttgttaccaaacacatcacgttttcatccaacgaacttataagctagtccaacaaactataa 42293004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 51760563 - 51760518
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataa 222  Q
    ||||| ||||||||| |||||| |||||||||||||||||||||||    
T  51760563 aagcttgttaccaaacacatcacgttttcatccaacaagcttataa 51760518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 54463377 - 54463434
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  54463377 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 54463434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 41889461 - 41889497
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagcta 246  Q
    |||||||||||||||| ||||||||||||||||||||    
T  41889461 aacaagcttataaactagtccaacaagctataagcta 41889497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 43968365 - 43968432
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaactt 250  Q
    ||||||||| || ||||||||| ||||||||||||||||| ||  | ||||||  |||||||||||||    
T  43968365 gttaccaaacacgtcatgttttgatccaacaagcttataagctaattcaacaaattataagctaactt 43968432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 6124885 - 6124843
Alignment:
Q  109 aagaaaatgtaaagagctatcagctataagataaaaagctatt 151  Q
    |||||||||| || |||||||||||||||| ||||||||||||    
T  6124885 aagaaaatgtgaaaagctatcagctataagctaaaaagctatt 6124843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 8321352 - 8321398
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagctatt 151  Q
    |||||||||||| |||| ||||| |||||||||| ||||||||||||    
T  8321352 ttggaagaaaatataaaaagctaccagctataagctaaaaagctatt 8321398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 8321438 - 8321512
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  8321438 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttt 8321512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 8879456 - 8879382
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| |||||||||||| ||| ||||||||| ||| | ||||||| ||  |||||||| |||||||||| ||||    
T  8879456 aagcttgttaccaaatacgtcacgttttcatctaacgaacttataagctaatccaacaaactataagctagcttt 8879382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 12764850 - 12764792
Alignment:
Q  104 attggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    ||||||||||||| |||| || ||||||||||||| | |||||||| ||||||||||||    
T  12764850 attggaagaaaatataaaaagatatcagctataagctcaaaagctacttgaaatagctt 12764792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 34435982 - 34436056
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  34435982 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttt 34436056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 41991691 - 41991765
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  41991691 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttt 41991765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 45356425 - 45356491
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataag 243  Q
    ||||| ||||| ||||||||||  |||| ||||||||||||||||| ||  | ||||||||||||||    
T  45356425 aagcttgttactaaatacatcacattttgatccaacaagcttataagctaattcaacaagctataag 45356491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 9558867 - 9558936
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||| ||||||||| || ||| |||||| |||||| ||||||||| ||  || ||||||||||||||||    
T  9558867 aagcttgttaccaaacacgtcacgttttcttccaacgagcttataagctaatctaacaagctataagcta 9558936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 12122921 - 12122962
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||| || |||||||||||||||||||| ||||    
T  12122921 aacaagcttataagctagtccaacaagctataagctagcttt 12122962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 32111600 - 32111641
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||| || |||||||||||||||||||| ||||    
T  32111600 aacaagcttataagctagtccaacaagctataagctagcttt 32111641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 50938155 - 50938216
Alignment:
Q  104 attggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctc 164  Q
    ||||||||||||| || | | |||||||||||||| | |||||||| |||||||||||||||    
T  50938155 attggaagaaaatatataaaactatcagctataagctcaaaagctacttgaaatagcttctc 50938216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 51063088 - 51063031
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||  |||||||||| ||||||||||||    
T  51063088 ttggaagaaaatataaaaagctaccagctataaactaaaaagctatttgaaatagctt 51063031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 52184748 - 52184805
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| || |||||||||    
T  52184748 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttaaaatagctt 52184805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 52959384 - 52959315
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||| ||||||||| || ||| ||||||||||||| |||||||||  |  |||||||| ||||||||||    
T  52959384 aagcttgttaccaaacacgtcacgttttcatccaacgagcttataagttaatccaacaaactataagcta 52959315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 7041789 - 7041753
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||||||||||| || ||||||||||||||||||||    
T  7041789 aacaagcttataagctagtccaacaagctataagcta 7041753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 17666888 - 17666820
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||| || ||| ||||||||||||| |||||||||  |  ||||| ||||||||||||| ||||    
T  17666888 gttaccaaacacgtcacgttttcatccaacgagcttataagttaatccaataagctataagctagcttt 17666820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 22978138 - 22978102
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||||||||||| || ||||||||||||||||||||    
T  22978138 aacaagcttataagctagtccaacaagctataagcta 22978102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 42167372 - 42167408
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||||||||||| || ||||||||||||||||||||    
T  42167372 aacaagcttataagctagtccaacaagctataagcta 42167408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 43860785 - 43860749
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||||||||||| || ||||||||||||||||||||    
T  43860785 aacaagcttataagctagtccaacaagctataagcta 43860749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 48051080 - 48051012
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||| || ||| ||||||||| ||| |||||||||  |  ||||||||||||||||||| ||||    
T  48051080 gttaccaaacacgtcacgttttcatctaacgagcttataagttaatccaacaagctataagctagcttt 48051012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 48072035 - 48071999
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||||||||||| || ||||||||||||||||||||    
T  48072035 aacaagcttataagctagtccaacaagctataagcta 48071999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 50938277 - 50938317
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaactt 250  Q
    |||||| |||||| || ||||||||||||||||||||||||    
T  50938277 aacaaggttataagctagtccaacaagctataagctaactt 50938317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 97 - 246
Target Start/End: Complemental strand, 53431816 - 53431653
Alignment:
Q  97 ggttattattggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctcnnnnnnnnctataagctc------------- 182  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||| |||||||||        ||||||||||                 
T  53431816 ggttattattggaagaaaatgtaaaaagctatcagctataagctaaaaagctacttgaattagcttctcaagaaaagctataagctcgtgagaaaagttt 53431717  T
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||||||| |||||||||||||||||||||| ||||||| || ||||||||||||||||||||    
T  53431716 gttaccaaacacatcatgttttcatccaacaaacttataagctagtccaacaagctataagcta 53431653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 30653298 - 30653372
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||    
T  30653298 aagcttgttaccaaacacatcatgttttcatccaacaagcttataagctagtccaacaagccataagctaacttt 30653372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 55495102 - 55495170
Alignment:
Q  97 ggttattattggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctc 164  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||    
T  55495102 ggttattattggaagaaaatgtaaaaagctatcagctataagttaaaaagctacttgaaatagcttctc 55495170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 251
Target Start/End: Original strand, 55496061 - 55496118
Alignment:
Q  194 catcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  55496061 catcatgttttcatccaacaagcttataagctagtccaacaagctataagctaacttt 55496118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 55495018 - 55495066
Alignment:
Q  13 gagaagagaaaaacaaaacgtgagtgagtgggacggttgatttgtttac 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  55495018 gagaagagaaaaacaaaacgtgagtgagtgggacggttgatttgtttac 55495066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 24152761 - 24152699
Alignment:
Q  184 ttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagcta 246  Q
    |||||||| |||||| ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  24152761 ttaccaaacacatcacgttttcatccaactagcttataaactagtccaacaagctataagcta 24152699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 40674833 - 40674765
Alignment:
Q  184 ttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagc-tataagctaacttt 251  Q
    |||||||| ||||||||||||||||||| |||||||||| || ||||||||||| ||||||||||||||    
T  40674833 ttaccaaacacatcatgttttcatccaataagcttataagctagtccaacaagcttataagctaacttt 40674765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 47633851 - 47633925
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| ||||||||| ||| ||||||||| ||  ||||||||||||||||||||||||    
T  47633851 aagcttgttaccaaacacgtcacgttttcatctaacgagcttataagctaatccaacaagctataagctaacttt 47633925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 51941189 - 51941126
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||||||| | |||||||||| ||||||||| |||||||  | ||||||||||||||||||||    
T  51941189 gttaccaaacatatcatgttttgatccaacaaacttataagttagtccaacaagctataagcta 51941126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 6238280 - 6238206
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| ||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  6238280 aagcttgttaccaaacacgtcacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttt 6238206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 25687165 - 25687107
