View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4220_low_6 (Length: 217)
Name: NF4220_low_6
Description: NF4220
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4220_low_6 |
 | |
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| [»] chr4 (2 HSPs) |
| |
|
| [»] scaffold0026 (2 HSPs) |
| | |
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| [»] scaffold1773 (1 HSPs) |
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| [»] scaffold0006 (1 HSPs) |
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| [»] scaffold0924 (1 HSPs) |
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| [»] scaffold0029 (1 HSPs) |
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| [»] scaffold0117 (2 HSPs) |
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| [»] scaffold0025 (1 HSPs) |
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| [»] scaffold0553 (1 HSPs) |
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| [»] scaffold0544 (1 HSPs) |
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| [»] scaffold0247 (1 HSPs) |
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| [»] scaffold0634 (1 HSPs) |
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| [»] scaffold0058 (1 HSPs) |
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| [»] scaffold0476 (1 HSPs) |
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| [»] scaffold0077 (1 HSPs) |
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| [»] scaffold0090 (1 HSPs) |
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| [»] scaffold0456 (2 HSPs) |
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| [»] scaffold0154 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 174; Significance: 9e-94; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 11848131 - 11847910
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaa-----ttgggggttagggtttgatgacgattctaaagaggaatgagtaatga |
95 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||| | |||| ||| |||||||||||||||||||||||| |||||||||| ||||||| |
|
|
| T |
11848131 |
ctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaatcaattgagggttagggtttgatgacgattctgaagaggaatgggtaatga |
11848032 |
T |
|
| Q |
96 |
tcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaa |
195 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11848031 |
tcatgttaatccttttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaa |
11847932 |
T |
|
| Q |
196 |
ttgatgaatttgtgtatgatga |
217 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
11847931 |
ttgatgaatttgtgtatgatga |
11847910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 8045870 - 8046083
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
||||||||||||||| |||||||| | ||||||||||| || ||||||||| |||||||||||||| || ||||| ||| | |||| |||| ||| ||| |
|
|
| T |
8045870 |
ctataatttctgaaa-ttgacctaattgcatagttttggaa-aataaattgagggttagggtttgacgagaattctgaagggaaatgggtaaagataatg |
8045967 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat |
200 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
8045968 |
ttaattctcttgtaatataatgttcagaatgaaaacttaatccttgttgttgctgtgatcataaattgattgaaatttatgagtgattggatgaattgat |
8046067 |
T |
|
| Q |
201 |
gaatttgtgtatgatg |
216 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
8046068 |
gaatttgtgtatgatg |
8046083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 160; Significance: 2e-85; HSPs: 11)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 15168193 - 15167979
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| |||| ||||||| ||||||||||||||||| |||||| ||| | |||| |||||||||||| |
|
|
| T |
15168193 |
ctataatttctgaaaattgacctaattgcatagttttggaaga-taaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatg |
15168095 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat |
200 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15168094 |
ttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat |
15167995 |
T |
|
| Q |
201 |
gaatttgtgtatgatg |
216 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
15167994 |
gaatttgtgtatgatg |
15167979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 18873378 - 18873164
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| |||| ||||||| ||||||||||||||||| |||||| ||| | |||| |||||||||||| |
|
|
| T |
18873378 |
ctataatttctgaaaattgacctaattgcatagttttggaaga-taaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatg |
18873280 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat |
200 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18873279 |
ttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat |
18873180 |
T |
|
| Q |
201 |
gaatttgtgtatgatg |
216 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
18873179 |
gaatttgtgtatgatg |
18873164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 10895828 - 10896042
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagtttt-gaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcat |
99 |
Q |
| |
|
||||||||| |||||||||||||| | |||||||||| | |||| ||||||| ||||||||||||||||| |||||| | | |||||| ||| ||||||| |
|
|
| T |
10895828 |
ctataatttttgaaaattgacctaattgcatagtttttggaaga-taaattgtgggttagggtttgatgatgattctgagg-ggaatgggtattgatcat |
10895925 |
T |
|
| Q |
100 |
gttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattga |
199 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10895926 |
gttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaattgattgaaaattatgagtgattggatgaattga |
10896025 |
T |
|
| Q |
200 |
tgaatttgtgtatgatg |
216 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
10896026 |
tgaatttgtgtatgatg |
10896042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 14 - 216
Target Start/End: Original strand, 12709893 - 12710095
Alignment:
| Q |
14 |
aaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatgttaatcctctta- |
112 |
Q |
| |
|
||||||||||| | ||||||||||| || ||||||||| ||||||||||||||||| |||| | ||||| |||| ||||||||||||||||| || || |
|
|
| T |
12709893 |
aaattgacctaattgcatagttttggaa-aataaattgagggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttg |
12709991 |
T |
|
| Q |
113 |
taatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgatt-gaaaattatgagtgattggatgaattgatgaatttgtgta |
211 |
Q |
| |
|
|||||||||||||||||| |||||||||||| ||||||||||||||| |||| ||||| | || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
12709992 |
taatataatgttcagaatataaacttaatctt-gttgttgctgtgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgta |
12710090 |
T |
|
| Q |
212 |
tgatg |
216 |
Q |
| |
|
||||| |
|
|
| T |
12710091 |
tgatg |
12710095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 14 - 216
Target Start/End: Original strand, 13122964 - 13123166
Alignment:
| Q |
14 |
aaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatgttaatcctctta- |
112 |
Q |
| |
|
