View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4219_low_10 (Length: 265)
Name: NF4219_low_10
Description: NF4219
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4219_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 18 - 256
Target Start/End: Complemental strand, 32272840 - 32272602
Alignment:
| Q |
18 |
tcttatagtattattcttaatctcattctttctcttgtttaatatgtctgcatgtgtatagaaaaacacacaagatttcattcatgtacaattgaatatt |
117 |
Q |
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| T |
32272840 |
tcttatagtattattcttaatctcattctttctcttgtttaatatgtctgcatgtgtatagaaaaacacacaagatttcattcatgtacaattgaatatt |
32272741 |
T |
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| Q |
118 |
ctatatttgagaatgttctatggatttaatattcttttattattttctcaattgaaaagcacagatccttttgttaaattaaaaaatcatactattcagc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32272740 |
ctatatttgagaatgttctatggatttaatattcttttattattttctcaattgaaaagcacagatccttttgttaaattaaaaaatcatactattcagc |
32272641 |
T |
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| Q |
218 |
attgcatagatactgacatattgttacttttataaataa |
256 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
32272640 |
attgcatagatactgacatattgttacttttataaataa |
32272602 |
T |
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