Alignment:
Q  104 attggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    ||||||||||||| |||| |||||||||||||||| | |||||||| ||||||||||||    
T  25687165 attggaagaaaatataaaaagctatcagctataagttcaaaagctacttgaaatagctt 25687107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 6238366 - 6238309
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  6238366 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 6238309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 7141075 - 7141124
Alignment:
Q  116 tgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctc 164  Q
    |||||| |||||||||||||||| |||||||||| |||||||||||||||    
T  7141075 tgtaaaaagctatcagctataagttaaaaagctacttgaaatagcttctc 7141124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 19801784 - 19801841
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  19801784 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 19801841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 37114355 - 37114412
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  37114355 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 37114412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 210 - 251
Target Start/End: Complemental strand, 38005604 - 38005563
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| |||||||||| |||||||||||||||||||||||||    
T  38005604 aacaaacttataaactagtccaacaagctataagctaacttt 38005563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 47633765 - 47633822
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  47633765 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 47633822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 49335112 - 49335169
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  49335112 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 49335169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 55001669 - 55001722
Alignment:
Q  109 aagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||| |||| |||||||||||||||| |||||||||| ||||||||||||    
T  55001669 aagaaaatataaaaagctatcagctataagttaaaaagctatttgaaatagctt 55001722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 6287923 - 6287855
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||| |||||| |||||||||||| || ||||||| ||  || || ||||||||||||||||||    
T  6287923 gttaccaaacacatcacgttttcatccaataaacttataagctaatctaagaagctataagctaacttt 6287855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 55001757 - 55001820
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||||||| ||| || ||||||||| ||| ||||||||| ||  |||||||||||||||||||    
T  55001757 gttaccaaacacaccacgttttcatctaacgagcttataagctaatccaacaagctataagcta 55001820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 6288016 - 6287958
Alignment:
Q  104 attggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    ||||||||||||| |||| ||||| |||||||||| | |||||||| ||||||||||||    
T  6288016 attggaagaaaatataaaaagctaccagctataagctcaaaagctacttgaaatagctt 6287958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 19801018 - 19800944
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| ||  || ||||||||  ||| ||||||||| ||  ||||||||||||||||||||||||    
T  19801018 aagcttgttaccaaacacgccacgttttcatgtaacgagcttataagctaatccaacaagctataagctaacttt 19800944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 19801870 - 19801944
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  19801870 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttt 19801944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 33984180 - 33984106
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| ||||||||| ||| ||||||||| ||  | ||||||||||||||||| ||||    
T  33984180 aagcttgttaccaaacacgtcacgttttcatctaacgagcttataagctaattcaacaagctataagctagcttt 33984106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 39840202 - 39840276
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| ||  || ||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  39840202 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttt 39840276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Complemental strand, 40685864 - 40685822
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaact 225  Q
    ||||||||| |||||||||||||||||||| | ||||||||||    
T  40685864 gttaccaaacacatcatgttttcatccaacgaacttataaact 40685822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 53284099 - 53284025
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  53284099 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttt 53284025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Complemental strand, 19912732 - 19912691
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||| || |||||||||||||||||||| ||||    
T  19912732 aacaagcttataagctagtccaacaagctataagctagcttt 19912691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 25687078 - 25687033
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataa 222  Q
    ||||| ||||||||| |||||| |||||||| ||||||||||||||    
T  25687078 aagcttgttaccaaacacatcacgttttcatacaacaagcttataa 25687033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 243
Target Start/End: Complemental strand, 27531889 - 27531856
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataag 243  Q
    |||||||||||||||| |||||||||||||||||    
T  27531889 aacaagcttataaactagtccaacaagctataag 27531856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 30411292 - 30411333
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||| || |||||||||||||||||||| ||||    
T  30411292 aacaagcttataagctagtccaacaagctataagctagcttt 30411333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 32012725 - 32012668
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| ||| |||||| |||||||||| ||||||||||||    
T  32012725 ttggaagaaaatataaaaagctaccaggtataagctaaaaagctacttgaaatagctt 32012668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 40685955 - 40685910
Alignment:
Q  106 tggaagaaaatgtaaagagctatcagctataagataaaaagctatt 151  Q
    ||||||||||| |||| ||||| |||||||||| ||||||||||||    
T  40685955 tggaagaaaatataaaaagctaccagctataaggtaaaaagctatt 40685910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 43374687 - 43374618
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||| ||||||||| ||  || ||||||||| ||| ||||||||| ||  |||||||||||||||||||    
T  43374687 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataagcta 43374618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 157
Target Start/End: Complemental strand, 44448625 - 44448572
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaata 157  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||    
T  44448625 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaata 44448572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 53284185 - 53284128
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||| | |||||||||| |||||||||| ||||||||||||    
T  53284185 ttggaagaaaatataaaaagcaaccagctataagctaaaaagctacttgaaatagctt 53284128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 54683689 - 54683620
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||| ||||||||| || ||| ||||||||||||| ||||||||| ||  || |||||| |||||||||    
T  54683689 aagcttgttaccaaacacgtcacgttttcatccaacgagcttataagctaatctaacaagttataagcta 54683620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 7113629 - 7113665
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||||||||||| || ||||||||||||||||||||    
T  7113629 aacaagcttataagctagtccaacaagctataagcta 7113665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 37498289 - 37498229
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataag 243  Q
    ||||||||| || ||| ||||||||||||| ||||||||| ||  |||||||| |||||||    
T  37498289 gttaccaaacacgtcacgttttcatccaacgagcttataagctaatccaacaaactataag 37498229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 48953089 - 48953053
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||||||||||| || ||||||||||||||||||||    
T  48953089 aacaagcttataagctagtccaacaagctataagcta 48953053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 49648860 - 49648896
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||||||||||| || ||||||||||||||||||||    
T  49648860 aacaagcttataagctagtccaacaagctataagcta 49648896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 251
Target Start/End: Original strand, 2773496 - 2773664
Alignment:
Q  97 ggttattattggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctcnnnnnnnnctataagctcgt----------- 184  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||         |||||||||||               
T  2773496 ggttattattggaagaaaatgtaaaaagctatcagctataagctaaaaagctacttgaaatagcttctcaaaaaaagttataagctcgtgagaaaagctt 2773595  T
Q  185 --taccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
      ||||||  || ||| ||||||||||||||||||||||| || |||||||||||||||||||| ||||    
T  2773596 gttaccaagcacgtcacgttttcatccaacaagcttataagctagtccaacaagctataagctagcttt 2773664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 105 - 251
Target Start/End: Complemental strand, 39733891 - 39733744
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctcnnnnnnnnctataagctcgttaccaaatacatcatgttt 203  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| |||||||||||| ||        ||||||||| ||||||||| ||| || ||||    
T  39733891 ttggaagaaaatataaaaagctaccagctataagctaaaaagctatttgaaatagcttttcaaaaaacgctataagcttgttaccaaacacaccacgttt 39733792  T
Q  204 tcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||| ||||||||| ||  ||||||||| ||||||||| ||||    
T  39733791 tcatctaacgagcttataagctaatccaacaaggtataagctagcttt 39733744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 3512557 - 3512489
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||  ||||| ||||||||||||| ||||    
T  3512557 gttaccaaacacatcacgttttcatccaacaagcttataagctaatccaagaagctataagctagcttt 3512489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 20697513 - 20697587
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || | ||||||||||| ||| ||||||||| ||  ||||||||||||||||||||||||    
T  20697513 aagcttgttaccaaacacgttatgttttcatctaacgagcttataagctaatccaacaagctataagctaacttt 20697587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 25100136 - 25100193
