View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4215_high_23 (Length: 244)
Name: NF4215_high_23
Description: NF4215
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4215_high_23 |
 |  |
|
| [»] chr3 (2 HSPs) |
 |  |
|
| [»] chr5 (19 HSPs) |
 |  |
|
Alignment Details
Target: chr3 (Bit Score: 156; Significance: 5e-83; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 85 - 244
Target Start/End: Original strand, 14552802 - 14552961
Alignment:
| Q |
85 |
tcaacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag |
184 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14552802 |
tcaacttaggaaatgaatgcttgatgctagaacaggtgattgctccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag |
14552901 |
T |
 |
| Q |
185 |
ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagatttga |
244 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14552902 |
ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagatttga |
14552961 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 14552650 - 14552732
Alignment:
| Q |
4 |
cacagaatcattatagtaattatagtagctggctttacccatgtattgcaaaccaatttggctgtcattcacgttcatcattc |
86 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14552650 |
cacagaatcattatagtaattatagtagctggctttacccatgtattgcaaaccaatttggctgtcattcacgttcatcattc |
14552732 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 124; Significance: 7e-64; HSPs: 19)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 85 - 244
Target Start/End: Original strand, 37702113 - 37702272
Alignment:
| Q |
85 |
tcaacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag |
184 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||||||| ||| ||||||||| |
|
|
| T |
37702113 |
tcaacttaggaaatgaatgcttggtgctagaacaagtgattgcaccatgaagatgatttgatcgtaaactcagcacctgtaactctggtaaagtttctag |
37702212 |
T |
 |
| Q |
185 |
ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagatttga |
244 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |
|
|
| T |
37702213 |
ccaattgggaaatgtatcctctatgttgttgtcaccaaggtccaatacttcaagatttga |
37702272 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 85 - 240
Target Start/End: Complemental strand, 37393607 - 37393452
Alignment:
| Q |
85 |
tcaacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag |
184 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||| ||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
37393607 |
tcaacttaggaaatggatgcttggtgctagaacatgtgattgacccatgaagatgatttgatcgtaaacttagcacctgtaactcttgtagagtttctag |
37393508 |
T |
 |
| Q |
185 |
ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagat |
240 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
37393507 |
ccaattgggaaaagtatcctctatgttgttgtcaccaaggtccaatacttcaagat |
37393452 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 85 - 239
Target Start/End: Original strand, 37532530 - 37532684
Alignment:
| Q |
85 |
tcaacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag |
184 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| ||||||||||| ||||||| |||||||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
37532530 |
tcaacttaggaaatgaatgcttggtgctagaacaagtgattgcaccatgaagattatttgatcgtaagcttagaacttgtaactcttgtagagtttctag |
37532629 |
T |
 |
| Q |
185 |
ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaaga |
239 |
Q |
| |
|
|||||| |||||||| ||||||||| |||||||||||||||| || ||||||||| |
|
|
| T |
37532630 |
ccaatttggaaatgtgtcctctatgttgttgtcaccaaggtccaaaacttcaaga |
37532684 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 85 - 239
Target Start/End: Original strand, 37593634 - 37593788
Alignment:
| Q |
85 |
tcaacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag |
184 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| ||||||||||| ||||||| |||||||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
37593634 |
tcaacttaggaaatgaatgcttggtgctagaacaagtgattgcaccatgaagattatttgatcgtaagcttagaacttgtaactcttgtagagtttctag |
37593733 |
T |
 |
| Q |
185 |
ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaaga |
239 |
Q |
| |
|
|||||| |||||||| ||||||||| |||||||||||||||| || ||||||||| |
|
|
| T |
37593734 |
ccaatttggaaatgtgtcctctatgttgttgtcaccaaggtccaaaacttcaaga |
37593788 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 85 - 239
Target Start/End: Original strand, 37696025 - 37696179
Alignment:
| Q |
85 |
tcaacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag |
184 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| ||||||||||| ||||||| |||||||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
37696025 |
tcaacttaggaaatgaatgcttggtgctagaacaagtgattgcaccatgaagattatttgatcgtaagcttagaacttgtaactcttgtagagtttctag |
37696124 |
T |
 |
| Q |
185 |
ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaaga |
239 |
Q |
| |
|
|||||| |||||||| ||||||||| |||||||||||||||| || ||||||||| |
|
|
| T |
37696125 |
ccaatttggaaatgtgtcctctatgttgttgtcaccaaggtccaaaacttcaaga |
