View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4226_low_19 (Length: 321)
Name: NF4226_low_19
Description: NF4226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4226_low_19 |
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Alignment Details
Target: chr8 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 20 - 300
Target Start/End: Complemental strand, 37135392 - 37135112
Alignment:
| Q |
20 |
gtatggtgttttcatgaatgcttttccataatcacctaaacttttgaatgaatcttctgggaaaaactcatttcttgctccactgttttctgttcccatg |
119 |
Q |
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| T |
37135392 |
gtatggtgttttcatgaatgcttttccataatcacctaaacttttgaatgaatcttctgggaaaaactcatttcttgctccactgttttctgttcccatg |
37135293 |
T |
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| Q |
120 |
tcctgattcatataatttaatttgatcaatgcaacaacatgcaatgctgttgtaaaaatataatatagtttaaaccaatcttaagagtctataggggaga |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37135292 |
tcctgattcatataatttaatttgatcaatgcaacaacatgcaatgctgttgtaaaaatataatatagtttaaaccaatcttaagagtctataggggaga |
37135193 |
T |
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| Q |
220 |
acaagaattaatatgtgtatgtgctatgagagaatgtgtgtggaatctcttttgagagtgtgagattcttgtgtaatttat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
37135192 |
acaagaattaatatgtgtatgtgctatgagagaatgtgtgtggaatctattttgagagtgtgagattcttgtgtaatttat |
37135112 |
T |
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