View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4218_high_24 (Length: 209)
Name: NF4218_high_24
Description: NF4218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4218_high_24 |
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Alignment Details
Target: chr1 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 32041060 - 32040872
Alignment:
| Q |
1 |
acaatagactagaagctaaaatgctaaatcattaactttggacaactggcattgctaggtaaaaaaactggttacagttctacagcgttagaacaaaact |
100 |
Q |
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| T |
32041060 |
acaatagactagaagctaaaatgctaaaacattaactttggacaactggcattgctaggtaaaaaaactggttacagttctacagcgttagaacaaaact |
32040961 |
T |
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| Q |
101 |
actnnnnnnnnnnncagagaaattaaacgaagacaaaaactagcgtccattagcgagagatgtaacaactgaatccttgcaaggactgaaag |
192 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32040960 |
act---aaaaaaaacagagaaattaaacgaagacaaaaactagcgtccattagcgagagatgtaacaactgaatccttgcaaggactgaaag |
32040872 |
T |
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