37696179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 85 - 242
Target Start/End: Complemental strand, 37413895 - 37413738
Alignment:
| Q |
85 |
tcaacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag |
184 |
Q |
| |
|
||||||| ||||||| |||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
37413895 |
tcaacttgggaaatgtatgctttgtgctagaacaggtgattgcaccatgaagattatttgatcgtaaacttagcacctgtaactcttgtagagtttctag |
37413796 |
T |
 |
| Q |
185 |
ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagattt |
242 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| | |||||||||||| |
|
|
| T |
37413795 |
ccaattgggaaatgtatcctctatattgttgtcaccaaggtccagaacttcaagattt |
37413738 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 85 - 240
Target Start/End: Complemental strand, 37401728 - 37401573
Alignment:
| Q |
85 |
tcaacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag |
184 |
Q |
| |
|
||||||| ||||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||| ||| ||||||||| ||||||||||||| |
|
|
| T |
37401728 |
tcaacttgggaaatgtatgcttggtgctagaacaggtgattgcaccatgaagattatttgatcgtaaacttatcacctgtaactctggtagagtttctag |
37401629 |
T |
 |
| Q |
185 |
ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagat |
240 |
Q |
| |
|
||||| |||||||||||||| | | |||||||||||||||| || |||||||||| |
|
|
| T |
37401628 |
ccaatcaggaaatgtatcctcaacgttgttgtcaccaaggtccaaaacttcaagat |
37401573 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 85 - 240
Target Start/End: Original strand, 37639176 - 37639331
Alignment:
| Q |
85 |
tcaacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag |
184 |
Q |
| |
|
||||||| ||||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||| ||| ||||||||| ||||||||||||| |
|
|
| T |
37639176 |
tcaacttgggaaatgtatgcttggtgctagaacaggtgattgcaccatgaagattatttgatcgtaaacttatcacctgtaactctggtagagtttctag |
37639275 |
T |
 |
| Q |
185 |
ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagat |
240 |
Q |
| |
|
||||| |||||||||||||| | | |||||||||||||||| || |||||||||| |
|
|
| T |
37639276 |
ccaatcaggaaatgtatcctcaacgttgttgtcaccaaggtccaaaacttcaagat |
37639331 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 85 - 240
Target Start/End: Original strand, 37710934 - 37711089
Alignment:
| Q |
85 |
tcaacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag |
184 |
Q |
| |
|
||||||| ||||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||| ||| ||||||||| ||||||||||||| |
|
|
| T |
37710934 |
tcaacttgggaaatgtatgcttggtgctagaacaggtgattgcaccatgaagattatttgatcgtaaacttatcacctgtaactctggtagagtttctag |
37711033 |
T |
 |
| Q |
185 |
ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagat |
240 |
Q |
| |
|
||||| |||||||||||||| | | |||||||||||||||| || |||||||||| |
|
|
| T |
37711034 |
ccaatcaggaaatgtatcctcaacgttgttgtcaccaaggtccaaaacttcaagat |
37711089 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 85 - 240
Target Start/End: Original strand, 37823334 - 37823489
Alignment:
| Q |
85 |
tcaacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag |
184 |
Q |
| |
|
||||||| ||||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||| ||| ||||||||| ||||||||||||| |
|
|
| T |
37823334 |
tcaacttgggaaatgtatgcttggtgctagaacaggtgattgcaccatgaagattatttgatcgtaaacttatcacctgtaactctggtagagtttctag |
37823433 |
T |
 |
| Q |
185 |
ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagat |
240 |
Q |
| |
|
||||| |||||||||||||| | | |||||||||||||||| || |||||||||| |
|
|
| T |
37823434 |
ccaatcaggaaatgtatcctcaacgttgttgtcaccaaggtccaaaacttcaagat |
37823489 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 87 - 226
Target Start/End: Original strand, 37435142 - 37435281
Alignment:
| Q |
87 |
aacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctagcc |
186 |
Q |
| |
|
||||||| ||| | ||| ||| || ||||||||||||||| ||| | ||| | |||||||| |||||| || || ||||||||||||||||||||||||| |
|
|
| T |
37435142 |
aacttagaaaaaggatggttggtgttagaacaggtgattgaaccattaagtttatttgatcttaaactgagtacctgtaactcttgtagagtttctagcc |
37435241 |
T |
 |
| Q |
187 |
aattgggaaatgtatcctctatgctgttgtcaccaaggtc |
226 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
37435242 |
aattgggaaatgtatcctctatgttgttgtatccaaggtc |
37435281 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 85 - 235
Target Start/End: Complemental strand, 37383056 - 37382906
Alignment:
| Q |
85 |
tcaacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag |
184 |
Q |
| |
|
||||||| ||||||| ||| ||| ||||||| || |||||||| || ||||| | |||||||| |||||| ||||| ||||| |||||||||||||| || |
|
|
| T |
37383056 |
tcaacttgggaaatggatgtttggtgctagagcatgtgattgcgccatgaagtttatttgatcttaaactgagcacctgtaattcttgtagagtttcaag |
37382957 |
T |
 |
| Q |
185 |
ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttc |
235 |
Q |
| |
|
|||||||||||| |||||||||| | ||||||| |||||||| || ||||| |
|
|
| T |
37382956 |
ccaattgggaaaagtatcctctacgttgttgtctccaaggtccaaaacttc |