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| |||||||||||||||| |||||||||| ||||||||||||    
T  25100136 ttggaagaaaatataaaaagctatcagctataagctaaaaagctacttgaaatagctt 25100193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 34903401 - 34903454
Alignment:
Q  193 acatcatgttttcatccaacaagcttataaactggtccaacaagctataagcta 246  Q
    |||||||||||||||||||||||||||||| || |||||||||| | |||||||    
T  34903401 acatcatgttttcatccaacaagcttataagctagtccaacaaggtgtaagcta 34903454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 35397940 - 35397997
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| |||||||||||||||| |||||||||| ||||||||||||    
T  35397940 ttggaagaaaatataaaaagctatcagctataagctaaaaagctacttgaaatagctt 35397997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 36859314 - 36859246
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    |||||||||||  ||| ||||||||| ||| ||||||||| ||  ||||||||||||||||||||||||    
T  36859314 gttaccaaataggtcacgttttcatctaacgagcttataagctaatccaacaagctataagctaacttt 36859246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 22215203 - 22215129
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| ||  || ||||||||| ||| ||||||||| ||  ||||||||||||||||||||||||    
T  22215203 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataagctaacttt 22215129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 24804494 - 24804568
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| ||||||  |||||||||||||||||||||  ||  ||||| ||||||||||||| ||||    
T  24804494 aagcttgttaccaaacacatcacattttcatccaacaagcttataggctaatccaagaagctataagctagcttt 24804568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 5574780 - 5574723
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  5574780 ttggaagaaaatataaaaagctaccagctataagctaaaaagctatttgaaatagctt 5574723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 17121993 - 17121936
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  17121993 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 17121936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 20697427 - 20697484
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  20697427 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 20697484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 25100424 - 25100367
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  25100424 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 25100367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 35160191 - 35160248
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||| | |||| |||||||||||||||| |||||||||| ||||||||||||    
T  35160191 ttggaagaaagtataaaaagctatcagctataagctaaaaagctacttgaaatagctt 35160248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 38746878 - 38746935
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  38746878 ttggaagaaaatataaaaagctaccagctataagttaaaaagctacttgaaatagctt 38746935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 40529679 - 40529622
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  40529679 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 40529622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 43800690 - 43800747
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  43800690 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 43800747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 16786544 - 16786604
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataag 243  Q
    ||||||||| |||||| |||||||| |||||||||||||| ||  ||||| ||||||||||    
T  16786544 gttaccaaacacatcacgttttcattcaacaagcttataagctaatccaagaagctataag 16786604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 38364511 - 38364547
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagcta 246  Q
    |||||||||||||||| ||||||||||||||||||||    
T  38364511 aacaagcttataaactagtccaacaagctataagcta 38364547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 41355697 - 41355634
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||||||| |||||| ||||||||||||||| ||||||| ||  |||||  ||||||||||||    
T  41355697 gttaccaaacacatcacgttttcatccaacaaacttataagctaatccaaggagctataagcta 41355634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 16786451 - 16786509
Alignment:
Q  104 attggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    ||||||||||||| |||| ||||| |||||||||| | |||||||| ||||||||||||    
T  16786451 attggaagaaaatataaaaagctaccagctataagctcaaaagctagttgaaatagctt 16786509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 43800776 - 43800850
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  43800776 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttt 43800850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 4477659 - 4477700
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||| || |||||||||||||||||||||||||    
T  4477659 aacaaacttataatctagtccaacaagctataagctaacttt 4477700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 5838434 - 5838377
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||| | |||||||||| |||||||||| ||||||||||||    
T  5838434 ttggaagaaaatataaaaagccaccagctataagctaaaaagctacttgaaatagctt 5838377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Complemental strand, 12208865 - 12208824
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||| || |||||||||||||||||||| ||||    
T  12208865 aacaagcttataagctagtccaacaagctataagctagcttt 12208824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Complemental strand, 12453293 - 12453252
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||| || |||||||||||||||||||| ||||    
T  12453293 aacaagcttataagctagtccaacaagctataagctagcttt 12453252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 14911943 - 14911886
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| | ||| |||||||||| |||||||||| ||||||||||||    
T  14911943 ttggaagaaaatataaaaaactaccagctataagctaaaaagctacttgaaatagctt 14911886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Complemental strand, 18146401 - 18146360
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||| || |||||||||||||||||||| ||||    
T  18146401 aacaagcttataagctagtccaacaagctataagctagcttt 18146360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 35057308 - 35057377
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||| ||||||||| || ||| |||| |||||||| ||||||||| ||  || ||||||||||||||||    
T  35057308 aagcttgttaccaaacacgtcacgtttgcatccaacgagcttataagctaatctaacaagctataagcta 35057377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Complemental strand, 41356349 - 41356308
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||| || ||||||||||||||| |||||||||    
T  41356349 aacaagcttataagctagtccaacaagctatatgctaacttt 41356308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Complemental strand, 43150311 - 43150270
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||| || |||||||||||||||||||| ||||    
T  43150311 aacaagcttataagctagtccaacaagctataagctagcttt 43150270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 45069859 - 45069900
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||| || |||||||||||||||||||| ||||    
T  45069859 aacaagcttataagctagtccaacaagctataagctagcttt 45069900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 29725800 - 29725764
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||||||||||| || ||||||||||||||||||||    
T  29725800 aacaagcttataagctagtccaacaagctataagcta 29725764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 31642789 - 31642825
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||||||||||| || ||||||||||||||||||||    
T  31642789 aacaagcttataatctagtccaacaagctataagcta 31642825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 35019546 - 35019510
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||||||||||| || ||||||||||||||||||||    
T  35019546 aacaagcttataagctagtccaacaagctataagcta 35019510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 6e-18; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 41865379 - 41865305
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||| ||  ||||| ||||||||||||| ||||    
T  41865379 aagctcgttaccaaacacatcacgttttcatccaacaagcttataagctaatccaagaagctataagctagcttt 41865305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 28343873 - 28343808
Alignment:
Q  99 ttattattggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttct 163  Q
    ||||||||||||||||||||||| |||||||||||||||  |||||||||| ||||||||||||||    
T  28343873 ttattattggaagaaaatgtaaaaagctatcagctataatctaaaaagctatttgaaatagcttct 28343808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 2459653 - 2459727
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| |||||| |||||||||||| |||||||||| ||  ||||||||||||||||||| ||||    
T  2459653 aagcttgttaccaaacacatcacgttttcatccaataagcttataagctaatccaacaagctataagctagcttt 2459727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 38058841 - 38058767
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| |||||| ||||||| |||||||| |||||| || |||||||||||||||||||| ||||    
T  38058841 aagcttgttaccaaacacatcacgttttcaaccaacaaggttataagctagtccaacaagctataagctagcttt 38058767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 44277972 - 44278038
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataag 243  Q
    ||||| ||||||||| |||||| ||||||||||||| ||||||||| || |||||||||||||||||    
T  44277972 aagcttgttaccaaacacatcacgttttcatccaactagcttataagctagtccaacaagctataag 44278038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 2459568 - 2459627
Alignment:
Q  106 tggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctc 164  Q
    ||||||||||||| || |||||||||||||||| |||||||||| |||||||||||||||    
T  2459568 tggaagaaaatgtgaaaagctatcagctataagctaaaaagctacttgaaatagcttctc 2459627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 158
Target Start/End: Original strand, 31656301 - 31656362
Alignment:
Q  97 ggttattattggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatag 158  Q
    ||||||||||| ||||||||||||| |||||||||||||||| |||||||||| |||||||||    
T  31656301 ggttattattg-aagaaaatgtaaaaagctatcagctataagctaaaaagctacttgaaatag 31656362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 46742548 - 46742479
