View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4218_high_25 (Length: 203)

Name: NF4218_high_25
Description: NF4218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4218_high_25
NF4218_high_25
[»] scaffold0022 (1 HSPs)
scaffold0022 (19-189)||(90851-91021)
[»] chr1 (71 HSPs)
chr1 (100-197)||(46348345-46348442)
chr1 (100-202)||(40181866-40181968)
chr1 (100-197)||(22515849-22515946)
chr1 (116-200)||(18190086-18190170)
chr1 (117-188)||(18337338-18337409)
chr1 (116-197)||(5898244-5898325)
chr1 (146-191)||(16927193-16927238)
chr1 (100-189)||(40258895-40258984)
chr1 (98-190)||(51410031-51410124)
chr1 (100-199)||(1486666-1486770)
chr1 (117-197)||(21530689-21530769)
chr1 (125-189)||(39130754-39130818)
chr1 (98-197)||(2896081-2896180)
chr1 (144-198)||(48148043-48148098)
chr1 (151-197)||(398778-398824)
chr1 (144-202)||(38503315-38503373)
chr1 (131-197)||(39953139-39953205)
chr1 (144-197)||(34257916-34257969)
chr1 (100-197)||(38078623-38078720)
chr1 (150-202)||(26837754-26837806)
chr1 (117-197)||(36878461-36878541)
chr1 (118-190)||(37598839-37598910)
chr1 (153-196)||(5927355-5927398)
chr1 (133-196)||(14332637-14332700)
chr1 (151-197)||(9629913-9629959)
chr1 (128-190)||(22881606-22881668)
chr1 (144-202)||(34371709-34371766)
chr1 (102-195)||(8842678-8842771)
chr1 (145-202)||(17754306-17754363)
chr1 (100-197)||(43492456-43492553)
chr1 (133-194)||(52903252-52903313)
chr1 (153-197)||(113299-113343)
chr1 (100-191)||(7353454-7353546)
chr1 (153-197)||(11605950-11605994)
chr1 (145-189)||(16164322-16164366)
chr1 (117-189)||(22907318-22907390)
chr1 (153-197)||(41877485-41877529)
chr1 (144-203)||(1864886-1864945)
chr1 (133-196)||(9709821-9709884)
chr1 (98-197)||(13997883-13997982)
chr1 (154-189)||(15323171-15323206)
chr1 (150-197)||(25098567-25098614)
chr1 (101-196)||(28674801-28674896)
chr1 (144-202)||(29229456-29229515)
chr1 (151-202)||(34298431-34298482)
chr1 (100-199)||(42359411-42359510)
chr1 (153-196)||(48450602-48450645)
chr1 (150-196)||(6427351-6427397)
chr1 (145-199)||(7918218-7918272)
chr1 (153-199)||(24577201-24577247)
chr1 (153-199)||(28273103-28273149)
chr1 (145-191)||(34712390-34712436)
chr1 (136-190)||(35999320-35999374)
chr1 (142-191)||(8010291-8010340)
chr1 (144-197)||(9828044-9828097)
chr1 (144-197)||(17831537-17831590)
chr1 (144-197)||(20157356-20157409)
chr1 (150-199)||(22781440-22781489)
chr1 (145-194)||(23804431-23804480)
chr1 (153-202)||(31672910-31672959)
chr1 (153-190)||(32461478-32461515)
chr1 (144-193)||(44482234-44482283)
chr1 (101-189)||(1815265-1815353)
chr1 (150-190)||(12707885-12707925)
chr1 (150-190)||(12713339-12713379)
chr1 (150-190)||(12717430-12717470)
chr1 (153-197)||(14359537-14359580)
chr1 (150-202)||(17425105-17425157)
chr1 (153-197)||(18556471-18556515)
chr1 (153-197)||(23738678-23738722)
chr1 (145-197)||(25361886-25361938)
[»] scaffold0053 (1 HSPs)
scaffold0053 (101-197)||(8798-8894)
[»] chr6 (69 HSPs)
chr6 (98-197)||(33001249-33001348)
chr6 (116-196)||(7265571-7265651)
chr6 (100-190)||(12627539-12627629)
chr6 (100-197)||(17841551-17841648)
chr6 (101-197)||(7977793-7977889)
chr6 (102-202)||(28715290-28715390)
chr6 (102-197)||(9658879-9658974)
chr6 (151-197)||(7938116-7938162)
chr6 (143-197)||(10842532-10842586)
chr6 (116-190)||(34595141-34595215)
chr6 (128-197)||(19040352-19040421)
chr6 (146-202)||(5462681-5462737)
chr6 (133-197)||(5732505-5732569)
chr6 (144-192)||(24832593-24832641)
chr6 (144-188)||(26314640-26314684)
chr6 (100-199)||(6898243-6898342)
chr6 (144-191)||(7086801-7086848)
chr6 (150-197)||(7996390-7996437)
chr6 (150-197)||(8022364-8022411)
chr6 (150-197)||(10888986-10889033)
chr6 (150-197)||(24138426-24138473)
chr6 (116-191)||(28152105-28152179)
chr6 (115-197)||(1191677-1191759)
chr6 (150-196)||(7151413-7151459)
chr6 (100-197)||(24645480-24645578)
chr6 (154-196)||(34447374-34447416)
chr6 (97-190)||(853818-853911)
chr6 (116-197)||(7377979-7378060)
chr6 (144-197)||(9025500-9025553)
chr6 (100-197)||(13360335-13360431)
chr6 (151-196)||(13689505-13689550)
chr6 (133-194)||(24614413-24614474)
chr6 (144-197)||(25096423-25096476)
chr6 (133-197)||(13851736-13851800)
chr6 (153-197)||(16766697-16766741)
chr6 (133-197)||(21924930-21924994)
chr6 (144-196)||(30866150-30866202)
chr6 (151-199)||(32511679-32511727)
chr6 (98-197)||(32978859-32978959)
chr6 (100-202)||(4877937-4878039)
chr6 (152-191)||(8805586-8805625)
chr6 (138-189)||(21142126-21142177)
chr6 (142-197)||(26562689-26562744)
chr6 (145-196)||(33468389-33468440)
chr6 (150-196)||(1532241-1532287)
chr6 (153-191)||(2224232-2224270)
chr6 (151-197)||(3398619-3398664)
chr6 (144-190)||(9195760-9195806)
chr6 (115-197)||(13364682-13364764)
chr6 (151-197)||(17341677-17341723)
chr6 (144-198)||(25038077-25038131)
chr6 (144-190)||(26178687-26178733)
chr6 (102-196)||(32298571-32298665)
chr6 (148-202)||(33817944-33817998)
chr6 (152-202)||(34225823-34225873)
chr6 (156-189)||(403882-403915)
chr6 (136-189)||(6327516-6327569)
chr6 (144-197)||(9027178-9027231)
chr6 (144-197)||(9629383-9629436)
chr6 (153-190)||(10770689-10770726)
chr6 (151-188)||(16388246-16388283)
chr6 (153-190)||(31384927-31384964)
chr6 (98-190)||(33419180-33419273)
chr6 (153-189)||(5970123-5970159)
chr6 (153-197)||(9107385-9107429)
chr6 (153-197)||(12696324-12696368)
chr6 (100-140)||(16766765-16766805)
chr6 (117-189)||(23771587-23771658)
chr6 (152-196)||(31579239-31579283)
[»] chr3 (59 HSPs)
chr3 (100-190)||(55401082-55401172)
chr3 (100-197)||(40993297-40993395)
chr3 (133-202)||(7928445-7928514)
chr3 (153-202)||(1509534-1509583)
chr3 (116-197)||(18426949-18427030)
chr3 (133-197)||(8383257-8383321)
chr3 (142-190)||(29508451-29508499)
chr3 (100-202)||(11251973-11252073)
chr3 (100-191)||(26492167-26492258)
chr3 (101-197)||(32804507-32804599)
chr3 (146-196)||(4201397-4201447)
chr3 (100-190)||(10954959-10955049)
chr3 (151-197)||(23870572-23870618)
chr3 (78-199)||(34307715-34307841)
chr3 (152-197)||(25064909-25064954)
chr3 (145-194)||(49505161-49505210)
chr3 (144-196)||(8039841-8039893)
chr3 (150-202)||(11313812-11313864)
chr3 (117-189)||(25093510-25093582)
chr3 (98-191)||(28918007-28918102)
chr3 (147-198)||(29112289-29112340)
chr3 (144-202)||(11665939-11665997)
chr3 (153-199)||(26508108-26508154)
chr3 (156-202)||(51206371-51206417)
chr3 (100-202)||(8789510-8789614)
chr3 (144-197)||(10690268-10690321)
chr3 (151-196)||(17005632-17005677)
chr3 (144-189)||(25326434-25326479)
chr3 (152-197)||(27277852-27277897)
chr3 (153-197)||(4987306-4987350)
chr3 (98-178)||(7171520-7171600)
chr3 (153-189)||(10268501-10268537)
chr3 (150-186)||(15314888-15314924)
chr3 (153-189)||(15796309-15796345)
chr3 (151-191)||(25948900-25948940)
chr3 (116-196)||(45451554-45451634)
chr3 (154-197)||(14979181-14979224)
chr3 (151-197)||(1514617-1514663)
chr3 (98-140)||(15796243-15796285)
chr3 (155-189)||(15864841-15864875)
chr3 (151-189)||(16789020-16789058)
chr3 (144-194)||(38731221-38731271)
chr3 (151-196)||(1550141-1550186)
chr3 (156-197)||(3164043-3164084)
chr3 (101-202)||(7614379-7614479)
chr3 (144-197)||(8842330-8842382)
chr3 (153-197)||(14747561-14747606)
chr3 (153-198)||(21257001-21257046)
chr3 (97-194)||(21419415-21419511)
chr3 (150-199)||(25355989-25356037)
chr3 (153-190)||(34910324-34910361)
chr3 (117-197)||(4466579-4466659)
chr3 (150-198)||(9624640-9624688)
chr3 (148-199)||(11690617-11690669)
chr3 (150-202)||(16192762-16192814)
chr3 (100-188)||(20503474-20503562)
chr3 (153-197)||(21479118-21479162)
chr3 (145-185)||(39002044-39002084)
chr3 (153-197)||(49651801-49651845)
[»] chr7 (54 HSPs)
chr7 (100-202)||(20549786-20549888)
chr7 (102-191)||(15680815-15680904)
chr7 (116-202)||(21864801-21864889)
chr7 (100-197)||(21880152-21880249)
chr7 (102-198)||(42720854-42720950)
chr7 (96-190)||(8234153-8234247)
chr7 (148-197)||(5235986-5236035)
chr7 (116-197)||(7197275-7197356)
chr7 (98-202)||(9778495-9778604)
chr7 (153-190)||(11831439-11831476)
chr7 (100-197)||(26733304-26733401)
chr7 (100-197)||(27093375-27093472)
chr7 (100-197)||(27184829-27184926)
chr7 (150-202)||(8160411-8160463)
chr7 (133-191)||(3721099-3721157)
chr7 (152-202)||(11890933-11890983)
chr7 (100-197)||(13770691-13770793)
chr7 (100-197)||(598208-598305)
chr7 (153-202)||(11061091-11061140)
chr7 (153-190)||(13300417-13300454)
chr7 (144-189)||(15902830-15902875)
chr7 (153-202)||(26033476-26033525)
chr7 (152-197)||(29787383-29787428)
chr7 (116-197)||(32287441-32287522)
chr7 (145-197)||(5548676-5548728)
chr7 (153-189)||(9408349-9408385)
chr7 (153-197)||(24339642-24339686)
chr7 (153-197)||(25481902-25481946)
chr7 (145-197)||(32308120-32308172)
chr7 (150-202)||(33384594-33384646)
chr7 (144-199)||(3520348-3520403)
chr7 (144-191)||(7328697-7328744)
chr7 (150-189)||(38143231-38143270)
chr7 (146-189)||(46644695-46644738)
chr7 (128-190)||(5956280-5956341)
chr7 (144-197)||(1433454-1433507)
chr7 (144-197)||(2948683-2948736)
chr7 (144-189)||(6326705-6326750)
chr7 (153-190)||(7058433-7058470)
chr7 (138-179)||(10478723-10478764)
chr7 (142-199)||(11665444-11665501)
chr7 (145-194)||(17851434-17851483)
chr7 (144-197)||(19206050-19206103)
chr7 (128-197)||(22868042-22868111)
chr7 (157-197)||(2034441-2034481)
chr7 (152-192)||(2424619-2424659)
chr7 (150-202)||(16341491-16341543)
chr7 (133-177)||(18213028-18213072)
chr7 (150-186)||(20654440-20654476)
chr7 (153-197)||(23191896-23191940)
chr7 (133-177)||(39138464-39138508)
chr7 (132-188)||(40287351-40287406)
chr7 (150-190)||(41020503-41020543)
chr7 (144-197)||(49088810-49088865)
[»] chr5 (47 HSPs)
chr5 (100-197)||(21191018-21191115)
chr5 (102-202)||(42893355-42893455)
chr5 (145-202)||(12927649-12927706)
chr5 (100-196)||(21576707-21576803)
chr5 (117-196)||(30502367-30502446)
chr5 (117-196)||(30542710-30542789)
chr5 (116-191)||(23012386-23012461)
chr5 (102-197)||(27932235-27932330)
chr5 (100-187)||(43564891-43564978)
chr5 (100-197)||(16304388-16304483)
chr5 (133-195)||(34879352-34879414)
chr5 (100-197)||(28588636-28588733)
chr5 (118-199)||(32630715-32630796)
chr5 (150-202)||(6471901-6471953)
chr5 (153-197)||(14674269-14674313)
chr5 (145-197)||(27144463-27144515)
chr5 (144-196)||(36838544-36838596)
chr5 (134-197)||(16203791-16203854)
chr5 (100-194)||(26312772-26312866)
chr5 (153-199)||(39698539-39698585)
chr5 (144-197)||(3966503-3966556)
chr5 (144-197)||(11685939-11685992)
chr5 (153-202)||(15405070-15405119)
chr5 (144-197)||(23220983-23221036)
chr5 (146-194)||(17593730-17593778)
chr5 (150-190)||(35017044-35017084)
chr5 (142-202)||(41091261-41091321)
chr5 (148-187)||(10022642-10022681)
chr5 (117-196)||(17123049-17123128)
chr5 (150-189)||(33035813-33035852)
chr5 (150-197)||(39205880-39205927)
chr5 (151-197)||(22013414-22013460)
chr5 (132-190)||(33178032-33178090)
chr5 (144-197)||(6035483-6035535)
chr5 (153-190)||(6247629-6247666)
chr5 (116-197)||(18421819-18421900)
chr5 (117-197)||(31084323-31084408)
chr5 (150-191)||(31682040-31682080)
chr5 (155-199)||(4344740-4344784)
chr5 (162-190)||(5894857-5894885)
chr5 (153-197)||(7677705-7677749)
chr5 (153-197)||(19579701-19579745)
chr5 (150-202)||(24273042-24273094)
chr5 (150-202)||(24389120-24389172)
chr5 (138-194)||(30098329-30098385)
chr5 (151-203)||(40131615-40131667)
chr5 (153-197)||(43001800-43001844)
[»] chr4 (57 HSPs)
chr4 (101-197)||(8423681-8423777)
chr4 (100-197)||(23292948-23293045)
chr4 (100-197)||(40006003-40006100)
chr4 (77-140)||(15724482-15724545)
chr4 (100-198)||(40179598-40179696)
chr4 (121-199)||(54580006-54580084)
chr4 (101-202)||(2361938-2362039)
chr4 (100-197)||(21945503-21945600)
chr4 (101-190)||(34306767-34306855)
chr4 (101-197)||(38846975-38847071)
chr4 (143-197)||(999353-999407)
chr4 (100-190)||(35157947-35158037)
chr4 (100-189)||(12895236-12895325)
chr4 (101-202)||(31800441-31800542)
chr4 (116-196)||(29205445-29205525)
chr4 (145-189)||(44081584-44081628)
chr4 (142-197)||(11931280-11931335)
chr4 (144-199)||(21720513-21720568)
chr4 (142-189)||(40742599-40742646)
chr4 (116-202)||(4157145-4157230)
chr4 (147-189)||(18491888-18491930)
chr4 (116-197)||(49431025-49431107)
chr4 (148-189)||(21539877-21539918)
chr4 (153-202)||(37203259-37203308)
chr4 (147-200)||(37698709-37698762)
chr4 (144-197)||(40613450-40613503)
chr4 (152-197)||(56257933-56257978)
chr4 (145-197)||(3712516-3712568)
chr4 (153-189)||(6485626-6485662)
chr4 (151-191)||(30838216-30838256)
chr4 (117-188)||(9996849-9996920)
chr4 (142-197)||(13134450-13134505)
chr4 (150-197)||(15029765-15029812)
chr4 (150-197)||(22440612-22440659)
chr4 (100-191)||(28964210-28964301)
chr4 (142-197)||(38148729-38148784)
chr4 (150-196)||(6863154-6863200)
chr4 (150-196)||(7214534-7214580)
chr4 (153-191)||(11596367-11596405)
chr4 (146-196)||(30522923-30522973)
chr4 (150-196)||(36635325-36635371)
chr4 (150-195)||(903924-903969)
chr4 (144-189)||(5775364-5775409)
chr4 (151-188)||(6273953-6273990)
chr4 (100-189)||(16073403-16073491)
chr4 (144-193)||(33950140-33950189)
chr4 (150-191)||(35952629-35952670)
chr4 (112-189)||(48139272-48139349)
chr4 (153-202)||(51701253-51701302)
chr4 (145-198)||(56488517-56488570)
chr4 (142-198)||(1213225-1213280)
chr4 (153-197)||(3947781-3947825)
chr4 (102-178)||(4157455-4157531)
chr4 (152-196)||(16189710-16189754)
chr4 (153-189)||(16303281-16303317)
chr4 (146-202)||(23861439-23861495)
chr4 (153-189)||(27706192-27706228)
[»] scaffold0050 (1 HSPs)
scaffold0050 (100-189)||(70286-70375)
[»] chr8 (42 HSPs)
chr8 (132-197)||(34897085-34897150)
chr8 (102-190)||(14134706-14134794)
chr8 (97-189)||(33405343-33405435)
chr8 (102-197)||(5813592-5813687)
chr8 (150-197)||(39954291-39954338)
chr8 (100-190)||(36450716-36450806)
chr8 (116-197)||(20679373-20679454)
chr8 (120-189)||(20873077-20873146)
chr8 (153-202)||(25566836-25566885)
chr8 (100-189)||(31580089-31580178)
chr8 (133-197)||(13844591-13844655)
chr8 (150-202)||(14731707-14731759)
chr8 (151-190)||(15816142-15816181)
chr8 (117-191)||(3025557-3025631)
chr8 (153-191)||(8342978-8343016)
chr8 (153-191)||(8343322-8343360)
chr8 (159-197)||(27101515-27101553)
chr8 (153-190)||(2572071-2572108)
chr8 (100-189)||(3677794-3677883)
chr8 (144-197)||(12606835-12606888)
chr8 (150-202)||(4611529-4611581)
chr8 (145-197)||(24362209-24362261)
chr8 (102-197)||(18407719-18407814)
chr8 (145-196)||(20785472-20785523)
chr8 (153-196)||(22197757-22197800)
chr8 (98-189)||(31557005-31557095)
chr8 (150-197)||(36934670-36934717)
chr8 (164-202)||(21465407-21465445)
chr8 (153-190)||(4948659-4948696)
chr8 (144-197)||(7658463-7658516)
chr8 (150-203)||(11803253-11803306)
chr8 (144-189)||(11927092-11927137)
chr8 (132-189)||(12985400-12985457)
chr8 (144-197)||(31236583-31236636)
chr8 (153-189)||(4298901-4298937)
chr8 (153-189)||(4673440-4673476)
chr8 (145-197)||(7472522-7472574)
chr8 (142-198)||(12570512-12570568)
chr8 (146-198)||(12570742-12570794)
chr8 (150-194)||(13018284-13018328)
chr8 (158-198)||(18067954-18067994)
chr8 (144-192)||(34222952-34223000)
[»] chr2 (51 HSPs)
chr2 (117-197)||(37411223-37411303)
chr2 (100-199)||(2438681-2438780)
chr2 (133-194)||(34691800-34691861)
chr2 (133-194)||(34714212-34714273)
chr2 (100-197)||(38117121-38117218)
chr2 (153-197)||(20539689-20539733)
chr2 (150-197)||(28677909-28677956)
chr2 (138-189)||(30527595-30527646)
chr2 (144-202)||(44860315-44860373)
chr2 (76-197)||(6940255-6940376)
chr2 (100-177)||(20242689-20242766)
chr2 (152-197)||(36409641-36409686)
chr2 (150-202)||(4207852-4207904)
chr2 (98-190)||(5367199-5367291)
chr2 (101-189)||(30404813-30404901)
chr2 (143-190)||(12940940-12940987)
chr2 (150-197)||(21616762-21616809)
chr2 (146-196)||(22084840-22084890)
chr2 (144-202)||(23718021-23718079)
chr2 (144-202)||(24105693-24105751)
chr2 (123-189)||(40361739-40361805)
chr2 (153-197)||(14996238-14996283)
chr2 (152-197)||(16069268-16069313)
chr2 (145-202)||(31808072-31808129)
chr2 (101-195)||(6290159-6290257)
chr2 (116-199)||(18840991-18841074)
chr2 (150-197)||(24975337-24975384)
chr2 (133-196)||(31018591-31018654)
chr2 (151-202)||(31456654-31456705)
chr2 (152-202)||(1327973-1328023)
chr2 (150-192)||(2423874-2423916)
chr2 (150-196)||(2665900-2665946)
chr2 (119-189)||(15972881-15972951)
chr2 (144-190)||(30335424-30335470)
chr2 (153-191)||(30717545-30717583)
chr2 (107-149)||(32355466-32355508)
chr2 (153-194)||(4882711-4882752)
chr2 (164-197)||(8950341-8950374)
chr2 (152-197)||(18276521-18276566)
chr2 (145-202)||(19614178-19614235)
chr2 (152-197)||(21782832-21782877)
chr2 (116-197)||(37558977-37559058)
chr2 (100-140)||(19580247-19580287)
chr2 (153-197)||(21374714-21374758)
chr2 (150-193)||(22556964-22557008)
chr2 (155-199)||(23354669-23354713)
chr2 (152-196)||(28412351-28412395)
chr2 (142-198)||(29970553-29970609)
chr2 (150-194)||(36281688-36281732)
chr2 (144-196)||(39279676-39279728)
chr2 (153-197)||(39323264-39323308)
[»] scaffold0697 (1 HSPs)
scaffold0697 (117-197)||(1644-1724)
[»] scaffold0652 (1 HSPs)
scaffold0652 (116-197)||(440-521)
[»] scaffold0123 (1 HSPs)
scaffold0123 (138-199)||(44525-44586)
[»] scaffold0361 (1 HSPs)
scaffold0361 (101-190)||(14537-14623)
[»] scaffold0011 (1 HSPs)
scaffold0011 (153-199)||(17764-17810)
[»] scaffold1528 (1 HSPs)
scaffold1528 (145-202)||(1030-1087)
[»] scaffold0003 (1 HSPs)
scaffold0003 (152-197)||(241594-241639)
[»] scaffold0223 (1 HSPs)
scaffold0223 (153-197)||(20172-20216)
[»] scaffold0103 (1 HSPs)
scaffold0103 (153-197)||(51811-51855)
[»] scaffold0024 (1 HSPs)
scaffold0024 (151-195)||(68255-68299)
[»] scaffold0722 (1 HSPs)
scaffold0722 (126-197)||(7020-7091)
[»] scaffold0227 (1 HSPs)
scaffold0227 (151-190)||(7324-7363)
[»] scaffold0020 (1 HSPs)
scaffold0020 (144-202)||(135318-135376)
[»] scaffold0122 (1 HSPs)
scaffold0122 (153-190)||(8017-8054)
[»] scaffold0039 (2 HSPs)
scaffold0039 (100-149)||(84924-84973)
scaffold0039 (144-197)||(84979-85032)
[»] scaffold0027 (1 HSPs)
scaffold0027 (144-189)||(46690-46735)
[»] scaffold0066 (1 HSPs)
scaffold0066 (153-197)||(33378-33422)
[»] scaffold0004 (1 HSPs)
scaffold0004 (153-197)||(92807-92851)


Alignment Details
Target: scaffold0022 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 91021 - 90851
Alignment:
Q  19 ccacatatataagaagtgatatacttaagaaatattgttgttgtttgctgtgtttcagactatgaagcacataaaataattggattaggcgtgttttggt 118  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||  ||||||| |||||||||||||||| | | ||||||||||||||||||||||    
T  91021 ccacatatataagaagtgatatacttcagaaatattgtggttgtttgaagtgtttcggactatgaagcacatacactcattggattaggcgtgttttggt 90922  T
Q  119 gtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    ||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||| |||||||||||    
T  90921 gtcggacacgtgttgtgtctgacatcgacatatataattacactgaattatatgattttctcaaattatta 90851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 1e-24; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 100 - 197
Target Start/End: Original strand, 46348345 - 46348442
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||| |||||||| | |||||||||||||||| |||||||| | |||||  | ||||||||||||||||||||||||||||||||||||||| |||||    
T  46348345 ggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtc 46348442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 100 - 202
Target Start/End: Complemental strand, 40181968 - 40181866
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtcag 199  Q
    |||||||||||||   ||||| ||||||||||||||||||| | ||| | ||||||||||||| |||||| ||||||| ||||||||||||| ||||| |    
T  40181968 ggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccgatacatataattacactgaattatgtgattttctcaaattattagcagtgtctg 40181869  T
Q  200 tgt 202  Q
    |||    
T  40181868 tgt 40181866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 100 - 197
Target Start/End: Original strand, 22515849 - 22515946
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||| | ||||||||| | |||| |||||||| | |||||  | ||||||||||||||||| ||||||||||||||||||||| |||||    
T  22515849 ggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 22515946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 18190086 - 18190170
Alignment:
Q  116 ggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtcagt 200  Q
    |||||||||||||||||||||| || |||||||  | |||||||||| |||||| | ||||||||||||||||||  ||||||||    
T  18190086 ggtgtcggacacgtgttgtgtctgacatcgacacttgtaattacactgaattatgtaattttttcaaattattaggtgtgtcagt 18190170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 18337409 - 18337338
Alignment:
Q  117 gtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattatt 188  Q
    |||||||||||||||||||||||| | |||||  | |||||||||| |||||| ||||||||||||||||||    
