View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4220_high_1 (Length: 378)

Name: NF4220_high_1
Description: NF4220
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4220_high_1
NF4220_high_1
[»] chr4 (14 HSPs)
chr4 (47-365)||(42432558-42432868)
chr4 (171-296)||(49408412-49408537)
chr4 (148-310)||(49411145-49411307)
chr4 (155-288)||(45439426-45439559)
chr4 (117-278)||(46074828-46074989)
chr4 (213-288)||(42595354-42595429)
chr4 (113-290)||(5486467-5486643)
chr4 (113-290)||(29284765-29284941)
chr4 (114-290)||(44820741-44820916)
chr4 (118-232)||(52833348-52833462)
chr4 (176-298)||(15730867-15730989)
chr4 (218-292)||(398834-398908)
chr4 (145-215)||(1143033-1143103)
chr4 (261-290)||(221246-221275)
[»] chr7 (15 HSPs)
chr7 (117-292)||(19248796-19248971)
chr7 (147-298)||(30603708-30603859)
chr7 (176-292)||(16671121-16671237)
chr7 (176-292)||(17645489-17645605)
chr7 (113-290)||(35445339-35445515)
chr7 (219-298)||(23406249-23406328)
chr7 (113-288)||(41349525-41349700)
chr7 (186-298)||(7845958-7846060)
chr7 (145-290)||(31589840-31589985)
chr7 (186-298)||(7844588-7844694)
chr7 (261-294)||(2619712-2619745)
chr7 (206-288)||(21859140-21859222)
chr7 (261-290)||(2455652-2455681)
chr7 (124-229)||(43127362-43127467)
chr7 (216-288)||(778486-778558)
[»] chr1 (9 HSPs)
chr1 (120-298)||(34288265-34288443)
chr1 (146-298)||(30539522-30539674)
chr1 (113-290)||(29267814-29267990)
chr1 (150-234)||(40874274-40874358)
chr1 (199-284)||(44343937-44344022)
chr1 (162-277)||(23298033-23298148)
chr1 (145-229)||(51003902-51003986)
chr1 (261-289)||(12417043-12417071)
chr1 (163-226)||(25293786-25293850)
[»] chr3 (15 HSPs)
chr3 (147-292)||(5104436-5104581)
chr3 (121-298)||(37827333-37827509)
chr3 (122-271)||(52327297-52327446)
chr3 (176-292)||(17612650-17612766)
chr3 (121-288)||(5552058-5552224)
chr3 (113-290)||(29839779-29839955)
chr3 (113-290)||(24735837-24736013)
chr3 (117-258)||(24987757-24987898)
chr3 (176-288)||(42153473-42153579)
chr3 (248-296)||(6419363-6419411)
chr3 (147-290)||(3857969-3858112)
chr3 (171-298)||(26897218-26897345)
chr3 (248-288)||(24987904-24987944)
chr3 (261-290)||(23217138-23217167)
chr3 (204-289)||(52689604-52689689)
[»] chr5 (9 HSPs)
chr5 (121-287)||(9597530-9597695)
chr5 (176-292)||(35796892-35797008)
chr5 (113-290)||(42885167-42885343)
chr5 (113-230)||(16666547-16666663)
chr5 (148-289)||(16855861-16856002)
chr5 (117-243)||(22791797-22791923)
chr5 (261-290)||(1864608-1864637)
chr5 (149-229)||(1863906-1863986)
chr5 (254-290)||(1945078-1945114)
[»] chr8 (10 HSPs)
chr8 (110-292)||(5200182-5200362)
chr8 (147-292)||(1822494-1822638)
chr8 (147-292)||(1856939-1857083)
chr8 (145-298)||(8047690-8047843)
chr8 (117-298)||(16027603-16027783)
chr8 (176-298)||(22740627-22740748)
chr8 (147-291)||(24984288-24984432)
chr8 (248-298)||(23399185-23399235)
chr8 (148-290)||(33359425-33359567)
chr8 (113-230)||(41287534-41287650)
[»] chr6 (1 HSPs)
chr6 (150-298)||(685412-685560)
[»] chr2 (4 HSPs)
chr2 (186-289)||(39497379-39497482)
chr2 (113-290)||(15696814-15696990)
chr2 (224-298)||(25920910-25920984)
chr2 (261-289)||(4622523-4622551)
[»] scaffold0057 (1 HSPs)
scaffold0057 (206-290)||(49969-50053)


Alignment Details
Target: chr4 (Bit Score: 173; Significance: 6e-93; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 47 - 365
Target Start/End: Original strand, 42432558 - 42432868
Alignment:
Q  47 ggttttagaaaaataaaggaagaaattgaaattgtaaactttactagggtggcnnnnnnnnnntccgtacccgcggataaaatctgtcacgggtatgaga 146  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||          |||||||      |||||||||||||| |||| |||     
T  42432558 ggtttaagaaaaataaaggaagaaattgaaattgtaaactttactagggtggcaaaaaaaa--tccgtac------ataaaatctgtcacaggtacgagg 42432649  T
Q  147 cgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgcag 246  Q
    ||| ||| |||| |||||||||| |||||||||||||| |||||||||| | ||||||||||||||| | ||||||||||||||||||||||||||||||    
T  42432650 cggatagttaaatgggtatccacggataaaataaatgggtatttaattatctgttactttatggacatgaacacggatttgatgatactcatgcccgcag 42432749  T
Q  247 atatccgtacccattaataaattaagtaaattactaaaatatccatatgtatgcgtgcgtgtatgagtttggtgtctaaaaaaccgtagtttatcatgtg 346  Q
     |||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  42432750 gtatccgtacccactaataaattaagtaaattactaaaatatccatgtgtgtgcgtgcatgtatgagtttggtgtctaaaaaaccctagtttatcatgtg 42432849  T
Q  347 tagtgtacatcgctcttct 365  Q
    || |||||  |||||||||    
T  42432850 tactgtacgacgctcttct 42432868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 171 - 296
Target Start/End: Complemental strand, 49408537 - 49408412
Alignment:
Q  171 gataaaataaatggatatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaatta 270  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||| |||| |||||||||||| || ||||||| | ||| ||||||| |||||||||||    
T  49408537 gataaaataaatgggtatttaactacccgttactttatagacacgaacacagatttgatgatattcgtgcccgcgggtatacgtacccgttaataaatta 49408438  T
Q  271 agtaaattactaaaatatccatatgt 296  Q
    |||||||||||||||||| |||||||    
T  49408437 agtaaattactaaaatatacatatgt 49408412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 148 - 310
Target Start/End: Complemental strand, 49411307 - 49411145
Alignment:
Q  148 gggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgcaga 247  Q
    |||||| |||||  ||||| |||  |||||||||| | ||||||||||||||||||||||||||||| ||||| |||||||||||| |  |||||   ||    
T  49411307 gggtagttaaacaagtatctacaagtaaaataaattggtatttaattacccgttactttatggacacagacacagatttgatgatatttgtgcccaggga 49411208  T
Q  248 tatccgtacccattaataaattaagtaaattactaaaatatccatatgtatgcgtgcgtgtat 310  Q
    ||||| ||||| | ||||||||||||||||||||||||||||||||||| || ||| ||||||    
T  49411207 tatccatacccgtaaataaattaagtaaattactaaaatatccatatgtttgtgtgtgtgtat 49411145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 155 - 288
Target Start/End: Original strand, 45439426 - 45439559
Alignment:
