View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4215_low_15 (Length: 358)
Name: NF4215_low_15
Description: NF4215
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4215_low_15 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 220; Significance: 1e-121; HSPs: 18)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 348
Target Start/End: Original strand, 30713976 - 30714323
Alignment:
| Q |
1 |
atgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaattatacttgtcatggaaagacaaacaaggaattccaaa |
100 |
Q |
| |
|
||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30713976 |
atgttggcagtttatttgaagctgaagcggctaatttgatgggtaaaaaagaccttcatgaattatacttgtcatggaaagacaaacaaggaattccaaa |
30714075 |
T |
|
| Q |
101 |
aacccctgttgttagtgttgagcaagtacttgaagttcttcaacctcactcaaatctcaagtgcttggatataaattgctatgaaggattatcgttacca |
200 |
Q |
| |
|
|||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||| |||||| ||||||| ||||||||||||||| |||||| |
|
|
| T |
30714076 |
gacccctgttgttagtgctgagcaagtactcgaagagcttcaacctcactcaaatctcaaatgcttgacaataaattactatgaaggattatcattacca |
30714175 |
T |
|
| Q |
201 |
agttggatgattattcttagtaatttaatttctcttcaactttggaattgcaacgaaattgtgcggcttccgtcacttagtaaactaccatctctgaaaa |
300 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||||| |||| ||||||| |||||||||||||||||| |||| |||||||||||||||| |||| |
|
|
| T |
30714176 |
agttggataattattcttagtaatttagtttctcttgtacttctccattgcaagaaaattgtgcggcttccgttacttggtaaactaccatctctaaaaa |
30714275 |
T |
|
| Q |
301 |
aactggaattatattttatgaataatctgaaatacttggatgatgatg |
348 |
Q |
| |
|
||||| ||||||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
30714276 |
aactgagattatatggtatcaataatctgaaatacttggatgatgatg |
30714323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 348
Target Start/End: Complemental strand, 30059918 - 30059571
Alignment:
| Q |
1 |
atgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaattatacttgtcatggaaagacaaacaaggaattccaaa |
100 |
Q |
| |
|
||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30059918 |
atgttggcaggttatttgaagctgaagcggctaatttgatgggtaaaaaagaccttcatgaattatacttgtcatggaaagacaaacaaggaattccaaa |
30059819 |
T |
|
| Q |
101 |
aacccctgttgttagtgttgagcaagtacttgaagttcttcaacctcactcaaatctcaagtgcttggatataaattgctatgaaggattatcgttacca |
200 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||| || |||||| |||||||| || ||| |
|
|
| T |
30059818 |
gaaccctgttgttagtgttgagcaagtacttgaagttcttcaacctcactcaaatctcaactgcttgaaaataagtttctatgagggattatccttgcca |
30059719 |
T |
|
| Q |
201 |
agttggatgattattcttagtaatttaatttctcttcaactttggaattgcaacgaaattgtgcggcttccgtcacttagtaaactaccatctctgaaaa |
300 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||||| ||||| | ||| || || |||||||||||| || |||| ||| |||||||||| | |||| |
|
|
| T |
30059718 |
agttggataattattcttagtaatttagtttctcttaaacttaagcgttgtaagaaagttgtgcggcttcagttacttggtatactaccatctttaaaaa |
30059619 |
T |
|
| Q |
301 |
aactggaattatattttatgaataatctgaaatacttggatgatgatg |
348 |
Q |
| |
|
| |||||||||| || |||| ||||||||||||||||||||||||||| |
|
|
| T |
30059618 |
acctggaattatcttatatggataatctgaaatacttggatgatgatg |
30059571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 348
Target Start/End: Complemental strand, 29871735 - 29871400
