View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4226-Insertion-7 (Length: 715)
Name: NF4226-Insertion-7
Description: NF4226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4226-Insertion-7 |
 |  |
|
| [»] scaffold0649 (1 HSPs) |
 |  |  |
|
| [»] scaffold0707 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr8 (Bit Score: 399; Significance: 0; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 125 - 684
Target Start/End: Original strand, 11345639 - 11346185
Alignment:
| Q |
125 |
cctaatggttcagttccaacactgaaattcaaaccgcatagctgatggtctcgagtcccaaaagctctagttcctgttctcatggcagggttgcatacac |
224 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11345639 |
cctaatgtttcagttccaacactgaaattcaaaccgcatagctgactgtctcgagtcccaaacgctctagttcctgttctcatggcagggttgcatacac |
11345738 |
T |
 |
| Q |
225 |
aaaaccaatacttacgataccctgtgttatatgaactgatcagaaagcacagtaattcgttgcaagaattaacaacctggcagccgcagttataaaaagt |
324 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |
|
|
| T |
11345739 |
gaaaccaatacttacaataccttgtgttatatgaactgatcagaaagcacagtaatccgttgcaagaattaacaacctggcc---------------agt |
11345823 |
T |
 |
| Q |
325 |
gcagccatggcaatagtcgccggaaagagtgatgaacggattcttaaacaaacgagctacaggtagggattggactggaccaataaggcacctccaatct |
424 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
11345824 |
gcaaccatggcaatagtcgccggaaagagtgatgaacgaattcttaaacaaacgagctacaggtagggattggactagaccaataaggcacctctaatct |
11345923 |
T |
 |
| Q |
425 |
ttgggtatgaggcgtgggtggttctgagatgactttttaaggtgtttttggacgaagggtggatcggagatgagagtgttccatgacttgctcacgcatt |
524 |
Q |
| |
|
| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11345924 |
tcgagtatgaggcgtgggtggttctgagatgactttttaaggtgtttttggacgaagggtggatcggagatgagagtgttccatgacttgctcacgcatt |
11346023 |
T |
 |
| Q |
525 |
tgaattggacaagggttttcacgttaagtaatgataggatttcggctatgagatcgtcgggaaggaacactggtggtaatggtaacttattctttttcat |
624 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
11346024 |
tgaattggacaatggttttcacgttaagtaatgataggatttcggctatgagatcggtgggaaggaacacaggtggtaatggtaacttattctttttcat |
11346123 |
T |
 |
| Q |
625 |
cccacctttccttcttct---tcatcatcatcatcaacttgtaataccttgttatcttcttca |
684 |
Q |
| |
|
| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11346124 |
-gttcttttccttcttcttcatcatcatcatcatcaacttgtaataccttgttatcttcttca |
11346185 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 11345291 - 11345409
Alignment:
| Q |
8 |
gaaaggtcaagggaaacaatcttgaattgatcaacatgagtaatagacttgtgatcataaaaaggataaaaatagttttcaatagccaaccagttaatag |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
11345291 |
gaaaggtcaagggaaacaatcttgaattgatcaacatgagtaatagacttgtgttcataaaaaggataaaaatagttttcaatagccaaccagtaaatag |
11345390 |
T |
 |
| Q |
108 |
tgcctctcaaatacgcacc |
126 |
Q |
| |
|
|||||||||||||| |||| |
|
|
| T |
11345391 |
tgcctctcaaatacacacc |
11345409 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 8 - 120
Target Start/End: Original strand, 11338766 - 11338877
Alignment:
| Q |
8 |
gaaaggtcaagggaaacaatcttgaattgatcaacatgagtaatagacttgtgatcataaaaaggataaaaatagttttcaatagccaaccagttaatag |
107 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
11338766 |
gaaagatcaagggaaacaatcttgaattgatcaacatgagtaatagacttgtgat-ataaaaaggataaaaatagttttgaatagccaaccagtaaatag |
11338864 |
T |
 |
| Q |
108 |
tgcctctcaaata |
120 |
Q |
| |
|
||||||||||||| |
|
|
| T |
11338865 |
tgcctctcaaata |
11338877 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 11339615 - 11339727
Alignment:
| Q |
14 |
tcaagggaaacaatcttgaattgatcaacatgagtaatagacttgtgatcataaaaaggataaaaatagttttcaatagccaaccagttaatagtgcctc |
113 |
Q |
| |
|
||||||||||| |||||||||||||||||| |||||||||||| | ||||| |||||| |||||||| || | |||||||||||||| ||||||||| | |
|
|
| T |
11339615 |
tcaagggaaaccatcttgaattgatcaacacgagtaatagactcataatcatgaaaagggtaaaaataattctgaatagccaaccagtaaatagtgccac |
11339714 |
T |
 |
| Q |
114 |
tcaaatacgcacc |
126 |
Q |
| |
|
| ||||| ||||| |
|
|
| T |