||||||||||| | ||||||||||| || ||||||||| ||||||||||||||||| |||| | ||||| |||| ||||||||||||||||| || || |
|
|
| T |
13122964 |
aaattgacctaattgcatagttttggaa-aataaattgagggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttg |
13123062 |
T |
|
| Q |
113 |
taatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgatt-gaaaattatgagtgattggatgaattgatgaatttgtgta |
211 |
Q |
| |
|
|||||||||||||||||| |||||||||||| ||||||||||||||| |||| ||||| | || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
13123063 |
taatataatgttcagaatataaacttaatctt-gttgttgctgtgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgta |
13123161 |
T |
|
| Q |
212 |
tgatg |
216 |
Q |
| |
|
||||| |
|
|
| T |
13123162 |
tgatg |
13123166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 14423002 - 14422789
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagtttt-gaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcat |
99 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||| | |||| ||||||| ||||||||||||||||| |||||| | | |||||| ||| ||||||| |
|
|
| T |
14423002 |
ctataatttctgaaaattgacctaattgcatagtttttggaaga-taaattgagggttagggtttgatgatgattctgagg-ggaatgggtattgatcat |
14422905 |
T |
|
| Q |
100 |
gttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattga |
199 |
Q |
| |
|
|||||| || || |||| ||||||| |||||||||||||||||| | |||||| ||||||||||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
14422904 |
gttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcataaattgattg-aaattatgattgattggatgaattga |
14422806 |
T |
|
| Q |
200 |
tgaatttgtgtatgatg |
216 |
Q |
| |
|
|||| | ||||||||| |
|
|
| T |
14422805 |
tgaagatttgtatgatg |
14422789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 16009594 - 16009382
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
|||||||||||||||||||||||| | |||| |||||| |||| ||||||| |||||| |||||||||| |||||| | | |||||| ||| |||||||| |
|
|
| T |
16009594 |
ctataatttctgaaaattgacctaattgcatggttttggaaga-taaattgtgggttaaggtttgatgatgattctgagg-ggaatgggtattgatcatg |
16009497 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat |
200 |
Q |
| |
|
||||| || || |||| ||||||| |||||||||||||||||| | ||||| |||||||||||| |||||| ||||||||| ||||||||||||||||| |
|
|
| T |
16009496 |
ttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaactgattg-aaattatgattgattggatgaattgat |
16009398 |
T |
|
| Q |
201 |
gaatttgtgtatgatg |
216 |
Q |
| |
|
||| | ||||||||| |
|
|
| T |
16009397 |
gaagatttgtatgatg |
16009382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 14 - 204
Target Start/End: Complemental strand, 13743714 - 13743526
Alignment:
| Q |
14 |
aaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatgttaatcctcttat |
113 |
Q |
| |
|
||||||||||| | ||||||||||| || ||||||||| ||||||||||||||||| |||| | ||||| |||| ||||||||||||||||| |||| | |
|
|
| T |
13743714 |
aaattgacctaattgcatagttttggaa-aataaattgagggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattttcttgt |
13743616 |
T |
|
| Q |
114 |
aatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaat |
204 |
Q |
| |
|
| ||| |||||||| |||| ||||||||| |||| ||||||||||||||||||| ||| |||||||| || |||||| ||||||||||| |
|
|
| T |
13743615 |
attatgctgttcagattgaagacttaatctatgttattgctgtgatcataaattggttg-aaattatgcttggttggataaattgatgaat |
13743526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 16677313 - 16677152
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatag-ttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcat |
99 |
Q |
| |
|
||||||||||| |||||||||||| | |||||| ||||| |||| ||||| ||||||||||||||||| |||| | | ||||| | ||||||||||| |
|
|
| T |
16677313 |
ctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggtttgatgatgattttgaggaggatggtgtaatgatcat |
16677214 |
T |
|
| Q |
100 |
gttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatca |
161 |
Q |
| |
|
||||| | || ||| | |||||||||||||| | |||||| | |||||||||||||| |
|
|
| T |
16677213 |
gttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatca |
16677152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 17651549 - 17651388
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatag-ttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcat |
99 |
Q |
| |
|
||||||||||| |||||||||||| | |||||| ||||| |||| ||||| ||||||||||||||||| |||| | | ||||| | ||||||||||| |
|
|
| T |
17651549 |
ctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggtttgatgatgattttgaggaggatggtgtaatgatcat |
17651450 |
T |
|
| Q |
100 |
gttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatca |
161 |
Q |
| |
|
||||| | || ||| | |||||||||||||| | |||||| | |||||||||||||| |
|
|
| T |
17651449 |
gttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatca |
17651388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 12590681 - 12590851
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
||||||||||||||| |||||||| | | ||||||||| || ||||| || ||||||||||||||| |||||| | | |||||||||| ||| ||| |
|
|
| T |
12590681 |
ctataatttctgaaa-ttgacctaattgaatagttttggaa-aataatatgaaagttagggtttgatgatgattctgatg--gaatgagtaaagatgatg |
12590776 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgat-cataaattgattgaa |
174 |
Q |
| |
|
||| | |||| ||| ||||||| ||||||||| ||||||| |||||||||||| || ||| ||||||||||| |
|
|
| T |
12590777 |
ttagttttcttggaatttaatgttaagaatgaaagcttaatccatgttgttgctgtaatccattaattgattgaa |
12590851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 160; Significance: 2e-85; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 22751159 - 22750945
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| |||| ||||||| ||||||||||||||||| |||||| ||| | |||| |||||||||||| |
|
|
| T |
22751159 |
ctataatttctgaaaattgacctaattgcatagttttggaaga-taaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatg |
22751061 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat |
200 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22751060 |
ttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat |
22750961 |
T |
|
| Q |
201 |
gaatttgtgtatgatg |
216 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
22750960 |
gaatttgtgtatgatg |
22750945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 38144574 - 38144786
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||| ||||| || ||||||||| ||||||||||||||||| |||||| | | |||||| ||| |||||||| |
|
|
| T |
38144574 |
ctataatttctgaaaattgacctaattgcataattttggaa-aataaattgagggttagggtttgatgatgattctgagg-ggaatgggtattgatcatg |
38144671 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat |
200 |
Q |
| |
|
||||| || || |||| ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||| |||||| || ||||||||||||||||| |
|
|
| T |
38144672 |
ttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaattgattg-aaattacgattgattggatgaattgat |
38144770 |
T |
|
| Q |
201 |
gaatttgtgtatgatg |
216 |
Q |
| |
|
||| | ||||||||| |
|
|
| T |
38144771 |
gaagatttgtatgatg |
38144786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 28370092 - 28370304