T  18337409 gtgtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 116 - 197
Target Start/End: Original strand, 5898244 - 5898325
Alignment:
Q  116 ggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||| |||||||||| ||||| || | ||||  ||||||||||||| |||||| ||||||||||| |||||||||||||||    
T  5898244 ggtgttggacacgtgtcgtgtctgacaccgacgcatataattacactgaattatgtgattttttcagattattagcggtgtc 5898325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 16927193 - 16927238
Alignment:
Q  146 acatatataattacactaaattatatgattttttcaaattattagc 191  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  16927193 acatatataattacactgaattatatgattttttcaaattattagc 16927238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 100 - 189
Target Start/End: Original strand, 40258895 - 40258984
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    |||||||||||||  |||||||||||| |||| ||||| || | |||||  | |||||||||| |||||| |||||||||||||||||||    
T  40258895 ggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 40258984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 190
Target Start/End: Complemental strand, 51410124 - 51410031
Alignment:
Q  98 ttggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatga-ttttttcaaattattag 190  Q
    ||||||||||||||| | ||||||||| |||||| |||||||| | |||||  | |||||||||| |||||| ||| |||||||||||||||||    
T  51410124 ttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattag 51410031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 199
Target Start/End: Original strand, 1486666 - 1486770
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatat-----cgacatatataattacactaaattatatgattttttcaaattattagcggt 194  Q
    |||||||||||||   |||||||||||||||| |||||||| |      |||||  |||||||||||| |||||| ||||||||||||||||||||| ||    
T  1486666 ggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgt 1486765  T
Q  195 gtcag 199  Q
    |||||    
T  1486766 gtcag 1486770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 197
Target Start/End: Complemental strand, 21530769 - 21530689
Alignment:
Q  117 gtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||| |||| |||||||| | |||||  |||||||| || ||||||||||||||| ||||||||||| |||||||    
T  21530769 gtgtcggacatgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtc 21530689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 189
Target Start/End: Original strand, 39130754 - 39130818
Alignment:
Q  125 cacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    |||||||||||||||| | ||||| |||||||||||||||||||||| ||||| | |||||||||    
T  39130754 cacgtgttgtgtccgacaccgacacatataattacactaaattatataattttctaaaattatta 39130818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 98 - 197
Target Start/End: Original strand, 2896081 - 2896180
Alignment:
Q  98 ttggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||| ||||   ||| |||||||| ||| ||||| || | |||||||||||  |||||| |||||| ||||||| |||||||||||||||||||    
T  2896081 ttggattaggtgtgtcccggtctcggacacatgtcgtgtctgacaccgacatatatagctacactgaattatgtgattttctcaaattattagcggtgtc 2896180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 48148043 - 48148098
Alignment:
Q  144 cgacatatataattacactaaattatatga-ttttttcaaattattagcggtgtca 198  Q
    ||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||    
T  48148043 cgacatatataattacactgaattatatgatttttttaaaattattagcggtgtca 48148098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 197
Target Start/End: Original strand, 398778 - 398824
Alignment:
Q  151 tataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||    
T  398778 tataattacactgaattatgtgattttttcaaattattagcggtgtc 398824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 38503373 - 38503315
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||| ||||||||||||| || ||||||||||| ||||||||||||||||||| ||||    
T  38503373 cgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcggtgt 38503315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 39953139 - 39953205
Alignment:
Q  131 ttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||| | ||||| ||| |||||||||||||||| ||||||| | |||||||||||||||||    
T  39953139 ttgtgtccgacaccgacacatacaattacactaaattatgtgattttctaaaattattagcggtgtc 39953205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 34257916 - 34257969
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||||||||||||||||| ||||||| | ||||||||| |||||||    
T  34257916 cgacatatataattacactaaattatgtgattttattaaattattaacggtgtc 34257969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 197
Target Start/End: Original strand, 38078623 - 38078720
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||||  |||||| | ||| |||| |||||||| | |||||  | |||||||| | |||||| ||||||||||||||||||||| |||||    
T  38078623 ggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtc 38078720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 26837754 - 26837806
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    |||||||||||||||||||||| |||||||||||||||||  | |||||||||    
T  26837754 atataattacactaaattatattattttttcaaattattattgatgtcagtgt 26837806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 197
Target Start/End: Complemental strand, 36878541 - 36878461
Alignment:
Q  117 gtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||| || | ||||| || | |||||  |||||||||||| |||||| ||||||| |||||||||||||||||||    
T  36878541 gtgtcggacatgtttcgtgtcagacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtc 36878461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 37598910 - 37598839
Alignment:
Q  118 tgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattag 190  Q
    |||||||||||||| |||||||| | |||||  |||||||||||| |||| | ||||||||||||||||||||    
T  37598910 tgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaatt-tgtgattttttcaaattattag 37598839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 196
Target Start/End: Original strand, 5927355 - 5927398
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    |||||||| |||||||||||||||||||||||||||||| ||||    
T  5927355 taattacattaaattatatgattttttcaaattattagcagtgt 5927398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 14332637 - 14332700
Alignment:
Q  133 gtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    |||||||| | ||| | |||||||||||||||||||| ||||||| |||||||||||| |||||    
T  14332637 gtgtccgacaccgagacatataattacactaaattatgtgattttctcaaattattagtggtgt 14332700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 197
Target Start/End: Original strand, 9629913 - 9629959
Alignment:
Q  151 tataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||| ||||| |||||||||||||| |||||||||||||||||||    
T  9629913 tataatcacactgaattatatgattttatcaaattattagcggtgtc 9629959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 128 - 190
Target Start/End: Original strand, 22881606 - 22881668
Alignment:
Q  128 gtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattag 190  Q
    |||| |||||||| | |||||  | ||||||||||||||||| ||||||||||||||||||||    
T  22881606 gtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 22881668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 34371766 - 34371709
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||| ||||||||||||| |||||| ||||||| || |||||||||||||||||||||    
T  34371766 cgacacatataattacactgaattatgtgattttctc-aattattagcggtgtcagtgt 34371709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 195
Target Start/End: Original strand, 8842678 - 8842771
Alignment:
Q  102 attaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtg 195  Q
    |||||||||||  || ||||||| |||||| |||||||| | | | | ||||||||||| ||||||||||| |||| |||||||| ||| ||||    
T  8842678 attaggcgtgtcctgatgtcggatacgtgtcgtgtccgacaccaatacatataattacattaaattatatgtttttctcaaattactagtggtg 8842771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 17754363 - 17754306
Alignment:
Q  145 gacatatataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    |||| ||||| ||||||| |||||| | ||||||||||||||||||||||||| ||||    
T  17754363 gacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgt 17754306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 197
Target Start/End: Original strand, 43492456 - 43492553
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||||   ||||||||||| |||||||||| || | ||||| | ||||||||||  |||||  ||||||| |||||||| ||| ||||||    
T  43492456 ggattaggcgtgtgccggtgtcggacatgtgttgtgtctgacaccgacacacataattacaccgaattacgtgattttctcaaattactagtggtgtc 43492553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 52903313 - 52903252
Alignment:
Q  133 gtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggt 194  Q
    |||||||| | ||||| ||||||||||||| |||||||||||||| | ||||||||| ||||    
T  52903313 gtgtccgacaccgacacatataattacactgaattatatgattttattaaattattaacggt 52903252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 113343 - 113299
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||| |||||| ||||||||||||||||||||| |||||    
T  113343 taattacactgaattatgtgattttttcaaattattagctgtgtc 113299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 191
Target Start/End: Original strand, 7353454 - 7353546
Alignment:
Q  100 ggattaggcgtgttttggtgtcggaca-cgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagc 191  Q
    ||||||||||||| |  |||||||| | |||||  ||| ||| | |||||||||||||||||||||||||| | |||||||| ||||| ||||    
T  7353454 ggattaggcgtgtctcagtgtcggaaaacgtgtcatgttcgacaccgacatatataattacactaaattatgtaattttttcgaattaatagc 7353546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 11605950 - 11605994
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||| |||| ||||||||||||||||||||||||||||| ||||    
T  11605950 taatttcactgaattatatgattttttcaaattattagcgatgtc 11605994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 189
Target Start/End: Original strand, 16164322 - 16164366
Alignment:
Q  145 gacatatataattacactaaattatatgattttttcaaattatta 189  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||    
T  16164322 gacacatataattacattaaattatgtgattttttcaaattatta 16164366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 22907318 - 22907390
Alignment:
Q  117 gtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    |||||||||| ||||||||||| | | |||||  |||||||| || ||||||||| ||||| |||||||||||    
T  22907318 gtgtcggacatgtgttgtgtcccacaccgacacttataattataccaaattatataattttctcaaattatta 22907390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 41877485 - 41877529
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||||||| | ||||| |||||||||||||||||||    
T  41877485 taattacactaaattatgtaattttctcaaattattagcggtgtc 41877529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 1864886 - 1864945
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtcagtgta 203  Q
    ||||| ||||||||||||| |||||| ||||||| ||||||||||| | ||||| |||||    
T  1864886 cgacacatataattacactgaattatgtgattttctcaaattattaactgtgtcggtgta 1864945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 9709884 - 9709821
Alignment:
Q  133 gtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    |||||||| | ||||| |||||||||||   |||||| ||||||| ||||||||||||||||||    
T  9709884 gtgtccgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgt 9709821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 98 - 197
Target Start/End: Complemental strand, 13997982 - 13997883
Alignment:
Q  98 ttggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||| |||||  ||||||  |||| |||| || ||| | | ||||| ||||||||||||| |||||| ||||||||| |||| |||| |||||||    
T  13997982 ttggattagacgtgtcatggtgtttgacatgtgtcgtctccaacaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtc 13997883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 154 - 189
Target Start/End: Complemental strand, 15323206 - 15323171
Alignment:
Q  154 aattacactaaattatatgattttttcaaattatta 189  Q
    |||||||||||||||| |||||||||||||||||||    
T  15323206 aattacactaaattatgtgattttttcaaattatta 15323171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 25098567 - 25098614
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||| |||||| ||||||| ||||||||| |||||||||    
T  25098567 atataattacactgaattatgtgattttctcaaattatcagcggtgtc 25098614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 28674896 - 28674801
Alignment:
Q  101 gattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    |||||||||||| |  |||| ||||| |||| ||||| || | | ||||||||||||| ||| |||||| | ||||| ||||||||||| ||||||    
T  28674896 gattaggcgtgtctcagtgttggacaagtgtcgtgtctgacaccaacatatataattatactgaattatgtaattttctcaaattattaacggtgt 28674801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 29229515 - 29229456
Alignment:
Q  144 cgacatatataattac-actaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||| |||||||||| ||||||| || ||||||| ||||||||||||| ||||||||||    
T  29229515 cgacacatataattaccactaaatcatgtgattttctcaaattattagcagtgtcagtgt 29229456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 202
Target Start/End: Complemental strand, 34298482 - 34298431
Alignment:
Q  151 tataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    |||||||||||| |||||| ||||||| |||||||||||| |||||| ||||    
T  34298482 tataattacactgaattatgtgattttctcaaattattagtggtgtcggtgt 34298431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 199
Target Start/End: Original strand, 42359411 - 42359510
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtcag 199  Q
    |||||||||||||   ||||||||||||  ||  ||||||| | |||||  | |||||||||| |||| | ||||||||||||||||||||  |||||||    
T  42359411 ggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagatgtgtcag 42359510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 196
Target Start/End: Original strand, 48450602 - 48450645
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||    
T  48450602 taattacactaaattatgttattttttcaaattattagctgtgt 48450645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 196
Target Start/End: Complemental strand, 6427397 - 6427351
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    ||||||||||| | |||||| ||||||| ||||||||||||||||||    
T  6427397 atataattacattgaattatgtgattttctcaaattattagcggtgt 6427351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 7918218 - 7918272
Alignment:
Q  145 gacatatataattacactaaattatatgattttttcaaattattagcggtgtcag 199  Q
    |||| ||||||||||||| |||||| ||||||| |||||||||||| | ||||||    
T  7918218 gacacatataattacactgaattatgtgattttctcaaattattagtgatgtcag 7918272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 199
Target Start/End: Original strand, 24577201 - 24577247
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtcag 199  Q
    |||||||||| |||||| ||||||||||||||||||||  |||||||    
T  24577201 taattacactgaattatgtgattttttcaaattattagttgtgtcag 24577247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 199
Target Start/End: Original strand, 28273103 - 28273149
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtcag 199  Q
    |||||||||| ||||||||||||||||||||| |||||  |||||||    
T  28273103 taattacactgaattatatgattttttcaaatgattagttgtgtcag 28273149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 34712390 - 34712436
Alignment:
Q  145 gacatatataattacactaaattatatgattttttcaaattattagc 191  Q
    |||| |||||||||||||||||||| | ||||| |||||||||||||    
T  34712390 gacacatataattacactaaattatgttattttctcaaattattagc 34712436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 35999320 - 35999374
Alignment:
Q  136 tccgatatcgacatatataattacactaaattatatgattttttcaaattattag 190  Q
    ||||| ||| ||| ||||||||| |||||||||||||||||| | ||||||||||    
T  35999320 tccgacatcaacacatataattatactaaattatatgattttcttaaattattag 35999374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 8010291 - 8010340
Alignment:
Q  142 atcgacatatataattacactaaattatatgattttttcaaattattagc 191  Q
    |||||||  |||||||| ||| |||||||| |||||||||||||||||||    
T  8010291 atcgacacttataattatactgaattatataattttttcaaattattagc 8010340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 9828097 - 9828044
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||| ||| ||||||||| |||||| ||||||| |||||||||||| ||||||    
T  9828097 cgacacataaaattacactgaattatgtgattttatcaaattattagtggtgtc 9828044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 17831537 - 17831590
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||| |||| |||||||| ||| || ||||||| |||||||||||||||||||    
T  17831537 cgacacatatgattacactgaataatgtgattttctcaaattattagcggtgtc 17831590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 20157356 - 20157409
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||| |||| |||||||| |||||| ||||||| ||| |||||||||||||||    
T  20157356 cgacacatatgattacactgaattatgtgattttctcacattattagcggtgtc 20157409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 22781489 - 22781440
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtcag 199  Q
    ||||||||| | | |||||||||||||| | |||||||||||||||||||    
T  22781489 atataattatatttaattatatgattttataaaattattagcggtgtcag 22781440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 194
Target Start/End: Complemental strand, 23804480 - 23804431
Alignment:
Q  145 gacatatataattacactaaattatatgattttttcaaattattagcggt 194  Q
    |||| ||||||||||| |||||||||| ||||| ||||||||||| ||||    
T  23804480 gacacatataattacattaaattatataattttatcaaattattaacggt 23804431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 31672910 - 31672959
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    |||||||||| |||||  ||||||||||||||||||||| ||||| ||||    
T  31672910 taattacactgaattaagtgattttttcaaattattagctgtgtcggtgt 31672959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 32461478 - 32461515
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattag 190  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  32461478 taattacattaaattatgtgattttttcaaattattag 32461515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 44482283 - 44482234
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcgg 193  Q
    ||||| ||||||||||||| |||||| ||||||| ||||||||| |||||    
T  44482283 cgacacatataattacactgaattatgtgattttctcaaattataagcgg 44482234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 1815353 - 1815265
Alignment:
Q  101 gattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    ||||||||||||   ||||||||||| |||| ||||| || | |||||  | |||||||||| |||||| ||||||||| |||| ||||    
T  1815353 gattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacacttgtaattacactgaattatgtgattttttaaaataatta 1815265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 12707885 - 12707925
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattag 190  Q
    |||||||| ||||||||||||||||||| | ||||||||||    
T  12707885 atataattgcactaaattatatgattttcttaaattattag 12707925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 12713339 - 12713379
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattag 190  Q
    |||||||||||||||||||| ||||||| | ||||||||||    
T  12713339 atataattacactaaattatgtgattttcttaaattattag 12713379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 12717430 - 12717470
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattag 190  Q
    |||||||||||||||||||| ||||||| | ||||||||||    
T  12717430 atataattacactaaattatgtgattttcttaaattattag 12717470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 14359537 - 14359580
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||||||| ||| ||||||||||||||||| |||||    
T  14359537 taattacactaaattatgtga-tttttcaaattattagctgtgtc 14359580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 17425105 - 17425157
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||||||||| | |||||| ||||||| ||||||||||| ||||||| ||||    
T  17425105 atataattacattgaattatgtgattttatcaaattattatcggtgtccgtgt 17425157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 18556471 - 18556515
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||| |||||||| |||| |||||||||||||||| |||||    
T  18556471 taattacattaaattatgtgatattttcaaattattagctgtgtc 18556515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 23738722 - 23738678
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||| |||| |||||| ||||||||||||||||||||| |||||    
T  23738722 taattgcactgaattatgtgattttttcaaattattagctgtgtc 23738678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 25361938 - 25361886
Alignment:
Q  145 gacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||| ||||||||||||| |||||| ||||||| ||||||||| || ||||||    
T  25361938 gacacatataattacactgaattatgtgattttctcaaattatcagtggtgtc 25361886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 8894 - 8798
Alignment:
Q  101 gattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||| | |||||||||||||||| |||||||| | |||||  | |||||||||||||| |||||||||||||||||||||||| |||||    