Alignment:
| Q |
1 |
atgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaattatacttgtcatggaaagacaaacaaggaattccaaa |
100 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||| ||||| |
|
|
| T |
29871735 |
atgttggcagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaattatgcttgtcatggatatcgcaaca-ggaat------ |
29871643 |
T |
|
| Q |
101 |
aacccctgttgttagtgttgagcaagtacttgaagttcttcaacctcactcaaatctcaagtgcttggatataaattgctatgaaggattatcgttacca |
200 |
Q |
| |
|
|| | |||||| |||||||||||| |||| ||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
29871642 |
-----ctataattagtgctgagcaagtactcgaagagcttcaacctcactcaaatctcaaatgcttgacaataaattactatgaaggattatcgttacca |
29871548 |
T |
|
| Q |
201 |
agttggatgattattcttagtaatttaatttctcttcaactttggaattgcaacgaaattgtgcggcttccgtcacttagtaaactaccatctctgaaaa |
300 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| ||||| | |||||||| | |||||||||||||||| |||| |||||||||||||||| |||| |
|
|
| T |
29871547 |
agttggataattattcttagtaatttaatttctcttaaacttgaggattgcaacaagattgtgcggcttccgttacttggtaaactaccatctctaaaaa |
29871448 |
T |
|
| Q |
301 |
aactggaattatattttatgaataatctgaaatacttggatgatgatg |
348 |
Q |
| |
|
|||||||||||| || |||| ||||||||||||||||||||||||||| |
|
|
| T |
29871447 |
aactggaattatcttatatggataatctgaaatacttggatgatgatg |
29871400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 348
Target Start/End: Complemental strand, 30749192 - 30748857
Alignment:
| Q |
1 |
atgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaattatacttgtcatggaaagacaaacaaggaattccaaa |
100 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| | |||| | ||||| |
|
|
| T |
30749192 |
atgttggcagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatgaattatgcttgtcatgggtatacaagga-ggaat------ |
30749100 |
T |
|
| Q |
101 |
aacccctgttgttagtgttgagcaagtacttgaagttcttcaacctcactcaaatctcaagtgcttggatataaattgctatgaaggattatcgttacca |
200 |
Q |
| |
|
|| ||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
30749099 |
-----ctacggttagtgctgagcaagtacttgaagtgcttcaacctcactcaaatctcaaatgcttgacaataaattactatgaaggattatcgttacca |
30749005 |
T |
|
| Q |
201 |
agttggatgattattcttagtaatttaatttctcttcaactttggaattgcaacgaaattgtgcggcttccgtcacttagtaaactaccatctctgaaaa |
300 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| ||||| || ||||||| |||||||||||||||||| |||| |||||||||||||||| |||| |
|
|
| T |
30749004 |
agttggataattattcttagtaatttaatttctcttgaacttgagatttgcaacaaaattgtgcggcttccgttacttggtaaactaccatctctaaaaa |
30748905 |
T |
|
| Q |
301 |
aactggaattatattttatgaataatctgaaatacttggatgatgatg |
348 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
30748904 |
aactaagattatatggtatgaataatctgaaatacttggatgatgatg |
30748857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 1 - 348
Target Start/End: Original strand, 30242926 - 30243261
Alignment:
| Q |
1 |
atgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaattatacttgtcatggaaagacaaacaaggaattccaaa |
100 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| | | |||| | | || | | |
|
|
| T |
30242926 |
atgttggcagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatgaattatgcttgtcatggatatcccaacatgaa--tctata |
30243023 |
T |
|
| Q |
101 |
aacccctgttgttagtgttgagcaagtacttgaagttcttcaacctcactcaaatctcaagtgcttggatataaattgctatgaaggattatcgttacca |
