View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4226-Insertion-19 (Length: 439)
Name: NF4226-Insertion-19
Description: NF4226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4226-Insertion-19 |
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Alignment Details
Target: chr7 (Bit Score: 345; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 7 - 415
Target Start/End: Complemental strand, 25523821 - 25523400
Alignment:
| Q |
7 |
aaaaagagagtattgtttctcaatttttctctaaatttttccttcctctcttcaaagcactcttattttctgcctccaaactcaaaaaagagatgtagct |
106 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25523821 |
aaaaagagagtattgtttctgaatttttctctaaatttttccttcctctcttcaaagcactcttattttctgcctccaaactcaaaaaagagatgtagct |
25523722 |
T |
|
| Q |
107 |
agctaccaccgcaaccgattgctacttttccagagttcaccctgtgccaaaatcctatgtgtcatgacatgccattttcacagtggcacatttgtaccgt |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25523721 |
agctaccaccgcaaccgattgctacttttccagagttcaccctgtgccaaaatcctatgtgtcatgacatgccattttcacagtggcacatttgtaccgt |
25523622 |
T |
|
| Q |
207 |
gtcatctttgtccttaagccacacatgttgcacgtgtc-----------------cttcataatttttcataaactggttccatctagattttcccaatt |
289 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25523621 |
gtcatctttgtccttaagccacacatgttgcacgtgtccatcatagttcttagcacttcataatttttcataaactggttccatctagattttcccaatt |
25523522 |
T |
|
| Q |
290 |
aaacttgttgtattaattaattgccatgcattagtttactactttccatgcacgttttgcattctataaataaaaccatatatgaaactttctttttctc |
389 |
Q |
| |
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||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25523521 |
aaaattgttgt----attaattgccatgcattagtttactactttccatgcacgttttgcattctataaataaaaccatatatgaaactttctttttctc |
25523426 |
T |
|
| Q |
390 |
tatcctatcttatcttgtgaacaatc |
415 |
Q |
| |
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|||||||||||||||||||||||||| |
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| T |
25523425 |
tatcctatcttatcttgtgaacaatc |
25523400 |
T |
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