Q  155 taaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgcagatatccgt 254  Q
    |||||||||||||   | || ||||||||| ||||||| ||||||||  ||||||||||  |||||||||||||||||||   ||||| | | |||||||    
T  45439426 taaacgggtatccgtgggtataataaatgggtatttaactacccgtttttttatggacatagacacggatttgatgatacctgtgcccacgggtatccgt 45439525  T
Q  255 acccattaataaattaagtaaattactaaaatat 288  Q
    | || |||||||||||||||||||||||||||||    
T  45439526 atccgttaataaattaagtaaattactaaaatat 45439559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 117 - 278
Target Start/End: Original strand, 46074828 - 46074989
Alignment:
Q  117 ccgcggataaaatctgtcacgggtatgagacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacgg 216  Q
    |||| |||||||||||| ||||  | ||||||||||| ||||||||||| |||  ||| | ||||| ||||||||| || ||||||||||||||| ||      
T  46074828 ccgcagataaaatctgttacggacacgagacgggtagttaaacgggtattcacgaatatagtaaattgatatttaactatccgttactttatggatacat 46074927  T
Q  217 acacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaatt 278  Q
    |||||||||| || |||||| | ||||| | ||||| ||| | |||||||||||||||||||    
T  46074928 acacggattttattatactcgtacccgcgggtatccatacgcgttaataaattaagtaaatt 46074989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 213 - 288
Target Start/End: Original strand, 42595354 - 42595429
Alignment:
Q  213 acggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaatat 288  Q
    |||||||||||||||||| ||| | |||||||  ||||||||||||||||||||||||| ||||||||||||||||    
T  42595354 acggacacggatttgatgttacccgtgcccgcgtatatccgtacccattaataaattaaataaattactaaaatat 42595429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 113 - 290
Target Start/End: Original strand, 5486467 - 5486643
Alignment:
Q  113 gtacccgcggataaaatctgtcacgggtatgagacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggac 212  Q
    |||||||||| |||||||  ||||||| | | ||||||||||||||||||||||||  | || ||| || || ||||| | ||||| ||| | |||| |     
T  5486467 gtacccgcgggtaaaatccatcacgggcacg-gacgggtagctaaacgggtatccatgggtataattaacgggtatttgactacccattattatatgaat 5486565  T
Q  213 acggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaatatcc 290  Q
    |||||||||||||||||| ||| ||| ||| | | || || |||||| ||||||||||| | ||||||||||||||||    
T  5486566 acggacacggatttgatggtacccatacccacgggtacccatacccaataataaattaacttaattactaaaatatcc 5486643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 113 - 290
Target Start/End: Original strand, 29284765 - 29284941
Alignment:
Q  113 gtacccgcggataaaatctgtcacgggtatgagacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggac 212  Q
    |||||||||| |||||||  ||||||| | | ||||||||||||||||||||||||  | || ||| || || ||||| | ||||| ||| | |||| |     
T  29284765 gtacccgcgggtaaaatccatcacgggcacg-gacgggtagctaaacgggtatccatgggtataattaacgggtatttgactacccattattatatgaat 29284863  T
Q  213 acggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaatatcc 290  Q
    |||||||||||||||||| ||| ||| ||| | | || || |||||| ||||||||||| | ||||||||||||||||    
T  29284864 acggacacggatttgatggtacccatacccacgggtacccatacccaataataaattaacttaattactaaaatatcc 29284941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 114 - 290
Target Start/End: Complemental strand, 44820916 - 44820741
Alignment:
Q  114 tacccgcggataaaatctgtcacgggtatgagacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggaca 213  Q
    ||||||||| |||||||  ||||||| | | ||||||||||||||||||||||||  | || ||| || || ||||| | ||||| ||| | |||| | |    
T  44820916 tacccgcgggtaaaatccatcacgggcacg-gacgggtagctaaacgggtatccatgggtataattaacgggtatttgactacccattattatatgaata 44820818  T
Q  214 cggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaatatcc 290  Q
    ||||||||||||||||| ||| ||| ||| | | || || |||||| ||||||||||| | ||||||||||||||||    
T  44820817 cggacacggatttgatggtacccatacccacgggtacccatacccaataataaattaacttaattactaaaatatcc 44820741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 118 - 232
Target Start/End: Original strand, 52833348 - 52833462
Alignment:
Q  118 cgcggataaaatctgtcacgggtatgagacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacgga 217  Q
    |||||||||||||||||| ||| |   | ||| ||| |||||||||| | || |||| |||||| || ||||||||||||||||||||| ||||||| |     
T  52833348 cgcggataaaatctgtcaagggcactggccggatagttaaacgggtacctacggatataataaacgggtatttaattacccgttactttttggacaccgg 52833447  T
Q  218 cacggatttgatgat 232  Q
    |||||||||||||||    
T  52833448 cacggatttgatgat 52833462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 298
Target Start/End: Original strand, 15730867 - 15730989
Alignment:
Q  176 aataaatggatatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaa 275  Q
    |||||| || |||||||| | |||||| ||||||| |||  | |||||||||||||||  | ||| ||| | |||||||| || ||||||||||||||||    
T  15730867 aataaacgggtatttaatcatccgttattttatgggcacatatacggatttgatgatatccgtgctcgcgggtatccgtatccgttaataaattaagtaa 15730966  T
Q  276 attactaaaatatccatatgtat 298  Q
     ||||||||||||| || |||||    
T  15730967 tttactaaaatatctatgtgtat 15730989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 292
Target Start/End: Complemental strand, 398908 - 398834
Alignment:
Q  218 cacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaatatccat 292  Q
    ||||||||||||||||| | |  | || ||||| |||| || ||||||||||||||||| || ||||||||||||    
T  398908 cacggatttgatgatacccgtatctgcggatattcgtatccgttaataaattaagtaaactattaaaatatccat 398834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 1143033 - 1143103
Alignment:
Q  145 gacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacg 215  Q
    ||||||||||||||||| ||||||||| || |||||| || ||||| | ||||| ||| | ||||||||||    
T  1143033 gacgggtagctaaacggatatccacaggtataataaacgggtatttgactacccattattatatggacacg 1143103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 290
Target Start/End: Original strand, 221246 - 221275
Alignment:
Q  261 taataaattaagtaaattactaaaatatcc 290  Q
    ||||||||||||||||||||||||||||||    
T  221246 taataaattaagtaaattactaaaatatcc 221275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 117 - 292