T  8894 gattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtc 8798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 69)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 98 - 197
Target Start/End: Original strand, 33001249 - 33001348
Alignment:
Q  98 ttggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||| ||| |||||| ||||||||| |||||||| | ||||| ||||||||||| | |||||| ||||||||||||||||||||| |||||    
T  33001249 ttggattaggcgtatttcggtgtcagacacgtgtcgtgtccgacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtc 33001348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 116 - 196
Target Start/End: Original strand, 7265571 - 7265651
Alignment:
Q  116 ggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    ||||||||||| || |||||||||| | ||||| ||||||||||||| |||||| ||||||| ||||||||||||||||||    
T  7265571 ggtgtcggacatgtattgtgtccgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgt 7265651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 100 - 190
Target Start/End: Original strand, 12627539 - 12627629
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattag 190  Q
    |||||||| |||| | ||||||||||| |||| |||||||| ||||||| |||| |||||||| |||||| ||||||||||| ||||||||    
T  12627539 ggattaggagtgtctcggtgtcggacatgtgtggtgtccgacatcgacacatattattacactgaattatgtgattttttcacattattag 12627629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 197
Target Start/End: Original strand, 17841551 - 17841648
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||| |  ||||||||||| ||| |||||||| | || ||  | ||||||||||||||||| ||||||||||||||||||||| |||||    
T  17841551 ggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 17841648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 7977793 - 7977889
Alignment:
Q  101 gattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||||| | |||||||||  |||||||||||| | |||||  | |||||||||| |||||| | ||||||||||||||||||| |||||    
T  7977793 gattaggcgtgtttcgttgtcggacatatgttgtgtccgacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtc 7977889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 102 - 202
Target Start/End: Complemental strand, 28715390 - 28715290
Alignment:
Q  102 attaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtcagtg 201  Q
    |||||||||||   ||||||| |||||||| |||||||| | |||||  | |||||||||| |||||| | ||||||||||||||||||| |||||||||    
T  28715390 attaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagccgtgtcagtg 28715291  T
Q  202 t 202  Q
    |    
T  28715290 t 28715290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 9658974 - 9658879
Alignment:
Q  102 attaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||  |||||| ||||||||| |||||  | | ||||| ||||||||||||| |||||| ||||||| | |||||||||||||||||    
T  9658974 attaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtc 9658879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 197
Target Start/End: Complemental strand, 7938162 - 7938116
Alignment:
Q  151 tataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  7938162 tataattacactaaattatatgattttttcaaattattagctgtgtc 7938116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 10842586 - 10842532
Alignment:
Q  143 tcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||||||||||||    
T  10842586 tcgacacatatgattacactaaattatgtgattttttcaaattattagcggtgtc 10842532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 34595215 - 34595141
Alignment:
Q  116 ggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattag 190  Q
    |||||| ||||||||| |||||||| | |||||  | |||||||||| |||||| ||||||||||||||||||||    
T  34595215 ggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 34595141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 19040421 - 19040352
Alignment:
Q  128 gtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||| |||||||| |  |||| ||||||||||||| |||||| ||||||| |||||||||||||||||||    
T  19040421 gtgtcgtgtccgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtc 19040352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 5462737 - 5462681
Alignment:
Q  146 acatatataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||||||||||||| | |||||| ||||||| ||||||||||| ||||||||||||    
T  5462737 acatatataattacaatgaattatgtgattttctcaaattattaacggtgtcagtgt 5462681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 197
Target Start/End: Original strand, 5732505 - 5732569
Alignment:
Q  133 gtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||| | ||||| |||||||||||||||| ||| ||||||| ||||||||||| |||||||    
T  5732505 gtgtccgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtc 5732569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 24832641 - 24832593
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcg 192  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||||||||    
T  24832641 cgacacatataattacactaaattataagattttctcaaattattagcg 24832593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 26314640 - 26314684
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattatt 188  Q
    ||||||||||||||||| | |||||||||||||||||||||||||    
T  26314640 cgacatatataattacattgaattatatgattttttcaaattatt 26314684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 199
Target Start/End: Original strand, 6898243 - 6898342
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtcag 199  Q
    ||||||||||||||| ||||| |||||||  | |||||||| | |||||  | |||||||||| |||||| | |||| |||||||||||||  |||||||    
T  6898243 ggattaggcgtgtttcggtgttggacacgcttcgtgtccgacaccgacacttgtaattacacttaattatgtaatttgttcaaattattagacgtgtcag 6898342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 191
Target Start/End: Complemental strand, 7086848 - 7086801
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagc 191  Q
    ||||| |||||||||||||||||||| ||||||| |||||||||||||    
T  7086848 cgacacatataattacactaaattatgtgattttctcaaattattagc 7086801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 7996390 - 7996437
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||| |||||||||||||| ||||||||||||| |||||    
T  7996390 atataattacactgaattatatgattttctcaaattattagcagtgtc 7996437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 8022411 - 8022364
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||| |||||||||||||| ||||||||||||| |||||    
T  8022411 atataattacactgaattatatgattttctcaaattattagcagtgtc 8022364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 10888986 - 10889033
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||||||    
T  10888986 atataatcacactaaattatgtgattttatcaaattattagcggtgtc 10889033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 24138473 - 24138426
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||| |||||| |||||||||||||||||||||||||||| |||||    
T  24138473 atataaatacacttaattatatgattttttcaaattattagcagtgtc 24138426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 28152179 - 28152105
Alignment:
Q  116 ggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagc 191  Q
    |||||||||||||||| |||||||| | |||||  | |||||||||| |||||| ||| |||||||||||||||||    
T  28152179 ggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtga-tttttcaaattattagc 28152105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 115 - 197
Target Start/End: Original strand, 1191677 - 1191759
Alignment:
Q  115 tggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||||| || |||||| | |||||||  | |||||||||| |||| | ||| ||||||||||||||||| |||||    
T  1191677 tggtgtcggacacgcgtcgtgtccaacatcgacacttgtaattacactgaattttgtgaatttttcaaattattagctgtgtc 1191759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 150 - 196
Target Start/End: Complemental strand, 7151459 - 7151413
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    ||||||||||||| |||||| |||||||||||||||||||| |||||    
T  7151459 atataattacacttaattatgtgattttttcaaattattagaggtgt 7151413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 100 - 197
Target Start/End: Complemental strand, 24645578 - 24645480
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatga-ttttttcaaattattagcggtgtc 197  Q
    ||||||| ||||| |||||||||||||||||| ||||| || | |||||  | ||| || ||| |||||| ||| |||||||||||||||||| |||||    
T  24645578 ggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccgacacttgtaactatactgaattatgtgatttttttcaaattattagctgtgtc 24645480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 154 - 196
Target Start/End: Original strand, 34447374 - 34447416
Alignment:
Q  154 aattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  34447374 aattacactaaattatatgattttatcaaattattaacggtgt 34447416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 190
Target Start/End: Original strand, 853818 - 853911
Alignment:
Q  97 attggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattag 190  Q
    |||||||||||||||| |   |||||||||| ||| || ||||| | |||||  | ||||| |||| |||||| ||||||||||||||||||||    
T  853818 attggattaggcgtgtctctatgtcggacacatgtcgtatccgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattag 853911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 197
Target Start/End: Complemental strand, 7378060 - 7377979
Alignment:
Q  116 ggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||  | ||| |||||||| | ||||| ||||||||||| | |||||| ||||||| ||||||| |||||||||||    
T  7378060 ggtgtcggatgcatgtcgtgtccgacaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgtc 7377979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 9025500 - 9025553
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||| ||||||||||||| |||||| ||||||| ||||||||||||| |||||    
T  9025500 cgacacatataattacactgaattatgtgattttctcaaattattagcagtgtc 9025553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 197
Target Start/End: Original strand, 13360335 - 13360431
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||| |  ||||||||||  ||||||||| || | ||| | ||||||||||||| |||||| ||||||| |||||||| ||| ||||||    
T  13360335 ggattaggcgtgtctcagtgtcggacat-tgttgtgtctgacaccgaaacatataattacactgaattatgtgattttctcaaattactagtggtgtc 13360431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 196
Target Start/End: Original strand, 13689505 - 13689550
Alignment:
Q  151 tataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    ||||||||||| ||||| ||||||||| ||||||||||||||||||    
T  13689505 tataattacacgaaattgtatgattttatcaaattattagcggtgt 13689550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 24614474 - 24614413
Alignment:
Q  133 gtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggt 194  Q
    |||||||| | | ||| ||| |||||||||||||||||| ||||||| ||||||||||||||    
T  24614474 gtgtccgacaccaacacatacaattacactaaattatataatttttttaaattattagcggt 24614413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 25096476 - 25096423
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||| ||||||||||| ||||| ||||||| |||||||||||| ||||||    
T  25096476 cgacatatgtaattacactagattatgtgattttctcaaattattagtggtgtc 25096423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 13851800 - 13851736
Alignment:
Q  133 gtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||| || ||||||| ||||||||||||| |||||  | ||||| |||||||||||||||||||    
T  13851800 gtgtcagacatcgacacatataattacactgaattacgttattttctcaaattattagcggtgtc 13851736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 16766741 - 16766697
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||| |||||| ||||||||||||||||||||| |||||    
T  16766741 taattacactgaattatgtgattttttcaaattattagctgtgtc 16766697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 197
Target Start/End: Original strand, 21924930 - 21924994
Alignment:
Q  133 gtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||| | ||||| ||||||||||||| |||||| |||| || ||||||||||||| |||||    
T  21924930 gtgtccgacaccgacacatataattacactgaattatttgatattctcaaattattagcagtgtc 21924994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 30866150 - 30866202
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    ||||| ||||||||||| | |||||| ||||||| ||||||||||||||||||    
T  30866150 cgacacatataattacattgaattatgtgattttctcaaattattagcggtgt 30866202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 32511679 - 32511727
Alignment:
Q  151 tataattacactaaattatatgattttttcaaattattagcggtgtcag 199  Q
    |||||||||||| |||||| ||||||| | |||||||||||||||||||    
T  32511679 tataattacactgaattatgtgattttcttaaattattagcggtgtcag 32511727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 197
Target Start/End: Original strand, 32978859 - 32978959
Alignment:
Q  98 ttggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatg-attttttcaaattattagcggtgt 196  Q
    ||||||||| |||||   ||||||||||| |||| |||||||| | |||||  | |||||||||| |||||| ||  |||||||||||||||||| ||||    
T  32978859 ttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacacttaattatgtgttttttttcaaattattagctgtgt 32978958  T
Q  197 c 197  Q
    |    
T  32978959 c 32978959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 202
Target Start/End: Complemental strand, 4878039 - 4877937
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatga-ttttttcaaattattagcggtgtca 198  Q
    |||||||||||||  || ||||||||| |||| |||||||| | |||||  | |||||| ||| |||||| ||| |||||||||||||||||| |||||     
T  4878039 ggattaggcgtgtcctg-tgtcggacatgtgtcgtgtccgacaccgacacttgtaattatacttaattatgtgacttttttcaaattattagctgtgtcg 4877941  T
Q  199 gtgt 202  Q
    ||||    
T  4877940 gtgt 4877937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 152 - 191
Target Start/End: Original strand, 8805586 - 8805625
Alignment:
Q  152 ataattacactaaattatatgattttttcaaattattagc 191  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  8805586 ataattacactaaattatgtgattttctcaaattattagc 8805625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 21142177 - 21142126
Alignment:
Q  138 cgatatcgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    ||||||||||| |||||| || ||| |||||||||||||| |||||||||||    
T  21142177 cgatatcgacacatataactagactgaattatatgattttctcaaattatta 21142126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 26562744 - 26562689
Alignment:
Q  142 atcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||| ||||||||||||| |||||| ||||||| ||||||| ||||| |||||    
T  26562744 atcgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtc 26562689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 33468389 - 33468440
Alignment:
Q  145 gacatatataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    |||||||||||||||| | |||||  | ||||||||||||||||||||||||    
T  33468389 gacatatataattacattgaattaagttattttttcaaattattagcggtgt 33468440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 196
Target Start/End: Complemental strand, 1532287 - 1532241
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    ||||||||||||| |||||| | ||||| ||||||||||||||||||    
T  1532287 atataattacactgaattatgtaattttatcaaattattagcggtgt 1532241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 2224270 - 2224232
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagc 191  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  2224270 taattacactgaattatatgatttttttaaattattagc 2224232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 197
Target Start/End: Complemental strand, 3398664 - 3398619
Alignment:
Q  151 tataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||| ||||||||||| |||||||||||||||| |||||    
T  3398664 tataattacactgaattatatgat-ttttcaaattattagctgtgtc 3398619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 9195760 - 9195806
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattag 190  Q
    ||||| |||||||||||||||||||| | ||||| ||||||||||||    
T  9195760 cgacacatataattacactaaattatgtcattttctcaaattattag 9195806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 197
Target Start/End: Original strand, 13364682 - 13364764
Alignment:
Q  115 tggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||| |||| || | |||||| | | ||||| |||| |||||||| |||||||||||||| ||||||||| ||| |||||    
T  13364682 tggtgtcagacatgtatcgtgtccaacaccgacacatatgattacactgaattatatgattttctcaaattataagcagtgtc 13364764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 197
Target Start/End: Original strand, 17341677 - 17341723
Alignment:
Q  151 tataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||| |||||| ||||||| ||||||||||| |||||||    
T  17341677 tataattacactgaattatgtgattttatcaaattattaacggtgtc 17341723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 25038077 - 25038131
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtca 198  Q
    |||||| | ||||||||||||||||| | ||||| ||||||||||| ||||||||    
T  25038077 cgacatttgtaattacactaaattatgtaattttctcaaattattaacggtgtca 25038131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 26178687 - 26178733
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattag 190  Q
    ||||| |||| ||||||||||||||| ||||||| ||||||||||||    
T  26178687 cgacacatatgattacactaaattatgtgattttatcaaattattag 26178733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 196
Target Start/End: Original strand, 32298571 - 32298665
Alignment:
Q  102 attaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    |||||||||||| |||||| |||||  |||  |||| || | | ||| |||||||||||||||||||| ||||  | | ||||||||||||||||    
T  32298571 attaggcgtgttctggtgttggacatatgtcatgtctgacaccaacacatataattacactaaattatgtgatgatcttaaattattagcggtgt 32298665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 33817998 - 33817944
Alignment:
Q  148 atatataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||||||||||||| ||||||   ||||| || |||||||||||||||||||||    
T  33817998 atatataattacactgaattatgaaattttctccaattattagcggtgtcagtgt 33817944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 34225823 - 34225873
Alignment:
Q  152 ataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||||||||| ||||||  |||||||||||||||||||  ||||||||||    
T  34225823 ataattacactgaattatgcgattttttcaaattattagttgtgtcagtgt 34225873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 189
Target Start/End: Original strand, 403882 - 403915
Alignment:
Q  156 ttacactaaattatatgattttttcaaattatta 189  Q
    |||||||||||||| |||||||||||||||||||    
T  403882 ttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 6327516 - 6327569
Alignment:
Q  136 tccgatatcgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    ||||| |||||||  | |||||||||| |||||||| |||||||||||||||||    
T  6327516 tccgacatcgacacttgtaattacacttaattatataattttttcaaattatta 6327569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 9027231 - 9027178
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||| ||||||||||||  |||||| ||||| | |||||||||||||||||||    
T  9027231 cgacacatataattacacggaattatgtgattatctcaaattattagcggtgtc 9027178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 9629436 - 9629383
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||| ||||||||||| | |||||| ||||||| |||||||||| ||||||||    
T  9629436 cgacacatataattacattgaattatgtgattttctcaaattattggcggtgtc 9629383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 10770689 - 10770726
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattag 190  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  10770689 taattacactgaattatgtgattttttcaaattattag 10770726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 16388246 - 16388283
Alignment:
Q  151 tataattacactaaattatatgattttttcaaattatt 188  Q
    |||||||||||| |||||| ||||||||||||||||||    
T  16388246 tataattacactgaattatgtgattttttcaaattatt 16388283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 31384964 - 31384927
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattag 190  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  31384964 taattacactgaattatgtgattttttcaaattattag 31384927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 190
Target Start/End: Complemental strand, 33419273 - 33419180
Alignment:
Q  98 ttggattaggcgtgttttggtgtcggacacgtgttg-tgtccgatatcgacatatataattacactaaattatatgattttttcaaattattag 190  Q
    ||||||||||| |||  |||||| ||||||| |||| |||| || | | ||| ||||||||||| | |||||||| | ||||||||||||||||    
T  33419273 ttggattaggcatgtcctggtgttggacacgcgttggtgtctgacaccaacacatataattacattgaattatatcaatttttcaaattattag 33419180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 5970123 - 5970159
Alignment:
Q  153 taattacactaaattatatgattttttcaaattatta 189  Q
    |||||||||| |||||| |||||||||||||||||||    
T  5970123 taattacactgaattatgtgattttttcaaattatta 5970159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 9107385 - 9107429
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||| |||| | ||||||||||||||||||||| |||||    