200 |
Q |
| |
|
| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |||| || |||||| |||||||| |||||| |
|
|
| T |
30243024 |
a----------ttagtgctgagcaagtacttgaagtgcttcaacctcactcaaatctcaagtgcttgaaaataagtttctatgagggattatccttacca |
30243113 |
T |
|
| Q |
201 |
agttggatgattattcttagtaatttaatttctcttcaactttggaattgcaacgaaattgtgcggcttccgtcacttagtaaactaccatctctgaaaa |
300 |
Q |
| |
|
|||||||| ||| ||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||| |||| |||||||||||| ||| |||| |
|
|
| T |
30243114 |
agttggataattcttcttagtaatttaatttctcttgaacttcggaattgcaacaaaattgtgcggcttccgttacttggtaaactaccatatctaaaaa |
30243213 |
T |
|
| Q |
301 |
aactggaattatattttatgaataatctgaaatacttggatgatgatg |
348 |
Q |
| |
|
|||||||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
30243214 |
aactggaattattcgaaatggataatctgaaatacttggatgatgatg |
30243261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 1 - 348
Target Start/End: Complemental strand, 30482953 - 30482618
Alignment:
| Q |
1 |
atgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaattatacttgtcatggaaagacaaacaaggaattccaaa |
100 |
Q |
| |
|
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| | | |||| ||||| |
|
|
| T |
30482953 |
atgttggcaggttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatgaattatgcttgtcatggatatcccaaca-ggaat------ |
30482861 |
T |
|
| Q |
101 |
aacccctgttgttagtgttgagcaagtacttgaagttcttcaacctcactcaaatctcaagtgcttggatataaattgctatgaaggattatcgttacca |
200 |
Q |
| |
|
|| | |||||| ||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||| | ||||||| |||||||||||| |
|
|
| T |
30482860 |
-----ctataattagtgctgagcaagtacttgaagagcttcaacctcactcaaatctcaaatgcttgacaataaattacaatgaagggttatcgttacca |
30482766 |
T |
|
| Q |
201 |
agttggatgattattcttagtaatttaatttctcttcaactttggaattgcaacgaaattgtgcggcttccgtcacttagtaaactaccatctctgaaaa |
300 |
Q |
| |
|
|||||||| | ||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||| |||| |||||||||||||||| |||| |
|
|
| T |
30482765 |
agttggataagccttcttagtaatttaatttctcttgaacttcggaattgcaacaaaattgtgcggcttccgttacttggtaaactaccatctctaaaaa |
30482666 |
T |
|
| Q |
301 |
aactggaattatattttatgaataatctgaaatacttggatgatgatg |
348 |
Q |
| |
|
|||||||||||| || |||| ||||||||||||||||||||||||||| |
|
|
| T |
30482665 |
aactggaattatcttatatggataatctgaaatacttggatgatgatg |
30482618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 348
Target Start/End: Complemental strand, 30435371 - 30435036
Alignment:
| Q |
1 |
atgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaattatacttgtcatggaaagacaaacaaggaattccaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||| |||| | |||| ||||| |
|
|
| T |
30435371 |
atgttggtagtttatctgaagctgaagcggctaatttgaagggtaaaaaagaccttcatgaattatgcttgtcgtggatatcgcaaca-ggaat------ |
30435279 |
T |
|
| Q |
101 |
aacccctgttgttagtgttgagcaagtacttgaagttcttcaacctcactcaaatctcaagtgcttggatataaattgctatgaaggattatcgttacca |
200 |
Q |
| |
|
|| | |||| ||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
30435278 |
-----ctataattagatctgagcaattactcgaagagcttcaacctcactcaaatctcaagtgcttggatataaattgctatgacggattatcgttacca |
30435184 |
T |
|
| Q |
201 |
agttggatgattattcttagtaatttaatttctcttcaactttggaattgcaacgaaattgtgcggcttccgtcacttagtaaactaccatctctgaaaa |