37382906 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 37393759 - 37393677
Alignment:
| Q |
4 |
cacagaatcattatagtaattatagtagctggctttacccatgtattgcaaaccaatttggctgtcattcacgttcatcattc |
86 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||| | |||||||| |
|
|
| T |
37393759 |
cacagaatcattatagtaattaaagtatctggctttacccatgtattgcaaaccaatttggctgttattcacatccatcattc |
37393677 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 37428348 - 37428412
Alignment:
| Q |
22 |
attatagtagctggctttacccatgtattgcaaaccaatttggctgtcattcacgttcatcattc |
86 |
Q |
| |
|
||||||||| |||| ||||||||||| ||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
37428348 |
attatagtaattggccttacccatgtactgcaaaccaatttggctatcattcacattcatcattc |
37428412 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 37532414 - 37532460
Alignment:
| Q |
40 |
acccatgtattgcaaaccaatttggctgtcattcacgttcatcattc |
86 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
37532414 |
acccttgtattgcaaaccaatttggctgtcattcacattcatcattc |
37532460 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 37593518 - 37593564
Alignment:
| Q |
40 |
acccatgtattgcaaaccaatttggctgtcattcacgttcatcattc |
86 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
37593518 |
acccttgtattgcaaaccaatttggctgtcattcacattcatcattc |
37593564 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 37695909 - 37695955
Alignment:
| Q |
40 |
acccatgtattgcaaaccaatttggctgtcattcacgttcatcattc |
86 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
37695909 |
acccttgtattgcaaaccaatttggctgtcattcacattcatcattc |
37695955 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 37435022 - 37435070
Alignment:
| Q |
38 |
ttacccatgtattgcaaaccaatttggctgtcattcacgttcatcattc |
86 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||||||| |||||||||| |
|
|
| T |
37435022 |
ttacccatgtattgcaaaccaatctggctatcattcacattcatcattc |
37435070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 37823218 - 37823264
Alignment:
| Q |
40 |
acccatgtattgcaaaccaatttggctgtcattcacgttcatcattc |
86 |
Q |
| |
|
||||||||||||||||||||||||| |||| |||| |||||||||| |
|
|
| T |
37823218 |
acccatgtattgcaaaccaatttggtcgtcactcacattcatcattc |
37823264 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 84; Significance: 5e-40; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 85 - 240
Target Start/End: Complemental strand, 16843726 - 16843571
Alignment:
| Q |
85 |
tcaacttaggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctag |
184 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||| |||||| | || ||||||| ||| ||||||||| || || |||||||||||||||||||| || |
|
|
| T |
16843726 |
tcaacttaggaaatggatgcttggtgctagaacaagtgattactccatgaagattattagatcgtaaaacgagtacctgtaactcttgtagagtttcaag |
16843627 |
T |
 |
| Q |
185 |
ccaattgggaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagat |
240 |
Q |
| |
|
|||| |||||||||||||||||||| |||||||||||||||| || |||||||||| |
|
|
| T |
16843626 |
ccaactgggaaatgtatcctctatgttgttgtcaccaaggtccaaaacttcaagat |
16843571 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 93 - 240
Target Start/End: Complemental strand, 16846386 - 16846239
Alignment:
| Q |
93 |
ggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctagccaattgg |
192 |
Q |
| |
|
||||||| ||||||| |||||||||| ||||||| ||| | ||| | |||||| | |||||| || || |||||||||||||||||||| |||||| ||| |
|
|
| T |
16846386 |
ggaaatggatgcttggtgctagaacatgtgattgaaccataaagtttatttgaccttaaactgagtacatgtaactcttgtagagtttcaagccaactgg |
16846287 |
T |
 |
| Q |
193 |
gaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaagat |
240 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| || |||||||||| |
|
|
| T |
16846286 |
gaaatgtatcctctatgttgttgtcaccaaggtccaaaacttcaagat |
16846239 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 93 - 238
Target Start/End: Complemental strand, 24218453 - 24218308
Alignment:
| Q |
93 |
ggaaatgaatgcttgatgctagaacaggtgattgcaccgtgaagatgatttgatcgtaaacttagcacttgtaactcttgtagagtttctagccaattgg |
192 |
Q |
| |
|
|||||||| || ||| |||||||||| |||||| |||| ||||||||||||||||||||||| || || ||||||||||| ||| ||||| |||||||| |
|
|
| T |
24218453 |
ggaaatgattgtttggtgctagaacaagtgattccaccatgaagatgatttgatcgtaaactgagtacctgtaactcttgcagaacttctaaccaattgg |
24218354 |
T |
 |
| Q |
193 |
gaaatgtatcctctatgctgttgtcaccaaggtctaatacttcaag |
238 |
Q |
| |
|
|||||||||| | |||| ||||||| |||||||| || |||||||| |
|
|
| T |
24218353 |
gaaatgtatcgtttatgatgttgtctccaaggtccaaaacttcaag |
24218308 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 16843841 - 16843796
Alignment:
| Q |
41 |
cccatgtattgcaaaccaatttggctgtcattcacgttcatcattc |
86 |
Q |
| |
|
|||||||||||||||||||| ||||| |||| ||| |||||||||| |
|
|
| T |
16843841 |
cccatgtattgcaaaccaatctggctatcatccacattcatcattc |
16843796 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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