T  9107385 taattacactgaattttgtgattttttcaaattattagctgtgtc 9107429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 12696368 - 12696324
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||| |||||| | ||||||||||||||||||| |||||    
T  12696368 taattacactgaattatgtaattttttcaaattattagctgtgtc 12696324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 140
Target Start/End: Complemental strand, 16766805 - 16766765
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccga 140  Q
    |||||||||||||   |||||||||||||||||||||||||    
T  16766805 ggattaggcgtgtcccggtgtcggacacgtgttgtgtccga 16766765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 23771658 - 23771587
Alignment:
Q  117 gtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    ||||||||||| ||| |||||||| | |||||| | |||||||||| || ||||| ||||||| |||||||||    
T  23771658 gtgtcggacacatgtcgtgtccgacaccgacatttgtaattacactgaagtatataatttttt-aaattatta 23771587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 31579239 - 31579283
Alignment:
Q  152 ataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    ||||||||||| |||||| ||||||| ||||||||||| ||||||    
T  31579239 ataattacactgaattatgtgattttctcaaattattaacggtgt 31579283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 8e-23; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 100 - 190
Target Start/End: Complemental strand, 55401172 - 55401082
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattag 190  Q
    ||||||||||||| | |||||||||||||||| |||||||| | |||||  | ||||||||||||||||| ||||||||||||||||||||    
T  55401172 ggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 55401082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 100 - 197
Target Start/End: Original strand, 40993297 - 40993395
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatga-ttttttcaaattattagcggtgtc 197  Q
    |||||||||||||   ||||||||||| |||| |||||||| | ||||| ||||||||||||| |||||| ||| |||||| |||||||||||||||||    
T  40993297 ggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgattttttttaaattattagcggtgtc 40993395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 7928514 - 7928445
Alignment:
Q  133 gtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    |||||||| | ||||| ||||||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  7928514 gtgtccgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcggtgt 7928445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 1509583 - 1509534
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  1509583 taattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 1509534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 116 - 197
Target Start/End: Complemental strand, 18427030 - 18426949
Alignment:
Q  116 ggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||| ||||||||||| || ||||| | ||||||||||||||||||  |||||| ||||||||| |||||||||| ||||||    
T  18427030 ggtgccggacacgtgtcgtatccgacaccgacatatataattacaccgaattatgtgattttttgaaattattagtggtgtc 18426949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 8383321 - 8383257
Alignment:
Q  133 gtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||| | |||||  |||||||||||| |||||||||||||| |||||||||||||||||||    
T  8383321 gtgtccgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtc 8383257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 29508499 - 29508451
Alignment:
Q  142 atcgacatatataattacactaaattatatgattttttcaaattattag 190  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  29508499 atcgacacatataattacactgaattatatgattttttcaaattattag 29508451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 100 - 202
Target Start/End: Complemental strand, 11252073 - 11251973
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtcag 199  Q
    ||||||||||||||  | || ||||||||||||||||| || | ||||| |||  |||||||| |||||| ||||||| |||||||||||||  ||||||    
T  11252073 ggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgacacata--attacactgaattatgtgattttctcaaattattagcaatgtcag 11251976  T
Q  200 tgt 202  Q
    |||    
T  11251975 tgt 11251973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 100 - 191
Target Start/End: Original strand, 26492167 - 26492258
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagc 191  Q
    ||||||| ||||| |||||||| |||| |||| |||||||| | ||| |  | |||||||||| |||| |||||||||||||||||||||||    
T  26492167 ggattagacgtgtcttggtgtcagacatgtgtcgtgtccgacaccgatacttgtaattacactgaattgtatgattttttcaaattattagc 26492258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 32804507 - 32804599
Alignment:
Q  101 gattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||| |||  ||| |||||| |||| ||||||||    |||| |||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  32804507 gattaggcgtttttcagtggcggacatgtgtcgtgtccga----gacacatataattacactaaattatgtgattttctcaaattattaacggtgtc 32804599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 4201447 - 4201397
Alignment:
Q  146 acatatataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    ||||||||||||||||| |||||| ||||||||||||||||||| ||||||    
T  4201447 acatatataattacacttaattatgtgattttttcaaattattaacggtgt 4201397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 190
Target Start/End: Complemental strand, 10955049 - 10954959
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattag 190  Q
    |||||||||||||    ||||||||||||||| |||||||| | |||||  | | |||||||| |||||| ||||||||||||||||||||    
T  10955049 ggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatgtgattttttcaaattattag 10954959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 197
Target Start/End: Original strand, 23870572 - 23870618
Alignment:
Q  151 tataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||    
T  23870572 tataatcacactgaattatatgattttttcaaattattagcggtgtc 23870618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 199
Target Start/End: Original strand, 34307715 - 34307841
Alignment:
Q  78 ctatgaagcacataaaataattggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacata-----tataattacactaaattatatg 172  Q
    |||||||||||||||| | |||||||||||||||| |  || ||| | |||||| |||||||| | |||||       |||||||||||| || ||| ||    
T  34307715 ctatgaagcacataaatttattggattaggcgtgtctcagtatcgaagacgtgtcgtgtccgacaccgacacgacacttataattacactgaaatatgtg 34307814  T
Q  173 attttttcaaattattagcggtgtcag 199  Q
    ||||| |||||||||||||||||||||    
T  34307815 attttctcaaattattagcggtgtcag 34307841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 25064954 - 25064909
Alignment:
Q  152 ataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||    
T  25064954 ataattacactaaattatgtgattttttcaaatcattagcggtgtc 25064909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 49505161 - 49505210
Alignment:
Q  145 gacatatataattacactaaattatatgattttttcaaattattagcggt 194  Q
    |||| |||||||||||||||||||| ||||||| ||||||||||||||||    
T  49505161 gacacatataattacactaaattatgtgattttctcaaattattagcggt 49505210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 8039841 - 8039893
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    ||||| ||||||||||||| |||||||| ||||| ||||||||||||||||||    
T  8039841 cgacacatataattacactgaattatataattttctcaaattattagcggtgt 8039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 11313812 - 11313864
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    |||||||||||||||||||| ||||||| ||||||||||||| ||||| ||||    
T  11313812 atataattacactaaattatgtgattttctcaaattattagcagtgtcggtgt 11313864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 25093582 - 25093510
Alignment:
Q  117 gtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    |||||||||| ||||||||||||| | ||||| ||||||||||||| |||| | ||||||| |||||| ||||    
T  25093582 gtgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattgtgtgattttctcaaatcatta 25093510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 191
Target Start/End: Complemental strand, 28918102 - 28918007
Alignment:
Q  98 ttggattaggcgtgttttggtgtcggacacgtgttgtgtcc--gatatcgacatatataattacactaaattatatgattttttcaaattattagc 191  Q
    |||||||||||||||    ||||||||||||||| ||||||  || | |||||  | |||||||||| |||||| |||||||||||||||||||||    
T  28918102 ttggattaggcgtgtcccagtgtcggacacgtgtcgtgtccacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 28918007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 198
Target Start/End: Original strand, 29112289 - 29112340
Alignment:
Q  147 catatataattacactaaattatatgattttttcaaattattagcggtgtca 198  Q
    |||||||||||||||| |||||||||||||| |||||| ||||| |||||||    
T  29112289 catatataattacactgaattatatgattttctcaaataattagtggtgtca 29112340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 11665997 - 11665939
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||| |||||||||||||||||| | ||||||| |||||||||||||| |||| ||||    
T  11665997 cgacacatataattacactaaattgtgtgattttatcaaattattagcgttgtcggtgt 11665939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 153 - 199
Target Start/End: Complemental strand, 26508154 - 26508108
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtcag 199  Q
    |||||||||| |||||| ||||||||||||||||||||| |||||||    
T  26508154 taattacactgaattatgtgattttttcaaattattagctgtgtcag 26508108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 51206371 - 51206417
Alignment:
Q  156 ttacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||||| |||||| ||||||||||||||||||||| ||||||||||    
T  51206371 ttacactgaattatgtgattttttcaaattattagctgtgtcagtgt 51206417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 202
Target Start/End: Original strand, 8789510 - 8789614
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgtt--gtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||| | |||||| |||| ||||   |||||||| | ||||| ||||||||||||  |||||| ||||||| ||||||||| ||| |||||    
T  8789510 ggattaggcgtgtctcggtgtccgacatgtgtgtcgtgtccgacaccgacacatataattacacggaattatgtgattttctcaaattataagccgtgtc 8789609  T
Q  198 agtgt 202  Q
     ||||    
T  8789610 ggtgt 8789614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 10690268 - 10690321
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||| ||||||||||||| |||||| ||||||| ||| |||||||||||||||    
T  10690268 cgacaaatataattacactgaattatgtgattttctcagattattagcggtgtc 10690321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 196
Target Start/End: Original strand, 17005632 - 17005677
Alignment:
Q  151 tataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    |||||||||||| |||||||||||||| |||||||||||| |||||    
T  17005632 tataattacactgaattatatgattttatcaaattattagtggtgt 17005677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 25326479 - 25326434
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    |||||| ||||||||||||||||||||| ||||||| |||||||||    
T  25326479 cgacatctataattacactaaattatattatttttttaaattatta 25326434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 27277852 - 27277897
Alignment:
Q  152 ataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||||||||| ||||||| ||||||||||||| |||||    
T  27277852 ataattacactaaattatgtgattttctcaaattattagcagtgtc 27277897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 4987306 - 4987350
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||| |||||| ||||||||||||||||||||| |||||    
T  4987306 taattacactgaattatgtgattttttcaaattattagctgtgtc 4987350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 178
Target Start/End: Complemental strand, 7171600 - 7171520
Alignment:
Q  98 ttggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttt 178  Q
    |||||||||||||||   |||||||||||||||| |||||||| | | |||  | |||||||||  |||||||||||||||    
T  7171600 ttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacaccaacacttgtaattacaccgaattatatgattttt 7171520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 10268501 - 10268537
Alignment:
Q  153 taattacactaaattatatgattttttcaaattatta 189  Q
    ||||||||||||||||| |||||||||||||||||||    
T  10268501 taattacactaaattatgtgattttttcaaattatta 10268537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 15314888 - 15314924
Alignment:
Q  150 atataattacactaaattatatgattttttcaaatta 186  Q
    |||||||||||||||||||| ||||||||||||||||    
T  15314888 atataattacactaaattatgtgattttttcaaatta 15314924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 15796309 - 15796345
Alignment:
Q  153 taattacactaaattatatgattttttcaaattatta 189  Q
    |||||||||| ||||||||||||||||||||||||||    
T  15796309 taattacactgaattatatgattttttcaaattatta 15796345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 25948900 - 25948940
Alignment:
Q  151 tataattacactaaattatatgattttttcaaattattagc 191  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  25948900 tataattacactgaattatgtgattttttcaaattattagc 25948940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 196
Target Start/End: Complemental strand, 45451634 - 45451554
Alignment:
Q  116 ggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    ||||||||||| |||| |||||||| | ||||| |||| |||| ||| || ||| ||||||| ||||||||||||| ||||    
T  45451634 ggtgtcggacatgtgtcgtgtccgacaccgacacatattattatactgaagtatgtgattttctcaaattattagcagtgt 45451554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 154 - 197
Target Start/End: Complemental strand, 14979224 - 14979181
Alignment:
Q  154 aattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||| |||||| ||||||||||||||||||||| |||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtgtc 14979181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 197
Target Start/End: Complemental strand, 1514663 - 1514617
Alignment:
Q  151 tataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||||||||||  | || |||||||||||||||||||||    
T  1514663 tataattacactaaattatgcgtttctttcaaattattagcggtgtc 1514617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 140
Target Start/End: Original strand, 15796243 - 15796285
Alignment:
Q  98 ttggattaggcgtgttttggtgtcggacacgtgttgtgtccga 140  Q
    ||||||||||||||||  ||||| |||||||||||||||||||    
T  15796243 ttggattaggcgtgttccggtgttggacacgtgttgtgtccga 15796285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 189
Target Start/End: Complemental strand, 15864875 - 15864841
Alignment:
Q  155 attacactaaattatatgattttttcaaattatta 189  Q
    ||||||||||||||||| |||||||||||||||||    
T  15864875 attacactaaattatatcattttttcaaattatta 15864841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 16789058 - 16789020
Alignment:
Q  151 tataattacactaaattatatgattttttcaaattatta 189  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  16789058 tataattacactgaattatatgatttttttaaattatta 16789020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 38731271 - 38731221
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggt 194  Q
    ||||| |||||| |||||| |||||| ||||||||| ||||||||||||||    
T  38731271 cgacacatataactacactgaattatgtgattttttaaaattattagcggt 38731221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 151 - 196
Target Start/End: Complemental strand, 1550186 - 1550141
Alignment:
Q  151 tataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    |||||||||||| |||  | ||||||||||||||||||||||||||    
T  1550186 tataattacactgaatagtgtgattttttcaaattattagcggtgt 1550141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 3164043 - 3164084
Alignment:
Q  156 ttacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||| |||||| ||||||||||||||||||||| |||||    
T  3164043 ttacactgaattatgtgattttttcaaattattagctgtgtc 3164084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 7614379 - 7614479
Alignment:
Q  101 gattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtcagt 200  Q
    |||||||||||| ||| |||| ||| ||||  |||| ||| | ||||||||||||||| ||| |||||| ||||||| | ||||||||| | ||||| ||    
T  7614379 gattaggcgtgtcttgatgtcagac-cgtgccgtgttcgacaccgacatatataattatactgaattatgtgattttcttaaattattaactgtgtcggt 7614477  T
Q  201 gt 202  Q
    ||    
T  7614478 gt 7614479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 8842382 - 8842330
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||||||||| ||||||| ||| ||||  |||||||||||||||||    
T  8842382 cgacatatataattacaccaaattatgtga-ttttcaaaattattagcggtgtc 8842330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 14747606 - 14747561
Alignment:
Q  153 taattacactaaattatatga-ttttttcaaattattagcggtgtc 197  Q
    ||||||||||||||||| ||| |||||||||||||||||| |||||    
T  14747606 taattacactaaattatgtgatttttttcaaattattagctgtgtc 14747561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 21257001 - 21257046
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtca 198  Q
    |||||| ||| |||||| ||||||||||||||||||||| ||||||    
T  21257001 taattatactgaattatgtgattttttcaaattattagctgtgtca 21257046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 21419415 - 21419511
Alignment:
Q  97 attggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggt 194  Q
    |||| ||||||||||||| ||||| ||||| || | |||| ||| | | ||||||||||||||| | |||||||| ||||| | ||||||||| ||||    
T  21419415 attgaattaggcgtgtttcggtgt-ggacatgtatggtgttcgacaccaacatatataattacattgaattatattattttcttaaattattaacggt 21419511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 25356037 - 25355989
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtcag 199  Q
    |||||||||| |||||||||||||||| || ||||||||||| |||||||    
T  25356037 atataattacgctaaattatatgatttctt-aaattattagctgtgtcag 25355989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 34910361 - 34910324
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattag 190  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  34910361 taattacactgaattatgtgattttttcaaattattag 34910324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 197
Target Start/End: Original strand, 4466579 - 4466659
Alignment:
Q  117 gtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||| | |||| ||||| | || || |||||  |||||| |||||||||||||| | ||||||||| |||||||    
T  4466579 gtgtcggacacatcttgtatccgacaccggcacatatagctacactgaattatatgattttcttaaattattaccggtgtc 4466659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 9624688 - 9624640
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtca 198  Q
    ||||||||||| | |||||| ||||||| ||||||||||||| ||||||    
T  9624688 atataattacattgaattatgtgattttctcaaattattagcagtgtca 9624640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 11690617 - 11690669
Alignment:
Q  148 atatataattacactaaattatatg-attttttcaaattattagcggtgtcag 199  Q
    ||||||||||| ||||||||||||| ||||||| ||||||||| |||| ||||    
T  11690617 atatataattatactaaattatatgaatttttttaaattattaacggtatcag 11690669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 16192762 - 16192814
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||||||||||| |||||| | ||||| ||||||||||| ||||||| ||||    
T  16192762 atataattacactgaattatgttattttctcaaattattaacggtgtcggtgt 16192814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 20503562 - 20503474
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattatt 188  Q
    |||||||||||||   |||||| |||| |||| |||||| | | |||||  | |||||||||| |||||| | ||||||||||||||||    
T  20503562 ggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtcattttttcaaattatt 20503474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 21479162 - 21479118
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||| |||| | ||||||||||||||||||||| |||||    
T  21479162 taattacactgaattgtgtgattttttcaaattattagctgtgtc 21479118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 39002084 - 39002044
Alignment:
Q  145 gacatatataattacactaaattatatgattttttcaaatt 185  Q
    |||||||||||||||| | |||||| |||||||||||||||    
T  39002084 gacatatataattacattgaattatgtgattttttcaaatt 39002044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 49651801 - 49651845
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||| | |||||| ||||||||||||||||||||| |||||    
T  49651801 taattacagtgaattatgtgattttttcaaattattagccgtgtc 49651845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 100 - 202
Target Start/End: Complemental strand, 20549888 - 20549786
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtcag 199  Q
    ||||||||||||| |   ||||||||| ||||||||||||| | ||||| ||||||||||||| |||||  ||||||| ||||||||||||||||||| |    
T  20549888 ggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcgg 20549789  T
Q  200 tgt 202  Q
    |||    
T  20549788 tgt 20549786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 15680904 - 15680815
Alignment:
Q  102 attaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagc 191  Q
    ||||| ||||| | |||||||||||||||| |||||||| | |||||  ||||||||||||||||||| |||||||||  ||||||||||    
T  15680904 attagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactaaattatgtgattttttttaattattagc 15680815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 202