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| || ||||||||| ||||||||||||||||| |||| | | | |||||| ||| |||||||| |
|
|
| T |
28370092 |
ctataatttctgaaaattgacctaattgcatagttttggaa-aataaattgagggttagggtttgatgatgattttgagg-ggaatgggtattgatcatg |
28370189 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat |
200 |
Q |
| |
|
||||| || || ||| ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||| ||||||||| |||| |||||||||||| |
|
|
| T |
28370190 |
ttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaattgattg-aaattatgattgatgggatgaattgat |
28370288 |
T |
|
| Q |
201 |
gaatttgtgtatgatg |
216 |
Q |
| |
|
||| | ||||||||| |
|
|
| T |
28370289 |
gaagatttgtatgatg |
28370304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 19512404 - 19512191
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagtttt-gaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcat |
99 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||| | |||| ||||||| ||||||||||||||||| |||| | | | |||||| ||| ||||||| |
|
|
| T |
19512404 |
ctataatttctgaaaattgacctaattgcatagtttttggaaga-taaattgagggttagggtttgatgatgattttgagg-ggaatgggtattgatcat |
19512307 |
T |
|
| Q |
100 |
gttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattga |
199 |
Q |
| |
|
|||||| || || ||| ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
19512306 |
gttaattctattgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaattgattg-aaattatgattgattggatgaattga |
19512208 |
T |
|
| Q |
200 |
tgaatttgtgtatgatg |
216 |
Q |
| |
|
|||| | ||||||||| |
|
|
| T |
19512207 |
tgaagatttgtatgatg |
19512191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 23528648 - 23528478
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
||||||||||||||| |||||||| | | ||||||||| || ||||| || ||||||||||||||| |||||| | | |||||||||| ||| ||| |
|
|
| T |
23528648 |
ctataatttctgaaa-ttgacctaattgaatagttttggaa-aataagatgaaagttagggtttgatgatgattctgatg--gaatgagtaaggatgatg |
23528553 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgat-cataaattgattgaa |
174 |
Q |
| |
|
||| | |||| ||| ||||||| |||| |||| ||||||| |||||||||||| || ||| ||||||||||| |
|
|
| T |
23528552 |
ttagttttcttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgtaatccatgaattgattgaa |
23528478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 160; Significance: 2e-85; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 14762795 - 14763009
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| |||| ||||||| ||||||||||||||||| |||||| ||| | |||| |||||||||||| |
|
|
| T |
14762795 |
ctataatttctgaaaattgacctaattgcatagttttggaaga-taaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatg |
14762893 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat |
200 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14762894 |
ttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat |
14762993 |
T |
|
| Q |
201 |
gaatttgtgtatgatg |
216 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
14762994 |
gaatttgtgtatgatg |
14763009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 38310837 - 38311049
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
|||||||||||||| ||||||||| | ||||||||||| |||| ||||||| ||||||||||||||||| |||||| ||| | |||| |||||||||||| |
|
|
| T |
38310837 |
ctataatttctgaatattgacctaattgcatagttttggaaga-taaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatg |
38310935 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat |
200 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
38310936 |
ttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaattgattgaaaattatgagtgattggatgaatggat |
38311035 |
T |
|
| Q |
201 |
gaatttgtgtatga |
214 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
38311036 |
gaatttgtgtatga |
38311049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 20247826 - 20248021
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| |||| ||||||| ||||||||||||||||| |||||| ||| | |||| |||||||||||| |
|
|
| T |
20247826 |
ctataatttctgaaaattgacctaattgcatagttttggaaga-taaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatg |
20247924 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaatt |
197 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20247925 |
ttaattttcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaattgattgaaaattatgagtgattggatgaatt |
20248021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 9534345 - 9534133
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| || ||||||||| ||||||||||||||||| |||||| | | |||||| ||| |||||||| |
|
|
| T |
9534345 |
ctataatttctgaaaattgacctaattgcatagttttggaa-aataaattgagggttagggtttgatgatgattctga-gtggaatgggtattgatcatg |
9534248 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat |
200 |
Q |
| |
|
||||| || || |||| ||||||| |||||||||||||||||| | ||||| |||||||||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
9534247 |
ttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgtcgtgatcataaattgattg-aaattatgattgattggatgaattgat |
9534149 |
T |
|
| Q |
201 |
gaatttgtgtatgatg |
216 |
Q |
| |
|
||| | ||||||||| |
|
|
| T |
9534148 |
gaagatttgtatgatg |
9534133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 24192974 - 24192771
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagtttt-gaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcat |
99 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||| | |||| ||||||| ||||||||||||||||| |||||| ||| | |||| ||||||||||| |
|
|
| T |
24192974 |
ctataatttctgaaaattgacctaattgcatagtttttggaaga-taaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcat |
24192876 |
T |
|
| Q |
100 |
gttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtg-atcataaattgattgaaaattatgagtgattggatgaattg |
198 |
Q |
| |
|
|||||| || || |||| | |||||||||||||||||||||||| || |||||||||| |||||||| |||||||||| ||||| ||||||||| ||||| |
|
|
| T |
24192875 |
gttaattctgttgtaatgtgatgttcagaatgaaaacttaatctatgctgttgctgtgaatcataaactgattgaaaa-tatgattgattggataaattg |
24192777 |
T |
|
| Q |
199 |
atgaat |
204 |
Q |
| |
|
|||||| |
|
|
| T |
24192776 |
atgaat |
24192771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 23370543 - 23370756
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagtttt-gaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcat |
99 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||| | |||| ||||||| ||||||||||||||||| |||||| | | |||||| ||| ||||||| |
|
|
| T |
23370543 |
ctataatttctgaaaattgacctaattgcatagtttttggaaga-taaattgtgggttagggtttgatgatgattctgagg-ggaatgggtattgatcat |
23370640 |
T |
|
| Q |
100 |
gttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattga |
199 |
Q |
| |
|
|||||| || || |||| ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
23370641 |
gttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaattgattg-aaattatgattgattggatgaattga |
23370739 |
T |
|
| Q |
200 |
