View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4217_high_15 (Length: 261)
Name: NF4217_high_15
Description: NF4217
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4217_high_15 |
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Alignment Details
Target: chr5 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 2621366 - 2621123
Alignment:
| Q |
14 |
attaaacagattacaagggatattcaaactacatcaagatacacaactcctataaatcatgccgagtaaccttggaggtttaggatcaaaaagtctaaac |
113 |
Q |
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| T |
2621366 |
attaaacagattacaagggatattcaaactacatcaagatacacaactcctataaatcatgccgagtaaccttggaggtttaggatcaaaaagtctaaac |
2621267 |
T |
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| Q |
114 |
atattggtcgttcacctcatgttccttataaactcttttagtctcactattttatccgatgtgaaacttctattttcaacattctccctaagtccaactg |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2621266 |
atattggtcgttcacctcatgttccttataaactcttttagtctcactattttatccgatgtgaaacttctattttcaacattctccctaagtccaactg |
2621167 |
T |
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| Q |
214 |
ggttagtctcttcagcggtccatttctaaattgatgatgtccat |
257 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
2621166 |
ggttagtctcttcagcggtccatttctaaattgatgatgaccat |
2621123 |
T |
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