Target Start/End: Complemental strand, 21864889 - 21864801
Alignment:
Q  116 ggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgatt--ttttcaaattattagcggtgtcagtgt 202  Q
    |||||||||||||||| |||||||| | |||||  | |||||||||||||||||||||||  |||||||||||||||| ||||| ||||    
T  21864889 ggtgtcggacacgtgtcgtgtccgacagcgacacttgtaattacactaaattatatgattttttttcaaattattagctgtgtccgtgt 21864801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 100 - 197
Target Start/End: Complemental strand, 21880249 - 21880152
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||||  |||||||||||| |||| |||||||| | |||||  | |||||||||| |||||| | ||||| |||||||||||||| ||||    
T  21880249 ggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtc 21880152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 42720854 - 42720950
Alignment:
Q  102 attaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtca 198  Q
    ||||| ||||||  ||||| | |||| ||||||||| || |  |||| ||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  42720854 attagacgtgttccggtgttgtacacatgttgtgtcagacactgacacatataattacatttaattatgtgattttttcaaattattagcggtgtca 42720950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 190
Target Start/End: Complemental strand, 8234247 - 8234153
Alignment:
Q  96 aattggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattag 190  Q
    ||||||||||||||||| | ||||||||||| |||| |||||||| | || ||  | ||| |||||| |||||| | ||||||||||||||||||    
T  8234247 aattggattaggcgtgtctcggtgtcggacatgtgtcgtgtccgacaccggcacttgtaactacactgaattatgttattttttcaaattattag 8234153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 197
Target Start/End: Complemental strand, 5236035 - 5235986
Alignment:
Q  148 atatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||||||||||||||| ||||| | |||||||||||||||||    
T  5236035 atatataattacactaaattatataattttcttaaattattagcggtgtc 5235986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 197
Target Start/End: Original strand, 7197275 - 7197356
Alignment:
Q  116 ggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||| ||||||||||||| | |||||  | |||||||| | ||||| |||||||||| ||||||||||| |||||    
T  7197275 ggtgtcggacatgtgttgtgtccgacaccgacacttgtaattacattgaattaaatgatttttttaaattattagctgtgtc 7197356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 202
Target Start/End: Complemental strand, 9778604 - 9778495
Alignment:
Q  98 ttggattaggcgtgttttggtgtcggacacgtgttgtgtc-----cgatatcgacatatataattacactaaattatatgattttttcaaattattagcg 192  Q
    |||||||||||||||   ||||||||||||||||||||||     ||| | |||||  | |||||| ||| |||||| ||||||||||||||||| |||     
T  9778604 ttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacacgacaccgacacttgtaattatactgaattatgtgattttttcaaattatcagct 9778505  T
Q  193 gtgtcagtgt 202  Q
    ||||||||||    
T  9778504 gtgtcagtgt 9778495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 11831476 - 11831439
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattag 190  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11831476 taattacactaaattatatgattttttcaaattattag 11831439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 197
Target Start/End: Complemental strand, 26733401 - 26733304
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||||   || ||||||| | || |||||||| | ||||| || |||||| ||| |||||| ||||||| |||||||||||||||||||    
T  26733401 ggattaggcgtgttcccgtatcggacatgcgtcgtgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtc 26733304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 197
Target Start/End: Original strand, 27093375 - 27093472
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||| ||||  | ||||||||||| ||| |||||  | | ||||  |||||||||||||||||||| ||||||| | |||||||||||||||||    
T  27093375 ggattaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtc 27093472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 197
Target Start/End: Complemental strand, 27184926 - 27184829
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||| ||||  | ||||||||||| ||| |||||  | | ||||  |||||||||||||||||||| ||||||| | |||||||||||||||||    
T  27184926 ggattaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtc 27184829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 8160463 - 8160411
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    |||||||||||||||||||| | ||||| | ||||||||||||||||||||||    
T  8160463 atataattacactaaattatgtaattttcttaaattattagcggtgtcagtgt 8160411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 191
Target Start/End: Complemental strand, 3721157 - 3721099
Alignment:
Q  133 gtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagc 191  Q
    |||||||| | ||||| ||||||||| |||||||||| ||||||| |||||||||||||    
T  3721157 gtgtccgacaccgacacatataattatactaaattatgtgattttctcaaattattagc 3721099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 11890933 - 11890983
Alignment:
Q  152 ataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||||||||| |||||||||||||||||||||||||| | || |||||||    
T  11890933 ataattacactgaattatatgattttttcaaattattaaccgtatcagtgt 11890983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 100 - 197
Target Start/End: Complemental strand, 13770793 - 13770691
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtc-----cgatatcgacatatataattacactaaattatatgattttttcaaattattagcggt 194  Q
    ||||||||||||||  ||||||||||||||||||||||     ||| | |||||  | |||||||||| |||||| | ||||||| ||||||||||| ||    
T  13770793 ggattaggcgtgttccggtgtcggacacgtgttgtgtccgacacgacaacgacacttgtaattacactgaattatgtaatttttttaaattattagctgt 13770694  T
Q  195 gtc 197  Q
    |||    
T  13770693 gtc 13770691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 197
Target Start/End: Complemental strand, 598305 - 598208
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||||   |||||||||||||||| ||||| || | |||||  || ||||||| | |||||  ||||||| | |||||||||||||||||    
T  598305 ggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattacatttaattacgtgattttcttaaattattagcggtgtc 598208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 11061091 - 11061140
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    |||||| |||||||||| ||||||||||||||||||||| ||||| ||||    
T  11061091 taattatactaaattatgtgattttttcaaattattagctgtgtcggtgt 11061140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 13300454 - 13300417
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattag 190  Q
    |||||||||| |||||||||||||||||||||||||||    
T  13300454 taattacactgaattatatgattttttcaaattattag 13300417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 15902875 - 15902830
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    ||||| |||||||||||||||||||| ||||||| |||||||||||    
T  15902875 cgacacatataattacactaaattatgtgattttatcaaattatta 15902830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 26033476 - 26033525
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    |||||||||| |||||| ||||||||||||||||||||| | ||||||||    
T  26033476 taattacactgaattatgtgattttttcaaattattagctgcgtcagtgt 26033525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 29787383 - 29787428
Alignment:
Q  152 ataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||| |||||| ||||||| |||||||||||||||||||    
T  29787383 ataattacactgaattatgtgattttctcaaattattagcggtgtc 29787428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 197
Target Start/End: Original strand, 32287441 - 32287522
Alignment:
Q  116 ggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||| |||  ||||||| | ||||| ||||| || |||| |||||| ||||||| ||| |||||||||||||||    
T  32287441 ggtgtcggacacttgtcatgtccgacaccgacacatatacttgcactgaattatgtgattttctcagattattagcggtgtc 32287522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 5548728 - 5548676
Alignment:
Q  145 gacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||| ||||||||||||| |||||| ||||||| ||||||||| |||||||||    
T  5548728 gacacatataattacactgaattatttgattttctcaaattatcagcggtgtc 5548676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 9408349 - 9408385
Alignment:
Q  153 taattacactaaattatatgattttttcaaattatta 189  Q
    ||||||||||||||||| |||||||||||||||||||    
T  9408349 taattacactaaattatgtgattttttcaaattatta 9408385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 24339686 - 24339642
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||| |||||| ||||||||||||||||||||| |||||    
T  24339686 taattacactgaattatgtgattttttcaaattattagctgtgtc 24339642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 25481946 - 25481902
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||| |||||| ||||||||||||||||||||| |||||    
T  25481946 taattacactgaattatgtgattttttcaaattattagctgtgtc 25481902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 32308172 - 32308120
Alignment:
Q  145 gacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||| ||| ||||||||| |||||| ||||||| |||||||||||||||||||    
T  32308172 gacacatacaattacactgaattatgtgattttctcaaattattagcggtgtc 32308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 33384594 - 33384646
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||||||||||||||||||| |||||| ||| ||||||| ||||||| ||||    
T  33384594 atataattacactaaattataggattttctcagattattaacggtgtcggtgt 33384646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 3520348 - 3520403
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtcag 199  Q
    ||||| ||||||||||| | |||||||||||||| |||||| |||| |||||||||    
T  3520348 cgacacatataattacattgaattatatgattttctcaaatgattatcggtgtcag 3520403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 191
Target Start/End: Original strand, 7328697 - 7328744
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagc 191  Q
    ||||| |||||||||||||||||||| | ||||| |||||||||||||    
T  7328697 cgacacatataattacactaaattatgttattttctcaaattattagc 7328744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 38143270 - 38143231
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattatta 189  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  38143270 atataattacattaaattatgtgattttttcaaattatta 38143231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 189
Target Start/End: Original strand, 46644695 - 46644738
Alignment:
Q  146 acatatataattacactaaattatatgattttttcaaattatta 189  Q
    ||||| || ||||||||||||||||| |||||||||||||||||    
T  46644695 acatagatgattacactaaattatataattttttcaaattatta 46644738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 190
Target Start/End: Complemental strand, 5956341 - 5956280
Alignment:
Q  128 gtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattag 190  Q
    |||| |||||||||||  ||| ||||||||||| |||||||| ||||||||| ||||||||||    
T  5956341 gtgtcgtgtccgatata-acacatataattacattaaattatttgatttttttaaattattag 5956280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 1433507 - 1433454
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||| |||||||||||| |||| || ||||||| ||||||||||| |||||||    
T  1433507 cgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtc 1433454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 2948736 - 2948683
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||| |||||||||||||||||||  ||||||| | ||||||| |||||||||    
T  2948736 cgacacatataattacactaaattacgtgattttctaaaattatcagcggtgtc 2948683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 6326750 - 6326705
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    ||||||||||||||||| | | |||||||||||||| |||||||||    
T  6326750 cgacatatataattacatttatttatatgatttttttaaattatta 6326705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 7058470 - 7058433
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattag 190  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  7058470 taattacactgaattacatgattttttcaaattattag 7058433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 10478723 - 10478764
Alignment:
Q  138 cgatatcgacatatataattacactaaattatatgatttttt 179  Q
    ||||||||||| ||||||||||||| |||||||| |||||||    
T  10478723 cgatatcgacacatataattacactgaattatataatttttt 10478764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 11665444 - 11665501
Alignment:
Q  142 atcgacatatataattacactaaattatatgattttttcaaattattagcggtgtcag 199  Q
    |||||||  |||||||| ||| |||||| ||||||||||||||||||||  |||||||    
T  11665444 atcgacacttataattagactgaattatgtgattttttcaaattattagttgtgtcag 11665501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 194
Target Start/End: Complemental strand, 17851483 - 17851434
Alignment:
Q  145 gacatatataattacactaaattatatgattttttcaaattattagcggt 194  Q
    |||| ||||||||||||| |||||| ||||||| | ||||||||||||||    
T  17851483 gacacatataattacactgaattatgtgattttctaaaattattagcggt 17851434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 19206103 - 19206050
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||| ||||||||| | | |||||| ||||||| |||||||||||||||||||    
T  19206103 cgacacatataattataatgaattatgtgattttctcaaattattagcggtgtc 19206050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 22868111 - 22868042
Alignment:
Q  128 gtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||  ||||  |||| ||||||||||||| |||||| ||||||| ||| |||||||| ||||||    
T  22868111 gtgttgtgtttgatactgacacatataattacactgaattatgtgattttctcatattattagtggtgtc 22868042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 2034481 - 2034441
Alignment:
Q  157 tacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||||||||| || |||||||||||| ||||||    
T  2034481 tacactaaattatatgatattctcaaattattagtggtgtc 2034441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 2424659 - 2424619
Alignment:
Q  152 ataattacactaaattatatgattttttcaaattattagcg 192  Q
    ||||||||||| |||||| ||||||| ||||||||||||||    
T  2424659 ataattacactgaattatgtgattttctcaaattattagcg 2424619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 16341543 - 16341491
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||||||||||| |||||| ||||||| ||||||||||| | ||||| ||||    
T  16341543 atataattacacttaattatgtgattttctcaaattattatcagtgtccgtgt 16341491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 18213028 - 18213072
Alignment:
Q  133 gtgtccgatatcgacatatataattacactaaattatatgatttt 177  Q
    |||||||| | ||||| |||||||||||||||||||| |||||||    
T  18213028 gtgtccgacaccgacacatataattacactaaattatgtgatttt 18213072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 20654440 - 20654476
Alignment:
Q  150 atataattacactaaattatatgattttttcaaatta 186  Q
    |||||||||| ||||||||||||||||| ||||||||    
T  20654440 atataattaccctaaattatatgattttatcaaatta 20654476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 23191940 - 23191896
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||| || ||| ||||||| |||||||||||||||||||    
T  23191940 taattacactgaaatatgtgattttctcaaattattagcggtgtc 23191896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 39138508 - 39138464
Alignment:
Q  133 gtgtccgatatcgacatatataattacactaaattatatgatttt 177  Q
    |||||||| | ||||||||||||||||||| |||||| |||||||    
T  39138508 gtgtccgacaccgacatatataattacactgaattatgtgatttt 39138464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 40287351 - 40287406
Alignment:
Q  132 tgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattatt 188  Q
    ||||||||||| |||||  | |||||||||| ||| |||||||||||||||||||||    
T  40287351 tgtgtccgataccgacacttgtaattacactgaat-atatgattttttcaaattatt 40287406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 41020543 - 41020503
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattag 190  Q
    |||||||||||||||||||| ||||||||  ||||||||||    
T  41020543 atataattacactaaattatgtgatttttgtaaattattag 41020503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 49088865 - 49088810
Alignment:
Q  144 cgacatatataattacactaaattata--tgattttttcaaattattagcggtgtc 197  Q
    ||||| ||||||||| |||||||||||  ||||||||| ||||||||| |||||||    
T  49088865 cgacacatataattatactaaattatacgtgatttttttaaattattaacggtgtc 49088810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 8e-20; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 100 - 197
Target Start/End: Original strand, 21191018 - 21191115
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||||   || |||||||||||||||||||||| | |||||  | |||||||||| |||||| ||||||||||||||||||||| |||||    
T  21191018 ggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 21191115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 102 - 202
Target Start/End: Complemental strand, 42893455 - 42893355
Alignment:
Q  102 attaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtcagtg 201  Q
    |||||||||||  ||||||||||||||||||||||| || | |||||  | ||||||||||  ||||| ||||||||||||||||||||| ||||| |||    
T  42893455 attaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgtcggtg 42893356  T
Q  202 t 202  Q
    |    
T  42893355 t 42893355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 12927706 - 12927649
Alignment:
Q  145 gacatatataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||    
T  12927706 gacatatataattacactaaattatatgattttctcaaattattagcgatgtcggtgt 12927649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 100 - 196
Target Start/End: Original strand, 21576707 - 21576803
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    |||||||||||||    ||||| ||||||||| |||||||| |||||||  | |||||||||| |||||| ||||||||||||||||||||| ||||    
T  21576707 ggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgt 21576803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 117 - 196
Target Start/End: Original strand, 30502367 - 30502446
Alignment:
Q  117 gtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    |||||||||| |||| |||||||| | ||||| ||||||||||||| |||||  ||||||| ||||||||||||||||||    
T  30502367 gtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30502446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 117 - 196
Target Start/End: Original strand, 30542710 - 30542789
Alignment:
Q  117 gtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    |||||||||| |||| |||||||| | ||||| ||||||||||||| |||||  ||||||| ||||||||||||||||||    
T  30542710 gtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30542789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 23012386 - 23012461
Alignment:
Q  116 ggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagc 191  Q
    |||||| |||| |||| |||||| | | ||||| ||||||||||| |||||||||||||||| |||||||||||||    
T  23012386 ggtgtcagacatgtgtcgtgtccaacaccgacacatataattacattaaattatatgattttctcaaattattagc 23012461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 27932330 - 27932235
Alignment:
Q  102 attaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||  ||||||| ||||||||| |||||||| | | | || | |||||||||| |||||| | ||||| |||||||||||||||||||    
T  27932330 attaggcgtgtcctggtgtccgacacgtgtcgtgtccgacaccaagatttgtaattacactgaattatgtaattttctcaaattattagcggtgtc 27932235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 100 - 187
Target Start/End: Complemental strand, 43564978 - 43564891
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattat 187  Q
    |||||||||||||   || ||||||||| ||| |||||||| | |||||  ||||||||||||||||||| |||||||| ||||||||    
T  43564978 ggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacactaaattatgtgatttttccaaattat 43564891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 197
Target Start/End: Original strand, 16304388 - 16304483
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||| ||||| | |||||||| ||||||| ||||||||||  |||| | |  |||||||||||||||||||||| ||||||| || |||||||||    
T  16304388 ggattagacgtgtctcggtgtcgggcacgtgtcgtgtccgatactgacacaca--attacactaaattatatgatttattcaaataatcagcggtgtc 16304483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 34879414 - 34879352
Alignment:
Q  133 gtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtg 195  Q
    |||||||| ||||||| |||| |||||||| |||||||||||||| ||||||| |||||||||    
T  34879414 gtgtccgacatcgacacatattattacactgaattatatgattttctcaaatttttagcggtg 34879352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 197
Target Start/End: Original strand, 28588636 - 28588733
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||| ||||||  ||||||| || | |||| |||||||| | |||||  |||||||||||| |||||| ||||||| ||||||||||| |||||||    
T  28588636 ggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtc 28588733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 199
Target Start/End: Original strand, 32630715 - 32630796
Alignment:
Q  118 tgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtcag 199  Q
    |||||||||||||| || ||||| |  |||| ||||||||||| | |||||||| ||||| ||||||||||| |||||||||    