Target Start/End: Complemental strand, 19248971 - 19248796
Alignment:
Q  117 ccgcggataaaatctgtcacgggtatgagacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacgg 216  Q
    ||||||||||||||||||| ||| |   ||||||||||||||||| || |||||| || ||||||||| ||||||| |||||||||||||||||||||||    
T  19248971 ccgcggataaaatctgtcatgggcacatgacgggtagctaaacggatacccacaggtataataaatgggtatttaactacccgttactttatggacacgg 19248872  T
Q  217 acacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaatatccat 292  Q
    | |||||||||||||||    || |||||| ||||| ||||| ||||||||||||||||||||||||| |||||||    
T  19248871 atacggatttgatgatatcggtgtccgcaggtatccatacccgttaataaattaagtaaattactaaattatccat 19248796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 147 - 298
Target Start/End: Original strand, 30603708 - 30603859
Alignment:
Q  147 cgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgcag 246  Q
    |||||||||||| | ||| || | | || |||||| || |||||||  ||||||||||| ||||||||  | |||||||||||||||| | ||||||| |    
T  30603708 cgggtagctaaatgagtagccgcgggtataataaacgggtatttaacaacccgttacttcatggacacaaatacggatttgatgatacccgtgcccgctg 30603807  T
Q  247 atatccgtacccattaataaattaagtaaattactaaaatatccatatgtat 298  Q
     ||||||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  30603808 gtatccgtacccgttaataaattatgtaaattactaaaatatccatgtgtat 30603859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 176 - 292
Target Start/End: Original strand, 16671121 - 16671237
Alignment:
Q  176 aataaatggatatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaa 275  Q
    |||||| || ||||||| ||||| |||||| |||||||| |||||||||||||||||||   ||||||| | ||||||||||||| |||| |||||| ||    
T  16671121 aataaacgggtatttaactacccattacttaatggacactgacacggatttgatgatacctgtgcccgcgggtatccgtacccatcaatatattaagcaa 16671220  T
Q  276 attactaaaatatccat 292  Q
    |||||||||||| ||||    
T  16671221 attactaaaatacccat 16671237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 176 - 292
Target Start/End: Original strand, 17645489 - 17645605
Alignment:
Q  176 aataaatggatatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaa 275  Q
    |||||| || ||||||| ||||| |||||| |||||||| |||||||||||||||||||   ||||||| | ||||||||||||| |||| |||||| ||    
T  17645489 aataaacgggtatttaactacccattacttaatggacactgacacggatttgatgatacctgtgcccgcgggtatccgtacccatcaatatattaagcaa 17645588  T
Q  276 attactaaaatatccat 292  Q
    |||||||||||| ||||    
T  17645589 attactaaaatacccat 17645605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 113 - 290
Target Start/End: Complemental strand, 35445515 - 35445339
Alignment:
Q  113 gtacccgcggataaaatctgtcacgggtatgagacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggac 212  Q
    |||||||||| |||||||  ||||||| | | ||||||||||||||||||||||||  | || ||| || || ||||| | ||||| ||| | |||| |     
T  35445515 gtacccgcgggtaaaatccatcacgggcacg-gacgggtagctaaacgggtatccatgggtataattaacgggtatttgactacccattattatatgaat 35445417  T
Q  213 acggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaatatcc 290  Q
    |||||||||||||||||| ||| ||| ||| | | || || |||||| ||||||||||| | ||||||||||||||||    
T  35445416 acggacacggatttgatggtacccatacccacgggtacccatacccaataataaattaacttaattactaaaatatcc 35445339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 23406249 - 23406328
Alignment:
Q  219 acggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaatatccatatgtat 298  Q
    ||||||||||||||||   ||||||| | ||||||||||| ||||||||||||||||||||||||||||| ||| |||||    
T  23406249 acggatttgatgatacctgtgcccgcgggtatccgtacccgttaataaattaagtaaattactaaaatattcatgtgtat 23406328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 288
Target Start/End: Original strand, 41349525 - 41349700
Alignment:
Q  113 gtacccgcggataaaatctgtcacgggtatgagacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggac 212  Q
    ||||||||||||||||||| ||| |  |||||||||| ||||||||||  ||||||||| || |||| | || ||||||| ||| ||||||||||||||     
T  41349525 gtacccgcggataaaatctatcatgaatatgagacggatagctaaacgaatatccacaggtataatagaggggtatttaactactcgttactttatggat 41349624  T
Q  213 acggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaatat 288  Q
    ||  |||   ||||||||||| || ||  ||  | || | ||||||  ||||||||||| ||||||||||||||||    
T  41349625 acaaacataaatttgatgatattcgtggtcgtgggtacctgtacccgataataaattaaataaattactaaaatat 41349700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 186 - 298
Target Start/End: Complemental strand, 7846060 - 7845958
Alignment:
Q  186 tatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaa 285  Q
    ||||||| ||||||||| ||||||||||| |||||||||||||||          |||| | ||||||||||  ||||||||||||||||||||||||||    
T  7846060 tatttaactacccgttattttatggacacagacacggatttgatg----------ccgcgggtatccgtacctgttaataaattaagtaaattactaaaa 7845971  T
Q  286 tatccatatgtat 298  Q
    ||||||| |||||    
T  7845970 tatccatgtgtat 7845958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 145 - 290
Target Start/End: Original strand, 31589840 - 31589985
Alignment:
Q  145 gacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgc 244  Q
    ||||||||||||||||||||||||  | || ||| || || ||||| | ||||| ||| | |||| | |||||||||||||||||| ||| ||| ||| |    
T  31589840 gacgggtagctaaacgggtatccatgggtataattaacgggtatttgactacccattattatatgaatacggacacggatttgatggtacccatacccac 31589939  T
Q  245 agatatccgtacccattaataaattaagtaaattactaaaatatcc 290  Q
     | || || |||||| ||||||||||| | ||||||||||||||||    
T  31589940 gggtacccatacccaataataaattaacttaattactaaaatatcc 31589985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 186 - 298
Target Start/End: Complemental strand, 7844694 - 7844588
Alignment:
Q  186 tatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaa 285  Q
    ||||||| || |||||| |||||||| || ||||||||||||||||||| |   ||||| | |||||||      |||||||||||||||||||||||||    
T  7844694 tatttaactaaccgttattttatggagacagacacggatttgatgatacccgcacccgcgggtatccgt------taataaattaagtaaattactaaaa 7844601  T