300 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| ||||| || |||||||| |||||||||||||||||| | || |||||||||||||||| |||| |
|
|
| T |
30435183 |
agttggataattattcttagtaatttaatttctcttaaacttggggattgcaacaaaattgtgcggcttccgttatttggtaaactaccatctctaaaaa |
30435084 |
T |
|
| Q |
301 |
aactggaattatattttatgaataatctgaaatacttggatgatgatg |
348 |
Q |
| |
|
|||| | ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
30435083 |
aacttagagtatatggtatgaataatctgaaatacttggatgatgatg |
30435036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 4 - 348
Target Start/End: Complemental strand, 30399623 - 30399279
Alignment:
| Q |
4 |
ttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaattatacttgtcatggaaagacaaacaaggaattccaaaaac |
103 |
Q |
| |
|
|||| ||||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||| |||||||||| || ||| | ||| || | || | |
|
|
| T |
30399623 |
ttggcagtttatctcaagctcaagcggctgatttgatgggtaaaaaagaccttcatgaattatgcttgtcatgggaaagcaactatggatttaccaatcc |
30399524 |
T |
|
| Q |
104 |
ccctgttgttagtgttgagcaagtacttgaagttcttcaacctcactcaaatctcaagtgcttggatataaattgctatgaaggattatcgttaccaagt |
203 |
Q |
| |
|
||| | |||||| | |||||||||| ||||| |||||||||||||||||||||||||||||| | ||||||| |||||| |||||||| ||||||||| |
|
|
| T |
30399523 |
cccaactattagtgctcagcaagtactcgaagtgcttcaacctcactcaaatctcaagtgcttgaaaataaattactatgacggattatcattaccaagt |
30399424 |
T |
|
| Q |
204 |
tggatgattattcttagtaatttaatttctcttcaactttggaattgcaacgaaattgtgcggcttccgtcacttagtaaactaccatctctgaaaaaac |
303 |
Q |
| |
|
||||| |||||||||||||||||| |||||||| ||||| |||||||||| || ||||||| |||| || | || |||||||||| ||||| ||||||| |
|
|
| T |
30399423 |
tggataattattcttagtaatttagtttctcttgaacttgggaattgcaagaaagttgtgcgacttcagttaattggtaaactaccgtctctaaaaaaac |
30399324 |
T |
|
| Q |
304 |
tggaattatattttatgaataatctgaaatacttggatgatgatg |
348 |
Q |
| |
|
||||||||| | |||| ||||||||||||||||||||||||||| |
|
|
| T |
30399323 |
tggaattatctgatatggataatctgaaatacttggatgatgatg |
30399279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 1 - 348
Target Start/End: Original strand, 30677722 - 30678057
Alignment:
| Q |
1 |
atgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaattatacttgtcatggaaagacaaacaaggaattccaaa |
100 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||| |||||||||| | |||| | ||||| |
|
|
| T |
30677722 |
atgttgctagtttatctgaagctgaagcggctaaattgatggataaaaaagaccttcatgaattatgcttgtcatggggatacaagga-ggaat------ |
30677814 |
T |
|
| Q |
101 |
aacccctgttgttagtgttgagcaagtacttgaagttcttcaacctcactcaaatctcaagtgcttggatataaattgctatgaaggattatcgttacca |
200 |
Q |
| |
|
|| ||||||| |||||||||||||||||| ||| ||||||||||||||||||| |||||| ||||||| ||||||| |||||||||||||| |
|
|
| T |
30677815 |
-----ctacggttagtgctgagcaagtacttgaagtgcttaaacctcactcaaatctcaaatgcttgacaataaattactatgaaagattatcgttacca |
30677909 |
T |
|
| Q |
201 |
agttggatgattattcttagtaatttaatttctcttcaactttggaattgcaacgaaattgtgcggcttccgtcacttagtaaactaccatctctgaaaa |
300 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| ||||| | | |||||| |||||||||||||||||| || | |||||||||||||||| |||| |
|
|
| T |
30677910 |
agttggataattattcttagtaatttaatttctcttgaacttgaggaatgcaacaaaattgtgcggcttccgttacgtggtaaactaccatctctaaaaa |
30678009 |
T |
|
| Q |
301 |