tgaatttgtgtatgatg |
216 |
Q |
| |
|
|||| | ||||||||| |
|
|
| T |
23370740 |
tgaagatttgtatgatg |
23370756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 55499185 - 55499353
Alignment:
| Q |
46 |
aaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatcttt |
145 |
Q |
| |
|
|||||| ||||||||||||||||| |||||| | | |||||| ||||||||||||||||| | || |||| | |||||| |||||||| |||||||| | |
|
|
| T |
55499185 |
aaattgagggttagggtttgatgatgattctgagg-ggaatgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctat |
55499283 |
T |
|
| Q |
146 |
gttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg |
216 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| | ||||||||||||||||| || || ||||||||| |
|
|
| T |
55499284 |
acagttgctgtgatcataaattgattgaaaa-tataattgattggatgaattgatcaagttttgtatgatg |
55499353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 148; Significance: 3e-78; HSPs: 2)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 11888 - 12102
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| || ||||||||| | ||||||||||||||| |||||| ||| | |||| |||||||||||| |
|
|
| T |
11888 |
ctataatttctgaaaattgacctaattgcatagttttggaa-aataaattgagagttagggtttgatgatgattctgaagggaaatgggtaatgatcatg |
11986 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat |
200 |
Q |
| |
|
||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
|
|
| T |
11987 |
ttaattctcttgtaatataatcttcagaatgaaaacttaatctttgttgttgctgtgatcataagttgattgaaatttatgagtgattggatgaattgat |
12086 |
T |
|
| Q |
201 |
gaatttgtgtatgatg |
216 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
12087 |
gaatttgtgtatgatg |
12102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 111703 - 111491
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| || ||||||||| ||||||||||||||||| |||||| | | |||||| ||| |||||||| |
|
|
| T |
111703 |
ctataatttctgaaaattgacctaattgcatagttttggaa-aataaattgagggttagggtttgatgatgattctgagg-ggaatgggtattgatcatg |
111606 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat |
200 |
Q |
| |
|
||||| || || |||| ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
111605 |
ttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaattgattg-aaattatgattgattggatgaattgat |
111507 |
T |
|
| Q |
201 |
gaatttgtgtatgatg |
216 |
Q |
| |
|
||| | ||||||||| |
|
|
| T |
111506 |
gaagatttgtatgatg |
111491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 138; Significance: 3e-72; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 23057956 - 23057760
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
|||||||| ||||||||||||||| | ||||||||||| |||| ||||||| ||||||||||||||||| |||||| ||| | |||| |||||||||||| |
|
|
| T |
23057956 |
ctataattcctgaaaattgacctaattgcatagttttggaaga-taaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatg |
23057858 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattg |
198 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23057857 |
ttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaattgattgaaaattatgagtgattggatgaattg |
23057760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 29614184 - 29614398
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||| || ||||||||| ||||||||||||||||| |||| | ||| | |||| |||||||||||| |
|
|
| T |
29614184 |
ctataatttctgaaaattgacctagttgcataattttggaaaaataaattgagggttagggtttgatgatgattatgaagggaaatgggtaatgatcatg |
29614283 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat |
200 |
Q |
| |
|
||||| ||||| || | |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||| |
|
|
| T |
29614284 |
ttaattctcttgtattg-aatgtttagaatgaaaacttaatctttgttgttgctgtgatcataacttgattgaaatttatgaatgattggatgaattgat |
29614382 |
T |
|
| Q |
201 |
gaatttgtgtatgatg |
216 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
29614383 |
gaatttgtgtatgatg |
29614398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 23839216 - 23839003
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagt-tttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcat |
99 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||| |||| |||| ||||||| ||||||||||||||||| |||||||| | |||||| ||| ||||||| |
|
|
| T |
23839216 |
ctataatttctgaaaattgacctaattgcatagtgtttggaaga-taaattgagggttagggtttgatgatgattctaagg-ggaatgggtattgatcat |
23839119 |
T |
|
| Q |
100 |
gttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattga |
199 |
Q |
| |
|
|||||| || || |||| |||||||||||||||||||||||||| | ||||| ||||||||||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
23839118 |
gttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcataaattgattg-aaattatgattgattggatgaattga |
23839020 |
T |
|
| Q |
200 |
tgaatttgtgtatgatg |
216 |
Q |
| |
|
|||| | ||||||||| |
|
|
| T |
23839019 |
tgaagatttgtatgatg |
23839003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 10986218 - 10986431
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagtttt-gaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcat |
99 |
Q |
| |
|
||||||||||| |||||||||||| | |||||||||| | |||| ||||||| ||||||||||||||||| |||||| | | |||||| ||| ||||||| |
|
|
| T |
10986218 |
ctataatttctaaaaattgacctaattgcatagtttttggaaga-taaattgagggttagggtttgatgatgattctgagg-ggaatgggtattgatcat |
10986315 |
T |
|
| Q |
100 |
gttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattga |
199 |
Q |
| |
|
|||||| || || |||| |||||||||||||||||||||||||| | ||||| ||||||||||||||||||| |||||| || |||||||||||||||| |
|
|
| T |
10986316 |
gttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcataaattgattg-aaattacgattgattggatgaattga |
10986414 |
T |
|
| Q |
200 |
tgaatttgtgtatgatg |
216 |
Q |
| |
|
|||| | ||||||||| |
|
|
| T |
10986415 |
tgaagatttgtatgatg |
10986431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 4477875 - 4477678
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagtttt-gaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcat |
99 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||| | |||| ||||||| ||||||||||||||||| |||||| | | |||||| ||| ||||||| |
|
|
| T |
4477875 |
ctataatttctgaaaattgacctaattgcatagtttttggaaga-taaattgtgggttagggtttgatgatgattctgagg-ggaatgggtattgatcat |
4477778 |
T |
|
| Q |
100 |
gttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattga |
199 |
Q |
| |
|
| |||| || || |||| ||||||| |||||||||||||||||| | |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| |
|
|
| T |
4477777 |
gctaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcataaattgattg-aaattatgattgattggatgatttga |
4477679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 18800455 - 18800242
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaata-aattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcat |
99 |
Q |
| |
|
|||||||||||||||||||||||| | || |||||||| || |||| ||||| ||||||||||||||||| |||||| || |||||||||||||||||| |
|
|
| T |
18800455 |
ctataatttctgaaaattgacctaattgcttagttttggaa-aatagaattgagggttagggtttgatgatgattctggag-ggaatgagtaatgatcat |