Q  286 tatccatatgtat 298  Q
    ||||||| |||||    
T  7844600 tatccatgtgtat 7844588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 2619745 - 2619712
Alignment:
Q  261 taataaattaagtaaattactaaaatatccatat 294  Q
    ||||||||||||||||||||||||||||||||||    
T  2619745 taataaattaagtaaattactaaaatatccatat 2619712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 21859140 - 21859222
Alignment:
Q  206 tatggacacggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaatat 288  Q
    |||||| |||||||||||||||||  ||   || ||| | | ||||| |||||  ||||||||||||||||||||||||||||    
T  21859140 tatggatacggacacggatttgattgtatcaatacccacgggtatccatacccgataataaattaagtaaattactaaaatat 21859222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 290
Target Start/End: Original strand, 2455652 - 2455681
Alignment:
Q  261 taataaattaagtaaattactaaaatatcc 290  Q
    ||||||||||||||||||||||||||||||    
T  2455652 taataaattaagtaaattactaaaatatcc 2455681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 229
Target Start/End: Complemental strand, 43127467 - 43127362
Alignment:
Q  124 taaaatctgtcacgggtatgagacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacggacacgga 223  Q
    ||||||| |||||||| | | ||||| ||||||| ||||||||||  | || ||||||||| ||||| | ||  | ||| | |||||| |||||||||||    
T  43127467 taaaatccgtcacgggcacgggacggatagctaagcgggtatccatgggtataataaatgggtatttgactattcattattatatggatacggacacgga 43127368  T
Q  224 tttgat 229  Q
    ||||||    
T  43127367 tttgat 43127362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 778486 - 778558
Alignment:
Q  216 gacacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaatat 288  Q
    ||||||||||||||  ||||||| | | | |||| || |||||  ||||||||||||||||| ||||||||||    
T  778486 gacacggatttgattgtactcatactcacggatacccatacccgataataaattaagtaaatgactaaaatat 778558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 4e-32; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 120 - 298
Target Start/End: Original strand, 34288265 - 34288443
Alignment:
Q  120 cggataaaatctgtcacgggtatgagacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacggaca 219  Q
    |||||||||||||||| ||| | |   |||||||||||||||||| || | | || |||||| || ||||||  |||| |||||||||||||||||||||    
T  34288265 cggataaaatctgtcatgggcacggagcgggtagctaaacgggtacccgcgggtataataaacgggtatttagctacctgttactttatggacacggaca 34288364  T
Q  220 cggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaatatccatatgtat 298  Q
    | ||||||||||||    ||||||| | ||||| ||||| ||||||| ||||||||||||||||||||||||| |||||    
T  34288365 cagatttgatgatatctgtgcccgcgggtatccatacccgttaataatttaagtaaattactaaaatatccatgtgtat 34288443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 146 - 298
Target Start/End: Original strand, 30539522 - 30539674
Alignment:
Q  146 acgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgca 245  Q
    ||||||||||||| ||||| |  | | || |||||| || ||||||| || |||||||||||||||||||||||| ||||||||||||| | |||||||     
T  30539522 acgggtagctaaatgggtacctgcgggtataataaacgggtatttaactatccgttactttatggacacggacacagatttgatgatacacgtgcccgcg 30539621  T
Q  246 gatatccgtacccattaataaattaagtaaattactaaaatatccatatgtat 298  Q
    | | ||||||||| ||||||||||| |||||||| |||||||| |||||||||    
T  30539622 ggtctccgtacccgttaataaattatgtaaattattaaaatattcatatgtat 30539674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 113 - 290
Target Start/End: Original strand, 29267814 - 29267990
Alignment:
Q  113 gtacccgcggataaaatctgtcacgggtatgagacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggac 212  Q
    |||||||||| |||||||  ||||||| | | ||||||||||||||||||||||||  | || ||| || || ||||| | ||||| ||| | |||| |     
T  29267814 gtacccgcgggtaaaatccatcacgggcacg-gacgggtagctaaacgggtatccatgggtataattaacgggtatttgactacccattattatatgaat 29267912  T
Q  213 acggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaatatcc 290  Q
    |||||||||||||||||| ||| ||| ||| | | || || |||||| ||||||||||| | ||||||||||||||||    
T  29267913 acggacacggatttgatggtacccatacccacgggtacccatacccaataataaattaacttaattactaaaatatcc 29267990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 150 - 234
Target Start/End: Original strand, 40874274 - 40874358
Alignment:
Q  150 gtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacggacacggatttgatgatac 234  Q
    |||| |||||||||| ||||| ||| |||||| || ||||||| || ||||||| ||||||||||||||||||||||||||||||    
T  40874274 gtagttaaacgggtacccacaaatataataaaagggtatttaactatccgttacgttatggacacggacacggatttgatgatac 40874358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 199 - 284
Target Start/End: Original strand, 44343937 - 44344022
Alignment:
Q  199 gttactttatggacacggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaa 284  Q
    |||||||||||| || ||| ||||||||||||||||   ||||||||| |||||||||||  ||||||||||||||| ||||||||    
T  44343937 gttactttatgggcatggatacggatttgatgatacctgtgcccgcaggtatccgtacccgataataaattaagtaatttactaaa 44344022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 277
Target Start/End: Complemental strand, 23298148 - 23298033
Alignment:
Q  162 gtatccacagataaaataaatggatatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgcagatatccgtacccatt 261  Q
    |||||||| | || ||||||||| ||||||| || || ||  |||||||| || |||||  |||||||||||||| ||||||||  ||||| |||||  |    
T  23298148 gtatccacgggtataataaatgggtatttaactatccatttttttatggatacagacacaaatttgatgatactcgtgcccgcatgtatccatacccgat 23298049  T
Q  262 aataaattaagtaaat 277  Q
    ||||||||||||||||    
T  23298048 aataaattaagtaaat 23298033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 145 - 229
Target Start/End: Original strand, 51003902 - 51003986
Alignment:
Q  145 gacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacggacacggatttgat 229  Q
    ||||||||||||||||||||||||| |||| |||||| |||||||| | || || ||| | |||||| ||||||||  |||||||    
T  51003902 gacgggtagctaaacgggtatccacggatataataaacggatatttgactatccattattatatggatacggacacaaatttgat 51003986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 289