aactggaattatattttatgaataatctgaaatacttggatgatgatg |
348 |
Q |
| |
|
|||| ||||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
30678010 |
gactgagattatctcgtatgaataatctgaaatacttggatgatgatg |
30678057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 9 - 348
Target Start/End: Complemental strand, 29852852 - 29852513
Alignment:
| Q |
9 |
agtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaattatacttgtcatggaaagacaaacaaggaattccaaaaacccctg |
108 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||| ||||||||| || ||| | ||| || | | |||| |
|
|
| T |
29852852 |
agtttatctgaagctgaagcggctaatttgatgggtaaaacagacattcatgaattatgtttgtcatgggaaagcaatgatggatttactgagcccccaa |
29852753 |
T |
|
| Q |
109 |
ttgttagtgttgagcaagtacttgaagttcttcaacctcactcaaatctcaagtgcttggatataaattgctatgaaggattatcgttaccaagttggat |
208 |
Q |
| |
|
| || || |||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
29852752 |
ctattcatgatgagcaagtactcgaagagcttcaacctcactcaaatctcaagtgcttggacataaattactatgaaggattatcgttaccaagttggat |
29852653 |
T |
|
| Q |
209 |
gattattcttagtaatttaatttctcttcaactttggaattgcaacgaaattgtgcggcttccgtcacttagtaaactaccatctctgaaaaaactggaa |
308 |
Q |
| |
|
| ||||||||| ||||||||||||| ||||| ||||||||||| |||||||||||||||||| |||| |||||||||||| ||| ||||| ||| | |
|
|
| T |
29852652 |
aagccttcttagtagtttaatttctcttgaacttcggaattgcaacaaaattgtgcggcttccgttactttgtaaactaccatatctaaaaaagttggta |
29852553 |
T |
|
| Q |
309 |
ttatattttatgaataatctgaaatacttggatgatgatg |
348 |
Q |
| |
|
|||| ||| |||||||||||||||| |||||||||| |
|
|
| T |
29852552 |
ttattcaaaatggataatctgaaatacttagatgatgatg |
29852513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 348
Target Start/End: Original strand, 30339079 - 30339414
Alignment:
| Q |
1 |
atgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaattatacttgtcatggaaagacaaacaaggaattccaaa |
100 |
Q |
| |
|
||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| | |||| ||||| |
|
|
| T |
30339079 |
atgttggcaggttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaattatgcttgtcgtggatatcgcaaca-ggaat------ |
30339171 |
T |
|
| Q |
101 |
aacccctgttgttagtgttgagcaagtacttgaagttcttcaacctcactcaaatctcaagtgcttggatataaattgctatgaaggattatcgttacca |
200 |
Q |
| |
|
|| | |||||| ||||||||| || |||| ||||||||||||||||||||||| | |||| |||||| |||||||||||||||||||||| |
|
|
| T |
30339172 |
-----ctataattagtgctgagcaagtgctcgaagagcttcaacctcactcaaatctcaattccttgacagtaaatttctatgaaggattatcgttacca |
30339266 |
T |
|
| Q |
201 |
agttggatgattattcttagtaatttaatttctcttcaactttggaattgcaacgaaattgtgcggcttccgtcacttagtaaactaccatctctgaaaa |
300 |
Q |
| |
|
|||||||| | ||||||||||||||||||||||| | ||||||||||||||| ||||||||| ||||| || |||| |||||||||||||||| |||| |
|
|
| T |
30339267 |
agttggataagccttcttagtaatttaatttctcttaatctttggaattgcaacaaaattgtgctgcttcagttacttggtaaactaccatctctaaaaa |
30339366 |
T |
|
| Q |
301 |
aactggaattatattttatgaataatctgaaatacttggatgatgatg |
348 |
Q |
| |
|
| || | ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
30339367 |
atcttagagtatatcgtatgaataatctgaaatacttggatgatgatg |
30339414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 348
Target Start/End: Original strand, 17418711 - 17419058
Alignment:
| Q |
1 |
atgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaattatacttgtcatggaaagacaaacaaggaattc-caa |
