View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4226_low_12 (Length: 380)
Name: NF4226_low_12
Description: NF4226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4226_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 322; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 19 - 371
Target Start/End: Original strand, 246787 - 247137
Alignment:
| Q |
19 |
aagattgatttataaagtgaaacactgtgagtgttaatttgtatgcatttagaaatggaaaagatttgtagacactataaccattaatctacattctaca |
118 |
Q |
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| T |
246787 |
aagattgatttataaagtgaaacactgtgagtgttaatttgtatgaatttagaaatggaaaagatttgtagacactaaaaccattaatctacattctaca |
246886 |
T |
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| Q |
119 |
ccataaaagagagatggagatataacaatgtcataccaagaaagatataacaaaaaatacgaagtgttaaatgagttattggaaatgaatgtttttaaaa |
218 |
Q |
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| T |
246887 |
ccataa--gagagatggagatataacaatgtcataccaagaaagatataacaaaaaatacgaagtgttgaatgagttattggaaatgaatgtttttaaaa |
246984 |
T |
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| Q |
219 |
gtaccaacattaatggattgatctaattgataaagatataggcttttttaacccaatcaaaagttcgttctcgaataactaaattaaaaaataaagttaa |
318 |
Q |
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| T |
246985 |
gtaccaacactaatggattgatctaattgataaagatataggcttttttaacccaatcaaaagttcgttctcgaataactaaattaaaaaataaagttaa |
247084 |
T |
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| Q |
319 |
gcaatttgtatcatctctgtattcgtgaccttagttcaattgataagaataat |
371 |
Q |
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| T |
247085 |
gcaatttgtatcatctctgtattcgtgaccttagttcaattgatgagaataat |
247137 |
T |
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