Target Start/End: Original strand, 12417043 - 12417071
Alignment:
Q  261 taataaattaagtaaattactaaaatatc 289  Q
    |||||||||||||||||||||||||||||    
T  12417043 taataaattaagtaaattactaaaatatc 12417071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 25293786 - 25293850
Alignment:
Q  163 tatccacagataaaataaatggata-tttaattacccgttactttatggacacggacacggattt 226  Q
    ||||||||||||||||||||||||| ||||| |||||| || || ||||| |||||  |||||||    
T  25293786 tatccacagataaaataaatggatattttaactacccgctaattaatggatacggatgcggattt 25293850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 2e-31; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 147 - 292
Target Start/End: Complemental strand, 5104581 - 5104436
Alignment:
Q  147 cgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgcag 246  Q
    |||||||||||||| | | |  |||||| |||||| |  ||||||| |||||||||||||||||||||| |||||||||||||||||| | || |||||     
T  5104581 cgggtagctaaacgtgaaccagcagatataataaacgagtatttaactacccgttactttatggacacgaacacggatttgatgatacccgtgtccgcat 5104482  T
Q  247 atatccgtacccattaataaattaagtaaattactaaaatatccat 292  Q
     |||  |||||| |||||||||||||||||||||||||||||||||    
T  5104481 gtatttgtacccgttaataaattaagtaaattactaaaatatccat 5104436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 121 - 298
Target Start/End: Complemental strand, 37827509 - 37827333
Alignment:
Q  121 ggataaaatctgtcacgggtatgagacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacggacac 220  Q
    ||||||||||||||| ||| | |   ||||||||||||||||||||| | | || ||||||    ||||||| | || |||||||||||| |||||| ||    
T  37827509 ggataaaatctgtcatgggcacggagcgggtagctaaacgggtatccgcgggtataataaactagtatttaacttcc-gttactttatgggcacggatac 37827411  T
Q  221 ggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaatatccatatgtat 298  Q
    |||||||||||||| | ||||||| | ||||||||||| |||||||||||||||| ||||||||||||| || |||||    
T  37827410 ggatttgatgatacccgtgcccgcgggtatccgtacccgttaataaattaagtaatttactaaaatatctatgtgtat 37827333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 122 - 271
Target Start/End: Original strand, 52327297 - 52327446
Alignment:
Q  122 gataaaatctgtcacgggtatgagacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacggacacg 221  Q
    |||||||||||||| ||| |||   |||||||||||||||||||||||   || ||||||  | ||||||| || ||||||||||||||  | ||| |||    
T  52327297 gataaaatctgtcatgggcatggagcgggtagctaaacgggtatccacgattataataaacaggtatttaactatccgttactttatggggatggatacg 52327396  T
Q  222 gatttgatgatactcatgcccgcagatatccgtacccattaataaattaa 271  Q
    ||||||||||||||| |||||| || ||||||||||| ||||||||||||    
T  52327397 gatttgatgatactcgtgcccgaaggtatccgtacccgttaataaattaa 52327446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 176 - 292
Target Start/End: Complemental strand, 17612766 - 17612650
Alignment:
Q  176 aataaatggatatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaa 275  Q
    ||||||||  ||||||| ||||| ||| ||||| |||||||| |||||||||||||||| | |||| || | ||||||||||| ||||||| | ||||||    
T  17612766 aataaatgagtatttaactacccattattttatagacacggatacggatttgatgatacccgtgcctgcgggtatccgtacccgttaataagtgaagtaa 17612667  T
Q  276 attactaaaatatccat 292  Q
    |||||||||||||||||    
T  17612666 attactaaaatatccat 17612650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 121 - 288
Target Start/End: Complemental strand, 5552224 - 5552058
Alignment:
Q  121 ggataaaatctgtcacgggtatgagacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacggacac 220  Q
    |||||||||| |||| ||| | | | ||| || |||||||||||||| | | || |||||| || ||||||| |||| ||||||||||||| || |||||    
T  5552224 ggataaaatccgtcatgggcacggggcggataactaaacgggtatccgcgggtataataaacgggtatttaactacc-gttactttatggatacagacac 5552126  T
Q  221 ggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaatat 288  Q
    |||||||||||||||| |||||||   ||||  ||||  |||||||||||| ||||||||||||||||    
T  5552125 ggatttgatgatactcgtgcccgcgagtatcaatacctgttaataaattaaataaattactaaaatat 5552058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 113 - 290
Target Start/End: Complemental strand, 29839955 - 29839779
Alignment:
Q  113 gtacccgcggataaaatctgtcacgggtatgagacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggac 212  Q
    |||||||||| |||||||  ||||||| | | ||||||||||||||||||||||||  |||| ||| || || ||||| | ||||| ||| | |||| |     
T  29839955 gtacccgcgggtaaaatccatcacgggcacg-gacgggtagctaaacgggtatccatggatataattaacgggtatttgactacccattattatatgaat 29839857  T
Q  213 acggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaatatcc 290  Q
    |||||||||||||||||| ||| ||| ||| | | || || |||||| ||||||||||| | ||||||||||||||||    
T  29839856 acggacacggatttgatggtacccatacccacgggtacccatacccaataataaattaacttaattactaaaatatcc 29839779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 113 - 290
Target Start/End: Complemental strand, 24736013 - 24735837
Alignment:
Q  113 gtacccgcggataaaatctgtcacgggtatgagacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggac 212  Q
    |||||||||| |||||||  ||||||| | | ||||||||||||||||||||||||    || ||| || || ||||| | ||||| ||| | |||| |     
T  24736013 gtacccgcgggtaaaatccatcacgggcacg-gacgggtagctaaacgggtatccatgagtataattaacgggtatttgactacccattattatatgaat 24735915  T
Q  213 acggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaatatcc 290  Q
    |||||||||||||||||| ||| ||| ||| | | || || |||||| ||||||||||| | ||||||||||||||||    
T  24735914 acggacacggatttgatggtacccatacccacgggtacccatacccaataataaattaacttaattactaaaatatcc 24735837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 117 - 258
Target Start/End: Original strand, 24987757 - 24987898
Alignment:
Q  117 ccgcggataaaatctgtcacgggtatgagacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacgg 216  Q
    |||| ||||||||| | || ||| ||| | ||||||| |||| | ||| || ||| || |||||| || ||||||| ||||||||||||||||||||||     
T  24987757 ccgcagataaaatccgccatgggcatggggcgggtagttaaatgagtacccgcaggtataataaacgggtatttaactacccgttactttatggacacga 24987856  T