18800358 |
T |
|
| Q |
100 |
gttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattga |
199 |
Q |
| |
|
|||||| || || |||| | ||||||| ||||||| |||||||| | |||||| |||||||| |||||||||||||| ||| | |||||||||||||||| |
|
|
| T |
18800357 |
gttaattctgttgtaatgtgatgttcaaaatgaaatcttaatctatattgttgttgtgatcacaaattgattgaaaa-tataattgattggatgaattga |
18800259 |
T |
|
| Q |
200 |
tgaatttgtgtatgatg |
216 |
Q |
| |
|
|||| || |||||||| |
|
|
| T |
18800258 |
tgaagtttggtatgatg |
18800242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 21565294 - 21565462
Alignment:
| Q |
46 |
aaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatcttt |
145 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||| | |||||| ||||||||||||||||| | || |||| | | |||| |||||||| |||||||| | |
|
|
| T |
21565294 |
aaattgagggttagggtttgatgatgattctaagg-ggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctat |
21565392 |
T |
|
| Q |
146 |
gttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg |
216 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| | |||||||||||||||||||| || ||||||||| |
|
|
| T |
21565393 |
actgttgctgtgatcataaattgattgaaaa-tataattgattggatgaattgatgaagttctgtatgatg |
21565462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 930133 - 930229
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcat |
99 |
Q |
| |
|
||||| |||||||||||||||||| | | |||||||||||| ||||||||| ||||||||||||||||| | |||| ||| |||||| ||||||||||| |
|
|
| T |
930133 |
ctatagtttctgaaaattgacctaattgtatagttttgaaa-aataaattgagggttagggtttgatgatgtttctgaag-ggaatgggtaatgatcat |
930229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 19785907 - 19786076
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
||||||||||||||| |||||||||| | ||||||||| || |||||| || ||||||||||||||| |||||| | | |||||||||| ||| ||| |
|
|
| T |
19785907 |
ctataatttctgaaa-ttgacctagttgaatagttttggaa-aataaaatgaaagttagggtttgatgatgattctgatg--gaatgagtaaagatgatg |
19786002 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgat-cataaattgattgaa |
174 |
Q |
| |
|
||| | |||| ||| ||||||| |||| |||| ||||||| |||||||||||| || ||| ||||||||||| |
|
|
| T |
19786003 |
ttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgtaatccatgaattgattgaa |
19786076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1773 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: scaffold1773
Description:
Target: scaffold1773; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 1195 - 983
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
|||||||| |||||| |||||||| | ||||||||||| || ||||||||| ||||||||||||||||| |||| | ||| | |||| |||||||||||| |
|
|
| T |
1195 |
ctataattcctgaaa-ttgacctaattgcatagttttggaa-aataaattgagggttagggtttgatgaggattatgaagggaaatgggtaatgatcatg |
1098 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat |
200 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
1097 |
ttaattctcttgtaatataatgttcagaatgaaaacttaatctt-gttgttgctgtgatcataaattgattgaaatttatgagtgattggatgaattgat |
999 |
T |
|
| Q |
201 |
gaatttgtgtatgatg |
216 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
998 |
gaatttgtgtatgatg |
983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 50196 - 49984
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
|||||||| |||||| |||||||| | ||||||||||| || ||||||||| ||||||||||||||||| |||| | ||| | |||| |||||||||||| |
|
|
| T |
50196 |
ctataattcctgaaa-ttgacctaattgcatagttttggaa-aataaattgagggttagggtttgatgaggattatgaagggaaatgggtaatgatcatg |
50099 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat |
200 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
50098 |
ttaattctcttgtaatataatgttcagaatgaaaacttaatctt-gttgttgctgtgatcataaattgattgaaatttatgagtgattggatgaattgat |
50000 |
T |
|
| Q |
201 |
gaatttgtgtatgatg |
216 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
49999 |
gaatttgtgtatgatg |
49984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0924 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0924
Description:
Target: scaffold0924; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 788 - 1002
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||| | ||||||||| ||||||||||||||||| |||| | ||| | |||| |||||||||||| |
|
|
| T |
788 |
ctataatttctgaaaattgacctaattgcatagtttttggaaaataaattgagggttagggtttgatgaggattatgaagggaaatgggtaatgatcatg |
887 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat |
200 |
Q |
| |
|
|||| ||||| ||||||||||||||| || ||||||||||| ||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
888 |
ataatactcttgtaatataatgttcaggataaaaacttaatc-ttgttgttgatgtgatcataaactgattgaaatttatgagtgattggatgaattgat |
986 |
T |
|
| Q |
201 |
gaatttgtgtatgatg |
216 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
987 |
gaatttgtgtatgatg |
1002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 117; Significance: 9e-60; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 8727770 - 8727984
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagtttt-gaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcat |
99 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||| | |||| ||||||| |||||||||||||| || |||||| | | || ||| ||| ||||||| |
|
|
| T |
8727770 |
ctataatttctgaaaattgacctaattgcatagtttttggaaga-taaattgagggttagggtttgacgatgattctgagg-ggtatgggtattgatcat |
8727867 |
T |
|
| Q |
100 |
gttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattga |
199 |
Q |
| |
|
|||||| || || |||| |||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8727868 |
gttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcataaattgattgaaaattatgagtgattggatgaattga |
8727967 |
T |
|
| Q |
200 |
tgaatttgtgtatgatg |
216 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
8727968 |
tgaatttgtgtatgatg |
8727984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 14 - 216
Target Start/End: Complemental strand, 23866620 - 23866418
Alignment:
| Q |
14 |
aaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatgttaatcctctta- |
112 |
Q |
| |
|
||||||||||| | ||||||||||| || ||||||||| ||||||||||||||||| |||| | ||||| |||| ||||||||||||||||| || || |
|
|
| T |
23866620 |
aaattgacctaattgcatagttttggaa-aataaattgagggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttg |
23866522 |
T |
|
| Q |
113 |
taatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgatt-gaaaattatgagtgattggatgaattgatgaatttgtgta |
211 |
Q |
| |
|
|||||||||||||||||| |||||||||||| ||||||||| ||||| |||| ||||| | || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
23866521 |
taatataatgttcagaatataaacttaatctt-gttgttgctctgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgta |
23866423 |
T |
|
| Q |
212 |
tgatg |
216 |
Q |
| |
|
||||| |
|
|
| T |
23866422 |
tgatg |
23866418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 44477640 - 44477428
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| || ||||||||| ||||||||||||||||| |||| | | | |||||| ||| |||||||| |