99 |
Q |
| |
|
||||||||| ||||||||||||| ||| ||||| ||||| |||||||||||||| || |||||| |||||| |||||| ||| | | ||||| ||| |
|
|
| T |
17418711 |
atgttggtaatttatctgaagctcaagaagctaagttgataggtaaaaaagacctccaagaattatgcttgtcgtggaaaagcaa-cgatgaattgacaa |
17418809 |
T |
|
| Q |
100 |
aaacccctgttgttagtgttgagcaagtacttgaagttcttcaacctcactcaaatctcaagtgcttggatataaattgctatgaaggattatcgttacc |
199 |
Q |
| |
|
| |||||| ||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||| | |||| || |||||| ||| ||| |||||| |
|
|
| T |
17418810 |
agacccctattgttagtgctgagcaactacttgaagtgcttcaacctcactcaaatctcaagtgcttgaaaataacttactatgatggaatattgttacc |
17418909 |
T |
|
| Q |
200 |
aagttggatgattattcttagtaatttaatttctcttcaactttggaattgcaacgaaat-tgtgcggcttccgtcacttagtaaactaccatctctgaa |
298 |
Q |
| |
|
||||||||| | |||||||||||||||| || | || |||| | ||||| | ||| | |||||||||| ||||| || ||||||||| |||||| || |
|
|
| T |
17418910 |
aagttggataagtattcttagtaatttagttaatgttgcacttagtaattgtga-gaactgtgtgcggctttcgtcatttggtaaactacaatctctaaa |
17419008 |
T |
|
| Q |
299 |
aaaactggaattatattttatgaataatctgaaatacttggatgatgatg |
348 |
Q |
| |
|
| ||||||||||| || ||||| ||||||||||||||||||||||||| |
|
|
| T |
17419009 |
attactggaattatcttacatgaaaaatctgaaatacttggatgatgatg |
17419058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 217 - 348
Target Start/End: Complemental strand, 4381003 - 4380872
Alignment:
| Q |
217 |
ttagtaatttaatttctcttcaactttggaattgcaacgaaattgtgcggcttccgtcacttagtaaactaccatctctgaaaaaactggaattatattt |
316 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||||| || |||||||||||||||||||| |||||||| ||||||| |||||| ||||||||| | |
|
|
| T |
4381003 |
ttagtaatttaatttctcttaaactttgtgtttgcaacaaagttgtgcggcttccgtcacttggtaaactaacatctctaaaaaaattggaattatttcg |
4380904 |
T |
|
| Q |
317 |
tatgaataatctgaaatacttggatgatgatg |
348 |
Q |
| |
|
|| | ||||||||||||||||||||||||||| |
|
|
| T |
4380903 |
tacggataatctgaaatacttggatgatgatg |
4380872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 348
Target Start/End: Complemental strand, 30206074 - 30205727
Alignment:
| Q |
1 |
atgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaattatacttgtcatggaaagacaaacaaggaattccaaa |
100 |
Q |
| |
|
||||| ||||||||||||||||| |||| || ||||||||||||||||||||||| || |||||| || || |||| ||| | ||| || | || |
|
|
| T |
30206074 |
atgtttgtagtttatctgaagctcaagcagccaatttgatgggtaaaaaagacctccaggaattatgtttttcgtggaccagcaatgacggatttacgaa |
30205975 |
T |
|
| Q |
101 |
aacccctgttgttagtgttgagcaagtacttgaagttcttcaacctcactcaaatctcaagtgcttggatataaattg---ctatgaaggattatcgtta |
197 |
Q |
| |
|
|||||| | ||||| |||||||| || ||||||| |||||||||||||||||||||||| | ||| |||| ||| |||| | |||||| ||| |
|
|
| T |
30205974 |
gacccctactattagttttgagcaactatttgaagtgcttcaacctcactcaaatctcaagaggttg---ataatttgtcactataacagattattctta |
30205878 |
T |
|
| Q |
198 |
ccaagttggatgattattcttagtaatttaatttctcttcaactttggaattgcaacgaaat-tgtgcggcttccgtcacttagtaaactaccatctctg |
296 |
Q |
| |
|
||||||||||| | |||||| ||||||||| || ||||| |||||||||||| | ||||| |||||||||||||||| || ||||||||| |||| || |
|
|
| T |
30205877 |
ccaagttggataagtattctcagtaatttagttgctcttgtactttggaattgtga-gaaatgtgtgcggcttccgtcatttggtaaactacaatctttg |
30205779 |
T |
|
| Q |
297 |