Q  217 acacggatttgatgatactcatgcccgcagatatccgtaccc 258  Q
    |||||||||||||||||| | | ||||  | |||||||||||    
T  24987857 acacggatttgatgatacccgtacccgtgggtatccgtaccc 24987898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 176 - 288
Target Start/End: Complemental strand, 42153579 - 42153473
Alignment:
Q  176 aataaatggatatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaa 275  Q
    ||||||||| ||||||||||| |||||||||||| |||||||      ||||||| |||   | ||||| ||||||||||| | |||||||||||| |||    
T  42153579 aataaatgggtatttaattactcgttactttatgaacacgga------tttgatggtacctgtacccgcggatatccgtactcgttaataaattaattaa 42153486  T
Q  276 attactaaaatat 288  Q
    |||||||||||||    
T  42153485 attactaaaatat 42153473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 6419411 - 6419363
Alignment:
Q  248 tatccgtacccattaataaattaagtaaattactaaaatatccatatgt 296  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  6419411 tatccgtatccaataataaattaagtaaattactaaaatatccatatgt 6419363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 290
Target Start/End: Original strand, 3857969 - 3858112
Alignment:
Q  147 cgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgcag 246  Q
    |||||||| |||||||||||||  |||| |||||| || ||||| | ||||| ||| | |||||| |||||||| ||||||||  ||| ||| ||| |||    
T  3857969 cgggtagcgaaacgggtatccatggatataataaacgggtatttgactacccattattatatggatacggacacagatttgatagtacccatacccacag 3858068  T
Q  247 atatccgtacccattaataaattaagtaaattactaaaatatcc 290  Q
     || ||  | ||  ||||||||||||||||||| ||||||||||    
T  3858069 gtacccaaatccgataataaattaagtaaattattaaaatatcc 3858112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 298
Target Start/End: Original strand, 26897218 - 26897345
Alignment:
Q  171 gataaaataaatggatatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaatta 270  Q
    |||| |||||| ||||||| |  || || ||||||||||||||| |||||  ||||||||||| |  |||   | | ||||| ||| |||||||||||||    
T  26897218 gatataataaacggatattaatctatccattactttatggacactgacacatatttgatgataattgtgctaacgggtatccatactcattaataaatta 26897317  T
Q  271 agtaaattactaaaatatccatatgtat 298  Q
    |||||||||||||||||| ||| |||||    
T  26897318 agtaaattactaaaatattcatgtgtat 26897345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 24987904 - 24987944
Alignment:
Q  248 tatccgtacccattaataaattaagtaaattactaaaatat 288  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  24987904 tatccgtacccattaataaattaaataaattactaaaatat 24987944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 290
Target Start/End: Complemental strand, 23217167 - 23217138
Alignment:
Q  261 taataaattaagtaaattactaaaatatcc 290  Q
    ||||||||||||||||||||||||||||||    
T  23217167 taataaattaagtaaattactaaaatatcc 23217138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 289
Target Start/End: Complemental strand, 52689689 - 52689604
Alignment:
Q  204 tttatggacacggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaatatc 289  Q
    |||||||| | |||||| ||||||||||||||  ||||| ||| |  || || |   |||||||||||||||||||||||||||||    
T  52689689 tttatggatatggacacagatttgatgatacttgtgcccacaggtgcccatatctgataataaattaagtaaattactaaaatatc 52689604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 1e-29; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 121 - 287
Target Start/End: Original strand, 9597530 - 9597695
Alignment:
Q  121 ggataaaatctgtcacgggtatgagacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacggacac 220  Q
    |||||||||| || | ||| | |||||||||||||||| ||||| || ||  || ||||||||| ||||||| || |||||||||||||||||| |||||    
T  9597530 ggataaaatccgtgatgggcacgagacgggtagctaaa-gggtacccgcaagtataataaatgggtatttaactatccgttactttatggacacagacac 9597628  T
Q  221 ggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaata 287  Q
    |||||| ||||||||| |||||||   |||||||||   |||||||||||||||||||| |||||||    
T  9597629 ggatttaatgatactcgtgcccgcgagtatccgtacattttaataaattaagtaaattattaaaata 9597695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 176 - 292
Target Start/End: Complemental strand, 35797008 - 35796892
Alignment:
Q  176 aataaatggatatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaa 275  Q
    |||||| || ||||||| |||| |||||||||||||||| |||||  ||||||||||||   || ||||  |||||||||| | ||||||||||||||||    
T  35797008 aataaacgggtatttaactaccggttactttatggacacagacacatatttgatgatacatgtgtccgcgtatatccgtactcgttaataaattaagtaa 35796909  T
Q  276 attactaaaatatccat 292  Q
    |||||||||||||||||    
T  35796908 attactaaaatatccat 35796892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 113 - 290
Target Start/End: Original strand, 42885167 - 42885343
Alignment:
Q  113 gtacccgcggataaaatctgtcacgggtatgagacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggac 212  Q
    |||||||||| |||||||  ||||||| | | ||||||||||||||||||||||||  | || ||| || || ||||| | ||||| ||| | |||| |     
T  42885167 gtacccgcgggtaaaatccatcacgggcacg-gacgggtagctaaacgggtatccatgggtataattaacgggtatttgactacccattattatatgaat 42885265  T
Q  213 acggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaatatcc 290  Q
    | |||||||||||||||| ||| ||| ||| | | || || |||||| ||||||||||| | ||||||||||||||||    
T  42885266 atggacacggatttgatggtacccatacccacgggtacccatacccaataataaattaacttaattactaaaatatcc 42885343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 230
Target Start/End: Complemental strand, 16666663 - 16666547
Alignment:
Q  113 gtacccgcggataaaatctgtcacgggtatgagacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggac 212  Q
    |||||||||| |||||||  ||||||||| | ||||||||||||||||||||||||  | || ||| || || ||||| | ||||| ||| | |||| |     
T  16666663 gtacccgcgggtaaaatccatcacgggtacg-gacgggtagctaaacgggtatccatgggtataattaacgggtatttgactacccattattatatgaat 16666565  T
Q  213 acggacacggatttgatg 230  Q
    ||||||||||||||||||    
T  16666564 acggacacggatttgatg 16666547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 289