T  32630715 tgtcggacacgtgtcgtatccgacactgacacatataattacattgaattatataattttctcaaattattatcggtgtcag 32630796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 6471901 - 6471953
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||||||||||| |||||| ||||||| ||||||||||||| ||||||||||    
T  6471901 atataattacactgaattatgtgattttctcaaattattagccgtgtcagtgt 6471953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 14674313 - 14674269
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||    
T  14674313 taattacactaaattatgtgattttttcaaattattagctgtgtc 14674269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 27144515 - 27144463
Alignment:
Q  145 gacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||| |||||||||||||||||||| ||||||  |||||||||||||||||||    
T  27144515 gacacatataattacactaaattatgtgatttcctcaaattattagcggtgtc 27144463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 36838596 - 36838544
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    ||||| |||||||||||||||||||| | ||||| ||||||||||||||||||    
T  36838596 cgacacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 16203791 - 16203854
Alignment:
Q  134 tgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||| | ||||| ||||||||||||||||||||  |||||| ||||||||||||| |||||    
T  16203791 tgtccgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtc 16203854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 100 - 194
Target Start/End: Complemental strand, 26312866 - 26312772
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggt 194  Q
    |||||||| ||||  ||||||| ||||||| | |||||||| | ||| | ||||||||||||| |||||  ||||||| |||||||||| |||||    
T  26312866 ggattaggtgtgtcctggtgtcagacacgtatcgtgtccgacaccgatacatataattacactgaattaattgattttctcaaattatttgcggt 26312772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 153 - 199
Target Start/End: Complemental strand, 39698585 - 39698539
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtcag 199  Q
    |||||||||| |||||| ||||||||||||||||||||| |||||||    
T  39698585 taattacactgaattatgtgattttttcaaattattagctgtgtcag 39698539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 3966556 - 3966503
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||| ||||||||||||| |||| | ||||||| |||||||||||||||||||    
T  3966556 cgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtc 3966503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 11685992 - 11685939
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||| ||||||||||||||||||||  || ||| |||||||||||||||||||    
T  11685992 cgacacatataattacactaaattatgcgactttctcaaattattagcggtgtc 11685939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 15405070 - 15405119
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    |||||||| | |||||||||||||||||||||||||||  ||||||||||    
T  15405070 taattacattgaattatatgattttttcaaattattagttgtgtcagtgt 15405119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 23221036 - 23220983
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||| |||| || |||||||||||| ||||||| |||||||||||||||||||    
T  23221036 cgacacatatgataacactaaattatgtgattttatcaaattattagcggtgtc 23220983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 17593730 - 17593778
Alignment:
Q  146 acatatataattacactaaattatatgattttttcaaattattagcggt 194  Q
    ||||||||||||||||| |||||  ||||||| ||||||||||||||||    
T  17593730 acatatataattacactgaattacgtgattttctcaaattattagcggt 17593778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 35017084 - 35017044
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattag 190  Q
    |||||||||||||||||||| ||||||| ||||||||||||    
T  35017084 atataattacactaaattatgtgattttctcaaattattag 35017044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 41091261 - 41091321
Alignment:
Q  142 atcgacatatataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||||| ||||||||||||| |||||| ||||||| |||||| |||||| ||||| ||||    
T  41091261 atcgacacatataattacactgaattatgtgattttctcaaatcattagcagtgtccgtgt 41091321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 187
Target Start/End: Complemental strand, 10022681 - 10022642
Alignment:
Q  148 atatataattacactaaattatatgattttttcaaattat 187  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  10022681 atatataattacactgaattatatgattttatcaaattat 10022642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 117 - 196
Target Start/End: Complemental strand, 17123128 - 17123049
Alignment:
Q  117 gtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    |||||||||| || | |||||| | | ||||||||||||||  |||  ||||| ||||||| ||||||||||||||||||    
T  17123128 gtgtcggacatgtttcgtgtccaacaccgacatatataattgtacttgattatgtgattttctcaaattattagcggtgt 17123049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 189
Target Start/End: Original strand, 33035813 - 33035852
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattatta 189  Q
    ||||||||||||| ||||||||||||| ||||||||||||    
T  33035813 atataattacactgaattatatgatttattcaaattatta 33035852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 39205927 - 39205880
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||  |||||||||||||| ||||||||||||| |||||    
T  39205927 atataattacacctaattatatgattttctcaaattattagcagtgtc 39205880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 197
Target Start/End: Complemental strand, 22013460 - 22013414
Alignment:
Q  151 tataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||||||||| | |||||| |||||||||||| |||||    
T  22013460 tataattacactaaattatgtaatttttccaaattattagctgtgtc 22013414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 33178090 - 33178032
Alignment:
Q  132 tgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattag 190  Q
    ||||||||| | |||||  | ||||||||||||||||| ||||||||| ||||||||||    
T  33178090 tgtgtccgacaccgacacttgtaattacactaaattatgtgatttttttaaattattag 33178032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 6035535 - 6035483
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||| ||||||||||||| |||||||| | ||| |||||||||||||||||||    
T  6035535 cgacaaatataattacactgaattatatta-tttctcaaattattagcggtgtc 6035483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 6247666 - 6247629
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattag 190  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  6247666 taattacactgaattatgtgattttttcaaattattag 6247629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 116 - 197
Target Start/End: Original strand, 18421819 - 18421900
Alignment:
Q  116 ggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||| |||||| |||| ||||||||   ||||| |||||||||||||  ||||| ||||||| ||||||||| ||| |||||    
T  18421819 ggtgccggacatgtgtcgtgtccgacgccgacacatataattacactggattatgtgattttctcaaattatcagcagtgtc 18421900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 117 - 197
Target Start/End: Complemental strand, 31084408 - 31084323
Alignment:
Q  117 gtgtcggacacgtgttgtgtccgata-----tcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||||| |||||||| |     ||||||  | |||||||| | |||||| ||||||||||||||||||||| |||||    
T  31084408 gtgtcggacacgtgtcgtgtccgacacgacatcgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtc 31084323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 31682080 - 31682040
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagc 191  Q
    |||||||||||||||||||||||||||| || ||||||||||    
T  31682080 atataattacactaaattatatgattttctc-aattattagc 31682040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 4344784 - 4344740
Alignment:
Q  155 attacactaaattatatgattttttcaaattattagcggtgtcag 199  Q
    |||||||| |||||| | ||||||||||||||||| |||||||||    
T  4344784 attacactgaattatgtcattttttcaaattattatcggtgtcag 4344740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 190
Target Start/End: Original strand, 5894857 - 5894885
Alignment:
Q  162 taaattatatgattttttcaaattattag 190  Q
    |||||||||||||||||||||||||||||    
T  5894857 taaattatatgattttttcaaattattag 5894885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 7677749 - 7677705
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||| |||| |||||| ||||||||||||||||||||| |||||    
T  7677749 taattgcactgaattatgtgattttttcaaattattagctgtgtc 7677705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 19579745 - 19579701
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||| ||||||||||| ||||||| ||||||||||||| |||||    
T  19579745 taattgcactaaattatgtgattttctcaaattattagctgtgtc 19579701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 24273042 - 24273094
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||||||||||| |||||| ||||||| |||||||| || | ||||||||||    
T  24273042 atataattacactgaattatgtgattttctcaaattaataactgtgtcagtgt 24273094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 24389172 - 24389120
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||||||||||| |||||| ||||||| |||||||| || | ||||||||||    
T  24389172 atataattacactgaattatgtgattttctcaaattaataactgtgtcagtgt 24389120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 30098385 - 30098329
Alignment:
Q  138 cgatatcgacatatataattacactaaattatatgattttttcaaattattagcggt 194  Q
    ||||| |||||| |||||||||| | |||||| ||||||| ||||||||||| ||||    
T  30098385 cgataccgacatctataattacattgaattatgtgattttctcaaattattaacggt 30098329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 40131667 - 40131615
Alignment:
Q  151 tataattacactaaattatatgattttttcaaattattagcggtgtcagtgta 203  Q
    |||||||| ||| |||||| ||||||||||||||||||||  || ||||||||    
T  40131667 tataattaaactgaattatgtgattttttcaaattattagttgtatcagtgta 40131615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 43001844 - 43001800
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||| |||||| | ||||||||||||||||||| |||||    
T  43001844 taattacactgaattatgtaattttttcaaattattagcagtgtc 43001800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 3e-19; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 8423681 - 8423777
Alignment:
Q  101 gattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||   |||||||||||  ||| |||||||| | |||||| |||||||||||| |||||| ||||||| |||||||||||||||||||    
T  8423681 gattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacatttataattacactgaattatgtgattttctcaaattattagcggtgtc 8423777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 197
Target Start/End: Original strand, 23292948 - 23293045
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||||   |||||||||||||||| |||||||| | |||||  | |||||| ||| |||||| ||||||||||||||||||||| |||||    
T  23292948 ggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtc 23293045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 197
Target Start/End: Complemental strand, 40006100 - 40006003
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||| | ||| ||||||| |||| |||| |||||||||||||||||||||||  ||||||| ||||| | ||| |||||||| ||||||    
T  40006100 ggattaggcgtgtctcggtatcggacatgtgtcgtgttcgatatcgacatatataattacataaaattatgtgattatatcagattattagtggtgtc 40006003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 15724482 - 15724545
Alignment:
Q  77 actatgaagcacataaaataattggattaggcgtgttttggtgtcggacacgtgttgtgtccga 140  Q
    ||||||||||||||||| |  | |||||||||||||||||||||| ||||||||||||||||||    
T  15724482 actatgaagcacataaactcctcggattaggcgtgttttggtgtctgacacgtgttgtgtccga 15724545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 100 - 198
Target Start/End: Original strand, 40179598 - 40179696
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtca 198  Q
    |||||||||||||  |||||||| ||| |||| |||||||| | ||||  ||||||||||||| |||||| ||||||||||||| |||||  |||||||    
T  40179598 ggattaggcgtgtcatggtgtcgaacatgtgtcgtgtccgacaccgacgcatataattacactgaattatgtgattttttcaaactattaatggtgtca 40179696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 199
Target Start/End: Original strand, 54580006 - 54580084
Alignment:
Q  121 cggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtcag 199  Q
    ||||||||||| |||||||| | |||||  |||||||||||| |||||| ||||||||||||||||||||  |||||||    
T  54580006 cggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgtcag 54580084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 2361938 - 2362039
Alignment:
Q  101 gattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtcagt 200  Q
    ||||||| |||| | |||||| |||||| || |||||||| | |||||  | ||||||||||||||||| | ||||||||||||||||||| ||||| ||    
T  2361938 gattaggtgtgtctcggtgtcagacacgagtcgtgtccgacaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgtcggt 2362037  T
Q  201 gt 202  Q
    ||    
T  2362038 gt 2362039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 100 - 197
Target Start/End: Complemental strand, 21945600 - 21945503
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||||  ||||||||||| ||||  ||||||| | |||||  | |||||||||| |||||| | ||||||||||||||||||| |||||    
T  21945600 ggattaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtc 21945503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 101 - 190
Target Start/End: Original strand, 34306767 - 34306855
Alignment:
Q  101 gattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattag 190  Q
    |||||||||||| | |||||||||||||||| |||||||| | |||||  | ||||||||||| ||||| ||| ||||||||||||||||    
T  34306767 gattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactacattatctga-tttttcaaattattag 34306855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 38846975 - 38847071
Alignment:
Q  101 gattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||  |||| ||||||||||||||||| || ||||| |  ||||  | |||||||||| ||| |||||||||||||||||||||||| |||||    
T  38846975 gattaggtatgttctggtgtcggacacgtgtcgtatccgacactgacacttgtaattacactgaataatatgattttttcaaattattagctgtgtc 38847071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 999353 - 999407
Alignment:
Q  143 tcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||| |||||||||||||||||||||||||||  |||||||||||||| ||||    
T  999353 tcgacacatataattacactaaattatatgatttactcaaattattagcgatgtc 999407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 190
Target Start/End: Original strand, 35157947 - 35158037
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattag 190  Q
    |||||| |||||||  ||||| ||||| |||| ||||| || | |||||  ||||||||||||||||||| |||||||| |||||||||||    
T  35157947 ggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacacttataattacactaaattatgtgatttttccaaattattag 35158037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 189
Target Start/End: Original strand, 12895236 - 12895325
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    |||||||||||||   | ||||||| || ||| |||||||| | |||||  ||||||||||| ||||||| |||||||||||||||||||    
T  12895236 ggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacacttataattacacaaaattatgtgattttttcaaattatta 12895325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 31800441 - 31800542
Alignment:
Q  101 gattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtcagt 200  Q
    ||||| ||||||||||||||| ||||  ||| |||| ||||| |||||  | |||||||| |||||||| | ||||||| ||||||||||| ||||| ||    
T  31800441 gattatgcgtgttttggtgtcagacatctgtcgtgtacgataccgacacttgtaattacattaaattatttaattttttaaaattattagctgtgtcggt 31800540  T
Q  201 gt 202  Q
    ||    
T  31800541 gt 31800542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 196
Target Start/End: Complemental strand, 29205525 - 29205445
Alignment:
Q  116 ggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    ||||||||||| |||| |||||| | | |||||  | |||||||||| |||||| ||||||||||||||||||||| ||||    
T  29205525 ggtgtcggacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtgattttttcaaattattagccgtgt 29205445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 189
Target Start/End: Original strand, 44081584 - 44081628
Alignment:
Q  145 gacatatataattacactaaattatatgattttttcaaattatta 189  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||    
T  44081584 gacacatataattacattaaattatatgattttttcaaattatta 44081628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 11931335 - 11931280
Alignment:
Q  142 atcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||| ||||| |||||||||||||| ||||||||||| ||||||| |||||||    
T  11931335 atcgacacatatatttacactaaattatgtgattttttcatattattaacggtgtc 11931280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 21720513 - 21720568
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtcag 199  Q
    ||||||||||| ||||| |||||||||||||||| |||||||||||  ||||||||    
T  21720513 cgacatatatagttacattaaattatatgattttatcaaattattaagggtgtcag 21720568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 40742646 - 40742599
Alignment:
Q  142 atcgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    ||||||| |||||||||||||| ||||||||||||| |||||||||||    
T  40742646 atcgacacatataattacactagattatatgattttctcaaattatta 40742599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 116 - 202
Target Start/End: Complemental strand, 4157230 - 4157145
Alignment:
Q  116 ggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||||||||| |||| |||||||| | |||||  | ||||| ||||||||||| ||| ||||||||||||||||  ||||||||||    
T  4157230 ggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtga-tttttcaaattattagttgtgtcagtgt 4157145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 147 - 189
Target Start/End: Original strand, 18491888 - 18491930
Alignment:
Q  147 catatataattacactaaattatatgattttttcaaattatta 189  Q
    |||||||||||||| |||||||||||||||||| |||||||||    
T  18491888 catatataattacattaaattatatgatttttttaaattatta 18491930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 116 - 197
Target Start/End: Complemental strand, 49431107 - 49431025
Alignment:
Q  116 ggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgatttttt-caaattattagcggtgtc 197  Q
    ||||| |||||||||| |||||||| | |||||  | |||||||||| |||||| ||||||||| |||||||||||| |||||    
T  49431107 ggtgttggacacgtgtcgtgtccgacaccgacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtc 49431025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 21539877 - 21539918
Alignment:
Q  148 atatataattacactaaattatatgattttttcaaattatta 189  Q
    |||||||||||||||||||||||||||||| | |||||||||    
T  21539877 atatataattacactaaattatatgattttcttaaattatta 21539918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 37203308 - 37203259
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||| ||||    
T  37203308 taattacactaaattatgtcattttttcaaattattagccgtgtctgtgt 37203259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 37698762 - 37698709
Alignment:
Q  147 catatataattacactaaattatatgattttttcaaattattagcggtgtcagt 200  Q
    |||||||||||||||| |||||||| ||||| |||||||||||| | |||||||    
T  37698762 catatataattacactgaattatataattttctcaaattattagagatgtcagt 37698709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 40613503 - 40613450
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||| ||||||||||||| |||||| ||||||| ||||| |||||||||||||    
T  40613503 cgacacatataattacactgaattatgtgattttctcaaaatattagcggtgtc 40613450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 56257978 - 56257933
Alignment:
Q  152 ataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||| |||||||||||||| ||||||||||||| |||||    
T  56257978 ataattacactgaattatatgattttctcaaattattagcagtgtc 56257933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 3712516 - 3712568
Alignment:
Q  145 gacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||| ||||||||||| | ||||| |||||||| |||||||||||||||||||    
T  3712516 gacacatataattacattgaattacatgattttctcaaattattagcggtgtc 3712568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 6485626 - 6485662
Alignment:
Q  153 taattacactaaattatatgattttttcaaattatta 189  Q
    ||||||||||||||||| |||||||||||||||||||    
T  6485626 taattacactaaattatgtgattttttcaaattatta 6485662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 30838256 - 30838216
Alignment:
Q  151 tataattacactaaattatatgattttttcaaattattagc 191  Q
    ||||||||||||||||||||| ||||| |||||||||||||    
T  30838256 tataattacactaaattatataattttatcaaattattagc 30838216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 9996920 - 9996849
Alignment:
Q  117 gtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattatt 188  Q
    |||||||||||||||| |||| || | ||| | ||||||||| ||| |||||| ||||||| ||||||||||    
T  9996920 gtgtcggacacgtgttatgtctgacaccgagacatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 13134505 - 13134450
Alignment:
Q  142 atcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||| |||||||||||||||||||| ||||||| | ||||||| ||| |||||    
T  13134505 atcgacacatataattacactaaattatgtgattttcttaaattataagcagtgtc 13134450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 15029812 - 15029765