11339715 |
ttaaatatgcacc |
11339727 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 11359169 - 11359287
Alignment:
| Q |
8 |
gaaaggtcaagggaaacaatcttgaattgatcaacatgagtaatagacttgtgatcataaaaaggataaaaatagttttcaatagccaaccagttaatag |
107 |
Q |
| |
|
||||| |||||||| ||||||||||| ||||||||||||||||||| | | | |||||||||||||||||||||| | |||||| ||| ||| ||||| |
|
|
| T |
11359169 |
gaaagatcaagggagacaatcttgaactgatcaacatgagtaatagccccataaccataaaaaggataaaaatagttctgaatagctaactagtaaatag |
11359268 |
T |
 |
| Q |
108 |
tgcctctcaaatacgcacc |
126 |
Q |
| |
|
|||| ||||||||| |||| |
|
|
| T |
11359269 |
tgccgctcaaatacacacc |
11359287 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 459 - 593
Target Start/End: Original strand, 11359857 - 11359991
Alignment:
| Q |
459 |
ttttaaggtgtttttggacgaagggtggatcggagatgagagtgttccatgacttgctcacgcatttgaattggacaagggttttcacgttaagtaatga |
558 |
Q |
| |
|
||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||| ||| ||| | ||| || ||||||||||| ||| | ||| |
|
|
| T |
11359857 |
ttttaagttgtttttggacgaaggtcggatcagagatgagagtgttccatgacttgctcagacatatgagtcggagaatggttttcacgtcaaggagtga |
11359956 |
T |
 |
| Q |
559 |
taggatttcggctatgagatcgtcgggaaggaaca |
593 |
Q |
| |
|
|||||||| || ||||| || || |||||||||| |
|
|
| T |
11359957 |
taggatttgagcgatgagttcctcaggaaggaaca |
11359991 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 62; Significance: 2e-26; HSPs: 11)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 455 - 596
Target Start/End: Complemental strand, 15507990 - 15507849
Alignment:
| Q |
455 |
gactttttaaggtgtttttggacgaagggtggatcggagatgagagtgttccatgacttgctcacgcatttgaattggacaagggttttcacgttaagta |
554 |
Q |
| |
|
||||| |||||||| |||| || ||||| |||||| || ||||||| |||||||||||||||| |||||||| ||| || | |||||| | |||||| | |
|
|
| T |
15507990 |
gacttcttaaggtgcttttcgatgaaggttggatcagatatgagagctttccatgacttgctcaagcatttgagttgcacgatggtttttatgttaagga |
15507891 |
T |
 |
| Q |
555 |
atgataggatttcggctatgagatcgtcgggaaggaacactg |
596 |
Q |
| |
|
| ||||||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
15507890 |
aggataggacttcggctatgagctcgtcgggaaggaacactg |
15507849 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 465 - 525
Target Start/End: Complemental strand, 24034994 - 24034934
Alignment:
| Q |
465 |
ggtgtttttggacgaagggtggatcggagatgagagtgttccatgacttgctcacgcattt |
525 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
24034994 |
ggtgtttttggacgaagagtggatcggagatgagagcgttccatgacttgctcacgcattt |
24034934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 452 - 529
Target Start/End: Complemental strand, 26236105 - 26236028
Alignment:
| Q |
452 |
gatgactttttaaggtgtttttggacgaagggtggatcggagatgagagtgttccatgacttgctcacgcatttgaat |
529 |
Q |
| |
|
|||||||| ||||| || || | |||||||| |||||| ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
26236105 |
gatgacttcttaagatggttgtcgacgaaggttggatcagagatgagagtgttccaggacttgctcacgcatttgaat |
26236028 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 445 - 529
Target Start/End: Complemental strand, 24001465 - 24001381
Alignment:
| Q |
445 |
gttctgagatgactttttaaggtgtttttggacgaagggtggatcggagatgagagtgttccatgacttgctcacgcatttgaat |
529 |
Q |
| |
|
|||||| |||||||| ||||| || ||||||| |||| |||||||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
24001465 |
gttctgtgatgacttcttaagatgcatttggacaaaggttggatcggagatgaaagtgttccatgacttgctcagacatttgaat |
24001381 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 119
Target Start/End: Complemental strand, 24031135 - 24031024
Alignment:
| Q |
8 |
gaaaggtcaagggaaacaatcttgaattgatcaacatgagtaatagacttgtgatcataaaaaggataaaaatagttttcaatagccaaccagttaatag |
107 |
Q |
| |
|
||||| |||||||||| |||| ||| ||||||||||||||||||| || | ||||||| || ||| ||||||||| | ||||||||| ||| || || |
|
|
| T |
24031135 |
gaaagatcaagggaaataatcacgaagtgatcaacatgagtaatagtctcataatcataacaacgattaaaatagttctgaatagccaatgagtaaacag |
24031036 |
T |
 |
| Q |
108 |