aaaaaactggaattatattttatgaataatctgaaatacttggatgatgatg |
348 |
Q |
| |
|
|||||||| | || || ||||||| || ||||||||||||||||||||| |
|
|
| T |
30205778 |
aaaaaactcgctttgcataatatgaatgatttgaaatacttggatgatgatg |
30205727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 29709731 - 29709817
Alignment:
| Q |
260 |
tgtgcggcttccgtcacttagtaaactaccatctctgaaaaaactggaattatattttatgaataatctgaaatacttggatgatga |
346 |
Q |
| |
|
|||||| ||||| ||| || ||||||||| |||||| ||||||||||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
29709731 |
tgtgcgccttccttcatttggtaaactactatctctaaaaaaactggaattatacagtatgcgtaatctgaaatacttggatgatga |
29709817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 30474815 - 30474773
Alignment:
| Q |
119 |
tgagcaagtacttgaagttcttcaacctcactcaaatctcaag |
161 |
Q |
| |
|
|||||||||||||||| | |||||||||||||||||||||||| |
|
|
| T |
30474815 |
tgagcaagtacttgaaatgcttcaacctcactcaaatctcaag |
30474773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 30522299 - 30522362
Alignment:
| Q |
127 |
tacttgaagttcttcaacctcactcaaatctcaagtgcttggatataaattgctatgaaggatt |
190 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| |||| | ||| || ||||||| ||||| |
|
|
| T |
30522299 |
tacttgaagtgcttcaacctcactcaaatctcaagatcttgaaaatacatggctatgacggatt |
30522362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 30562639 - 30562702
Alignment:
| Q |
127 |
tacttgaagttcttcaacctcactcaaatctcaagtgcttggatataaattgctatgaaggatt |
190 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| |||| | ||| || ||||||| ||||| |
|
|
| T |
30562639 |
tacttgaagtgcttcaacctcactcaaatctcaagatcttgaaaatacatggctatgacggatt |
30562702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 348
Target Start/End: Original strand, 20297145 - 20297492
Alignment:
| Q |
1 |
atgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaattatacttgtcatggaaagacaaacaaggaattccaaa |
100 |
Q |
| |
|
||||||| ||| ||||||||||| ||| || ||||||||||||||||||||||||||| |||||| |||||| ||| || ||| | | || | || |
|
|
| T |
20297145 |
atgttggcagtatatctgaagctcaagaagccaatttgatgggtaaaaaagaccttcatgaattatgcttgtcttgggaaagcaatgataaatttaccaa |
20297244 |
T |
|
| Q |
101 |
aacccctgttgttagtgttgagcaagtacttgaagttcttcaacctcactcaaatctcaagtgcttggatataaattgctatgaaggattatcgttacca |
200 |
Q |
| |
|
| || ||| |||| |||| ||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||||| ||||| | ||||||| |
|
|
| T |
20297245 |
gccaccaactgtaagtgctgagaaagtactcgaagtgcttcaacctcagtcaaatctcaagtgcttggaaataaattgctatgatggattgtggttacca |
20297344 |
T |
|
| Q |
201 |
agttggatgattattcttagtaatttaatttctcttcaactttggaattgcaacgaaattgtgcggcttccgtcacttagtaaactaccatctctgaaaa |
300 |
Q |
| |
|
|||||||| |||||||||||||||||| ||||| || ||||| |||||||||||||||||||| |||||||| | || |||||||||||||||| |||| |
|
|
| T |
20297345 |
agttggataattattcttagtaatttagtttcttttgaacttgagaattgcaacgaaattgtgcagcttccgttaattggtaaactaccatctctaaaaa |
20297444 |
T |
|
| Q |
301 |
aactggaattatattttatgaataatctgaaatacttggatgatgatg |
348 |
Q |
| |
|
||||| | ||| | |||| ||||||||||||||||||||||||||| |
|
|
| T |
20297445 |
aactgacaatatctggtatgtataatctgaaatacttggatgatgatg |
20297492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 124; Significance: 1e-63; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 348