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||| |||||||||  ||||||||||||||||||||||||||||| ||  ||||| || ||||||||||    
T  46742548 aagcttgttaccaaacgcatcatgttttcatccaacaagcttataatctaatccaagaaactataagcta 46742479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 38058923 - 38058867
Alignment:
Q  109 aagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctc 164  Q
    |||||||||| || |||||||||||||||| |||||||||| |||||||||||||||    
T  38058923 aagaaaatgtgaaaagctatcagctataagctaaaaagctatttgaaatagcttctc 38058867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 11333019 - 11332961
Alignment:
Q  106 tggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttct 163  Q
    |||||||||||||||| ||| || ||||||||| |||||||||| ||||||||||||||    
T  11333019 tggaagaaaatgtaaaaagcaattagctataagctaaaaagctacttgaaatagcttct 11332961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 11491040 - 11490982
Alignment:
Q  106 tggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttct 163  Q
    |||||||||||||||| ||| || ||||||||| |||||||||| ||||||||||||||    
T  11491040 tggaagaaaatgtaaaaagcaattagctataagctaaaaagctacttgaaatagcttct 11490982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 46315695 - 46315769
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| ||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  46315695 aagcttgttaccaaacacgtcacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttt 46315769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 11823762 - 11823705
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  11823762 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 11823705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 27747785 - 27747728
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  27747785 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 27747728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 28314775 - 28314832
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  28314775 ttggaagaaaatataaaaagctaccagctataagttaaaaagctacttgaaatagctt 28314832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 28955476 - 28955533
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  28955476 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 28955533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 30358252 - 30358195
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  30358252 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 30358195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 47326505 - 47326562
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  47326505 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 47326562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 50586100 - 50586157
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  50586100 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 50586157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 12014728 - 12014660
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||| | ||| || ||||||||| ||| ||||||||||||  ||||||||| ||||||||||||||    
T  12014728 gttaccacacacaccacgttttcatctaacgagcttataaactaatccaacaagttataagctaacttt 12014660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 161
Target Start/End: Complemental strand, 25365937 - 25365881
Alignment:
Q  106 tggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    ||||||||||| |||| |||||||||||||||| |||||||||| ||||| ||||||    
T  25365937 tggaagaaaatataaaaagctatcagctataagctaaaaagctacttgaattagctt 25365881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 161
Target Start/End: Complemental strand, 33076781 - 33076725
Alignment:
Q  106 tggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    ||||||||||| |||| |||||||||||||||| |||||||||| ||||| ||||||    
T  33076781 tggaagaaaatataaaaagctatcagctataagctaaaaagctacttgaattagctt 33076725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 9423062 - 9423128
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataag 243  Q
    ||||| ||||||||| ||||||  |||| ||||||||||||||||| ||  | ||||||||||||||    
T  9423062 aagcttgttaccaaacacatcacattttgatccaacaagcttataagctaattcaacaagctataag 9423128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 27747699 - 27747625
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| ||  || ||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  27747699 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttt 27747625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 28955562 - 28955628
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataag 243  Q
    ||||| ||||||||| |||||| ||||||||| ||| ||||||||| ||  || |||||||||||||    
T  28955562 aagcttgttaccaaacacatcacgttttcatctaacgagcttataagctaatctaacaagctataag 28955628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 30358166 - 30358092
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  30358166 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttt 30358092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 36739645 - 36739571
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||||| || ||| ||||||||| ||| |||||||||  |  |||||||| |||||| ||||||||    
T  36739645 aagctcgttaccaaacacgtcacgttttcatctaacgagcttataagttaatccaacaaactataaactaacttt 36739571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 39325703 - 39325629
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  39325703 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttt 39325629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 41865466 - 41865408
Alignment:
Q  104 attggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    ||||||||||||| |||| ||||| |||||||||| | |||||||| ||||||||||||    
T  41865466 attggaagaaaatataaaaagctaccagctataagctcaaaagctacttgaaatagctt 41865408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 50586186 - 50586260
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| ||  || ||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  50586186 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttt 50586260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 3796004 - 3796045
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||| || |||||||||||||||||||| ||||    
T  3796004 aacaagcttataagctagtccaacaagctataagctagcttt 3796045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 4638571 - 4638510
Alignment:
Q  104 attggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctc 164  Q
    ||||||||||||| |||| |  ||||||||||||| | |||||||| |||||||||||||||    
T  4638571 attggaagaaaatataaaaaattatcagctataagctcaaaagctagttgaaatagcttctc 4638510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Complemental strand, 5698185 - 5698144
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||| || |||||||||||||||||||| ||||    
T  5698185 aacaagcttataagctagtccaacaagctataagctagcttt 5698144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 12014820 - 12014763
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| ||||||||||  |||||||||||    
T  12014820 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacctgaaatagctt 12014763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Complemental strand, 14390481 - 14390440
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||| || |||||||||||||||||||| ||||    
T  14390481 aacaagcttataagctagtccaacaagctataagctagcttt 14390440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 39325789 - 39325732
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| |||| |||||||    
T  39325789 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgatatagctt 39325732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 4640133 - 4640169
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||||||||||| || ||||||||||||||||||||    
T  4640133 aacaagcttataagctagtccaacaagctataagcta 4640169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 250
Target Start/End: Complemental strand, 23259144 - 23259104
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaactt 250  Q
    ||||| ||||||| || ||||||||||||||||||||||||    
T  23259144 aacaaacttataagctagtccaacaagctataagctaactt 23259104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 44109972 - 44110008
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||||||||||| || ||||||||||||||||||||    
T  44109972 aacaagcttataagctagtccaacaagctataagcta 44110008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 44299984 - 44300020
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||||||||||| || ||||||||||||||||||||    
T  44299984 aacaagcttataagctagtccaacaagctataagcta 44300020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 45900255 - 45900187
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||| |||||| |||||| || ||| ||||||||| ||  ||||||||||||||| ||| ||||    
T  45900255 gttaccaaacacatcacgttttcttctaacgagcttataagctaatccaacaagctataaactagcttt 45900187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 149
Target Start/End: Complemental strand, 45900347 - 45900303
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta 149  Q
    |||||||||||| |||| ||||| |||||||||| ||||||||||    
T  45900347 ttggaagaaaatataaaaagctaccagctataagctaaaaagcta 45900303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 6432262 - 6432193
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||| ||||||||| |||||| ||||||||||||| ||||||||| || ||||||||||||||||||||    
T  6432262 aagcttgttaccaaacacatcacgttttcatccaactagcttataagctagtccaacaagctataagcta 6432193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 10361478 - 10361411
Alignment:
Q  184 ttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    |||||||| |||||||||||||||||||  ||||||||| || |||||||||||||||||||| ||||    
T  10361478 ttaccaaacacatcatgttttcatccaatgagcttataagctagtccaacaagctataagctagcttt 10361411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 242
Target Start/End: Complemental strand, 45377001 - 45376936
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataa 242  Q
    ||||| ||||||||| |||||| ||||||||||||| ||||||||| || ||||||||||||||||    
T  45377001 aagcttgttaccaaacacatcacgttttcatccaactagcttataagctagtccaacaagctataa 45376936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 251
Target Start/End: Original strand, 11017966 - 11018113