tgcctctcaaat |
119 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
24031035 |
tgccactcaaat |
24031024 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 452 - 518
Target Start/End: Complemental strand, 24009642 - 24009576
Alignment:
| Q |
452 |
gatgactttttaaggtgtttttggacgaagggtggatcggagatgagagtgttccatgacttgctca |
518 |
Q |
| |
|
|||||||| ||||| || ||||||| ||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
24009642 |
gatgacttcttaagatgcatttggacaaagtttggatcggagatgaaagtgttccatgacttgctca |
24009576 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 529
Target Start/End: Complemental strand, 26217149 - 26217104
Alignment:
| Q |
484 |
tggatcggagatgagagtgttccatgacttgctcacgcatttgaat |
529 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||||| ||||||| |
|
|
| T |
26217149 |
tggatcggagatgagagtgttccaggatttgctcacgcttttgaat |
26217104 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 529
Target Start/End: Complemental strand, 26229399 - 26229354
Alignment:
| Q |
484 |
tggatcggagatgagagtgttccatgacttgctcacgcatttgaat |
529 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||||| ||||||| |
|
|
| T |
26229399 |
tggatcggagatgagagtgttccaggatttgctcacgcttttgaat |
26229354 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 451 - 567
Target Start/End: Complemental strand, 23992813 - 23992697
Alignment:
| Q |
451 |
agatgactttttaaggtgtttttggacgaagggtggatcggagatgagagtgttccatgacttgctcacgcatttgaattggacaagggttttcacgtta |
550 |
Q |
| |
|
|||||| || |||||||| |||| ||| |||| ||||||||| |||| |||| |||||||||||||| ||| |||| ||| |||| | |||| || || |
|
|
| T |
23992813 |
agatgaattcttaaggtgcttttcgacaaaggttggatcggatatgatagtgaaccatgacttgctcaggcacttgagttgcacaatgtttttaacccta |
23992714 |
T |
 |
| Q |
551 |
agtaatgataggatttc |
567 |
Q |
| |
|
|| || ||||||||||| |
|
|
| T |
23992713 |
agaaaagataggatttc |
23992697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 493 - 529
Target Start/End: Complemental strand, 26256015 - 26255979
Alignment:
| Q |
493 |
gatgagagtgttccatgacttgctcacgcatttgaat |
529 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
26256015 |
gatgagagtgttccaagacttgctcacgcatttgaat |
26255979 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 19357716 - 19357683
Alignment:
| Q |
88 |
aatagccaaccagttaatagtgcctctcaaatac |
121 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
19357716 |
aatagccaaccagttaatagtgcctctcacatac |
19357683 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 484 - 576
Target Start/End: Complemental strand, 36339342 - 36339250
Alignment:
| Q |
484 |
tggatcggagatgagagtgttccatgacttgctcacgcatttgaattggacaagggttttcacgttaagtaatgataggatttcggctatgag |
576 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| || |||||| | |||| |||||||||| ||||||| ||||||||||||| ||||| |
|
|
| T |
36339342 |
tggatctgagatgagagtgttccatgacttgctcacacacttgaatcgcacaatggttttcacgctaagtaacaataggatttcggcgatgag |
36339250 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 455 - 552
Target Start/End: Complemental strand, 23839961 - 23839864
Alignment:
| Q |
455 |
gactttttaaggtgtttttggacgaagggtggatcggagatgagagtgttccatgacttgctcacgcatttgaattggacaagggttttcacgttaag |
552 |
Q |
| |
|
||||| ||||||| ||||| ||| ||| |||||||||||||||||||||||||||||||||||| ||||||||| | | | ||||||||||||||| |
|
|
| T |
23839961 |
gacttgttaaggtattttttgacataggctggatcggagatgagagtgttccatgacttgctcacacatttgaatcgcaagatggttttcacgttaag |
23839864 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 466 - 529
Target Start/End: Original strand, 23847976 - 23848039
Alignment:
| Q |
466 |
gtgtttttggacgaagggtggatcggagatgagagtgttccatgacttgctcacgcatttgaat |
529 |
Q |
| |
|
|||||||| ||| |||| |||||||||||||||||||||||| ||||||||||| || |||||| |
|
|
| T |
23847976 |
gtgttttttgacaaaggttggatcggagatgagagtgttccacgacttgctcacacaattgaat |
23848039 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 45; Significance: 3e-16; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 455 - 587