|
|
| T |
44477640 |
ctataatttctgaaaattgacctaattgcatagttttggaa-aataaattgagggttagggtttgatgatgattttgagg-ggaatgggtattgatcatg |
44477543 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat |
200 |
Q |
| |
|
||||| || || ||| ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
44477542 |
ttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaattgattg-aaattatgattgattggatgaattgat |
44477444 |
T |
|
| Q |
201 |
gaatttgtgtatgatg |
216 |
Q |
| |
|
||| | ||||||||| |
|
|
| T |
44477443 |
gaagatttgtatgatg |
44477428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 44492798 - 44492586
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| || ||||||||| ||||||||||||||||| |||| | | | |||||| ||| |||||||| |
|
|
| T |
44492798 |
ctataatttctgaaaattgacctaattgcatagttttggaa-aataaattgagggttagggtttgatgatgattttgagg-ggaatgggtattgatcatg |
44492701 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat |
200 |
Q |
| |
|
||||| || || ||| ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
44492700 |
ttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaattgattg-aaattatgattgattggatgaattgat |
44492602 |
T |
|
| Q |
201 |
gaatttgtgtatgatg |
216 |
Q |
| |
|
||| | ||||||||| |
|
|
| T |
44492601 |
gaagatttgtatgatg |
44492586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 216
Target Start/End: Original strand, 27940937 - 27941104
Alignment:
| Q |
47 |
aattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttg |
146 |
Q |
| |
|
||||||| |||||||||||||| |||||| | | |||||| ||| ||||||||||||| || || |||| |||||||||||||||||| ||||||| | |
|
|
| T |
27940937 |
aattgggaattagggtttgatgatgattctgagg-ggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaatttaatctata |
27941035 |
T |
|
| Q |
147 |
ttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg |
216 |
Q |
| |
|
||||| | ||||||||||||||||| ||||||||| |||||||||||||||||||| | ||||||||| |
|
|
| T |
27941036 |
ctgttgttatgatcataaattgattg-aaattatgattgattggatgaattgatgaagatttgtatgatg |
27941104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 112; Significance: 8e-57; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 111900 - 111726
Alignment:
| Q |
1 |
ctataatttctgaaaa-ttgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcat |
99 |
Q |
| |
|
|||||||||||||||| |||||||| | ||||||||||| |||| ||||||| ||||||||||||||||| |||||| ||| | |||| ||||||||||| |
|
|
| T |
111900 |
ctataatttctgaaaaattgacctaattgcatagttttggaaga-taaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcat |
111802 |
T |
|
| Q |
100 |
gttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaa |
175 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
111801 |
gttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaattgattgaaa |
111726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 108; Significance: 2e-54; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 19661491 - 19661703
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| |||| ||||||| ||||||||||||||||| |||||| | | |||||| ||| |||||||| |
|
|
| T |
19661491 |
ctataatttctgaaaattgacctaattgcatagttttggaaga-taaattgagggttagggtttgatgatgattctgagg-ggaatgggtattgatcatg |
19661588 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat |
200 |
Q |
| |
|
||||| || || |||| ||||||| |||||||||||||||||| | |||||| ||||||||||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
19661589 |
ttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcataaattgattg-aaattatgattgattggatgaattgat |
19661687 |
T |
|
| Q |
201 |
gaatttgtgtatgatg |
216 |
Q |
| |
|
||| | ||||||||| |
|
|
| T |
19661688 |
gaagatttgtatgatg |
19661703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 6483735 - 6483523
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| || ||||||||| ||||||||||||||||| |||| | | | |||||| ||| |||||||| |
|
|
| T |
6483735 |
ctataatttctgaaaattgacctaattgcatagttttggaa-aataaattgagggttagggtttgatgatgattttgagg-ggaatgggtattgatcatg |
6483638 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat |
200 |
Q |
| |
|
||||| || || ||| ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||| ||||||||| |||| |||||||||||| |
|
|
| T |
6483637 |
ttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaattgattg-aaattatgattgatgggatgaattgat |
6483539 |
T |
|
| Q |
201 |
gaatttgtgtatgatg |
216 |
Q |
| |
|
||| | ||||||||| |
|
|
| T |
6483538 |
gaagatttgtatgatg |
6483523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 6487202 - 6486990
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| || ||||||||| ||||||||||||||||| |||| | | | |||||| ||| |||||||| |
|
|
| T |
6487202 |
ctataatttctgaaaattgacctaattgcatagttttggaa-aataaattgagggttagggtttgatgatgattttgagg-ggaatgggtattgatcatg |
6487105 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat |
200 |
Q |
| |
|
||||| || || ||| ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||| ||||||||| |||| |||||||||||| |
|
|
| T |
6487104 |
ttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaattgattg-aaattatgattgatgggatgaattgat |
6487006 |
T |
|
| Q |
201 |
gaatttgtgtatgatg |
216 |
Q |
| |
|
||| | ||||||||| |
|
|
| T |
6487005 |
gaagatttgtatgatg |
6486990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 23089137 - 23089305
Alignment:
| Q |
46 |
aaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatcttt |
145 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||| | |||||| ||||||||||||||||| | || |||| | | |||| |||||||| |||||||| | |
|
|
| T |
23089137 |
aaattgagggttagggtttgatgatgattctaagg-ggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctat |
23089235 |
T |
|
| Q |
146 |
gttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg |
216 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| | |||||||||||||||||||| || ||||||||| |
|
|
| T |
23089236 |
actgttgctgtgatcataaattgattgaaaa-tataattgattggatgaattgatgaagttctgtatgatg |
23089305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 23101545 - 23101713
Alignment:
| Q |
46 |
aaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatcttt |
145 |
Q |
| |
|
|||||| ||||||||||||||||| |||||| | | |||||| ||||||||||||||||| | || |||| | | |||| |||||||| |||||||| | |
|
|
| T |
23101545 |
aaattgagggttagggtttgatgatgattctgagg-ggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctat |
23101643 |
T |
|
| Q |
146 |
gttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg |
216 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||| | |||||||||||||| ||||| || ||||||||| |
|
|
| T |
23101644 |
actgttgttgtgatcataaattgattgaaaa-tataattgattggatgaattcatgaagttctgtatgatg |
23101713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 89 - 216
Target Start/End: Complemental strand, 23878939 - 23878813
Alignment:
| Q |
89 |
gtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgatt |
188 |
Q |
| |
|
||||||||||||||||| | || |||| | ||||||||||||||| |||||||| | ||||| ||||||||||||||||||||||| || | ||||| |