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctcnnnnnnnnctataagctcgttaccaaatacatcatgttt 203  Q
    |||||| ||||| |||| ||||   ||||||||| |||||| ||| |||||||||||| ||        ||||||||||||||||||| ||  || ||||    
T  11017966 ttggaataaaatataaaaagctgctagctataagctaaaaaactacttgaaatagcttttcaaaaaacgctataagctcgttaccaaacacgccacgttt 11018065  T
Q  204 tcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  11018066 tcatctaacgagcttataagctaatccaacaagctataagctagcttt 11018113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 42097919 - 42097993
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| |||||| |||||||||||| |||||||||| ||  ||||| ||||||||||||| ||||    
T  42097919 aagcttgttaccaaacacatcacgttttcatccaataagcttataagctaatccaagaagctataagctagcttt 42097993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 43568455 - 43568381
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| ||||||||||||| ||||||||| ||  |||||||||||||||| |||||||    
T  43568455 aagcttgttaccaaacacgtcacgttttcatccaacgagcttataagctaatccaacaagctataagttaacttt 43568381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 8875765 - 8875691
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| ||||||||| ||| ||||||||| ||  ||||||||| ||||||||||||||    
T  8875765 aagcttgttaccaaacacgtcacgttttcatctaacgagcttataagctaatccaacaagttataagctaacttt 8875691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 36936080 - 36936154
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| ||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  36936080 aagcttgttaccaaacacgtcacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttt 36936154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 1875954 - 1876011
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  1875954 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 1876011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 5774271 - 5774214
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  5774271 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 5774214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 7454710 - 7454653
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  7454710 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 7454653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 8875851 - 8875794
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  8875851 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 8875794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 12160835 - 12160892
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  12160835 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 12160892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 242
Target Start/End: Complemental strand, 14958212 - 14958147
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataa 242  Q
    ||||| ||||||||| || ||| ||||||||| ||| ||||||||||||  |||||||||||||||    
T  14958212 aagcttgttaccaaacacgtcacgttttcatctaacgagcttataaactaatccaacaagctataa 14958147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 14958298 - 14958241
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  14958298 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 14958241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 34245424 - 34245367
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||| ||| |||| |||||||||||||||| |||||||||| ||||||||||||    
T  34245424 ttggaagacaatataaaaagctatcagctataagttaaaaagctacttgaaatagctt 34245367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 39241082 - 39241139
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  39241082 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 39241139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 39241174 - 39241242
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||| || ||| ||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  39241174 gttaccaaacacgtcacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttt 39241242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 16496646 - 16496697
Alignment:
Q  200 gttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||| ||| ||||||||||||  ||||||||||||||||||| ||||    
T  16496646 gttttcatctaacgagcttataaactaatccaacaagctataagctagcttt 16496697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 10361570 - 10361512
Alignment:
Q  106 tggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttct 163  Q
    |||||||||||||||| |  ||||||||||||| |||||| ||| ||||||||||||||    
T  10361570 tggaagaaaatgtaaaaaattatcagctataagctaaaaaactacttgaaatagcttct 10361512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 12160921 - 12160995
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  12160921 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttt 12160995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 30523701 - 30523627
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| ||  || ||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  30523701 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttt 30523627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 34245338 - 34245264
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| | | || ||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  34245338 aagcttgttaccaaacaaaccacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttt 34245264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 42519806 - 42519732
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| ||||||||| ||| ||||||||| ||  | ||||||||||||||||| ||||    
T  42519806 aagcttgttaccaaacacgtcacgttttcatctaacgagcttataagctaatgcaacaagctataagctagcttt 42519732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 7183322 - 7183363
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    |||||||||||||||| ||||||||| |||||||||| ||||    
T  7183322 aacaagcttataaactagtccaacaaactataagctagcttt 7183363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 10247423 - 10247464
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||| || ||||||||| |||||||||||||||    
T  10247423 aacaagcttataagctagtccaacaaactataagctaacttt 10247464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 16496537 - 16496594
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| ||||||||||  |||||||||||    
T  16496537 ttggaagaaaatttaaaaagctaccagctataagctaaaaagctacctgaaatagctt 16496594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 18109755 - 18109796
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||| || |||||||||||||||||||| ||||    
T  18109755 aacaagcttataagctagtccaacaagctataagctagcttt 18109796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 36935994 - 36936051
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| | |||||||| |||||||||| ||||||||||||    
T  36935994 ttggaagaaaatataaaaagctacccgctataagctaaaaagctacttgaaatagctt 36936051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 38324416 - 38324359
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| ||| |||||| ||||||||||||    
T  38324416 ttggaagaaaatataaaaagctaccagctataagctaataagctacttgaaatagctt 38324359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 42519892 - 42519835
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||| ||| ||||||||||||    
T  42519892 ttggaagaaaatataaaaagctaccagctataagctaaaaaactacttgaaatagctt 42519835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 5774179 - 5774111
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||| ||  || ||||||||| ||||||||||||| ||  ||||||||||||||| ||| ||||    
T  5774179 gttaccaaacacgccacgttttcatctaacaagcttataagctaatccaacaagctataaactagcttt 5774111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 245
Target Start/End: Complemental strand, 7454624 - 7454556
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagct 245  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||    
T  7454624 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagct 7454556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 14452359 - 14452323
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||||||||||| || ||||||||||||||||||||    
T  14452359 aacaagcttataagctagtccaacaagctataagcta 14452323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 33179020 - 33178984
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||||||||||| || ||||||||||||||||||||    
T  33179020 aacaagcttataagctagtccaacaagctataagcta 33178984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 36600996 - 36600960
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||||||||||| || ||||||||||||||||||||    
T  36600996 aacaagcttataagctagtccaacaagctataagcta 36600960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 164
Target Start/End: Complemental strand, 981523 - 981455
Alignment:
Q  97 ggttattattggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctc 164  Q
    ||||||||||||||||||||||||| |||| ||| ||||||||||||| |||| |||||||||||||||    
T  981523 ggttattattggaagaaaatgtaaaaagctgtcaactataagataaaaggctacttgaaatagcttctc 981455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 46350849 - 46350917
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||| || ||||||||||||| ||| ||||||||||||  ||||||||||||||||||||||||    
T  46350849 gttaccaaacacgtcatgttttcatctaacgagcttataaactaatccaacaagctataagctaacttt 46350917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 21920803 - 21920872
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||| ||||||||| |||||| |||||||| |||| ||||||||| || ||||||||||||||||||||    
T  21920803 aagcttgttaccaaacacatcacgttttcattcaactagcttataagctagtccaacaagctataagcta 21920872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 6477012 - 6476944
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||  ||||| ||||||||||||| ||||    
T  6477012 gttaccaaacacatcacgttttcatccaacaagcttataagctaatccaagaagctataagctagcttt 6476944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 46534494 - 46534426
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||| | |||||| ||||||||||||||||||||||| ||  ||||||||||||||||||| ||||    
T  46534494 gttaccatacacatcacgttttcatccaacaagcttataagctaatccaacaagctataagctagcttt 46534426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 42997606 - 42997532
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| |||||| ||||||||||||| ||||||||| || ||||||||| ||||||  |||||||    
