View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4226-Insertion-48 (Length: 103)
Name: NF4226-Insertion-48
Description: NF4226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4226-Insertion-48 |
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| [»] chr7 (2 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 93; Significance: 8e-46; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 93; E-Value: 8e-46
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 47072213 - 47072117
Alignment:
| Q |
7 |
acccagtaccattaattattgaaagtaagaatccaatgcttcatattcataatagggtatcagttacaaataattctacttctaccaccttcatctg |
103 |
Q |
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| T |
47072213 |
acccagtaccattaattattgaaagtaagaatccattgcttcatattcataatagggtatcagttacaaataattctacttctaccaccttcatctg |
47072117 |
T |
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Target: chr7; HSP #2
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 33598290 - 33598227
Alignment:
| Q |
7 |
acccagtaccattaattattgaaagtaagaatccaatgcttcatattcataatagggtatcagt |
70 |
Q |
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||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||| |
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| T |
33598290 |
acccagtaccattcattattgaaagtaagaaagcgttgcttcatattcataatagggtatcagt |
33598227 |
T |
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