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||| |||||| |||| |||||||||||||||| |||||    
T  15029812 atataattacactgaattatgtgatattttcaaattattagcagtgtc 15029765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 22440612 - 22440659
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||| |||||| ||||||| ||||||||||| |||||||    
T  22440612 atataattacactgaattatgtgattttctcaaattattaacggtgtc 22440659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 191
Target Start/End: Original strand, 28964210 - 28964301
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagc 191  Q
    |||||||||||||    |||||||| | |||| |||||||| |  ||||  | |||||||||| |||||| |||||||||||||||||||||    
T  28964210 ggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatgtgattttttcaaattattagc 28964301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 38148729 - 38148784
Alignment:
Q  142 atcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||| || ||||||||| |||||| ||||||| ||||| |||||||||||||    
T  38148729 atcgacatttaaaattacactgaattatgtgattttctcaaactattagcggtgtc 38148784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 196
Target Start/End: Complemental strand, 6863200 - 6863154
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    |||||||| |||  |||||||||||||||||||||||||| ||||||    
T  6863200 atataattgcaccgaattatatgattttttcaaattattaacggtgt 6863154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 7214534 - 7214580
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    ||||||||||| |||||||| ||||||| |||||||||||| |||||    
T  7214534 atataattacattaaattatgtgattttctcaaattattagtggtgt 7214580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 11596367 - 11596405
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagc 191  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  11596367 taattacactgaattatgtgattttttcaaattattagc 11596405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 30522923 - 30522973
Alignment:
Q  146 acatatataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    ||||||||| ||||||| |||||| ||||||| |||||| |||||||||||    
T  30522923 acatatatagttacactgaattatgtgattttctcaaataattagcggtgt 30522973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 196
Target Start/End: Complemental strand, 36635371 - 36635325
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    ||||||||||||| |||||| ||||||| |||||||||||| |||||    
T  36635371 atataattacactgaattatgtgattttctcaaattattagtggtgt 36635325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 903969 - 903924
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtg 195  Q
    ||||||||||||| |||||| ||||||| ||||||||||| |||||    
T  903969 atataattacactgaattatgtgattttctcaaattattaacggtg 903924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 189
Target Start/End: Original strand, 5775364 - 5775409
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    ||||| ||||||||||||| |||||| ||||||| |||||||||||    
T  5775364 cgacacatataattacacttaattatgtgattttctcaaattatta 5775409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 6273990 - 6273953
Alignment:
Q  151 tataattacactaaattatatgattttttcaaattatt 188  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  6273990 tataattacactaaattatatcattttctcaaattatt 6273953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 189
Target Start/End: Complemental strand, 16073491 - 16073403
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    ||||||||||||| || |||||||||| || | |||||||| | |||||  | |||||||||| ||||||  || |||||||||||||||    
T  16073491 ggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgcga-tttttcaaattatta 16073403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 33950189 - 33950140
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcgg 193  Q
    ||||| |||| |||||| |||||||| ||||||| |||||||||||||||    
T  33950189 cgacacatatgattacattaaattatgtgattttctcaaattattagcgg 33950140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 35952629 - 35952670
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagc 191  Q
    ||||||||||| | |||||||||||||| |||||||||||||    
T  35952629 atataattacattgaattatatgattttatcaaattattagc 35952670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 48139349 - 48139272
Alignment:
Q  112 ttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    ||||||||||| ||| |||| ||||| || ||| ||| ||||||||||| ||||||||  |||| | |||||||||||    
T  48139349 ttttggtgtcgaacatgtgtcgtgtctgacatcaacacatataattacattaaattatgagattatctcaaattatta 48139272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 51701302 - 51701253
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    |||||||||| |||||| | ||||||||||||||||||| ||||| ||||    
T  51701302 taattacactcaattatgtaattttttcaaattattagctgtgtccgtgt 51701253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 56488517 - 56488570
Alignment:
Q  145 gacatatataattacactaaattatatgattttttcaaattattagcggtgtca 198  Q
    |||| |||| ||||| || |||||||||||||| ||||||| ||||||||||||    
T  56488517 gacacatatgattaccctgaattatatgattttctcaaattgttagcggtgtca 56488570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 1213225 - 1213280
Alignment:
Q  142 atcgacatatataattacactaaattatatgattttttcaaattattagcggtgtca 198  Q
    ||||||| ||||||||||||| |||||||| ||||||| ||||||||| | ||||||    
T  1213225 atcgacacatataattacactgaattatataatttttt-aaattattaacagtgtca 1213280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 3947781 - 3947825
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||| ||||||  |||||||||||||||||||| |||||    
T  3947781 taattacactgaattatgcgattttttcaaattattagctgtgtc 3947825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 178
Target Start/End: Complemental strand, 4157531 - 4157455
Alignment:
Q  102 attaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttt 178  Q
    ||||||||| | | ||||||||||| |||| |||||||| | |||||  | ||||| ||||||||||| ||||||||    
T  4157531 attaggcgtttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgattttt 4157455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 16189754 - 16189710
Alignment:
Q  152 ataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    ||||||||||| |||||| ||||||| ||||||| ||||||||||    
T  16189754 ataattacactgaattatgtgattttctcaaatttttagcggtgt 16189710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 16303281 - 16303317
Alignment:
Q  153 taattacactaaattatatgattttttcaaattatta 189  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  16303281 taattacactaaattatatcattttttcaaaatatta 16303317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 23861439 - 23861495
Alignment:
Q  146 acatatataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||||||||||||| | ||| || ||||||| |||| |||||||||||||| ||||    
T  23861439 acatatataattacattgaatcatgtgattttatcaatttattagcggtgtcggtgt 23861495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 27706192 - 27706228
Alignment:
Q  153 taattacactaaattatatgattttttcaaattatta 189  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  27706192 taattacactaaattatgtgatttttttaaattatta 27706228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 189
Target Start/End: Complemental strand, 70375 - 70286
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    ||||||||| |||  ||||||||||||||||| |||||||| | |||||  |||||||||||| |||||| | |||||||||||||||||    
T  70375 ggattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgttattttttcaaattatta 70286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 34897150 - 34897085
Alignment:
Q  132 tgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||| ||||||| ||||||||||||| |||||| ||||||| |||||||||||||||||||    
T  34897150 tgtgtccgacatcgacacatataattacactgaattatgtgattttctcaaattattagcggtgtc 34897085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 102 - 190
Target Start/End: Complemental strand, 14134794 - 14134706
Alignment:
Q  102 attaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattag 190  Q
    |||||||||||  ||||| ||||||||||| ||||  || | ||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  14134794 attaggcgtgtcctggtgacggacacgtgtcgtgtttgacaccgacatatataattacactgaattatgtgattttctcaaattattag 14134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 33405343 - 33405435
Alignment:
Q  97 attggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    |||||||||| |||||   |||||| |||| |||| |||||||| | ||||| |||||||||||||||||||| || |||| |||||||||||    
T  33405343 attggattagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgacacatataattacactaaattatgtgtttttctcaaattatta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 5813687 - 5813592
Alignment:
Q  102 attaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||   |||||||||||||||| |||||||| | |||||  | || |||||||||| ||| ||| ||||||||||||||||| |||||    
T  5813687 attaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagctgtgtc 5813592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 39954291 - 39954338
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||    
T  39954291 atataattacactaaattatgtgattttctcaaattattagcggtgtc 39954338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 190
Target Start/End: Original strand, 36450716 - 36450806
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattag 190  Q
    |||||||||||||  |||||||||||||| || |||||||| | | |||  | |||||||||| |||| | ||||||||||||||||||||    
T  36450716 ggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaattctgtgattttttcaaattattag 36450806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 197
Target Start/End: Original strand, 20679373 - 20679454
Alignment:
Q  116 ggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||||||||| ||| || | |||||  |||||||||||| || ||| ||||||| |||||||||||| ||||||    
T  20679373 ggtgtcggacacgtgttgcgtctgacaccgacacttataattacactgaactatgtgattttctcaaattattaggggtgtc 20679454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 20873146 - 20873077
Alignment:
Q  120 tcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    |||||||||| | |||||||| | |||||  | ||||||||||||||||| |||||||||||||||||||    
T  20873146 tcggacacgtatcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 20873077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 25566885 - 25566836
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    |||||||||| |||||| ||||||||||||||||||||| ||||||||||    
T  25566885 taattacactgaattatgtgattttttcaaattattagctgtgtcagtgt 25566836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 189
Target Start/End: Original strand, 31580089 - 31580178
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    |||||||| |||||| ||||||| ||| |||| | |||||| |||||||  |||||||||||| |||||| ||||||| | |||||||||    
T  31580089 ggattaggtgtgtttcggtgtcgaacatgtgtcgcgtccgacatcgacacctataattacactcaattatgtgattttcttaaattatta 31580178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 197
Target Start/End: Original strand, 13844591 - 13844655
Alignment:
Q  133 gtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||| | ||||| ||||||||||||| |||||| ||||||| ||||||||||||| |||||    
T  13844591 gtgtccgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtc 13844655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 14731759 - 14731707
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    |||||||||||||||||||| ||||||| ||||||||||||| ||||| ||||    
T  14731759 atataattacactaaattatgtgattttctcaaattattagcagtgtctgtgt 14731707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 15816142 - 15816181
Alignment:
Q  151 tataattacactaaattatatgattttttcaaattattag 190  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  15816142 tataattacactaaattatgtgattttttcaaattattag 15816181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 3025631 - 3025557
Alignment:
Q  117 gtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagc 191  Q
    ||||| ||||||||| |||||||| |  ||||  |||||||||||| |||||| ||||||| |||||||||||||    
T  3025631 gtgtcagacacgtgtcgtgtccgacactgacacctataattacactgaattatgtgattttctcaaattattagc 3025557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 8343016 - 8342978
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagc 191  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  8343016 taattacactaaattatgtgattttttcaaattattagc 8342978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 8343360 - 8343322
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagc 191  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  8343360 taattacactaaattatgtgattttttcaaattattagc 8343322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 27101553 - 27101515
Alignment:
Q  159 cactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  27101553 cactaaattatgtgattttttcaaattattagcggtgtc 27101515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 2572071 - 2572108
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattag 190  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  2572071 taattacactaaattatgtgattttttcaaattattag 2572108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 189
Target Start/End: Complemental strand, 3677883 - 3677794
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    ||||||||||||| || |||||| || |||||||||||| | | ||| | |||||||||||   |||||| ||||||||| |||||||||    
T  3677883 ggattaggcgtgtcttcgtgtcgaactcgtgttgtgtccaacaccgatacatataattacatagaattatgtgattttttaaaattatta 3677794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 12606835 - 12606888
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||| ||||||||||| | |||||||||||||| ||||||||||||| |||||    
T  12606835 cgacacatataattacattgaattatatgattttctcaaattattagcagtgtc 12606888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 4611581 - 4611529
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||||||||||| |||||| | ||||| ||||||||||||||||||| ||||    
T  4611581 atataattacactgaattatgttattttctcaaattattagcggtgtcggtgt 4611529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 24362209 - 24362261
Alignment:
Q  145 gacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||| ||||||||||||| |||||| ||||| | |||||||||||||||||||    
T  24362209 gacacatataattacactgaattatgtgattctctcaaattattagcggtgtc 24362261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 18407814 - 18407719
Alignment:
Q  102 attaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||  | |||||||||| |||| |||||||  | |||||  | |||||||||| |||||| |||||||||  |||||||||| |||||    
T  18407814 attaggcgtgtcctagtgtcggacatgtgtcgtgtccggcagcgacacttgtaattacactgaattatgtgatttttttgaattattagctgtgtc 18407719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 20785472 - 20785523
Alignment:
Q  145 gacatatataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    |||| ||||||||||| |||||||| ||||||  ||||||||||||||||||    
T  20785472 gacacatataattacattaaattatgtgatttcctcaaattattagcggtgt 20785523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 196
Target Start/End: Original strand, 22197757 - 22197800
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    ||||||||||||||||| ||| ||||||||||||||||| ||||    
T  22197757 taattacactaaattatgtgaatttttcaaattattagctgtgt 22197800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 31557095 - 31557005
Alignment:
Q  98 ttggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    |||||||||||||||  |||||||||||| |||| ||||| || | ||| |  | |||||||||| |||||| ||| |||||||||||||||    
T  31557095 ttggattaggcgtgtcctggtgtcggacatgtgtcgtgtctgacaccgaaacttgtaattacactgaattatgtga-tttttcaaattatta 31557005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 36934717 - 36934670
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||||    
T  36934717 atataattacaatgaattatgtgattttttcgaattattagcggtgtc 36934670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 21465445 - 21465407
Alignment:
Q  164 aattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  21465445 aattatatgattttttcaaattattagctgtgtccgtgt 21465407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 4948696 - 4948659
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattag 190  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  4948696 taattacactgaattatgtgattttttcaaattattag 4948659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 7658516 - 7658463
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||| ||||||||||||| |||||| | ||||| |||||||||||| ||||||    
T  7658516 cgacaaatataattacactgaattatgtaattttctcaaattattagtggtgtc 7658463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 11803306 - 11803253
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtcagtgta 203  Q
    ||||||||||||| |||||| ||||||| | ||||||||| | |||||||||||    
T  11803306 atataattacactgaattatgtgattttcttaaattattaacagtgtcagtgta 11803253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 189
Target Start/End: Original strand, 11927092 - 11927137
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    ||||| ||||||||||||| |||||| ||||||| |||||||||||    
T  11927092 cgacacatataattacactgaattatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 12985457 - 12985400
Alignment:
Q  132 tgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    ||||||||| | |||||||||| |||||| | |||||| ||||||| |||||||||||    
T  12985457 tgtgtccgacaccgacatatatgattacattgaattatgtgattttctcaaattatta 12985400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 31236583 - 31236636
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||| ||||||||||| | |||||| ||||||| ||||||||||||| |||||    
T  31236583 cgacacatataattacattgaattatgtgattttctcaaattattagcagtgtc 31236636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 4298901 - 4298937
Alignment:
Q  153 taattacactaaattatatgattttttcaaattatta 189  Q
    |||||||| |||||||| |||||||||||||||||||    
T  4298901 taattacattaaattatgtgattttttcaaattatta 4298937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 4673440 - 4673476
Alignment:
Q  153 taattacactaaattatatgattttttcaaattatta 189  Q
    |||||||||| |||| |||||||||||||||||||||    
T  4673440 taattacactgaattttatgattttttcaaattatta 4673476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 7472522 - 7472574
Alignment:
Q  145 gacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||| ||||||||||||||| |||| |||||| || |||||||||| ||||||    
T  7472522 gacacatataattacactaatttatgtgatttctttaaattattagtggtgtc 7472574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 12570512 - 12570568
Alignment:
Q  142 atcgacatatataattacactaaattatatgattttttcaaattattagcggtgtca 198  Q
    ||||||| ||||||||||||| |||||| || |||| | ||||||||||| ||||||    
T  12570512 atcgacacatataattacacttaattatgtgtttttcttaaattattagcagtgtca 12570568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 12570742 - 12570794
Alignment:
Q  146 acatatataattacactaaattatatgattttttcaaattattagcggtgtca 198  Q
    ||||||||||||||||| ||||||  | |||| | ||||||||||||||||||    
T  12570742 acatatataattacacttaattatgcgtttttcttaaattattagcggtgtca 12570794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 13018328 - 13018284
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggt 194  Q
    |||| ||||||||||||||| ||||||| ||||||||||| ||||    
T  13018328 atatcattacactaaattatgtgattttgtcaaattattaacggt 13018284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 18067954 - 18067994
Alignment:
Q  158 acactaaattatatgattttttcaaattattagcggtgtca 198  Q
    ||||| |||||| ||||||| ||||||||||||||||||||    
T  18067954 acactgaattatgtgattttctcaaattattagcggtgtca 18067994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 34223000 - 34222952
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcg 192  Q
    ||||| ||||||||||||| |||||| ||||||| | ||||||||||||    
T  34223000 cgacacatataattacacttaattatgtgattttattaaattattagcg 34222952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 8e-17; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 117 - 197
Target Start/End: Original strand, 37411223 - 37411303
Alignment:
Q  117 gtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||| || |||| ||| ||||||| ||||||| ||||| |||||| ||||||| |||||||||||||||||||    
T  37411223 gtgtcggacacgcgtcgtgttcgacatcgacacatataatcacactgaattatgtgattttctcaaattattagcggtgtc 37411303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 100 - 199
Target Start/End: Original strand, 2438681 - 2438780
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtcag 199  Q
    |||||||||||||   ||||||||||| |||| |||||||| | |||||  | |||||||||| |||||| ||||||||| ||||||||||| |||||||    
T  2438681 ggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttgaaattattagctgtgtcag 2438780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 34691800 - 34691861
Alignment:
Q  133 gtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggt 194  Q
    |||||||| | ||||| ||||||||||||| |||||||||||||| ||||||||||||||||    
T  34691800 gtgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34691861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 34714212 - 34714273
Alignment:
Q  133 gtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggt 194  Q
    |||||||| | ||||| ||||||||||||| |||||||||||||| ||||||||||||||||    
T  34714212 gtgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34714273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 100 - 197
Target Start/End: Original strand, 38117121 - 38117218
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||||   ||||||||||||||||||||||||| | | |||  | |||||||||  || ||| ||||||||||||||||||||| |||||    
T  38117121 ggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacacttgtaattacaccgaagtatgtgattttttcaaattattagctgtgtc 38117218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 20539689 - 20539733
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  20539689 taattacactaaattatatgattttttcaaattattagctgtgtc 20539733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 28677956 - 28677909
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||    
T  28677956 atataattacactgaattatgtgattttttcaaattattagcggtgtc 28677909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 30527595 - 30527646
Alignment:
Q  138 cgatatcgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    ||||| ||||| |||||||||||||||||||||||||||| |||||||||||    
T  30527595 cgataccgacacatataattacactaaattatatgattttctcaaattatta 30527646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 44860373 - 44860315
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||| ||||||||||||| ||||||  |||||| ||||||||||||||||||||||||    
T  44860373 cgacacatataattacactgaattatgcgattttctcaaattattagcggtgtcagtgt 44860315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 6940376 - 6940255
Alignment:
Q  76 gactatgaagcacataaaataattggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgatt 175  Q
    ||||| |||||||  | ||| ||| ||||||| |||| ||||||| |||||||||| ||||| |||| |||||  | |||||||||| |||||| | | |    
T  6940376 gactacgaagcacggacaatcatttgattaggtgtgtcttggtgttggacacgtgtcgtgtcggataccgacacttgtaattacacttaattatgtaact 6940277  T
Q  176 ttttcaaattattagcggtgtc 197  Q
    |||| ||||||||||| |||||    
T  6940276 ttttaaaattattagctgtgtc 6940255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 177
Target Start/End: Original strand, 20242689 - 20242766
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgatttt 177  Q
    |||| ||||||||  | ||||| |||||||||||||||||| | ||||| ||||||||||||| |||||| |||||||    
T  20242689 ggataaggcgtgtcctcgtgtcagacacgtgttgtgtccgacaccgacacatataattacactgaattatgtgatttt 20242766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 36409641 - 36409686
Alignment:
Q  152 ataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||    
T  36409641 ataattacactaaattatgtgattttttcaaattatcagcggtgtc 36409686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 4207904 - 4207852
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||||||||||||||||||  | ||||||||||||||||| |||||||||||    
T  4207904 atataattacactaaattatgcgcttttttcaaattattagtggtgtcagtgt 4207852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 190
Target Start/End: Complemental strand, 5367291 - 5367199
Alignment:
Q  98 ttggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattag 190  Q
    |||||||||||||||   || |||||| | |||| |||||||| | ||||| ||||||||||||| |||||| ||||||  ||||||||||||    
T  5367291 ttggattaggcgtgtcccggagtcggatatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttcctcaaattattag 5367199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 30404813 - 30404901
Alignment:
Q  101 gattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    |||||||| |||  |||||||||||| |||| ||||||||   |||||  | |||||||||| |||||| |||||||||||||||||||    
T  30404813 gattaggcatgtcctggtgtcggacatgtgtcgtgtccgacgccgacacttgtaattacactgaattatgtgattttttcaaattatta 30404901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 12940940 - 12940987
Alignment:
Q  143 tcgacatatataattacactaaattatatgattttttcaaattattag 190  Q
    ||||||| | |||||||||| |||||||||||||||||||||||||||    
T  12940940 tcgacatttgtaattacactgaattatatgattttttcaaattattag 12940987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 21616809 - 21616762
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||||||    
T  21616809 atataattacactgaattatgtgattttctcaaattattagcggtgtc 21616762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 22084840 - 22084890
Alignment:
Q  146 acatatataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    ||||||| ||||||||| |||||||||||||| ||||||||||| ||||||    
T  22084840 acatataaaattacactgaattatatgattttctcaaattattaacggtgt 22084890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 23718079 - 23718021
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||| ||||||||||||| |||||| ||| ||| ||||||||||||||||||| ||||    
T  23718079 cgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgt 23718021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 24105751 - 24105693
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||| ||||||||||||| |||||| ||| ||| ||||||||||||||||||| ||||    
T  24105751 cgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgt 24105693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 189
Target Start/End: Original strand, 40361739 - 40361805
Alignment:
Q  123 gacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    ||||||||| ||||| || | | ||| |||||||||||||||||||| | |||||||||||||||||    
T  40361739 gacacgtgtcgtgtctgacaccaacagatataattacactaaattatgtaattttttcaaattatta 40361805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 14996238 - 14996283
Alignment:
Q  153 taattacactaaattatatga-ttttttcaaattattagcggtgtc 197  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||    
T  14996238 taattacactaaattatatgatttttttcaaattattagctgtgtc 14996283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 16069268 - 16069313
Alignment:
Q  152 ataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||| |||||||||||||||| ||||||||| |||||||    
T  16069268 ataattacactgaattatatgatttttttaaattattaacggtgtc 16069313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 31808129 - 31808072
Alignment:
Q  145 gacatatataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    |||| ||||||||||||| |||||| ||||||| | ||||||||||||||||| ||||    
T  31808129 gacacatataattacactgaattatgtgattttgttaaattattagcggtgtcggtgt 31808072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 195
Target Start/End: Complemental strand, 6290257 - 6290159
Alignment:
Q  101 gattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacat-----atataattacactaaattatatgattttttcaaattattagcggtg 195  Q
    |||||| | ||||||||||||||| |||||  |||||||| | ||||||     ||||||||| |||||| ||||| ||||||| |||||||||||||||    
T  6290257 gattagacatgttttggtgtcggatacgtgcagtgtccgaca-cgacattgaacatataattatactaaaatatataatttttttaaattattagcggtg 6290159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 116 - 199
Target Start/End: Original strand, 18840991 - 18841074
Alignment:
Q  116 ggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtcag 199  Q
    ||||||||||| |||| ||||| || | |||||  | |||||||||| |||||| | ||||||||||||||||||  |||||||    
T  18840991 ggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatgtaattttttcaaattattagttgtgtcag 18841074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 24975337 - 24975384
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||| ||||||| ||||||| |||||| |||||||||||||||||||    
T  24975337 atatatttacactgaattatacgattttctcaaattattagcggtgtc 24975384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 31018654 - 31018591
Alignment:
Q  133 gtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    |||||||| | |||||  |||||||||||||||| || ||||||| | ||||||||||||||||    
T  31018654 gtgtccgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgt 31018591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 202
Target Start/End: Original strand, 31456654 - 31456705
Alignment:
Q  151 tataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    |||||||||||| ||||| || ||||| | ||||||||||||||||||||||    
T  31456654 tataattacactgaattacataattttcttaaattattagcggtgtcagtgt 31456705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 1328023 - 1327973
Alignment:
Q  152 ataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||||| ||| |||| ||||||||| ||||||||||||||||||| ||||    
T  1328023 ataattatactgaattttatgattttctcaaattattagcggtgtcggtgt 1327973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 2423916 - 2423874
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcg 192  Q
    ||||||||| |||||||||||||||||| ||||||| ||||||    
T  2423916 atataattatactaaattatatgattttctcaaatttttagcg 2423874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 2665900 - 2665946
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    |||||||||||||||||||| ||||||| | |||||||||| |||||    
T  2665900 atataattacactaaattatgtgattttctaaaattattagtggtgt 2665946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 189
Target Start/End: Complemental strand, 15972951 - 15972881
Alignment:
Q  119 gtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    ||||||||||||| |||||||| | |||||  | |||||||||| |||| | | |||||||||||||||||    
T  15972951 gtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattgtgtaattttttcaaattatta 15972881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 30335470 - 30335424
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattag 190  Q
    |||||| | ||||||||||||||||| | ||||||||||||||||||    
T  30335470 cgacatttgtaattacactaaattatgtcattttttcaaattattag 30335424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 30717545 - 30717583
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagc 191  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  30717545 taattacactgaattatgtgattttttcaaattattagc 30717583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 149
Target Start/End: Complemental strand, 32355508 - 32355466
Alignment:
Q  107 gcgtgttttggtgtcggacacgtgttgtgtccgatatcgacat 149  Q
    ||||||||||||||||||||| ||| |||||||||| ||||||    
T  32355508 gcgtgttttggtgtcggacacatgtcgtgtccgataccgacat 32355466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 4882711 - 4882752
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggt 194  Q
    |||||||||| |||||||| |||||||||||| |||||||||    
T  4882711 taattacactgaattatatcattttttcaaataattagcggt 4882752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 8950341 - 8950374
Alignment:
Q  164 aattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||| ||||||||||||||||||||||||||    
T  8950341 aattataagattttttcaaattattagcggtgtc 8950374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 18276566 - 18276521
Alignment:
Q  152 ataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||| |||||  ||||||| |||||||||||||||||||    
T  18276566 ataattacactgaattaagtgattttctcaaattattagcggtgtc 18276521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 19614235 - 19614178
Alignment:
Q  145 gacatatataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    |||| ||||||||||||| ||||  | ||||||| |||||||||||| ||||||||||    
T  19614235 gacacatataattacactgaatttaaagatttttccaaattattagcagtgtcagtgt 19614178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 21782832 - 21782877
Alignment:
Q  152 ataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||| |||||| ||||||| ||||||||||||| |||||    
T  21782832 ataattacactgaattatgtgattttctcaaattattagcagtgtc 21782877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 116 - 197
Target Start/End: Complemental strand, 37559058 - 37558977
Alignment:
Q  116 ggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||||||   |||||| | |||||  | |||||||| | |||||| |||||||| |||||||||||| |||||    
T  37559058 ggtgtcggacacgtgtcaagtccgacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtc 37558977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 140
Target Start/End: Original strand, 19580247 - 19580287
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccga 140  Q
    |||||||  |||||||||||| |||||||||||||||||||    
T  19580247 ggattagatgtgttttggtgttggacacgtgttgtgtccga 19580287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 21374714 - 21374758
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||| |||||| | ||||||||||||||||||| |||||    
T  21374714 taattacactgaattatgtaattttttcaaattattagctgtgtc 21374758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 193
Target Start/End: Complemental strand, 22557008 - 22556964
Alignment:
Q  150 atataattacactaaattatatgatt-ttttcaaattattagcgg 193  Q
    ||||||||||| | |||||||||||| ||||||||||||||||||    
T  22557008 atataattacattgaattatatgattattttcaaattattagcgg 22556964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 23354669 - 23354713
Alignment:
Q  155 attacactaaattatatgattttttcaaattattagcggtgtcag 199  Q
    ||||||||||||||||| ||||| ||||||||||| | |||||||    
T  23354669 attacactaaattatatcattttctcaaattattatctgtgtcag 23354713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 28412395 - 28412351
Alignment:
Q  152 ataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    ||||||||||| |||||| ||||||| ||||||||||| ||||||    
T  28412395 ataattacactgaattatgtgattttatcaaattattaacggtgt 28412351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 29970553 - 29970609
Alignment:
Q  142 atcgacatatataattacactaaattatatgattttttcaaattattagcggtgtca 198  Q
    ||||||| |||| |||||||| || |||  |||||| ||||||||||||||||||||    
T  29970553 atcgacacatatgattacactgaactatgcgattttctcaaattattagcggtgtca 29970609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 36281732 - 36281688
Alignment:
Q  150 atataattacactaaattatatgattttttcaaattattagcggt 194  Q
    |||| ||||||||||||||| ||||||| ||||||||||| ||||    
T  36281732 atatgattacactaaattatgtgattttctcaaattattaacggt 36281688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 39279728 - 39279676
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgt 196  Q
    ||||| ||||||||||||| |||||| ||||||| ||| ||||||| ||||||    
T  39279728 cgacacatataattacactgaattatttgattttctcatattattaacggtgt 39279676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 39323308 - 39323264
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||| |||||| | ||||| |||||||||||||||||||    
T  39323308 taattacactgaattatgtaattttgtcaaattattagcggtgtc 39323264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 197
Target Start/End: Complemental strand, 1724 - 1644
Alignment:
Q  117 gtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||| |||| |||||||| | |||||  |||||||| || ||||||||||||||| ||||||||||| |||||||    
T  1724 gtgtcggacatgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtc 1644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 197
Target Start/End: Original strand, 440 - 521
Alignment:
Q  116 ggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||| || |||||||| | |||||  | |||||||||| |||| | ||||||||||||||||||||| |||||    
T  440 ggtgtcggacacgcgtcgtgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagcagtgtc 521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 199
Target Start/End: Original strand, 44525 - 44586
Alignment:
Q  138 cgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtcag 199  Q
    ||||| ||||| ||||||||||||| |||||| ||||||| ||||||| |||||||||||||    
T  44525 cgataccgacacatataattacactgaattatgtgattttctcaaatttttagcggtgtcag 44586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 190
Target Start/End: Complemental strand, 14623 - 14537
Alignment:
Q  101 gattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattag 190  Q
    |||||||||||| | |||||||||||||||| |||||||| | |   |  | |||||||||| |||||| ||||||||||||||||||||    
T  14623 gattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacacc---acttgtaattacactgaattatgtgattttttcaaattattag 14537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 153 - 199
Target Start/End: Original strand, 17764 - 17810
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtcag 199  Q
    ||||||||||||||||| ||||||||||||||||||||  |||||||    
T  17764 taattacactaaattatgtgattttttcaaattattagttgtgtcag 17810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 1087 - 1030
Alignment:
Q  145 gacatatataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    |||| ||||| ||||||| |||||| | ||||||||||||||||||||||||| ||||    
T  1087 gacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgt 1030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 241639 - 241594
Alignment:
Q  152 ataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||||||||||| |||||||| |||||||||||| |||||    
T  241639 ataattacactaaattatgtgatttttccaaattattagctgtgtc 241594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 20216 - 20172
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||| |||||| ||||||||||||||||||||| |||||    
T  20216 taattacactgaattatgtgattttttcaaattattagctgtgtc 20172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 51855 - 51811
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||| |||||| ||||||||||||||||||||| |||||    
T  51855 taattacactgaattatgtgattttttcaaattattagctgtgtc 51811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 195
Target Start/End: Original strand, 68255 - 68299
Alignment:
Q  151 tataattacactaaattatatgattttttcaaattattagcggtg 195  Q
    |||||||| |||||||||||||||||| ||||||||||| |||||    
T  68255 tataattatactaaattatatgattttctcaaattattaacggtg 68299  T

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Target: scaffold0722 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 197
Target Start/End: Original strand, 7020 - 7091
Alignment:
Q  126 acgtgttgtgtccgatatcgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||||| | | |||  | |||||| |||||||||| | ||||||||||||||||||| |||||    
T  7020 acgtgttgtgtccgacacctacacttgtaattatactaaattatgtaattttttcaaattattagctgtgtc 7091  T

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Target: scaffold0227 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 7324 - 7363
Alignment:
Q  151 tataattacactaaattatatgattttttcaaattattag 190  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  7324 tataattacactaaattatgtgatttttccaaattattag 7363  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 135318 - 135376
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtcagtgt 202  Q
    ||||| ||||||||||||  |||||| ||||||| ||||||||||||| ||||| ||||    
T  135318 cgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcggtgt 135376  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 8054 - 8017
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattag 190  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  8054 taattacactgtattatatgattttttcaaattattag 8017  T

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Target: scaffold0039 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 84924 - 84973
Alignment:
Q  100 ggattaggcgtgttttggtgtcggacacgtgttgtgtccgatatcgacat 149  Q
    |||||||||||||  || ||||||||||||||||||| ||| ||||||||    
T  84924 ggattaggcgtgtcctgttgtcggacacgtgttgtgttcgacatcgacat 84973  T

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Target: scaffold0039; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 84979 - 85032
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    ||||||||||||||||||  |||||||||||||| | |||||| ||| ||||||    
T  84979 cgacatatataattacacataattatatgattttcttaaattagtagtggtgtc 85032  T

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Target: scaffold0027 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 46735 - 46690
Alignment:
Q  144 cgacatatataattacactaaattatatgattttttcaaattatta 189  Q
    |||||| | |||||||||| |||||| |||||||||||||||||||    
T  46735 cgacatttgtaattacactgaattatgtgattttttcaaattatta 46690  T

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Target: scaffold0066 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 33378 - 33422
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||| |||||| | ||||||||||||||||||| |||||    
T  33378 taattacactgaattatgttattttttcaaattattagctgtgtc 33422  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 92851 - 92807
Alignment:
Q  153 taattacactaaattatatgattttttcaaattattagcggtgtc 197  Q
    |||||||||| |||||| | ||||| |||||||||||||||||||    
T  92851 taattacactgaattatgtaattttctcaaattattagcggtgtc 92807  T

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