Target Start/End: Complemental strand, 16856002 - 16855861
Alignment:
Q  148 gggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgcaga 247  Q
    ||||||||||||| |||||||||  || |||||| || ||||| | || || ||| | |||||| | |||||||||||||||  || |||| ||  | |     
T  16856002 gggtagctaaacgagtatccacaagtataataaacgggtatttgactatccattattatatggatatggacacggatttgattgtattcatacctacggg 16855903  T
Q  248 tatccgtacccattaataaattaagtaaattactaaaatatc 289  Q
    || || |||||  |||||||||||||||||||||||||||||    
T  16855902 tacccatacccgataataaattaagtaaattactaaaatatc 16855861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 243
Target Start/End: Original strand, 22791797 - 22791923
Alignment:
Q  117 ccgcggataaaatctgtcacgggtatgagacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacgg 216  Q
    ||||||||||| || |||| || || | || | ||||||||||||||| |  |||  |||||||| |  ||||||| |||||||| ||||| |||||||     
T  22791797 ccgcggataaattccgtcatggatacgggatgagtagctaaacgggtacctgcaggaaaaataaacgtgtatttaaatacccgttgctttacggacacga 22791896  T
Q  217 acacggatttgatgatactcatgcccg 243  Q
    ||| |||||||||||||| ||| ||||    
T  22791897 acatggatttgatgatacccatacccg 22791923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 290
Target Start/End: Original strand, 1864608 - 1864637
Alignment:
Q  261 taataaattaagtaaattactaaaatatcc 290  Q
    ||||||||||||||||||||||||||||||    
T  1864608 taataaattaagtaaattactaaaatatcc 1864637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 1863906 - 1863986
Alignment:
Q  149 ggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacggacacggatttgat 229  Q
    |||||||||||||||||||||   || ||||||||| ||||||| || || ||| | |||||| ||| ||||| |||||||    
T  1863906 ggtagctaaacgggtatccacgagtataataaatgggtatttaactatccattattatatggatacgaacacgaatttgat 1863986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 290
Target Start/End: Original strand, 1945078 - 1945114
Alignment:
Q  254 tacccattaataaattaagtaaattactaaaatatcc 290  Q
    |||||| |||||||||||||| |||||||||||||||    
T  1945078 tacccaataataaattaagtatattactaaaatatcc 1945114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 4e-29; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 110 - 292
Target Start/End: Complemental strand, 5200362 - 5200182
Alignment:
Q  110 tccgtacccgcggataaaatctgtcacgggtatgagacgggtagctaaacgggtatccacaga-taaaataaatggatatttaattacccgttactttat 208  Q
    ||||||||||||||||   ||||||| ||| |   ||||||||||||||| ||||||||| |  || |||||| || ||||||| |||| ||||||| ||    
T  5200362 tccgtacccgcggata---tctgtcatgggcacatgacgggtagctaaacaggtatccacggggtataataaacgggtatttaactacctgttacttcat 5200266  T
Q  209 ggacacggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaatatccat 292  Q
    |||||||| |||  |||||||||||||| ||   ||  |||||||||||| |||||||||||||||||||||||||||||||||    
T  5200265 ggacacgggcacaaatttgatgatactcgtgtatgcgaatatccgtacccgttaataaattaagtaaattactaaaatatccat 5200182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 147 - 292
Target Start/End: Original strand, 1822494 - 1822638
Alignment:
Q  147 cgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgcag 246  Q
    |||||||||||| || || || ||| || |||||| || ||||||| || ||||||||| |||||||| ||||||||||||||||||| | | ||||| |    
T  1822494 cgggtagctaaatggatacccgcaggtataataaacgggtatttaactatccgttacttaatggacacagacacggatttgatgatacccgttcccgc-g 1822592  T
Q  247 atatccgtacccattaataaattaagtaaattactaaaatatccat 292  Q
     ||||||||||| |||||| ||||||||||||||||||||| ||||    
T  1822593 gtatccgtacccgttaatatattaagtaaattactaaaatacccat 1822638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 147 - 292
Target Start/End: Original strand, 1856939 - 1857083
Alignment:
Q  147 cgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgcag 246  Q
    |||||||||||| || || || ||| || |||||| || ||||||| || ||||||||| |||||||| ||||||||||||||||||| | | ||||| |    
T  1856939 cgggtagctaaatggatacccgcaggtataataaacgggtatttaactatccgttacttaatggacacagacacggatttgatgatacccgttcccgc-g 1857037  T
Q  247 atatccgtacccattaataaattaagtaaattactaaaatatccat 292  Q
     ||||||||||| |||||| ||||||||||||||||||||| ||||    
T  1857038 gtatccgtacccgttaatatattaagtaaattactaaaatacccat 1857083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 145 - 298
Target Start/End: Complemental strand, 8047843 - 8047690
Alignment:
Q  145 gacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgc 244  Q
    |||||||||||||| | |||||  ||| || |||||| || ||||||| || ||||||||||||||||| ||||| |||||||||||||| | || ||||    
T  8047843 gacgggtagctaaatgcgtatcagcaggtataataaacgggtatttaactatccgttactttatggacatggacatggatttgatgatacccgtgtccgc 8047744  T
Q  245 agatatccgtacccattaataaattaagtaaattactaaaatatccatatgtat 298  Q
     | |||||||| |  |||||||||||| ||||||| |||||||| ||| |||||    
T  8047743 gggtatccgtatctgttaataaattaaataaattattaaaatattcatgtgtat 8047690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 117 - 298
Target Start/End: Original strand, 16027603 - 16027783
Alignment:
Q  117 ccgcggataaaatctgtcacgggtatgagacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacgg 216  Q
    |||| |||||||||||||||||| ||  | | | |||| ||||| |||||| | | ||||||||  || | ||||||||||||||| |||||| |||||     
T  16027603 ccgcagataaaatctgtcacgggcatagggctgatagccaaacgagtatccgcggttaaaataacggg-tgtttaattacccgttattttatgaacacga 16027701  T
Q  217 acacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaatatccatatgtat 298  Q
    | || | |||||||||| |||||| ||| | |||| |||||| ||||||||| ||||||||||||||||||||||| |||||    
T  16027702 atacaggtttgatgatattcatgctcgcgggtatctgtacccgttaataaatcaagtaaattactaaaatatccatgtgtat 16027783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 176 - 298
Target Start/End: Original strand, 22740627 - 22740748
Alignment:
Q  176 aataaatggatatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaa 275  Q
    |||||| || ||||||| || ||||||||||||||||| || ||| ||||||||||||| | || | || | ||| ||||| ||||||||||||||||||    
