View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4223_high_18 (Length: 297)
Name: NF4223_high_18
Description: NF4223
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4223_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 15 - 286
Target Start/End: Complemental strand, 46301372 - 46301098
Alignment:
| Q |
15 |
aaaaataataatgaaccagtaaatttctttaatcaaggaaatccggtagagaagacgagagat------ctcaaacaataaaaagaaaaaccttcttcac |
108 |
Q |
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| T |
46301372 |
aaaaataataatgaaccagtaaatttctttaatcaaggaaatccggtagagaagacgagagatatcaatctcaaacaataaaaagaaaaaccctctccac |
46301273 |
T |
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| Q |
109 |
cgtattttcctagattnnnnnnnttgaatggatcaaaagaaaacacgaaacagcaacgaaaaccctaataactagctatgaggcaagagagaggccgggc |
208 |
Q |
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| T |
46301272 |
cgtattttcctagattaaaaaaattgaatggatcaaaagaaaacacgagacagcaacgaaaaccctaa---ctagctatgaggcaagagagaggccgggc |
46301176 |
T |
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| Q |
209 |
agtggggtatttaaagagatttgtattgctagggttacatgggatgaatcttgtgacaacgaaacccgttctattctt |
286 |
Q |
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| T |
46301175 |
agtggggtatttaaagagatttgtattgctagggttacatgggatgaatcttgtgacaacgaaacccgttctattctt |
46301098 |
T |
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