T  42997606 aagcttgttaccaaacacatcacgttttcatccaacgagcttataagctagtccaacaaactataaagtaacttt 42997532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 42997700 - 42997635
Alignment:
Q  97 ggttattattggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    ||||||||||||||||||||||||| || ||||||||||| | |||||||||| ||||| ||||||    
T  42997700 ggttattattggaagaaaatgtaaaaagttatcagctatatggtaaaaagctacttgaattagctt 42997635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 14792130 - 14792197
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaactt 250  Q
    ||||||||| |||||| ||||| ||||||| ||||||||| ||  || ||||||||||||||||||||    
T  14792130 gttaccaaacacatcacgttttaatccaacgagcttataagctaatctaacaagctataagctaactt 14792197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 3370541 - 3370467
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| |||||| ||||||||||||||| ||||||||||  ||||| || ||||||  |||||||    
T  3370541 aagcttgttaccaaacacatcacgttttcatccaacaaacttataaactaatccaaaaaactataaattaacttt 3370467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 46349891 - 46349965
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    |||||| |||||||| | || |||||||||||||||||||||||||  |  ||||| ||||||||||||| ||||    
T  46349891 aagctcattaccaaacatattatgttttcatccaacaagcttataagttaatccaagaagctataagctagcttt 46349965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 25696125 - 25696056
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||| ||||||||| || ||| ||||||||||||| ||||||||| ||  || ||||||||||||||||    
T  25696125 aagcttgttaccaaacacgtcacgttttcatccaacgagcttataagctaatctaacaagctataagcta 25696056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 27826887 - 27826830
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  27826887 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 27826830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 28235377 - 28235308
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||| ||||||||| || ||| ||||||||||||| ||||||||| ||  |||||||| ||||||||||    
T  28235377 aagcttgttaccaaacacgtcacgttttcatccaacgagcttataagctaatccaacaaactataagcta 28235308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 28958043 - 28958100
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  28958043 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 28958100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 35647594 - 35647537
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagct-attgaaatagctt 161  Q
    |||||||||||| |||| |||||||||||||||| |||||||||  ||||||||||||    
T  35647594 ttggaagaaaatataaaaagctatcagctataagctaaaaagctgcttgaaatagctt 35647537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 42328085 - 42328142
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  42328085 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 42328142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 46536300 - 46536243
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  46536300 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 46536243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 42265286 - 42265354
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||| || ||| ||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  42265286 gttaccaaacacgtcacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttt 42265354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 43158206 - 43158274
Alignment:
Q  184 ttaccaaatacatcatgttttcatccaacaagcttataaactggtccaaca-agctataagctaacttt 251  Q
    |||||||| |||||| ||||||||||||| ||||||||||||  || |||| || ||||||||||||||    
T  43158206 ttaccaaacacatcacgttttcatccaacgagcttataaactaatctaacagagatataagctaacttt 43158274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 44103926 - 44103886
Alignment:
Q  21 aaaaacaaaacgtgagtgagtgggacggttgatttgtttac 61  Q
    ||||||||||||||| ||||||||||||||| |||||||||    
T  44103926 aaaaacaaaacgtgaatgagtgggacggttgctttgtttac 44103886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 251
Target Start/End: Complemental strand, 981418 - 981355
Alignment:
Q  188 caaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    |||| |||||| |||||||| |||| ||||||||| ||  |||||||| |||||||||||||||    
T  981418 caaacacatcacgttttcattcaactagcttataagctaatccaacaaactataagctaacttt 981355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 149
Target Start/End: Original strand, 30523876 - 30523919
Alignment:
Q  106 tggaagaaaatgtaaagagctatcagctataagataaaaagcta 149  Q
    ||||| |||||||||| |||||||||||||||| ||||||||||    
T  30523876 tggaataaaatgtaaaaagctatcagctataagctaaaaagcta 30523919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 30523967 - 30524030
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||||| | |||||| ||||||||||||||||||||| |  |  |||||||||||||||||||    
T  30523967 gttaccatacacatcacgttttcatccaacaagcttatgagttaatccaacaagctataagcta 30524030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 48935321 - 48935258
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||||||| || ||| ||||  ||||||| ||||||||||||  |||||||||||||||||||    
T  48935321 gttaccaaacacgtcacgtttctatccaacgagcttataaactaatccaacaagctataagcta 48935258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 3370628 - 3370570
Alignment:
Q  104 attggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    ||||||||||||| |||| ||||| |||||||||| | |||||||| ||||||||||||    
T  3370628 attggaagaaaatataaaaagctaccagctataagctcaaaagctacttgaaatagctt 3370570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 6243959 - 6243885
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||||| ||  || ||||||||| ||| ||||||||| ||  ||||||||||||||| ||| ||||    
T  6243959 aagctcgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataaactagcttt 6243885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 27826801 - 27826727
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  27826801 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttt 27826727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 28494283 - 28494357
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  28494283 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttt 28494357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 42329030 - 42329104
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| ||  || ||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  42329030 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttt 42329104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 46349804 - 46349862
Alignment:
Q  104 attggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    ||||||||||||| |||| ||||| |||||||||| | |||||||| ||||||||||||    
T  46349804 attggaagaaaatataaaaagctaccagctataagctcaaaagctacttgaaatagctt 46349862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 46350757 - 46350811
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatag 158  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| |||||||||    
T  46350757 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatag 46350811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 4060530 - 4060473
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| || || |||||||||| |||||||||| ||||||||||||    
T  4060530 ttggaagaaaatataaaaagttaccagctataagctaaaaagctacttgaaatagctt 4060473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 9806629 - 9806670
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||| || |||||||||||||||| ||||||||    
T  9806629 aacaagcttataagctagtccaacaagctataaactaacttt 9806670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 28494197 - 28494254
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| |||| |||||||    
T  28494197 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgatatagctt 28494254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 29994137 - 29994194
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| | ||| |||||||||| |||||||||| ||||||||||||    
T  29994137 ttggaagaaaatataaaaaactaccagctataagctaaaaagctacttgaaatagctt 29994194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Complemental strand, 30582730 - 30582689
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||| || |||||||||||||||||||| ||||    
T  30582730 aacaagcttataagctagtccaacaagctataagctagcttt 30582689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 31031815 - 31031872
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| ||| |||||| |||||||||| ||||||||||||    
T  31031815 ttggaagaaaatataaaaagctaccagttataagctaaaaagctacttgaaatagctt 31031872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 31226792 - 31226849
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||| ||| ||||||||||||    
T  31226792 ttggaagaaaatataaaaagctaccagctataagctaaaaaactacttgaaatagctt 31226849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 33979795 - 33979734
Alignment:
Q  104 attggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctc 164  Q
    ||||||||||||| |||| |  ||||||||||||| | |||||||| |||||||||||||||    
T  33979795 attggaagaaaatataaaaaagtatcagctataagctcaaaagctacttgaaatagcttctc 33979734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 35670394 - 35670435
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||| || |||||||||||||||||||| ||||    
T  35670394 aacaagcttataagctagtccaacaagctataagctagcttt 35670435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 37658155 - 37658196
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||| || |||||||||||||||||||| ||||    
T  37658155 aacaagcttataagctagtccaacaagctataagctagcttt 37658196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Complemental strand, 40061222 - 40061181
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||| || |||||||||||||||||||| ||||    
T  40061222 aacaagcttataagctagtccaacaagctataagctagcttt 40061181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 42328944 - 42329001
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| | ||| |||||||||| |||||||||| ||||||||||||    
T  42328944 ttggaagaaaatataaaaaactaccagctataagctaaaaagctacttgaaatagctt 42329001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 212 - 245
Target Start/End: Original strand, 42329597 - 42329630
Alignment:
Q  212 caagcttataaactggtccaacaagctataagct 245  Q
    |||||||||||||| |||||||||||||||||||    