Target Start/End: Complemental strand, 26706893 - 26706546
Alignment:
| Q |
1 |
atgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaattatacttgtcatggaaagacaaacaaggaattccaaa |
100 |
Q |
| |
|
||||||| ||||||||||||||| ||| || ||||||||||| |||||| |||| | |||||| |||||||||| || |||| | ||| || | || |
|
|
| T |
26706893 |
atgttggcagtttatctgaagctcaagaagccaatttgatggggaaaaaaaacctcgaaaaattatgcttgtcatgggaaaacaatgatggatttaccaa |
26706794 |
T |
|
| Q |
101 |
aacccctgttgttagtgttgagcaagtacttgaagttcttcaacctcactcaaatctcaagtgcttggatataaattgctatgaaggattatcgttacca |
200 |
Q |
| |
|
| || | ||||||||||||| |||| |||| |||||||||||||||||||||||||||||||| ||||| | ||| || |||||||| |||||| |
|
|
| T |
26706793 |
gccaccaactattagtgttgagcagctactcaaagtgcttcaacctcactcaaatctcaagtgcttggaaataaagtactacgacggattatcattacca |
26706694 |
T |
|
| Q |
201 |
agttggatgattattcttagtaatttaatttctcttcaactttggaattgcaacgaaattgtgcggcttccgtcacttagtaaactaccatctctgaaaa |
300 |
Q |
| |
|
|||||| | | |||||||||||||||| |||||||| ||||| || ||||||| || ||||||||||||||| |||| |||||||||||||||| ||| |
|
|
| T |
26706693 |
agttgggtaagtattcttagtaatttagtttctcttgaacttggggattgcaagaaatttgtgcggcttccgttacttggtaaactaccatctctagaaa |
26706594 |
T |
|
| Q |
301 |
aactggaattatattttatgaataatctgaaatacttggatgatgatg |
348 |
Q |
| |
|
|||||||||||| || |||| |||||||||||||||||||||||||| |
|
|
| T |
26706593 |
aactggaattatcttctatggttaatctgaaatacttggatgatgatg |
26706546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7098973 - 7098895
Alignment:
| Q |
1 |
atgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaattatacttgtcatggaa |
79 |
Q |
| |
|
||||||||||||||||||||||| ||| || ||||| ||||||||||||||||| || |||||| |||||||||||| |
|
|
| T |
7098973 |
atgttggtagtttatctgaagctaaagaagccaatttaatgggtaaaaaagacctcgatgaattatgcttgtcatggaa |
7098895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 7582273 - 7582349
Alignment:
| Q |
1 |
atgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaattatacttgtcatgg |
77 |
Q |
| |
|
|||| |||||||||||||||||| ||| || || |||||||||||||||||||| || |||||| |||||||||| |
|
|
| T |
7582273 |
atgtcggtagtttatctgaagctcaagaagccaacttgatgggtaaaaaagacctcgatgaattatgcttgtcatgg |
7582349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 7582395 - 7582439
Alignment:
| Q |
123 |
caagtacttgaagttcttcaacctcactcaaatctcaagtgcttg |
167 |
Q |
| |
|
|||||||||||||| |||||||||||| ||||||||||| ||||| |
|
|
| T |
7582395 |
caagtacttgaagtgcttcaacctcacacaaatctcaagagcttg |
7582439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 105 - 236
Target Start/End: Complemental strand, 7098869 - 7098738
Alignment:
| Q |
105 |
cctgttgttagtgttgagcaagtacttgaagttcttcaacctcactcaaatctcaagtgcttggatataaattgctatgaaggattatcgttaccaagtt |
204 |
Q |
| |
|
|||||| | |||| ||| |||||| ||||||| ||||||||||| ||||||||||| ||||| | ||| ||| || ||||||||| || ||||||| |
|
|
| T |
7098869 |
cctgttatcagtgatgatcaagtaattgaagtgcttcaacctcatacaaatctcaagagcttgaaaatacattcttaccaaggattatgctttccaagtt |
7098770 |
T |
|
| Q |
205 |
ggatgattattcttagtaatttaatttctctt |
236 |
Q |
| |
|
|||| | | ||||||||||||| || ||||| |
|
|
| T |
7098769 |
ggatcagaactcttagtaatttagttactctt |
7098738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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