View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4225_low_19 (Length: 250)
Name: NF4225_low_19
Description: NF4225
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4225_low_19 |
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Alignment Details
Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 32852387 - 32852155
Alignment:
| Q |
1 |
catgcttcaaattcaaaatcacccgagtaataacatactttgaacttgcagctgttgaaaaagaataatagcatagtgcagtgttacactgtggttgtgc |
100 |
Q |
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| T |
32852387 |
catgcttcaaattcaaaatcacccgagtaataacatactttgaacttgcagctgttgaaaaagaataatagcatagtgcagtgttacactgtggttgtgc |
32852288 |
T |
|
| Q |
101 |
tacatctagtcatggtctcaaatgtcgcattgcatctatg-tatatattgttaccaaattgtttaattcttaggtttatgccttcagtaaatgatgtacc |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32852287 |
tacatctagtcatggtctcaaatgtcgcattgcatctatgttatatattgttaccaaattgtttaattcttaggtttatgccttcagtaaatgatgtacc |
32852188 |
T |
|
| Q |
200 |
tagggaagtgaagccaataactttatttgctca |
232 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
32852187 |
tagggaagtgaagccaataactttatttgctca |
32852155 |
T |
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