T  42329597 caagcttataaactagtccaacaagctataagct 42329630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 43337811 - 43337754
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||| ||| ||||||||||||    
T  43337811 ttggaagaaaatataaaaagctaccagctataagctaaaaaactatttgaaatagctt 43337754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 46672684 - 46672627
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| || |||||| |||||| |||||||||| ||||||||||||    
T  46672684 ttggaagaaaatataaaaagttatcagttataagctaaaaagctacttgaaatagctt 46672627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 1602166 - 1602202
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||||||||||| || ||||||||||||||||||||    
T  1602166 aacaagcttataagctagtccaacaagctataagcta 1602202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 164
Target Start/End: Complemental strand, 44103850 - 44103782
Alignment:
Q  97 ggttattattggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctc 164  Q
    |||| |||||||||||||||||||| ||| ||||  |||||  ||||||| || |||||||||||||||    
T  44103850 ggttgttattggaagaaaatgtaaaaagccatcaattataaactaaaaaggtacttgaaatagcttctc 44103782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 7157505 - 7157579
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| |||||||||  ||||| |||||||||||||||||||||||  | |||||||||||||||||||| ||||    
T  7157505 aagcttgttaccaaacgcatcacgttttcatccaacaagcttataagttagtccaacaagctataagctagcttt 7157579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 35766651 - 35766577
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||| ||  ||||| ||||||||||||| ||||    
T  35766651 aagcttgttaccaaacacatcacgttttcatccaacaagcttataagctaatccaagaagctataagctagcttt 35766577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 36959767 - 36959717
Alignment:
Q  11 cagagaagagaaaaacaaaacgtgagtgagtgggacggttgatttgtttac 61  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  36959767 cagagaagaggaaaacaaaacgtgagtgagtgggacggttgctttgtttac 36959717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 164
Target Start/End: Complemental strand, 36959681 - 36959613
Alignment:
Q  97 ggttattattggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctc 164  Q
    ||||||||||||||||||||||||| ||||||||| |||||  ||||||| || |||||||||||||||    
T  36959681 ggttattattggaagaaaatgtaaaaagctatcagttataaactaaaaagttacttgaaatagcttctc 36959613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 2890896 - 2890955
Alignment:
Q  106 tggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctc 164  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||||||||| |||||    
T  2890896 tggaagaaaatgtaaaaagctatcagctataagctaaaaagctatttgaaatagtttctc 2890955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 251
Target Start/End: Complemental strand, 36959542 - 36959484
Alignment:
Q  193 acatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    |||||||||||||||||||||||||| |||||| ||  |||||||||||||||| ||||    
T  36959542 acatcatgttttcatccaacaagcttgtaaactagtttaacaagctataagctagcttt 36959484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 76592 - 76535
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| |||||||||||||||| |||||||||| ||||||||||||    
T  76592 ttggaagaaaatataaaaagctatcagctataagctaaaaagctacttgaaatagctt 76535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 5050113 - 5050178
Alignment:
Q  181 tcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||||||||| || ||| ||||||||||||| ||||||||| ||  |||||||||||||||||||    
T  5050113 tcgttaccaaacacgtcacgttttcatccaacgagcttataagctaatccaacaagctataagcta 5050178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 41734190 - 41734247
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| |||||||||||||||| |||||||||| ||||||||||||    
T  41734190 ttggaagaaaatataaaaagctatcagctataagctaaaaagctacttgaaatagctt 41734247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 251
Target Start/End: Original strand, 36944265 - 36944321
Alignment:
Q  195 atcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||||||||||||||||||  | ||| |||||||||||||||| ||||    
T  36944265 atcatgttttcatccaacaagcttataagttagtctaacaagctataagctagcttt 36944321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 17540347 - 17540280
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaactt 250  Q
    ||||||||| || ||| ||||| ||||||| ||||||||| ||  |||||||||||||||||||||||    
T  17540347 gttaccaaacacgtcacgttttaatccaacgagcttataagctaatccaacaagctataagctaactt 17540280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 6789621 - 6789695
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| ||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  6789621 aagcttgttaccaaacacgtcacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttt 6789695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 13359488 - 13359562
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| ||||||||| ||||||||||||| ||  |||||||||||||| |||| ||||    
T  13359488 aagcttgttaccaaacacgtcacgttttcatctaacaagcttataagctaatccaacaagctatatgctagcttt 13359562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 27813008 - 27813082
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| ||||||||| ||| ||||||||||||  | ||||||||||||||||| ||||    
T  27813008 aagcttgttaccaaacacgtcacgttttcatctaacgagcttataaactaattcaacaagctataagctagcttt 27813082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 34589933 - 34590007
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| ||  |||||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  34589933 aagcttgttaccaaacacgccatgttttcatctaacgagcttataagctaatccaacaagctataagctagcttt 34590007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 10815241 - 10815184
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  10815241 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 10815184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 15498823 - 15498766
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  15498823 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 15498766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 27812922 - 27812979
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| |||||||||||||||| ||||||| || ||||||||||||    
T  27812922 ttggaagaaaatataaaaagctatcagctataagctaaaaagttacttgaaatagctt 27812979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 29525242 - 29525299
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  29525242 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 29525299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 36761240 - 36761183
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  36761240 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 36761183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 37530666 - 37530723
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  37530666 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 37530723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 42709489 - 42709432
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  42709489 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 42709432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 5102716 - 5102779
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagcta 246  Q
    |||| |||| |||||||||||| ||||||||| ||||||| || ||||||||| ||||| ||||    
T  5102716 gttatcaaacacatcatgttttgatccaacaaacttataagctagtccaacaatctatacgcta 5102779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 24463603 - 24463564
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataa 222  Q
    |||||||||||||||||||||| ||||||||| |||||||    
T  24463603 gttaccaaatacatcatgttttgatccaacaaacttataa 24463564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 25881593 - 25881530
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||||||| || ||| ||||||||||||| ||||||||| ||  || ||||||||||||||||    
T  25881593 gttaccaaacacgtcacgttttcatccaacgagcttataagctaatctaacaagctataagcta 25881530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 246
Target Start/End: Original strand, 2890992 - 2891050
Alignment:
Q  188 caaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagcta 246  Q
    |||| ||||||  ||||||||||||||||||||||  | ||||||||| ||||||||||    
T  2890992 caaacacatcacattttcatccaacaagcttataagttagtccaacaaactataagcta 2891050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 7615009 - 7615075
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataag 243  Q
    ||||| ||||||||| ||  |||||||||||| ||| ||||||||| ||  ||||||||||||||||    
T  7615009 aagcttgttaccaaacacgccatgttttcatctaacgagcttataagctaatccaacaagctataag 7615075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 15498737 - 15498663
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  15498737 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttt 15498663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 16218315 - 16218389
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| ||  || ||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  16218315 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttt 16218389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 24171457 - 24171383
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| | ||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  24171457 aagcttgttaccaaacacgtcacgatttcatctaacgagcttataagctaatccaacaagctataagctagcttt 24171383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 29525328 - 29525402
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  29525328 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttt 29525402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 151
Target Start/End: Complemental strand, 35638942 - 35638896
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagctatt 151  Q
    |||||||||||| |||| |||||||||||||||| |||||| |||||    
T  35638942 ttggaagaaaatataaaaagctatcagctataagctaaaaaactatt 35638896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 37530752 - 37530826
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  37530752 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttt 37530826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 41734276 - 41734350