Target Start/End: Original strand, 19747505 - 19747637
Alignment:
| Q |
455 |
gactttttaaggtgtttttggacgaagggtggatcggagatgagagtgttccatgacttgctcacgcatttgaattggacaagggttttcacgttaagta |
554 |
Q |
| |
|
||||| || ||||||||||| ||||||| | ||| |||||||| |||||||||||||||||| ||||| ||||| | | ||||||||||||||| | |
|
|
| T |
19747505 |
gacttcttgaggtgtttttgtacgaaggtcgaatcattgatgagagagttccatgacttgctcacacattttaattgcatgatggttttcacgttaagaa |
19747604 |
T |
 |
| Q |
555 |
atgataggatttcggctatgagatcgtcgggaa |
587 |
Q |
| |
|
| ||||||||||| || || || |||||||||| |
|
|
| T |
19747605 |
aggataggatttctgcgataagttcgtcgggaa |
19747637 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 484 - 587
Target Start/End: Complemental strand, 5978254 - 5978151
Alignment:
| Q |
484 |
tggatcggagatgagagtgttccatgacttgctcacgcatttgaattggacaagggttttcacgttaagtaatgataggatttcggctatgagatcgtcg |
583 |
Q |
| |
|
||||| ||||||||||||||||||||||||| ||||||| |||||| | | | |||||||||| |||| || |||||||||||| | ||||| ||||| |
|
|
| T |
5978254 |
tggattggagatgagagtgttccatgacttgttcacgcacttgaatcgtgcgatggttttcacgctaaggaacgataggatttcgacgatgagttcgtca |
5978155 |
T |
 |
| Q |
584 |
ggaa |
587 |
Q |
| |
|
|||| |
|
|
| T |
5978154 |
ggaa |
5978151 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 581
Target Start/End: Complemental strand, 33568109 - 33568012
Alignment:
| Q |
484 |
tggatcggagatgagagtgttccatgacttgctcacgcatttgaattggacaagggttttcacgttaagtaatgataggatttcggctatgagatcgt |
581 |
Q |
| |
|
||||||||||||||| | ||||||||| ||||| ||||| |||||||| | ||| |||||| |||| || || |||||||| |||||||| |||| |
|
|
| T |
33568109 |
tggatcggagatgagcgagttccatgatttgcttacgcacttgaattgtgtgatggtcttcacgctaagaaaagaaaggatttcagctatgagttcgt |
33568012 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 484 - 529
Target Start/End: Complemental strand, 23085967 - 23085922
Alignment:
| Q |
484 |
tggatcggagatgagagtgttccatgacttgctcacgcatttgaat |
529 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
23085967 |
tggatcggagacgagagtgttccatgacttgcttacgcatttgaat |
23085922 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 573
Target Start/End: Original strand, 17954530 - 17954619
Alignment:
| Q |
484 |
tggatcggagatgagagtgttccatgacttgctcacgcatttgaattggacaagggttttcacgttaagtaatgataggatttcggctat |
573 |
Q |
| |
|
||||||||||| |||||| |||||||| |||| |||||||||| ||| | | ||||| ||| ||||| || ||||||||||||||||| |
|
|
| T |
17954530 |
tggatcggagacgagagttttccatgatttgcaaacgcatttgagttgcaggatggtttccacattaaggaaagataggatttcggctat |
17954619 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0649 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0649
Description:
Target: scaffold0649; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 471 - 570
Target Start/End: Complemental strand, 4702 - 4603
Alignment:
| Q |
471 |
tttggacgaagggtggatcggagatgagagtgttccatgacttgctcacgcatttgaattggacaagggttttcacgttaagtaatgataggatttcggc |
570 |
Q |
| |
|
||||||||||| |||||||||||||| | ||||||||| |||||||| ||||||| || ||| | |||||||| ||| || |||||||||||||| |
|
|
| T |
4702 |
tttggacgaagatgggatcggagatgagtgagttccatgatttgctcacacatttgagtttcgtaagagatttcacgtcaaggaaggataggatttcggc |
4603 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0707 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0707
Description:
Target: scaffold0707; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 581
Target Start/End: Complemental strand, 4503 - 4406
Alignment:
| Q |
484 |
tggatcggagatgagagtgttccatgacttgctcacgcatttgaattggacaagggttttcacgttaagtaatgataggatttcggctatgagatcgt |
581 |
Q |
| |
|
||||||||||||||| | ||||||||| ||||| ||||| |||||||| | ||| |||||| |||| || || |||||||| |||||||| |||| |
|
|
| T |
4503 |
tggatcggagatgagcgagttccatgatttgcttacgcacttgaattgtgtgatggtcttcacgctaagaaaagaaaggatttcagctatgagttcgt |
4406 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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