|
|
| T |
23878939 |
gtaatgatcatgttaattatgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgttgtgatcataaattgattgaaaa-tagaattgatt |
23878841 |
T |
|
| Q |
189 |
ggatgaattgatgaatttgtgtatgatg |
216 |
Q |
| |
|
||||||||||||||| || ||||||||| |
|
|
| T |
23878840 |
ggatgaattgatgaagttttgtatgatg |
23878813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 26583844 - 26583632
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
||||||||||||||| |||||||| | ||||||||||| || ||||||||| ||||||||| ||||||| |||||| || |||| | |||||||||||| |
|
|
| T |
26583844 |
ctataatttctgaaa-ttgacctaattgcatagttttggaa-aataaattgagggttagggcttgatgatgattct-gaggggaaagggtaatgatcatg |
26583748 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat |
200 |
Q |
| |
|
|||| | || ||| | |||||||||||||| | |||||| | |||||||||||||| || |||| | ||||| | || |||||||||||| | |
|
|
| T |
26583747 |
ttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatcacaatttgaattgtaattagaattggttggatgaattggt |
26583648 |
T |
|
| Q |
201 |
gaatttgtgtatgatg |
216 |
Q |
| |
|
||| || ||||||||| |
|
|
| T |
26583647 |
gaaattttgtatgatg |
26583632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0117 (Bit Score: 102; Significance: 8e-51; HSPs: 2)
Name: scaffold0117
Description:
Target: scaffold0117; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 1935 - 2148
Alignment:
| Q |
1 |
ctataatttctgaaaa-ttgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcat |
99 |
Q |
| |
|
|||||||||||||||| |||||||| | | ||||||||| || ||||| ||| ||||||||||||||||| |||| | | |||||| |||||||| || |
|
|
| T |
1935 |
ctataatttctgaaaaattgacctaattgtatagttttggaa-aataatttgagggttagggtttgatgatgattttga--tggaatgggtaatgattat |
2031 |
T |
|
| Q |
100 |
gttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattga |
199 |
Q |
| |
|
|||||| ||||| |||| ||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||| | ||||||||||| ||||||||| |
|
|
| T |
2032 |
gttaattctcttgtaatttaatgttcataatgaaaacttaatccttgttgttgctgtgatcataacttgattgaaattgatgagtgattgtatgaattga |
2131 |
T |
|
| Q |
200 |
tgaatttgtgtatgatg |
216 |
Q |
| |
|
|||||||||||| |||| |
|
|
| T |
2132 |
tgaatttgtgtacgatg |
2148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0117; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 8612 - 8825
Alignment:
| Q |
1 |
ctataatttctgaaaa-ttgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcat |
99 |
Q |
| |
|
|||||||||||||||| |||||||| | | ||||||||| || ||||| ||| ||||||||||||||||| |||| | | |||||| |||||||| || |
|
|
| T |
8612 |
ctataatttctgaaaaattgacctaattgtatagttttggaa-aataatttgagggttagggtttgatgatgattatga--tggaatgggtaatgattat |
8708 |
T |
|
| Q |
100 |
gttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattga |
199 |
Q |
| |
|
|||||| ||||| |||| ||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||| | || |||||||| ||||||||| |
|
|
| T |
8709 |
gttaattctcttgtaatttaatgttcaaaatgaaaacttaatccttgttgttgctgtgatcataacttgattgaaattgataagtgattgtatgaattga |
8808 |
T |
|
| Q |
200 |
tgaatttgtgtatgatg |
216 |
Q |
| |
|
|||||||||||| |||| |
|
|
| T |
8809 |
tgaatttgtgtacgatg |
8825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0025 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0025
Description:
Target: scaffold0025; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 14433 - 14635
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagtttt-gaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcat |
99 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||| | |||| ||||||| ||||||||||||||||| |||||| ||| | |||| ||||||||||| |
|
|
| T |
14433 |
ctataatttctgaaaattgacctaattgcatagtttttggaaga-taaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcat |
14531 |
T |
|
| Q |
100 |
gttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattga |
199 |
Q |
| |
|
|||||| || || |||| | |||||| ||||||||||||||||| || |||||||||||||||||| |||||||||| ||||| ||||||||| |||||| |
|
|
| T |
14532 |
gttaattctgttgtaatgtgatgttccgaatgaaaacttaatctatgctgttgctgtgatcataaactgattgaaaa-tatgattgattggataaattga |
14630 |
T |
|
| Q |
200 |
tgaat |
204 |
Q |
| |
|
||||| |
|
|
| T |
14631 |
tgaat |
14635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0553 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0553
Description:
Target: scaffold0553; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 10233 - 10446
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagtttt-gaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcat |
99 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||| | |||| ||||||| ||||||||||||||||| |||||| | | |||||| ||| ||||||| |
|
|
| T |
10233 |
ctataatttctgaaaattgacctaattgcatagtttttggaaga-taaattgtgggttagggtttgatgatgattctgagg-ggaatgggtattgatcat |
10330 |
T |
|
| Q |
100 |
gttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattga |
199 |
Q |
| |
|
|||||| || || |||| ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
10331 |
gttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaattgattg-aaattatgattgattggatgaattga |
10429 |
T |
|
| Q |
200 |
tgaatttgtgtatgatg |
216 |
Q |
| |
|
|||| | ||||||||| |
|
|
| T |
10430 |
tgaagatttgtatgatg |
10446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0544 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0544
Description:
Target: scaffold0544; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 1563 - 1776
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagtttt-gaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcat |
99 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||| | |||| ||||||| ||||||||||||||||| |||||| | | |||||| ||| ||||||| |
|
|
| T |
1563 |
ctataatttctgaaaattgacctaattgcatagtttttggaaga-taaattgtgggttagggtttgatgatgattctgagg-ggaatgggtattgatcat |
1660 |
T |
|
| Q |
100 |
gttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattga |
199 |
Q |
| |
|
|||||| || || |||| ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
1661 |
gttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaattgattg-aaattatgattgattggatgaattga |
1759 |
T |
|
| Q |
200 |
tgaatttgtgtatgatg |
216 |
Q |
| |
|
|||| | ||||||||| |
|
|
| T |
1760 |
tgaagatttgtatgatg |
1776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 20437061 - 20437274
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagtttt-gaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcat |
99 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||| | |||| ||||||| ||||||||||||||||| |||||| | | |||||| ||| ||||||| |
|
|
| T |
20437061 |
ctataatttctgaaaattgacctaattgcatagtttttggaaga-taaattgagggttagggtttgatgatgattctgagg-ggaatgggtattgatcat |
20437158 |
T |
|
| Q |
100 |
gttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattga |
199 |
Q |
| |
|
|||||| | || |||| |||||||||||||||||||||||||| | ||||| ||||||||||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
20437159 |
gttaattatgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcataaattgattg-aaattatgattgattggatgaattga |
20437257 |
T |
|
| Q |
200 |
tgaatttgtgtatgatg |
216 |
Q |
| |
|
|||| | ||||||||| |
|
|
| T |
20437258 |
tgaagatttgtatgatg |
20437274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0247 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0247
Description:
Target: scaffold0247; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 11359 - 11146
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaata-aattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcat |
99 |
Q |
| |
|
|||||||||||||||||||||||| | || |||||||| || |||| ||||| ||||||||||||||||| |||||| || |||||||||||||||||| |
|
|
| T |
11359 |
ctataatttctgaaaattgacctaattgcttagttttggaa-aatagaattgagggttagggtttgatgatgattctggag-ggaatgagtaatgatcat |
11262 |
T |
|
| Q |
100 |
gttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattga |
199 |
Q |
| |
|
|||||| || || |||| | ||||||| ||||||| ||||||| | |||||||||||||| |||||||||||||| ||| | |||||||||||||||| |
|
|
| T |
11261 |
gttaattctgttgtaatgtgatgttcaaaatgaaatcttaatccatactgttgctgtgatcacaaattgattgaaaa-tataattgattggatgaattga |
11163 |
T |
|
| Q |
200 |
tgaatttgtgtatgatg |
216 |
Q |
| |
|
|||| || ||||||||| |
|
|
| T |
11162 |
tgaagttttgtatgatg |
11146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0634 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0634
Description:
Target: scaffold0634; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 124 - 216
Target Start/End: Complemental strand, 3558 - 3466
Alignment:
| Q |
124 |
tcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
3558 |
tcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaatttatgggtgattggatgaattgatgaatttgtgtatgatg |
3466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0058 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0058
Description:
Target: scaffold0058; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 308 - 109
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
||||||||||||||| |||||||| | ||||||||||| || ||||||||| ||||||||||||||||| |||||| | | |||||| |||||||||||| |
|
|
| T |
308 |
ctataatttctgaaa-ttgacctaattgcatagttttggaa-aataaattgagggttagggtttgatgatgattctgagg-ggaatgggtaatgatcatg |
212 |
T |
|
| Q |
101 |
ttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat |
200 |
Q |
| |
|
||||| |||| || ||| |||||||| |||| ||||||||| |||| ||| ||||||||||||||| ||| ||||||||| || |||||| ||||||| |
|
|
| T |
211 |
ttaattttcttgtattatggtgttcagattgaagacttaatctatgttattgatgtgatcataaattggttg-aaattatgattggttggataaattgat |
113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0476 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0476
Description:
Target: scaffold0476; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 3375 - 3544
Alignment:
| Q |
46 |
aaattgggggttagggtttgatgacgattctaaagaggaatgagtaatga-tcatgttaatcctcttataatataatgttcagaatgaaaacttaatctt |
144 |
Q |
| |
|
|||||| ||||||||||||||||| |||||| | | |||||| ||||||| |||||||||| | || |||| | ||||||||||||||| |||||||| |
|
|
| T |
3375 |
aaattgagggttagggtttgatgatgattctgagg-ggaatgggtaatgaatcatgttaattttgttgtaatgtgatgttcagaatgaaatcttaatcta |
3473 |
T |
|
| Q |
145 |
tgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg |
216 |
Q |
| |
|
| |||||||||||||| |||||||||||||| ||| | |||||||||||||||||||| || ||||||||| |
|
|
| T |
3474 |
tactgttgctgtgatcacaaattgattgaaaa-tataattgattggatgaattgatgaagttttgtatgatg |
3544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0077 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0077
Description:
Target: scaffold0077; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 3704 - 3872
Alignment:
| Q |
46 |
aaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatcttt |
145 |
Q |
| |
|
|||||| ||||||||||||||||| |||||| | | ||| || ||||||||||||||||| | || |||| | |||||| |||||||| |||||||| | |
|
|
| T |
3704 |
aaattgagggttagggtttgatgatgattctgaggggga-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctat |
3802 |
T |
|
| Q |
146 |
gttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg |
216 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||| | |||||||||||||||||||| || ||||||||| |
|
|
| T |
3803 |
actgttgttgtgatcataaattgattgaaaa-tataattgattggatgaattgatgaagttttgtatgatg |
3872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0090 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0090
Description:
Target: scaffold0090; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 18187 - 17973
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgattctaaagaggaatgagtaatgatcatg |
100 |
Q |
| |
|
||||||||| |||||||||||||| | || ||| ||| | ||||||||| |||||| ||||| |||| |||||||| | | |||| |||||| ||||| |
|
|
| T |
18187 |
ctataatttttgaaaattgacctaattgcttagctttaggaaaataaattgagggttaaggtttaatgatgattctaacgggaaatg-gtaatggtcatg |
18089 |
T |
|
| Q |
101 |
ttaatcctctta-taatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattga |
199 |
Q |
| |
|
||||| || || |||| | |||| |||||||||||||||| || |||||||||||||||||| ||||||||| ||||| || ||||||||| |||||| |
|
|
| T |
18088 |
ttaattctgtttgtaatgtgatgtccagaatgaaaacttaacctatgttgttgctgtgatcatgaattgattg-aaatttggattgattggataaattga |
17990 |
T |
|
| Q |
200 |
tgaatttgtgtatgatg |
216 |
Q |
| |
|
||||| | ||||||||| |
|
|
| T |
17989 |
tgaatatttgtatgatg |
17973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0456 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0456
Description:
Target: scaffold0456; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 889 - 806
Alignment:
| Q |
120 |
atgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaat |
204 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||| |
|
|
| T |
889 |
atgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattg-gaattatgagggattggataaattgatgaat |
806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0456; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 8034 - 7951
Alignment:
| Q |
120 |
atgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaat |
204 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||| |
|
|
| T |
8034 |
atgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattg-gaattatgagggattggataaattgatgaat |
7951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0154 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0154
Description:
Target: scaffold0154; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 30875 - 30802
Alignment:
| Q |
1 |
ctataatttctgaaaattgacctagtggcatagttttgaaagaataaattgggggttagggtttgatgacgatt |
74 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| ||| |||||| || |||||||||||||| |||| |
|
|
| T |
30875 |
ctataatttctgaaaattgacctaattgcatagttttggaaggtaaaattgaggattagggtttgatgatgatt |
30802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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