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| ||  || ||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  41734276 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttt 41734350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 42709403 - 42709329
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  42709403 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttt 42709329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 6789535 - 6789592
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| | ||| |||||||||| |||||||||| ||||||||||||    
T  6789535 ttggaagaaaatataaaaaactaccagctataagctaaaaagctacttgaaatagctt 6789592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 157
Target Start/End: Original strand, 7614923 - 7614976
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaata 157  Q
    ||||||| |||| |||| ||||| ||||||||||||||||||||| ||||||||    
T  7614923 ttggaagcaaatataaaaagctaccagctataagataaaaagctacttgaaata 7614976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 12280959 - 12280902
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| || |||||||||    
T  12280959 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttaaaatagctt 12280902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 12939803 - 12939860
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| | ||| |||||||||| |||||||||| ||||||||||||    
T  12939803 ttggaagaaaatataaaaaactaccagctataagttaaaaagctatttgaaatagctt 12939860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 12953753 - 12953810
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| | ||| |||||||||| |||||||||| ||||||||||||    
T  12953753 ttggaagaaaatataaaaaactaccagctataagctaaaaagctatttgaaatagctt 12953810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 13359402 - 13359459
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| ||||||| || ||||||||||||    
T  13359402 ttggaagaaaatataaaaagctaccagctataagctaaaaagttacttgaaatagctt 13359459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 17645398 - 17645329
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||| ||||||||| || ||| ||||||||||||| | ||||||| ||  || ||||||||||||||||    
T  17645398 aagcttgttaccaaacacgtcacgttttcatccaacgaacttataagctaatctaacaagctataagcta 17645329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 23590817 - 23590760
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||||||||| |||| ||||| |||| ||||||||||||    
T  23590817 ttggaagaaaatataaaaagctatcagctgtaagctaaaatgctacttgaaatagctt 23590760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 24171543 - 24171486
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| |||||  ||||||||| |||||||||| ||||||||||||    
T  24171543 ttggaagaaaatataaaaagctactagctataagttaaaaagctacttgaaatagctt 24171486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 34589847 - 34589904
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||| ||| ||||||||||||    
T  34589847 ttggaagaaaatataaaaagctaccagctataagctaaaaaactacttgaaatagctt 34589904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 42422987 - 42422930
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| | |||||||| |||||||||| ||||||||||||    
T  42422987 ttggaagaaaatataaaaagctaccggctataagctaaaaagctacttgaaatagctt 42422930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 251
Target Start/End: Original strand, 4559521 - 4559561
Alignment:
Q  211 acaagcttataaactggtccaacaagctataagctaacttt 251  Q
    |||||||||||| || |||||||||||||||||||| ||||    
T  4559521 acaagcttataagcttgtccaacaagctataagctagcttt 4559561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 20017346 - 20017382
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||||||||||| || ||||||||||||||||||||    
T  20017346 aacaagcttataagctagtccaacaagctataagcta 20017382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1391 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold1391
Description:

Target: scaffold1391; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 1420 - 1477
Alignment:
Q  108 gaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctc 164  Q
    |||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||    
T  1420 gaagaaaatgtaaaaaactatcagctataagataaaaagctacttgaaatagcttctc 1477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1391; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 1508 - 1568
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataag 243  Q
    ||||||||| |||||| ||||||||||||||||||||||| || || |||||| |||||||    
T  1508 gttaccaaacacatcacgttttcatccaacaagcttataagctagttcaacaaactataag 1568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 6833971 - 6834028
Alignment:
Q  108 gaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctc 164  Q
    |||||||||||||| | |||||||||||||| |||||||||| |||||||||||||||    
T  6833971 gaagaaaatgtaaaaaactatcagctataagttaaaaagctacttgaaatagcttctc 6834028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 6834059 - 6834119
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataag 243  Q
    ||||||||| |||||| ||||||||||||||||||||||| || || |||||| |||||||    
T  6834059 gttaccaaacacatcacgttttcatccaacaagcttataagctagttcaacaaactataag 6834119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 22707383 - 22707309
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||  || ||| ||||||||| ||| ||||||||||||  ||||||||||||||||||| ||||    
T  22707383 aagcttgttaccaatcacgtcacgttttcatctaacgagcttataaactaatccaacaagctataagctagcttt 22707309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 25023462 - 25023536
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| ||  || ||||||||| ||||||||||||| ||  ||||||||||||||||||| ||||    
T  25023462 aagcttgttaccaaacacgccacgttttcatctaacaagcttataagctaatccaacaagctataagctagcttt 25023536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 210 - 251
Target Start/End: Complemental strand, 190982 - 190941
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||||    
T  190982 aacaagcttataaactagtccaacaagctataaactaacttt 190941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 12130659 - 12130602
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  12130659 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 12130602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 20645836 - 20645779
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  20645836 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 20645779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 22707469 - 22707412
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  22707469 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 22707412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 24119160 - 24119217
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  24119160 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 24119217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 24119246 - 24119320
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||    
T  24119246 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttt 24119320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Complemental strand, 1789846 - 1789805
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||| || |||||||||||||||||||| ||||    
T  1789846 aacaagcttataagctagtccaacaagctataagctagcttt 1789805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 15508528 - 15508467
Alignment:
Q  104 attggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctc 164  Q
    ||||||||||||| |||| | ||||||| |||||| | |||||||| |||||||||||||||    
T  15508528 attggaagaaaatataaataactatcagttataagctcaaaagctacttgaaatagcttctc 15508467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 18368774 - 18368815
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||| || |||||||||||||||||||| ||||    
T  18368774 aacaagcttataagctagtccaacaagctataagctagcttt 18368815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 21459114 - 21459045
Alignment:
Q  177 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagcta 246  Q
    ||||| |||| |||| || ||| ||||||||||||| ||||||||| ||  || ||||||||||||||||    
T  21459114 aagcttgttatcaaacacgtcacgttttcatccaacgagcttataagctaatctaacaagctataagcta 21459045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 21778007 - 21778064
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| ||| |||||| |||||||||| ||||||||||||    
T  21778007 ttggaagaaaatataaaaagctaccagttataagctaaaaagctacttgaaatagctt 21778064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 25023376 - 25023433
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||| ||| ||||||||||||    
T  25023376 ttggaagaaaatataaaaagctaccagctataagctaaaaaactacttgaaatagctt 25023433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 12130567 - 12130499
Alignment:
Q  183 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||| ||  || ||||||||| |||||  |||||| ||  ||||||||||||||||||||||||    
T  12130567 gttaccaaacacgccacgttttcatctaacaaatttataagctaatccaacaagctataagctaacttt 12130499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 34574635 - 34574675
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaactt 250  Q
    ||||||||||||| || |||||||||| |||||||||||||    
T  34574635 aacaagcttataagctagtccaacaagttataagctaactt 34574675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 18554 - 18497
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  18554 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 18497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 7169 - 7112
Alignment:
Q  105 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 161  Q
    |||||||||||| |||| |||||  ||||||||| |||||||||| ||||||||||||    
T  7169 ttggaagaaaatataaaaagctactagctataagctaaaaagctacttgaaatagctt 7112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Complemental strand, 4208 - 4167
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||| || |||||||||||||||||||| ||||    
T  4208 aacaagcttataagctagtccaacaagctataagctagcttt 4167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Complemental strand, 11948 - 11907
Alignment:
Q  210 aacaagcttataaactggtccaacaagctataagctaacttt 251  Q
    ||||||||||||| || |||||||||||||||||||| ||||    
T  11948 aacaagcttataagctagtccaacaagctataagctagcttt 11907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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