T  22740627 aataaacgggtatttaactatccgttactttatggacatgggcacagatttgatgatacccgtgtctgcgggtattcgtactcattaataaattaagtaa 22740726  T
Q  276 attactaaaatatccatatgtat 298  Q
    |||||| |||||||||| |||||    
T  22740727 attact-aaatatccatgtgtat 22740748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 291
Target Start/End: Complemental strand, 24984432 - 24984288
Alignment:
Q  147 cgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgcag 246  Q
    |||||||||||| ||||| |||||  || |||||  || ||||||| ||||||||| ||||||||  |||||| | |||||||||||||  ||||||  |    
T  24984432 cgggtagctaaatgggtacccacaagtataataagcgggtatttaactacccgttattttatggatccggacatgaatttgatgatacttgtgcccgtgg 24984333  T
Q  247 atatccgtacccattaataaattaagtaaattactaaaatatcca 291  Q
     ||||| ||||| ||||||||||||  |||| |||||| ||||||    
T  24984332 gtatccatacccgttaataaattaaaaaaatgactaaattatcca 24984288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 248 - 298
Target Start/End: Complemental strand, 23399235 - 23399185
Alignment:
Q  248 tatccgtacccattaataaattaagtaaattactaaaatatccatatgtat 298  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| |||||    
T  23399235 tatccgtactcgttaataaattaagtaaattactaaaatatccatgtgtat 23399185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 148 - 290
Target Start/End: Complemental strand, 33359567 - 33359425
Alignment:
Q  148 gggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgcaga 247  Q
    ||||||| |||||||||||||| | || ||| || || ||||| | ||||| ||| | |||||| |||| |||||||||||| |||  ||| ||| | ||    
T  33359567 gggtagcaaaacgggtatccacgggtataatgaacgggtatttgactacccattattatatggatacgggcacggatttgattatatccatacccacgga 33359468  T
Q  248 tatccgtacccattaataaattaagtaaattactaaaatatcc 290  Q
    || || ||||   ||||| ||||||||||||||||||||||||    
T  33359467 tacccatacctgataatatattaagtaaattactaaaatatcc 33359425  T

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Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 230
Target Start/End: Original strand, 41287534 - 41287650
Alignment:
Q  113 gtacccgcggataaaatctgtcacgggtatgagacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggac 212  Q
    |||||||||| |||||||  ||||||| | | ||||||||||||||||||||||||  |||| ||| || || ||||| | ||||| ||| | |||| |     
T  41287534 gtacccgcgggtaaaatccatcacgggcacg-gacgggtagctaaacgggtatccatggatataattaacgggtatttgactacccattattatatgaat 41287632  T
Q  213 acggacacggatttgatg 230  Q
    ||||||||||||||||||    
T  41287633 acggacacggatttgatg 41287650  T

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Target: chr6 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 150 - 298
Target Start/End: Original strand, 685412 - 685560
Alignment:
Q  150 gtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgcagata 249  Q
    |||| ||||||||||  | |||||| ||||||||| ||||||| ||||  |||||||||||||||||| || ||||||| ||||||| || |||  | ||    
T  685412 gtagttaaacgggtactcgcagatataataaatgggtatttaactacctattactttatggacacggatacagatttgacgatactcgtgtccgtgggta 685511  T
Q  250 tccgtacccattaataaattaagtaaattactaaaatatccatatgtat 298  Q
    | ||||||| ||||||||||||||||||||  ||||||||||| |||||    
T  685512 tgcgtacccgttaataaattaagtaaattataaaaatatccatgtgtat 685560  T

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Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 186 - 289
Target Start/End: Original strand, 39497379 - 39497482
Alignment:
Q  186 tatttaattacccgttactttatggacacggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaa 285  Q
    ||||||| || |||||||||||||| || ||| |||||||||||||||| | ||||||| | ||||| ||||| ||||||||| |||||| |||||||||    
T  39497379 tatttaactatccgttactttatgggcatggatacggatttgatgatacccgtgcccgcgggtatccatacccgttaataaatcaagtaatttactaaaa 39497478  T
Q  286 tatc 289  Q
    ||||    
T  39497479 tatc 39497482  T

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Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 113 - 290
Target Start/End: Complemental strand, 15696990 - 15696814
Alignment:
Q  113 gtacccgcggataaaatctgtcacgggtatgagacgggtagctaaacgggtatccacagataaaataaatggatatttaattacccgttactttatggac 212  Q
    |||||||||| |||||||  ||||||| | | ||||||||||||||||||||||||  | || ||| || || ||||| | ||||| ||| | |||| |     
T  15696990 gtacccgcgggtaaaatccatcacgggcacg-gacgggtagctaaacgggtatccatgggtataattaacgggtatttgactacccattattatatgaat 15696892  T
Q  213 acggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaatatcc 290  Q
    |||||||||||||||||| ||  ||| ||| | |||| || |||||| ||||||||||| | ||||||||||||||||    
T  15696891 acggacacggatttgatggtatccatacccacggatacccatacccaataataaattaacttaattactaaaatatcc 15696814  T

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Target: chr2; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 224 - 298
Target Start/End: Complemental strand, 25920984 - 25920910
Alignment:
Q  224 tttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaatatccatatgtat 298  Q
    ||||||||||| | ||||||| | ||| ||||||| ||||||||||||||||||||||||||||||||| |||||    
T  25920984 tttgatgatacccgtgcccgcgggtattcgtacccgttaataaattaagtaaattactaaaatatccatgtgtat 25920910  T

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Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 289
Target Start/End: Original strand, 4622523 - 4622551
Alignment:
Q  261 taataaattaagtaaattactaaaatatc 289  Q
    |||||||||||||||||||||||||||||    
T  4622523 taataaattaagtaaattactaaaatatc 4622551  T

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Target: scaffold0057 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 290
Target Start/End: Complemental strand, 50053 - 49969
Alignment:
Q  206 tatggacacggacacggatttgatgatactcatgcccgcagatatccgtacccattaataaattaagtaaattactaaaatatcc 290  Q
    |||||| ||||||||||||||||| |||  ||| ||| | | ||  | |||||  ||||||||||||||||||||||||||||||    
T  50053 tatggatacggacacggatttgattataaccatacccacgggtactcatacccgataataaattaagtaaattactaaaatatcc 49969  T

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